Rroxscaffold_1G00044720
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0005645
Physical Location & Seq
Reverse (-)
63722820 .. 63733891
11072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00044720.1

Sequence Viewer

Length: 3294 bp
ATGATGGTATCGGCGTCGCCGTCGATGGTGGCGAGGAGCTCCTTGGAGGAAATGCTGGATTCGCTGCGGCGGAGGGACGAGGCTGAGAAGCCCAAGGAATTGCCGCCGGCATTGCCGTCCCGGCCCACTTCCAAGGCTCGGCTGCCGTCGGCGCGCCGCTCCTTGCCCAACAACTTCAATGCCGAGACCTTAATCCGGTCGCCGGAGTGGGCCCCCAGTGTGAACAAGAGGAAAGAGAGGGATTCCGGGGTCAAGAGATGTAATAATTTTGGTGTCAAGAAGACGGAGAAGGACGCGGTGGAGTCGCCGTACGTTGCGTCGGAGGAGGAGCTCCAGAGCCGGCAAAAGGTGGCGAAGTCCGATTGGGGTGACAACGTTGCTTATTTCATCATGAAGAAACTTAAGGTTTGGTGTCGGGGTCCTAGCGGACAATGGGAGTCAGGAACAATACAATCAACGTCTGGAGATGTGGCATTTGTGTCACTCTCTGGTGGAAACGTAATCAAAGTGCCCAGGGATGAGCTGCTACCAGCAAACCCAGATGTTCTGGAAGGGGTGGATGATCTTGCACAGCTTAGCTATTTAAATGACCCTTCTGTGCTTTGCAATCTTCAGTCTAGATATTCGCAGGACATGATTTATAGCAAAGCAGGGCCAGTTTTGATTGCAATGAATCCTTTCAAAGATGTCCAAATTTGTGGAGATGATTTTGTCACAGCGTATAGGAAGAAACTAGTGGACAAACCTCATGTTTATGCAATAGCAGACGCTGCTTATAATGAGATGATGAGAGATGATGTAAATCAGTCCATAATCATAAGTGGGGAAAGTGGAGCTGGGAAAACAGAGACAGCAAAAATTGCAATGCAATACTTAGCTGCTCTTGGTGGTGGGAGTTGTGGCGTGGAACATGCAATCCTTCAGACCAACTGCATACTGGAGGCATTTGGAAATGCAAAATCATCCAGAAATGATAACGCTAGCCGATTTGGGAAGTTGCTTGAAATTCATTTTAGCTCAGTGGGAAAAATTTGTGGTGCTGAAATTCAAACCTTGTTTTTAGAAGAGTCAAGAGTGGCTCGACTGGAAAATGGTGAGAGGTCGTACCATATCTTTTATCAACTTTGTGCTGGTGCTCCATCAATGCTTAAAGAGAGGCTGAATCTGAAAATGGCTAGTGATTACAAGTATCTTAGTCAAGGTGGTTGCTTGGCAATTGATGGTGTAGATGATGCTCAGAAGTTTCACATGCTCATGGAAGCGTTTGCTATTCTTCAAATTTCCGAAGAAGATCAACTACAGGTGTTTTCTGTGCTGGCCGCTGTGTTATGGCTCGGAAACATATCATTTCAAGTAACGGACGATGAAAATCGTGTGGAAGTGTTGGCTGATGAAGCTATAACCACTGCTTCCAGGCTGATGGGATGTAGTGCCCAGGACTTGATGCTAGCTTTATCCACCCATGACAATGCTGTTGAGGATAGTATTGATAAGAGATTGATGTTGCAGCAGGCCACTGATGCAAGGGATGCATTAGCAAAATTTATCTATGTGAGCTTGTTTGACTGGCTTGTAGAACAAATCAACAAGTCTCTTCAAGTGGGAAGATGCTGTACTGGGAGATCCATCAGTATACTTGATATATATGGGTTTGAGTCACTACAGGAATGTGAATTGGATGGGGTTGATTGGACTAAAGTAGATTTTGAAGACAACCAAGAGTGCTTGGATCTCTTTGAGAAGAAACCTTTTGGGCTACTATCCTTGTTGGAAGAGGAATCAAACTGCCCTAAGGCAACTGATTTGACCATTGCTGATACGTTTAAGCAGCACTTGAATGGGAATTCTTGCTTTAAAGCAGAGAGAGGGAGATCTTTCAGTATTCGTCATCATGCTGGAGAGGTTCTATATGACACAAGTGGCTTCTTGGAAAAGAACAGAGATTCTTTGTCCTCTGTTACCATCCAGCTCTTGTCATCATGCAGCAGTCAGCTTCTGCGATTGTTTACCTCCAAAGTGCTTAAGCAAGTCCAGAAACCAGCAGCTACGTCTTGCCAGATGAATGCATTGGACGCTCCAAAACCAAGTGTTGGTATTAAGTTCAAGGCCCAATTATTTAAACTAATGCACCAGTTGGAGAGTAGCACACCTCACTTTGTTCGCTGCATAAAGCCAAATAGTAAGCAGCTTCCCGGTGTGTATGAAGCAGAACTTGTTTTACAACAACTCAGGTGTTCTGGAGTTTCAGAGGTTGTTAGGATATCACGATCTGGATATCCCACTAGAATGACACATCAAGAATTTGCAGGAAGGTATGGGTTCCTGCTTCCAAAGGCCACTGTTGCTAAGGATCCATTAAGTCTATCTATTGCTGTTCTACAACAGTTCAGTTTCCTCCCTGAAATGTACCAAATAGGCTATACGAAAGTGTATCTTCGAACAGGGCAGATTGCTGCATTGGAGGATAAGAGAAGTAAAGTTCTCCGAGGAATAGTTGGTGTTCAAAAGTATTTCCGTGGTTACTGGGCTCGTCGTCATTTTCATCAAATTAAGGAAGGAACCACAAAATTACAATCAAATGTTCCTGGTGGAAATGCTGGAAGGAAAGCTGATGCTCTAAAAACTAGACGGAAATCCAGCAGGAAGAGTTCTGAAGTGAAGGACATGCCTTCAGAATTAGAACAACTACGCAGGCGAGTGCTTCAGGCTGAGGCAACTCTGGAGCGAAAGGAAGAGGAAAATGCTGAGTTGCAGGAGCAGCTACAACAGTTTGAAACAAGATGGTCAGATTACGAGGCAAAGATGAAATCAATGCAGGATGTCTGGCAAAAGCAGATGGCATCTTTGCAAGTGAGTCTTTCTGCAGCCAGAAAGAGTCTTACTTCTGGCAATACAGCTTGTCAACCTGGAAGAGTAGATGTTGCTTGTCAACCTGGAAGAGTAGATGTTTGTTCACCTCGATATGATTCGGAAGATGCGCTCTCAATGGGATCTCGGACTCCTGGTGCAAGCACACCTATCAATGGGGTAGCACGTGAGACAAATGGTACTTTGAATGCTGTCGGAAATTTGGTGAAGGAATTTGATCAACAGAGACAAACTTTTGATGATGAAGTGAAAGCTCTGATTGAAGTAAAACCTGGGCATCCTGATGAAGAACTAAGGAAACTTAAACACCGGTTCGAGTCATGGAAGAAAGAGTACAAGGCAAGATTACGAGAGACAAAGACAAAGCTCCATAAACATGGGCATTCAGAAGAGGAAAAGAGGCGAAAGAAATGGTGGGTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000146 GO:0000166 GO:0000278 GO:0000281 GO:0000302 GO:0000910 GO:0001891 GO:0001931 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005826 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006971 GO:0006979 GO:0006996 GO:0007010 GO:0007015 GO:0007033 GO:0007049 GO:0007154 GO:0008064 GO:0008092 GO:0008104 GO:0008144 GO:0008150 GO:0008360 GO:0009267 GO:0009506 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009636 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010243 GO:0010639 GO:0012505 GO:0014070 GO:0014074 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016459 GO:0016460 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030038 GO:0030048 GO:0030054 GO:0030139 GO:0030554 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0030898 GO:0031033 GO:0031034 GO:0031152 GO:0031154 GO:0031254 GO:0031268 GO:0031270 GO:0031333 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032009 GO:0032060 GO:0032153 GO:0032155 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032796 GO:0032956 GO:0032970 GO:0032982 GO:0032991 GO:0033036 GO:0033043 GO:0033275 GO:0033298 GO:0033554 GO:0034461 GO:0034622 GO:0035639 GO:0036094 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042542 GO:0042594 GO:0042623 GO:0042641 GO:0042802 GO:0042803 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0044877 GO:0045177 GO:0045179 GO:0045335 GO:0046677 GO:0046683 GO:0046847 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051179 GO:0051301 GO:0051493 GO:0051494 GO:0051591 GO:0051606 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0055044 GO:0060327 