RchiOBHm_Chr5g0036041
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0005645
Physical Location & Seq
Forward (+)
30165086 .. 30169123
4038 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31486

Sequence Viewer

Length: 1143 bp
ATGCACCAGTTGGAGAGTAGCACACCTCACTTTGTTCGCTGCATAAAGCCAAATGGTAAGCAGCTTCCCGGTGTGTATGAAGCAGAACTTGTTTTACAACAGCTCAGGTGTTCTGGAGTTTCAGAGGTTGTTAGGATATCACGATCTGGATATCCCACTAGAATGACACATCAAGAATTTGCAGGAAGGTATGGGTTCCTGCTTCCAAAGGCCACTGTTGCTAAGGATCCATTAAGTCTATCTATTGCTGTTCTACAACAGTTCAGTTTCCTCCCTGAAATGTACCAAATAGGCTATACGAAAGTGTATCTTCGAACAGGGCAGATTGCTGCATTGGAGGATAAGAGAAATAAAGTTCTCCGAGGAATAATTGGTGTTCAAAAGTATTTCCGTGGTTACTGGGCTCGCCGTCATTTTCATCAAATTAAGGAAGGAACCACAAAATTACAATCAAATGTTCCTGGTGGAAATGCTGGAAGGAAAGCTGATGCTCTAAAAACTAGACGGAAATCCAGCAGGAAGAGTTCTGAAGTGAAGGACATGCCTTCAGAATTAGAACAATTACGAAGGCGAGTGCTTCAGGCTGAGGCAACTCTGGAGCGAAAGGAAGAGGAAAATGCTGAGTTGCAGGAGCAGCTACAACAGTTTCAGACAAGATGGTCAGATTACGAGGCAAAGATGAAATCAATGCAGGATGTCTGGCAAAAGCAGATGGCGTCTTTGCAAGTGAGTCTTTCTGCAGCCAGAAAGAGTCTTACTTCTGACAATACAGCTTGTCAACCTGGAAGAGTAGATGTTTGTTCACCTCGATATGATTCGGAAGATGCGCTCTCAATGGGATCTCGGACTCCTGGTGCAAGCACACCTATCAATGGGGTAGCGCGTGAGACAAATGGTACTTTGAATGCTGTCGGAAATTTGGTGAAGGAATTTGATCAACAGAGACAAACTTTTGATGATGAAGTGAAAGCTCTGATTGAGGTAAAACCTGGGCATCCTGATGAAGAACTAAGGAAACTTAAACACCGGTTTGAGTCATGGAAGAAAGAGTACAAGGCAAGATTACGAGAGACAAAGATAAAGCTCCATAAACATGGGCATTCAGAAGAGGAAAAGAGGCGAAAGAAATGGTGGGTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000146 GO:0000166 GO:0000278 GO:0000281 GO:0000302 GO:0000910 GO:0001891 GO:0001931 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005826 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006971 GO:0006979 GO:0006996 GO:0007010 GO:0007015 GO:0007033 GO:0007049 GO:0007154 GO:0008064 GO:0008092 GO:0008104 GO:0008144 GO:0008150 GO:0008360 GO:0009267 GO:0009506 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009636 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010243 GO:0010639 GO:0012505 GO:0014070 GO:0014074 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016459 GO:0016460 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030038 GO:0030048 GO:0030054 GO:0030139 GO:0030554 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0030898 GO:0031033 GO:0031034 GO:0031152 GO:0031154 GO:0031254 GO:0031268 GO:0031270 GO:0031333 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032009 GO:0032060 GO:0032153 GO:0032155 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032796 GO:0032956 GO:0032970 GO:0032982 GO:0032991 GO:0033036 GO:0033043 GO:0033275 GO:0033298 GO:0033554 GO:0034461 GO:0034622 GO:0035639 GO:0036094 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042542 GO:0042594 GO:0042623 GO:0042641 GO:0042802 GO:0042803 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0044877 GO:0045177 GO:0045179 GO:0045335 GO:0046677 GO:0046683 GO:0046847 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051179 GO:0051301 GO:0051493 GO:0051494 GO:0051591 GO:0051606 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0055044 GO:0060327 GO:0060328 GO:0061572 GO:0061640 GO:0065003 GO:0065007 GO:0065008 GO:0070252 GO:0070938 GO:0071496 GO:0071840 GO:0071889 GO:0071944 GO:0090066 GO:0090702 GO:0097159 GO:0097204 GO:0097367 GO:0097435 GO:0097708 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0110053 GO:0120025 GO:0120031 GO:0120036 GO:1901265 GO:1901363 GO:1901698 GO:1901700 GO:1902903 GO:1902904 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ Myosin_N Myosin_head

