Rh5DG255000
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0005645
Physical Location & Seq
Forward (+)
29937273 .. 29947506
10234 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG255000.1

Sequence Viewer

Length: 3111 bp
ATGATGGTGTCGGCGTCGCCGTCGATGGTGGCGAGGAGCTCCTTGGAGGAAATGCTGGATTCGCTGCGGCGGAGGGACGAGGCTGAGAAGCCCAAGGAATTGCCGCCGGCATTGCCGTCCCGGCCCACTTCCAAGGCTCGGCTGCCGTCGGCGCGCCGCTCCTTGCCCAACAACTTCAATGCCGAGGCCTTAATCCGGTCGCCGGAGTGGGCCCCCAGTGTGAACAAGAGGAAAGAGAGGGATTCCGGGGTCAAGAGGTGTAATAATTTTTGTGTCAAGAAGACGGAGAAGGACGCGGTGGAGTCGCCGTACGTTGCGTCGGAGGGGGAGCTTCAGAGCCGGCAAAAGGTGGCGAAGTCCGATTGGGGTGACAACGTTGCTTATTTCATCATGAAGAAACTTAAGGTTTGGTGTCGGGGTCCTAGTGGACTATGGGAGTCAGGAACAATACAATCAACGTCCGGGGATGTGGCATTTGTGTCACTTTCAAGTGGAAATGTAATCAAAGTGCCCAGGGATGAGCTGCTACCAGCAAACCCAGATGTTCTGGAAGGGGTGGATGATCTTGCACAGCTTAGCTATTTAAATGACCCTTCTGTTCTTTGCAATCTTCAGTCTAGATATTCACAGGACATGATTTATAGCAAAGCAGGGCCAGTTTTGATTGCAATGAATCCTTTCAAAGATGTCCAAATTTGTGGAGATGATTTTGTCACAGCGTATAGGAAGAAACTTGTGGACAAACCTCATGTTTATGCAATAGCAGACGCTGCTTATAATGAGATGATGAGAGATGATGTAAATCAGTCCATAATCATAAGTGGGGAAAGTGGAGCTGGGAAAACGGAGACAGCAAAAATTGCAATGCAATACTTAGCTGCTCTTGGTGGTGGGAGTCGTGGCGTGGAACATGCAATCCTTCAGACCAACTGTATACTGGAGGCATTTGGAAATGCAAAATCATCCAGAAATGATAACGCTAGCCGATTTGGGAAGTTGCTTGAAATTCATTTTAGCTCAGTGGGAAAAATATGTGGTGCTGAAATTCAAACCTTGTTTCTAGAAAAGTCAAGAGTGGCTCGACTGGAAAATGGTGAGAGGTCGTACCATATCTTTTATCAACTTTGTGCTGGTGCTCCATCAATGCTTAAAGCTATAACCACTGCTTCCAGGCTGATGGGATGTAGTGCCCAGGAGTTGATGCTAGCTTTATCCACCCATGACAATGCTGTTGAGGATAGTATTGATAAGAGATTGACGTTGCAGCAGGCCACTGATGCAAGGGATGCATTAGCAAAATTTATCTATGTGAGCTTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCTCTTCAGGGAAGATGCTGTACTGGGAGATCCATCAGTATACTTGATATATATGGGTTTGAGTCACTACAGAAGAACAGCTTTGAACAGATGTGTACTAATTATGCAAATGAGAGGCTGCAACAACATTTCAATCGCCATTTATTAAAGCTTGAACAGGAGGAATGTGAATTGGATGGGGTTGATTGGACTAAAGTAGATTTTGAAGACAACCAAGAGTGCTTGGATCTCTTTGAGAAGAAACCTTTCGGGCTACTATCCTTGTTGGAAGAGGAATCAAACTGCCCAAAGGCAACTGATTTGACCATTGCTGATATGTTTAAGCAGCACTCGAATGGGAATTCTTGCTTTAAAGCAGAGAGAGGCAGATCTTTCAGTATTCGTCATCATGCTGGAGAGGTTCTATACGACACAAGTGGCTTCTTGGAAAAGAACAGAGATTCTTTGTCCCCTGTTACCATCCAGCTCTTGTCATCATGCAGCAGTCAGCTTCTGCGATTGTTTACCTCCAGAGTGCTTAAGCAAGTCAAGAAACCAGCAGCTACGTCTTGCCAGATGAATGCATTGGACTCTCCAAAACCAAGTGTTGGTATTAAGTTCAAGGCCCAATTATTTAAACTAATGCACCAGTTGGAGAGTAGCACACCTCACTTTGTTCGCTGCATAAAGCCAAATGGCAAGCAGCTTCCCGGTGTGTATGAAGCAGAACTTGTTTTACAACAGCTCAGGTGTTCTGGAGTTTCAGAGGTTGTTAGGATATCACGATCTGGATATCCCACTAGAATGACACATCAAGAATTTGCAGGAAGGTATGGGTTCCTGCTTCCAAAGGCCACTGTTGCTAAGGATCCATTAAGTCTATCTATTGCTGTTCTACAACAGTTCAGTTTCCTCCCTGAAATGTACCAAATAGGCTATACGAAAGTGTATCTTCGAACAGGGCAGATTGCTGCATTGGAGGATAAGAGAAATAAAGTTCTCCGAGGAATAATTGGTGTTCAAAAGTATTTCCGTGGTTACTGGGCTCGCCGTCATTTTCATCAAATTAAGGAAGGAACCACAAAATTACAATCAAATGTTCCTGGTGGAAATGCTGGAAGGAAAGCTGATGCTCTAAAAACTAGACGGAAATCCAGCAGGAAGAGTTCTGAAGTGAAGGACATGCCTTCAGAATTAGAACAACTACGAAGGCGAGTGCTTCAGGCTGAGGCAACTCTGGAGCGAAAGGAAGAGGAAAATGCTGAGTTGCAGGAGCAGCTACAACAGTTTCAGACAAGATGGTCAGATTACGAGGCAAAGATGAAATCAATGCAGGATGTCTGGCAAAAGCAGATGGCGTCTTTGCAAGTGAGTCTTTCTGCAGCCAGAAAGAGTCTTACTTCTGACAATACAGCTTGTCAACCTGGAAGAGTAGATGTTTGTTCACCTCGATATGATTCGGAAGATGCGCTCTCAATGGGATCTCGAACTCCTGGTGCAAGCACACCTATCAATGGGGTAGCGCGTGAGACAAATGGTACTTTGAATGCTGTCGGAAATTTGGTGAAGGAATTTGATCAACAGAGACAAACTTTTGATGATGAAGTGAAAGCTCTGATTGAGGTAAAACCTGGGCATCCTGATGAAGAACTAAGGAAACTTAAACACCGGTTTGAGTCATGGAAGAAAGAGTACAAGGCAAGATTACGAGAGACAAAGACAAAGCTCCATAAACATGGGCATTCAGAAGAGGAAAAGAGGCGAAAGAAATGGTGGGTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000146 GO:0000166 GO:0000278 GO:0000281 GO:0000302 GO:0000910 GO:0001891 GO:0001931 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005826 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006971 GO:0006979 GO:0006996 GO:0007010 GO:0007015 GO:0007033 GO:0007049 GO:0007154 GO:0008064 GO:0008092 GO:0008104 GO:0008144 GO:0008150 GO:0008360 GO:0009267 GO:0009506 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009636 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010243 GO:0010639 GO:0012505 GO:0014070 GO:0014074 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016459 GO:0016460 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030038 GO:0030048 GO:0030054 GO:0030139 GO:0030554 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0030863 GO:0030864 GO:0030865 GO:0030866 GO:0030898 GO:0031033 GO:0031034 GO:0031152 GO:0031154 GO:0031254 GO:0031268 GO:0031270 GO:0031333 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032009 GO:0032060 GO:0032153 GO:0032155 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032796 GO:0032956 GO:0032970 GO:0032982 GO:0032991 GO:0033036 GO:0033043 GO:0033275 GO:0033298 GO:0033554 GO:0034461 GO:0034622 GO:0035639 GO:0036094 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0042542 GO:0042594 GO:0042623 GO:0042641 GO:0042802 GO:0042803 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0044877 GO:0045177 GO:0045179 GO:0045335 GO:0046677 GO:0046683 GO:0046847 GO:0046983 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051179 GO:0051301 GO:0051493 GO:0051494 GO:0051591 GO:0051606 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0055044 GO:0060327 GO:0060328 GO:0061572 GO:0061640 GO:0065003 GO:0065007 GO:0065008 GO:0070252 GO:0070938 GO:0071496 GO:0071840 GO:0071889 GO:0071944 GO:0090066 GO:0090702 GO:0097159 GO:0097204 GO:0097367 GO:0097435 GO:0097708 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0110053 GO:0120025 GO:0120031 GO:0120036 GO:1901265 GO:1901363 GO:1901698 GO:1901700 GO:1902903 GO:1902904 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ Myosin_N Myosin_head