GO:0060328 GO:0061572 GO:0061640 GO:0065003 GO:0065007 GO:0065008 GO:0070252 GO:0070938 GO:0071496 GO:0071840 GO:0071889 GO:0071944 GO:0090066 GO:0090702 GO:0097159 GO:0097204 GO:0097367 GO:0097435 GO:0097708 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0110053 GO:0120025 GO:0120031 GO:0120036 GO:1901265 GO:1901363 GO:1901698 GO:1901700 GO:1902903 GO:1902904 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ Myosin_N Myosin_head

Protein Analysis

1097

Amino Acids

122.92

Weight (kDa)

8.32

Isoelectric Point (pI)

49.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_VIII-1_N PF25369 134 - 178 2.8e-18 Myosin-1-like, N-terminal SH3 domain
Myosin_head PF00063 186 - 555 3e-127 Myosin head (motor domain)
Myosin_head PF00063 560 - 813 6.7e-66 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 777
AccB7I CCANNNNNTGG 1 cut(s) 2090
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 1 cut(s) 1633
AccII CGCG 2 cut(s) 154, 296
AciI CCGC 7 cut(s) 67, 70, 104, 157, 296, 426, 1320
AclI AACGTT 1 cut(s) 375
AclWI GGATC 5 cut(s) 1617, 1737, 2345, 2358, 2998
AcoI YGGCCR 1 cut(s) 1317
AcuI CTGAAG 5 cut(s) 596, 905, 2655, 2673, 2687
AcvI CACGTG 1 cut(s) 3035
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 6 cut(s) 311, 1106, 1615, 2408, 3049, 3203
AfiI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 2090, 3023
AflII CTTAAG 2 cut(s) 401, 2021
AgeI ACCGGT 1 cut(s) 3177
AhlI ACTAGT 1 cut(s) 733
AjnI CCWGG 8 cut(s) 512, 1412, 1434, 2584, 2905, 2932, 3001, 3139
AloI GAACNNNNNNTCC 2 cut(s) 900, 932
Alw21I GWGCWC 3 cut(s) 41, 333, 1138
Alw26I GTCTC 6 cut(s) 179, 842, 1596, 3032, 3088, 3215
AlwI GGATC 5 cut(s) 1617, 1737, 2345, 2358, 2998
AlwNI CAGNNNCTG 2 cut(s) 770, 1996
AoxI GGCC 7 cut(s) 122, 210, 653, 1317, 1512, 2106, 2334
ApaI GGGCCC 1 cut(s) 214
AscI GGCGCGCC 1 cut(s) 152
AsiGI ACCGGT 1 cut(s) 3177
Asp700I GAANNNNTTC 1 cut(s) 677
AspLEI GCGC 3 cut(s) 154, 156, 2980
AspS9I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2107
AsuC2I CCSGG 3 cut(s) 121, 247, 2193
AsuHPI GGTGA 4 cut(s) 380, 1106, 2946, 3085
AsuII TTCGAA 1 cut(s) 2437
AsuNHI GCTAGC 2 cut(s) 980, 1447
AvaII GGWCC 1 cut(s) 419
AxyI CCTNAGG 1 cut(s) 1791
BaeGI GKGCMC 3 cut(s) 214, 513, 1435
BamHI GGATCC 1 cut(s) 2350
BanII GRGCYC 4 cut(s) 41, 214, 333, 2530
BarI GAAGNNNNNNTAC 6 cut(s) 1281, 1313, 1597, 1629, 3185, 3217
BbrPI CACGTG 1 cut(s) 3035
BbsI GAAGAC 2 cut(s) 287, 1716
Bbv12I GWGCWC 3 cut(s) 41, 333, 1138
BbvCI CCTCAGC 1 cut(s) 2709
BccI CCATC 9 cut(s) 19, 1147, 1214, 1414, 1634, 1673, 1970, 2775, 2830
BceAI ACGGC 4 cut(s) 4, 100, 130, 292