Protein Analysis

380

Amino Acids

43.7

Weight (kDa)

9.76

Isoelectric Point (pI)

52.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_head PF00063 1 - 105 7.2e-27 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 658
AccII CGCG 1 cut(s) 883
AclWI GGATC 3 cut(s) 221, 234, 847
AcsI RAATTY 3 cut(s) 176, 916, 929
AcuI CTGAAG 3 cut(s) 531, 549, 563
AcyI GRCGYC 1 cut(s) 716
AfaI GTAC 3 cut(s) 284, 898, 1052
AfiI CCNNNNNNNGG 1 cut(s) 872
AgeI ACCGGT 1 cut(s) 1026
AgsI TTSAA 2 cut(s) 380, 904
AjnI CCWGG 4 cut(s) 460, 781, 850, 988
AluBI AGCT 7 cut(s) 64, 103, 485, 637, 773, 971, 1084
AluI AGCT 7 cut(s) 64, 103, 485, 637, 773, 971, 1084
Alw26I GTCTC 3 cut(s) 881, 937, 1064
AlwI GGATC 3 cut(s) 221, 234, 847
AoxI GGCC 1 cut(s) 210
ApeKI GCWGC 5 cut(s) 39, 61, 329, 634, 740
ApoI RAATTY 3 cut(s) 176, 916, 929
AsiGI ACCGGT 1 cut(s) 1026
AspLEI GCGC 2 cut(s) 829, 883
AsuC2I CCSGG 1 cut(s) 69
AsuHPI GGTGA 2 cut(s) 795, 934
AsuII TTCGAA 1 cut(s) 313
BamHI GGATCC 1 cut(s) 226
BanII GRGCYC 1 cut(s) 406
BarI GAAGNNNNNNTAC 2 cut(s) 1034, 1066
BbvCI CCTCAGC 1 cut(s) 585
BbvI GCAGC 5 cut(s) 26, 73, 316, 646, 752
BccI CCATC 2 cut(s) 651, 706
BceAI ACGGC 1 cut(s) 393
BciT130I CCWGG 4 cut(s) 462, 783, 852, 990
BclI TGATCA 1 cut(s) 934
BcnI CCSGG 1 cut(s) 69
BcoDI GTCTC 3 cut(s) 881, 937, 1064
BfaI CTAG 3 cut(s) 159, 501, 1141
BfmI CTRYAG 1 cut(s) 738
BisI GCNGC 5 cut(s) 40, 62, 330, 635, 741
BlsI GCNGC 5 cut(s) 41, 63, 331, 636, 742
Bme1390I CCNGG 5 cut(s) 69, 462, 783, 852, 990
BmiI GGNNCC 3 cut(s) 197, 228, 436
BmrFI CCNGG 5 cut(s) 69, 462, 783, 852, 990
BmrI ACTGGG 1 cut(s) 409
BmsI GCATC 3 cut(s) 478, 814, 1003
BmuI ACTGGG 1 cut(s) 409
BpmI CTGGAG 2 cut(s) 135, 617
Bpu10I CCTNAGC 3 cut(s) 104, 222, 585
Bpu14I TTCGAA 1 cut(s) 313
BpuMI CCSGG 1 cut(s) 69
BsaHI GRCGYC 1 cut(s) 716
BsaJI CCNNGG 3 cut(s) 361, 391, 989
BsaWI WCCGGW 1 cut(s) 1026
Bsc4I CCNNNNNNNGG 1 cut(s) 872
Bse118I RCCGGY 1 cut(s) 1026
Bse1I ACTGG 2 cut(s) 7, 404
BseBI CCWGG 4 cut(s) 462, 783, 852, 990
BseDI CCNNGG 3 cut(s) 361, 391, 989
BseGI GGATG 2 cut(s) 700, 994
BseLI CCNNNNNNNGG 1 cut(s) 872
BseMII CTCAG 3 cut(s) 118, 576, 612
BseNI ACTGG 2 cut(s) 7, 404
BseXI GCAGC 5 cut(s) 26, 73, 316, 646, 752
Bsh1236I CGCG 1 cut(s) 883
BshFI GGCC 1 cut(s) 212
BshTI ACCGGT 1 cut(s) 1026
BsiSI CCGG 2 cut(s) 69, 1027
BslI CCNNNNNNNGG 1 cut(s) 872
BsmAI GTCTC 3 cut(s) 881, 937, 1064
BsmI GAATGC 2 cut(s) 910, 1099
BsnI GGCC 1 cut(s) 212
Bsp119I TTCGAA 1 cut(s) 313
Bsp1286I GDGCHC 1 cut(s) 406
Bsp143I GATC 4 cut(s) 143, 226, 839, 934
BspANI GGCC 1 cut(s) 212
BspCNI CTCAG 3 cut(s) 117, 577, 613
BspFNI CGCG 1 cut(s) 883
BspLI GGNNCC 3 cut(s) 197, 228, 436
BspMAI CTGCAG 1 cut(s) 742
BspPI GGATC 3 cut(s) 221, 234, 847
BspT104I TTCGAA 1 cut(s) 313
BsrFI RCCGGY 1 cut(s) 1026
BsrI ACTGG 2 cut(s) 7, 404
BssAI RCCGGY 1 cut(s) 1026
BssECI CCNNGG 3 cut(s) 361, 391, 989
BssMI GATC 4 cut(s) 143, 226, 839, 934
BssNI GRCGYC 1 cut(s) 716
Bst2UI CCWGG 4 cut(s) 462, 783, 852, 990
Bst4CI ACNGT 3 cut(s) 217, 261, 645
Bst6I CTCTTC 4 cut(s) 515, 603, 781, 1101
BstACI GRCGYC 1 cut(s) 716
BstBI TTCGAA 1 cut(s) 313
BstC8I GCNNGC 2 cut(s) 406, 859
BstDEI CTNAG 5 cut(s) 104, 222, 585, 621, 1010
BstDSI CCRYGG 1 cut(s) 391
BstF5I GGATG 2 cut(s) 700, 994
BstFNI CGCG 1 cut(s) 883
BstHHI GCGC 2 cut(s) 829, 883
BstKTI GATC 4 cut(s) 146, 229, 842, 937
BstMAI GTCTC 3 cut(s) 881, 937, 1064
BstMBI GATC 4 cut(s) 143, 226, 839, 934
BstMWI GCNNNNNNNGC 2 cut(s) 218, 634
BstNI CCWGG 4 cut(s) 462, 783, 852, 990
BstNSI RCATGY 1 cut(s) 544
BstSCI CCNGG 5 cut(s) 67, 460, 781, 850, 988
BstSFI CTRYAG 1 cut(s) 738
BstUI CGCG 1 cut(s) 883
BstV1I GCAGC 5 cut(s) 26, 73, 316, 646, 752
BstX2I RGATCY 2 cut(s) 226, 839
BstXI CCANNNNNNTGG 1 cut(s) 1094
BstYI RGATCY 2 cut(s) 226, 839
BsuRI GGCC 1 cut(s) 212
BtgI CCRYGG 1 cut(s) 391
BtsCI GGATG 2 cut(s) 700, 994
BtsIMutI CAGTG 1 cut(s) 213
Cac8I GCNNGC 2 cut(s) 406, 859
CfoI GCGC 2 cut(s) 829, 883
Cfr10I RCCGGY 1 cut(s) 1026
CseI GACGC 1 cut(s) 705
Csp6I GTAC 3 cut(s) 283, 897, 1051
CspAI ACCGGT 1 cut(s) 1026
CviAII CATG 3 cut(s) 541, 1038, 1094
CviQI GTAC 3 cut(s) 283, 897, 1051
DdeI CTNAG 5 cut(s) 104, 222, 585, 621, 1010
DpnI GATC 4 cut(s) 145, 228, 841, 936
DpnII GATC 4 cut(s) 143, 226, 839, 934
DrdI GACNNNNNNGTC 1 cut(s) 658