BciT130I CCWGG 8 cut(s) 514, 1414, 1436, 2586, 2907, 2934, 3003, 3141
BclI TGATCA 1 cut(s) 3085
BcnI CCSGG 3 cut(s) 121, 247, 2193
BcoDI GTCTC 6 cut(s) 179, 842, 1596, 3032, 3088, 3215
BcuI ACTAGT 1 cut(s) 733
BfaI CTAG 9 cut(s) 423, 618, 734, 981, 1176, 1448, 2283, 2625, 3292
BfmI CTRYAG 3 cut(s) 1298, 1661, 2862
BfrI CTTAAG 2 cut(s) 401, 2021
BglI GCCNNNNNGGC 1 cut(s) 121
BglII AGATCT 1 cut(s) 1871
BlpI GCTNAGC 1 cut(s) 575
Bme18I GGWCC 1 cut(s) 419
BmgT120I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2107
BmiI GGNNCC 6 cut(s) 212, 213, 420, 2321, 2352, 2560
BmrI ACTGGG 3 cut(s) 210, 1626, 2533
BmsI GCATC 9 cut(s) 1222, 1434, 1510, 1519, 1598, 2602, 2849, 2965, 3154
BmtI GCTAGC 2 cut(s) 984, 1451
BmuI ACTGGG 3 cut(s) 210, 1626, 2533
BpiI GAAGAC 2 cut(s) 287, 1716
BpmI CTGGAG 6 cut(s) 317, 483, 959, 1917, 2259, 2741
Bpu10I CCTNAGC 2 cut(s) 2346, 2709
Bpu1102I GCTNAGC 1 cut(s) 575
Bpu14I TTCGAA 1 cut(s) 2437
BpuMI CCSGG 3 cut(s) 121, 247, 2193
BsaAI YACGTR 1 cut(s) 3035
BsaBI GATNNNNATC 2 cut(s) 801, 1368
BsaHI GRCGYC 1 cut(s) 14
BsaI GGTCTC 1 cut(s) 179
BsaWI WCCGGW 2 cut(s) 195, 3177
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 2090, 3023
Bse118I RCCGGY 3 cut(s) 106, 339, 3177
Bse1I ACTGG 8 cut(s) 216, 656, 942, 1089, 1571, 1621, 2131, 2528
Bse21I CCTNAGG 1 cut(s) 1791
Bse3DI GCAATG 4 cut(s) 110, 675, 870, 1809
Bse8I GATNNNNATC 2 cut(s) 801, 1368
BseBI CCWGG 8 cut(s) 514, 1414, 1436, 2586, 2907, 2934, 3003, 3141
BseGI GGATG 9 cut(s) 523, 565, 962, 1430, 1534, 1684, 1962, 2824, 3145
BseJI GATNNNNATC 2 cut(s) 801, 1368
BseLI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 2090, 3023
BseMI GCAATG 4 cut(s) 110, 675, 870, 1809
BseMII CTCAG 6 cut(s) 75, 1032, 1250, 2242, 2700, 2736
BseNI ACTGG 8 cut(s) 216, 656, 942, 1089, 1571, 1621, 2131, 2528
BsePI GCGCGC 1 cut(s) 152
BseRI GAGGAG 3 cut(s) 49, 338, 341
BseSI GKGCMC 3 cut(s) 214, 513, 1435
BseYI CCCAGC 1 cut(s) 836
Bsh1236I CGCG 2 cut(s) 154, 296
Bsh1285I CGRYCG 1 cut(s) 200
BshFI GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2108, 2336
BshTI ACCGGT 1 cut(s) 3177
BsiEI CGRYCG 1 cut(s) 200
BsiHKAI GWGCWC 3 cut(s) 41, 333, 1138
BsiSI CCGG 8 cut(s) 107, 121, 196, 203, 246, 340, 2193, 3178
BsiWI CGTACG 1 cut(s) 309
BslFI GGGAC 2 cut(s) 89, 103
BslI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 2090, 3023
BsmAI GTCTC 6 cut(s) 179, 842, 1596, 3032, 3088, 3215
BsmFI GGGAC 2 cut(s) 89, 103
BsmI GAATGC 3 cut(s) 2068, 3061, 3250
BsnI GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2108, 2336
Bso31I GGTCTC 1 cut(s) 179
Bsp119I TTCGAA 1 cut(s) 2437
Bsp120I GGGCCC 1 cut(s) 210