DseDI GACNNNNNNGTC 1 cut(s) 658
Eam1104I CTCTTC 4 cut(s) 515, 603, 781, 1101
EarI CTCTTC 4 cut(s) 515, 603, 781, 1101
Eco24I GRGCYC 1 cut(s) 406
Eco32I GATATC 2 cut(s) 138, 152
Eco57I CTGAAG 3 cut(s) 531, 549, 563
EcoRII CCWGG 4 cut(s) 460, 781, 850, 988
EcoRV GATATC 2 cut(s) 138, 152
EcoT38I GRGCYC 1 cut(s) 406
FaeI CATG 3 cut(s) 544, 1041, 1097
FaiI YATR 9 cut(s) 44, 78, 192, 297, 542, 813, 1039, 1089, 1095
FalI AAGNNNNNCTT 6 cut(s) 72, 104, 294, 326, 717, 749
FatI CATG 3 cut(s) 540, 1037, 1093
FbaI TGATCA 1 cut(s) 934
Fnu4HI GCNGC 5 cut(s) 40, 62, 330, 635, 741
FokI GGATG 2 cut(s) 707, 981
FriOI GRGCYC 1 cut(s) 406
Fsp4HI GCNGC 5 cut(s) 40, 62, 330, 635, 741
FspBI CTAG 3 cut(s) 159, 501, 1141
GlaI GCGC 2 cut(s) 828, 882
GluI GCNGC 5 cut(s) 40, 62, 330, 635, 741
GsuI CTGGAG 2 cut(s) 135, 617
HaeIII GGCC 1 cut(s) 212
HapII CCGG 2 cut(s) 69, 1027
HgaI GACGC 1 cut(s) 705
HhaI GCGC 2 cut(s) 829, 883
Hin1I GRCGYC 1 cut(s) 716
Hin1II CATG 3 cut(s) 544, 1041, 1097
Hin6I GCGC 2 cut(s) 827, 881
HinP1I GCGC 2 cut(s) 827, 881
HincII GTYRAC 1 cut(s) 779
HindII GTYRAC 1 cut(s) 779
HinfI GANTC 5 cut(s) 730, 751, 815, 847, 1034
HpaII CCGG 2 cut(s) 69, 1027
HphI GGTGA 2 cut(s) 795, 934
Hpy166II GTNNAC 2 cut(s) 779, 803
Hpy188III TCNNGA 6 cut(s) 114, 141, 147, 173, 596, 998
Hpy8I GTNNAC 2 cut(s) 779, 803
HpyAV CCTTC 7 cut(s) 180, 425, 471, 529, 555, 561, 919
HpyCH4III ACNGT 3 cut(s) 217, 261, 645
HpyCH4V TGCA 9 cut(s) 4, 42, 182, 332, 628, 691, 724, 740, 857
HpyF10VI GCNNNNNNNGC 2 cut(s) 218, 634
HpyF3I CTNAG 5 cut(s) 104, 222, 585, 621, 1010
Hsp92I GRCGYC 1 cut(s) 716
Hsp92II CATG 3 cut(s) 544, 1041, 1097
HspAI GCGC 2 cut(s) 827, 881
Ksp22I TGATCA 1 cut(s) 934
Kzo9I GATC 4 cut(s) 143, 226, 839, 934
LmnI GCTCC 3 cut(s) 598, 631, 1089
Lsp1109I GCAGC 5 cut(s) 26, 73, 316, 646, 752
LweI GCATC 3 cut(s) 478, 814, 1003
MaeI CTAG 3 cut(s) 159, 501, 1141
MaeIII GTNAC 1 cut(s) 395
MalI GATC 4 cut(s) 145, 228, 841, 936
MboI GATC 4 cut(s) 143, 226, 839, 934
MboII GAAGA 8 cut(s) 302, 532, 620, 798, 833, 1016, 1054, 1118
MflI RGATCY 2 cut(s) 226, 839
MhlI GDGCHC 1 cut(s) 406
MluCI AATT 8 cut(s) 176, 369, 423, 443, 551, 560, 916, 929