Bsp1286I GDGCHC 7 cut(s) 41, 214, 333, 513, 1138, 1435, 2530
Bsp143I GATC 9 cut(s) 562, 1291, 1622, 1729, 1871, 2267, 2350, 2990, 3085
Bsp1720I GCTNAGC 1 cut(s) 575
BspACI CCGC 7 cut(s) 67, 70, 104, 157, 296, 426, 1320
BspANI GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2108, 2336
BspCNI CTCAG 6 cut(s) 76, 1031, 1249, 2241, 2701, 2737
BspFNI CGCG 2 cut(s) 154, 296
BspHI TCATGA 1 cut(s) 390
BspLI GGNNCC 6 cut(s) 212, 213, 420, 2321, 2352, 2560
BspMAI CTGCAG 1 cut(s) 2866
BspOI GCTAGC 2 cut(s) 984, 1451
BspPI GGATC 5 cut(s) 1617, 1737, 2345, 2358, 2998
BspT104I TTCGAA 1 cut(s) 2437
BspTI CTTAAG 2 cut(s) 401, 2021
BspTNI GGTCTC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 4 cut(s) 110, 675, 870, 1809
BsrFI RCCGGY 3 cut(s) 106, 339, 3177
BsrI ACTGG 8 cut(s) 216, 656, 942, 1089, 1571, 1621, 2131, 2528
BssAI RCCGGY 3 cut(s) 106, 339, 3177
BssHII GCGCGC 1 cut(s) 152
BssMI GATC 9 cut(s) 562, 1291, 1622, 1729, 1871, 2267, 2350, 2990, 3085
BssNAI GTATAC 1 cut(s) 1634
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 3 cut(s) 42, 93, 132
Bst1107I GTATAC 1 cut(s) 1634
Bst2UI CCWGG 8 cut(s) 514, 1414, 1436, 2586, 2907, 2934, 3003, 3141
Bst4CI ACNGT 3 cut(s) 2341, 2385, 2769
Bst6I CTCTTC 8 cut(s) 1059, 1599, 1767, 2639, 2727, 2905, 2932, 3252
BstACI GRCGYC 1 cut(s) 14
BstAFI CTTAAG 2 cut(s) 401, 2021
BstAPI GCANNNNNTGC 3 cut(s) 770, 860, 1529
BstBAI YACGTR 1 cut(s) 3035
BstBI TTCGAA 1 cut(s) 2437
BstC8I GCNNGC 9 cut(s) 108, 154, 341, 982, 1317, 1449, 1512, 2693, 3010
BstDSI CCRYGG 1 cut(s) 2515
BstF5I GGATG 9 cut(s) 523, 565, 962, 1430, 1534, 1684, 1962, 2824, 3145
BstFNI CGCG 2 cut(s) 154, 296
BstHHI GCGC 3 cut(s) 154, 156, 2980
BstKTI GATC 9 cut(s) 565, 1294, 1625, 1732, 1874, 2270, 2353, 2993, 3088
BstMAI GTCTC 6 cut(s) 179, 842, 1596, 3032, 3088, 3215
BstMBI GATC 9 cut(s) 562, 1291, 1622, 1729, 1871, 2267, 2350, 2990, 3085
BstMCI CGRYCG 1 cut(s) 200
BstNI CCWGG 8 cut(s) 514, 1414, 1436, 2586, 2907, 2934, 3003, 3141
BstNSI RCATGY 3 cut(s) 914, 1252, 2668
BstSFI CTRYAG 3 cut(s) 1298, 1661, 2862
BstSLI GKGCMC 3 cut(s) 214, 513, 1435
BstUI CGCG 2 cut(s) 154, 296
BstV2I GAAGAC 2 cut(s) 287, 1716
BstX2I RGATCY 5 cut(s) 1622, 1729, 1871, 2350, 2990
BstXI CCANNNNNNTGG 3 cut(s) 698, 1420, 3245
BstYI RGATCY 5 cut(s) 1622, 1729, 1871, 2350, 2990
BstZ17I GTATAC 1 cut(s) 1634
Bsu36I CCTNAGG 1 cut(s) 1791
BsuRI GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2108, 2336
BtgI CCRYGG 1 cut(s) 2515
BtsCI GGATG 9 cut(s) 523, 565, 962, 1430, 1534, 1684, 1962, 2824, 3145
BtsI GCAGTG 1 cut(s) 1404
BtsIMutI CAGTG 5 cut(s) 223, 1026, 1404, 1515, 2337