MlyI GAGTC 4 cut(s) 739, 760, 841, 1043
MmeI TCCRAC 1 cut(s) 892
MseI TTAA 3 cut(s) 233, 426, 1020
MslI CAYNNNNRTG 3 cut(s) 161, 999, 1092
MspI CCGG 2 cut(s) 69, 1027
MspR9I CCNGG 5 cut(s) 69, 462, 783, 852, 990
Mva1269I GAATGC 2 cut(s) 910, 1099
MvaI CCWGG 4 cut(s) 462, 783, 852, 990
MvnI CGCG 1 cut(s) 883
MwoI GCNNNNNNNGC 2 cut(s) 218, 634
NciI CCSGG 1 cut(s) 69
NdeII GATC 4 cut(s) 143, 226, 839, 934
NlaIII CATG 3 cut(s) 544, 1041, 1097
NlaIV GGNNCC 3 cut(s) 197, 228, 436
NspI RCATGY 1 cut(s) 544
NspV TTCGAA 1 cut(s) 313
PctI GAATGC 2 cut(s) 910, 1099
PfeI GAWTC 1 cut(s) 815
PinAI ACCGGT 1 cut(s) 1026
PkrI GCNGC 5 cut(s) 41, 63, 331, 636, 742
PleI GAGTC 4 cut(s) 738, 759, 841, 1042
PpsI GAGTC 4 cut(s) 738, 759, 841, 1042
Psp6I CCWGG 4 cut(s) 460, 781, 850, 988
PspGI CCWGG 4 cut(s) 460, 781, 850, 988
PspN4I GGNNCC 3 cut(s) 197, 228, 436
PsrI GAACNNNNNNTAC 2 cut(s) 78, 110
PstI CTGCAG 1 cut(s) 742
PsuI RGATCY 2 cut(s) 226, 839
RsaI GTAC 3 cut(s) 284, 898, 1052
RsaNI GTAC 3 cut(s) 283, 897, 1051
RseI CAYNNNNRTG 3 cut(s) 161, 999, 1092
SaqAI TTAA 3 cut(s) 233, 426, 1020
SatI GCNGC 5 cut(s) 40, 62, 330, 635, 741
Sau3AI GATC 4 cut(s) 143, 226, 839, 934
SchI GAGTC 4 cut(s) 739, 760, 841, 1043
ScrFI CCNGG 5 cut(s) 69, 462, 783, 852, 990
SduI GDGCHC 1 cut(s) 406
SfaNI GCATC 3 cut(s) 478, 814, 1003
SfcI CTRYAG 1 cut(s) 738
SfuI TTCGAA 1 cut(s) 313
SmiMI CAYNNNNRTG 3 cut(s) 161, 999, 1092
Sse9I AATT 8 cut(s) 176, 369, 423, 443, 551, 560, 916, 929
SspMI CTAG 3 cut(s) 159, 501, 1141
StyD4I CCNGG 5 cut(s) 67, 460, 781, 850, 988
TaaI ACNGT 3 cut(s) 217, 261, 645
TaqI TCGA 2 cut(s) 313, 808
TasI AATT 8 cut(s) 176, 369, 423, 443, 551, 560, 916, 929
TatI WGTACW 1 cut(s) 1050
TfiI GAWTC 1 cut(s) 815
Tru1I TTAA 3 cut(s) 233, 426, 1020
Tru9I TTAA 3 cut(s) 233, 426, 1020
TscAI CASTG 1 cut(s) 220
TseI GCWGC 5 cut(s) 39, 61, 329, 634, 740
TspDTI ATGAA 5 cut(s) 93, 407, 695, 975, 1017
TspGWI ACGGA 2 cut(s) 380, 520
TspRI CASTG 1 cut(s) 220
XapI RAATTY 3 cut(s) 176, 916, 929
XceI RCATGY 1 cut(s) 544
XspI CTAG 3 cut(s) 159, 501, 1141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.