Cac8I GCNNGC 9 cut(s) 108, 154, 341, 982, 1317, 1449, 1512, 2693, 3010
CaiI CAGNNNCTG 2 cut(s) 770, 1996
CciI TCATGA 1 cut(s) 390
CfoI GCGC 3 cut(s) 154, 156, 2980
Cfr10I RCCGGY 3 cut(s) 106, 339, 3177
Cfr13I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2107
CseI GACGC 5 cut(s) 3, 302, 306, 776, 2081
Csp6I GTAC 6 cut(s) 310, 1105, 1614, 2407, 3048, 3202
CspAI ACCGGT 1 cut(s) 3177
CviQI GTAC 6 cut(s) 310, 1105, 1614, 2407, 3048, 3202
DpnI GATC 9 cut(s) 564, 1293, 1624, 1731, 1873, 2269, 2352, 2992, 3087
DpnII GATC 9 cut(s) 562, 1291, 1622, 1729, 1871, 2267, 2350, 2990, 3085
DraI TTTAAA 3 cut(s) 585, 1855, 2119
EaeI YGGCCR 1 cut(s) 1317
Eam1104I CTCTTC 8 cut(s) 1059, 1599, 1767, 2639, 2727, 2905, 2932, 3252
EarI CTCTTC 8 cut(s) 1059, 1599, 1767, 2639, 2727, 2905, 2932, 3252
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 2 cut(s) 39, 331
Eco130I CCWWGG 3 cut(s) 42, 93, 132
Eco24I GRGCYC 4 cut(s) 41, 214, 333, 2530
Eco31I GGTCTC 1 cut(s) 179
Eco32I GATATC 2 cut(s) 2262, 2276
Eco47I GGWCC 1 cut(s) 419
Eco53kI GAGCTC 2 cut(s) 39, 331
Eco57I CTGAAG 5 cut(s) 596, 905, 2655, 2673, 2687
Eco72I CACGTG 1 cut(s) 3035
Eco81I CCTNAGG 1 cut(s) 1791
EcoICRI GAGCTC 2 cut(s) 39, 331
EcoO109I RGGNCCY 2 cut(s) 211, 419
EcoRI GAATTC 1 cut(s) 1843
EcoRII CCWGG 8 cut(s) 512, 1412, 1434, 2584, 2905, 2932, 3001, 3139
EcoRV GATATC 2 cut(s) 2262, 2276
EcoT14I CCWWGG 3 cut(s) 42, 93, 132
EcoT22I ATGCAT 2 cut(s) 1534, 2068
EcoT38I GRGCYC 4 cut(s) 41, 214, 333, 2530
ErhI CCWWGG 3 cut(s) 42, 93, 132
FalI AAGNNNNNCTT 8 cut(s) 1817, 1849, 2196, 2228, 2418, 2450, 2841, 2873
FaqI GGGAC 2 cut(s) 89, 103
FbaI TGATCA 1 cut(s) 3085
FblI GTMKAC 1 cut(s) 1633
FokI GGATG 9 cut(s) 530, 572, 949, 1437, 1541, 1691, 1949, 2831, 3132
FriOI GRGCYC 4 cut(s) 41, 214, 333, 2530
FspBI CTAG 9 cut(s) 423, 618, 734, 981, 1176, 1448, 2283, 2625, 3292
GlaI GCGC 3 cut(s) 153, 155, 2979
GsaI CCCAGC 1 cut(s) 840
GsuI CTGGAG 6 cut(s) 317, 483, 959, 1917, 2259, 2741
HaeIII GGCC 7 cut(s) 124, 212, 655, 1319, 1514, 2108, 2336
HapII CCGG 8 cut(s) 107, 121, 196, 203, 246, 340, 2193, 3178
HgaI GACGC 5 cut(s) 3, 302, 306, 776, 2081
HhaI GCGC 3 cut(s) 154, 156, 2980
Hin1I GRCGYC 1 cut(s) 14
Hin6I GCGC 3 cut(s) 152, 154, 2978
HinP1I GCGC 3 cut(s) 152, 154, 2978
HincII GTYRAC 2 cut(s) 2903, 2930
HindII GTYRAC 2 cut(s) 2903, 2930
HpaII CCGG 8 cut(s) 107, 121, 196, 203, 246, 340, 2193, 3178
HphI GGTGA 4 cut(s) 380, 1106, 2946, 3085
Hpy166II GTNNAC 7 cut(s) 223, 739, 1634, 2007, 2903, 2930, 2954
Hpy8I GTNNAC 7 cut(s) 223, 739, 1634, 2007, 2903, 2930, 2954
Hpy99I CGWCG 5 cut(s) 19, 25, 151, 322, 2535
HpyCH4III ACNGT 3 cut(s) 2341, 2385, 2769
HpyCH4IV ACGT 7 cut(s) 312, 375, 458, 498, 1820, 2048, 3034
HpySE526I ACGT 7 cut(s) 312, 375, 458, 498, 1820, 2048, 3034
Hsp92I GRCGYC 1 cut(s) 14
HspAI GCGC 3 cut(s) 152, 154, 2978
KroI GCCGGC 2 cut(s) 106, 339
KroNI GCCGGC 2 cut(s) 108, 341
Ksp22I TGATCA 1 cut(s) 3085
Kzo9I GATC 9 cut(s) 562, 1291, 1622, 1729, 1871, 2267, 2350, 2990, 3085
LweI GCATC 9 cut(s) 1222, 1434, 1510, 1519, 1598, 2602, 2849, 2965, 3154
MaeI CTAG 9 cut(s) 423, 618, 734, 981, 1176, 1448, 2283, 2625, 3292
MaeII ACGT 7 cut(s) 312, 375, 458, 498, 1820, 2048, 3034
MaeIII GTNAC 7 cut(s) 368, 480, 712, 1354, 1656, 1957, 2519
MalI GATC 9 cut(s) 564, 1293, 1624, 1731, 1873, 2269, 2352, 2992, 3087
MbiI CCGCTC 1 cut(s) 159
MboI GATC 9 cut(s) 562, 1291, 1622, 1729, 1871, 2267, 2350, 2990, 3085
MfeI CAATTG 1 cut(s) 1215
MflI RGATCY 5 cut(s) 1622, 1729, 1871, 2350, 2990
MhlI GDGCHC 7 cut(s) 41, 214, 333, 513, 1138, 1435, 2530
MlyI GAGTC 8 cut(s) 311, 446, 1076, 1664, 2863, 2884, 2992, 3194
MmeI TCCRAC 4 cut(s) 300, 1749, 2115, 3043
Mph1103I ATGCAT 2 cut(s) 1534, 2068
MroNI GCCGGC 2 cut(s) 106, 339
MroXI GAANNNNTTC 1 cut(s) 677
MslI CAYNNNNRTG 7 cut(s) 753, 1253, 1467, 1836, 2285, 3150, 3243
MspA1I CMGCKG 1 cut(s) 1322
MspCI CTTAAG 2 cut(s) 401, 2021
MspI CCGG 8 cut(s) 107, 121, 196, 203, 246, 340, 2193, 3178
MunI CAATTG 1 cut(s) 1215
Mva1269I GAATGC 3 cut(s) 2068, 3061, 3250
MvaI CCWGG 8 cut(s) 514, 1414, 1436, 2586, 2907, 2934, 3003, 3141
MvnI CGCG 2 cut(s) 154, 296
NaeI GCCGGC 2 cut(s) 108, 341
NciI CCSGG 3 cut(s) 121, 247, 2193
NdeII GATC 9 cut(s) 562, 1291, 1622, 1729, 1871, 2267, 2350, 2990, 3085
NgoMIV GCCGGC 2 cut(s) 106, 339
NheI GCTAGC 2 cut(s) 980, 1447
NlaIV GGNNCC 6 cut(s) 212, 213, 420, 2321, 2352, 2560
NmeAIII GCCGAG 2 cut(s) 118, 208
NmuCI GTSAC 4 cut(s) 368, 480, 712, 1656
NsiI ATGCAT 2 cut(s) 1534, 2068
NspI RCATGY 3 cut(s) 914, 1252, 2668
NspV TTCGAA 1 cut(s) 2437
PagI TCATGA 1 cut(s) 390
PalAI GGCGCGCC 1 cut(s) 152
PasI CCCWGGG 1 cut(s) 513
PauI GCGCGC 1 cut(s) 152
PcsI WCGNNNNNNNCGW 2 cut(s) 17, 29
PctI GAATGC 3 cut(s) 2068, 3061, 3250
PdiI GCCGGC 2 cut(s) 108, 341
PdmI GAANNNNTTC 1 cut(s) 677
PfeI GAWTC 7 cut(s) 59, 242, 673, 1162, 1778, 1943, 2966
Pfl23II CGTACG 1 cut(s) 309
PflMI CCANNNNNTGG 1 cut(s) 2090
PinAI ACCGGT 1 cut(s) 3177
PleI GAGTC 8 cut(s) 310, 445, 1075, 1663, 2862, 2883, 2992, 3193
PmaCI CACGTG 1 cut(s) 3035
PmlI CACGTG 1 cut(s) 3035
PpsI GAGTC 8 cut(s) 310, 445, 1075, 1663, 2862, 2883, 2992, 3193
Ppu21I YACGTR 1 cut(s) 3035
PpuMI RGGWCCY 1 cut(s) 419
PsiI TTATAA 1 cut(s) 777
Psp124BI GAGCTC 2 cut(s) 41, 333
Psp1406I AACGTT 1 cut(s) 375
Psp5II RGGWCCY 1 cut(s) 419
Psp6I CCWGG 8 cut(s) 512, 1412, 1434, 2584, 2905, 2932, 3001, 3139
PspCI CACGTG 1 cut(s) 3035
PspFI CCCAGC 1 cut(s) 836
PspGI CCWGG 8 cut(s) 512, 1412, 1434, 2584, 2905, 2932, 3001, 3139
PspLI CGTACG 1 cut(s) 309
PspN4I GGNNCC 6 cut(s) 212, 213, 420, 2321, 2352, 2560
PspOMI GGGCCC 1 cut(s) 210
PspPI GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2107
PspPPI RGGWCCY 1 cut(s) 419
PsrI GAACNNNNNNTAC 2 cut(s) 2202, 2234
PstI CTGCAG 1 cut(s) 2866
PstNI CAGNNNCTG 2 cut(s) 770, 1996
PsuI RGATCY 5 cut(s) 1622, 1729, 1871, 2350, 2990
PteI GCGCGC 1 cut(s) 152
RsaI GTAC 6 cut(s) 311, 1106, 1615, 2408, 3049, 3203
RsaNI GTAC 6 cut(s) 310, 1105, 1614, 2407, 3048, 3202
RseI CAYNNNNRTG 7 cut(s) 753, 1253, 1467, 1836, 2285, 3150, 3243
SacI GAGCTC 2 cut(s) 41, 333
Sau3AI GATC 9 cut(s) 562, 1291, 1622, 1729, 1871, 2267, 2350, 2990, 3085
Sau96I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 2107
SchI GAGTC 8 cut(s) 311, 446, 1076, 1664, 2863, 2884, 2992, 3194
SduI GDGCHC 7 cut(s) 41, 214, 333, 513, 1138, 1435, 2530
SfaNI GCATC 9 cut(s) 1222, 1434, 1510, 1519, 1598, 2602, 2849, 2965, 3154
SfcI CTRYAG 3 cut(s) 1298, 1661, 2862
SfuI TTCGAA 1 cut(s) 2437
SgsI GGCGCGCC 1 cut(s) 152
SinI GGWCC 1 cut(s) 419
SmiI ATTTAAAT 1 cut(s) 585
SmiMI CAYNNNNRTG 7 cut(s) 753, 1253, 1467, 1836, 2285, 3150, 3243
SmlI CTYRAG 2 cut(s) 401, 2021
SmoI CTYRAG 2 cut(s) 401, 2021
SpeI ACTAGT 1 cut(s) 733
SsiI CCGC 7 cut(s) 67, 70, 104, 157, 296, 426, 1320
SspMI CTAG 9 cut(s) 423, 618, 734, 981, 1176, 1448, 2283, 2625, 3292
SstI GAGCTC 2 cut(s) 41, 333
StyI CCWWGG 3 cut(s) 42, 93, 132
SwaI ATTTAAAT 1 cut(s) 585
TaaI ACNGT 3 cut(s) 2341, 2385, 2769
TaiI ACGT 7 cut(s) 315, 378, 461, 501, 1823, 2051, 3037
TaqI TCGA 5 cut(s) 23, 1081, 2437, 2959, 3183
TatI WGTACW 2 cut(s) 1613, 3201
TauI GCSGC 4 cut(s) 70, 106, 159, 1322
TfiI GAWTC 7 cut(s) 59, 242, 673, 1162, 1778, 1943, 2966
TscAI CASTG 5 cut(s) 223, 1026, 1411, 1522, 2344
TseFI GTSAC 4 cut(s) 368, 480, 712, 1656
Tsp45I GTSAC 4 cut(s) 368, 480, 712, 1656
TspGWI ACGGA 4 cut(s) 299, 1373, 2504, 2644
TspRI CASTG 5 cut(s) 223, 1026, 1411, 1522, 2344
Van91I CCANNNNNTGG 1 cut(s) 2090
Vha464I CTTAAG 2 cut(s) 401, 2021
VpaK11BI GGWCC 1 cut(s) 419
XbaI TCTAGA 1 cut(s) 617
XceI RCATGY 3 cut(s) 914, 1252, 2668
XcmI CCANNNNNNNNNTGG 1 cut(s) 934
XmiI GTMKAC 1 cut(s) 1633
XmnI GAANNNNTTC 1 cut(s) 677
XspI CTAG 9 cut(s) 423, 618, 734, 981, 1176, 1448, 2283, 2625, 3292
Zsp2I ATGCAT 2 cut(s) 1534, 2068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.