Protein Analysis

1036

Amino Acids

116.65

Weight (kDa)

9.01

Isoelectric Point (pI)

50.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SH3_VIII-1_N PF25369 134 - 178 1.5e-17 Myosin-1-like, N-terminal SH3 domain
Myosin_head PF00063 186 - 384 7.7e-79 Myosin head (motor domain)
Myosin_head PF00063 384 - 761 1.3e-109 Myosin head (motor domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 777
AasI GACNNNNNNGTC 1 cut(s) 2626
AccB7I CCANNNNNTGG 1 cut(s) 1934
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 2 cut(s) 934, 1387
AccII CGCG 3 cut(s) 154, 296, 2851
AciI CCGC 5 cut(s) 67, 70, 104, 157, 296
AclI AACGTT 1 cut(s) 375
AclWI GGATC 5 cut(s) 1371, 1581, 2189, 2202, 2815
AcsI RAATTY 8 cut(s) 693, 1005, 1044, 1298, 1687, 2144, 2884, 2897
AcuI CTGAAG 7 cut(s) 317, 596, 905, 1337, 2499, 2517, 2531
AcyI GRCGYC 2 cut(s) 14, 2684
AfaI GTAC 7 cut(s) 311, 1106, 1369, 1444, 2252, 2866, 3020
AfiI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 1934, 2840
AflII CTTAAG 2 cut(s) 401, 1865
AgeI ACCGGT 1 cut(s) 2994
AjnI CCWGG 7 cut(s) 512, 1169, 1191, 2428, 2749, 2818, 2956
AloI GAACNNNNNNTCC 2 cut(s) 900, 932
Alw21I GWGCWC 2 cut(s) 41, 1138
Alw26I GTCTC 5 cut(s) 842, 1353, 2849, 2905, 3032
AlwI GGATC 5 cut(s) 1371, 1581, 2189, 2202, 2815
AlwNI CAGNNNCTG 2 cut(s) 770, 1840
AoxI GGCC 7 cut(s) 122, 186, 210, 653, 1269, 1950, 2178
ApaI GGGCCC 1 cut(s) 214
ApoI RAATTY 8 cut(s) 693, 1005, 1044, 1298, 1687, 2144, 2884, 2897
AscI GGCGCGCC 1 cut(s) 152
AsiGI ACCGGT 1 cut(s) 2994
Asp700I GAANNNNTTC 2 cut(s) 677, 1592
AspLEI GCGC 4 cut(s) 154, 156, 2797, 2851
AspS9I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 1951
AsuC2I CCSGG 4 cut(s) 121, 247, 463, 2037
AsuHPI GGTGA 4 cut(s) 380, 1106, 2763, 2902
AsuII TTCGAA 1 cut(s) 2281
AsuNHI GCTAGC 2 cut(s) 980, 1204
AvaII GGWCC 1 cut(s) 419
BaeGI GKGCMC 3 cut(s) 214, 513, 1192
BamHI GGATCC 1 cut(s) 2194
BanII GRGCYC 3 cut(s) 41, 214, 2374
BarI GAAGNNNNNNTAC 4 cut(s) 1351, 1383, 3002, 3034
BbsI GAAGAC 2 cut(s) 287, 1560
Bbv12I GWGCWC 2 cut(s) 41, 1138
BbvCI CCTCAGC 1 cut(s) 2553
BccI CCATC 8 cut(s) 19, 1147, 1171, 1388, 1517, 1814, 2619, 2674
BceAI ACGGC 5 cut(s) 4, 100, 130, 292, 2361
BciT130I CCWGG 7 cut(s) 514, 1171, 1193, 2430, 2751, 2820, 2958
BclI TGATCA 1 cut(s) 2902
BcnI CCSGG 4 cut(s) 121, 247, 463, 2037
BcoDI GTCTC 5 cut(s) 842, 1353, 2849, 2905, 3032
BfaI CTAG 8 cut(s) 423, 618, 981, 1061, 1205, 2127, 2469, 3109
BfmI CTRYAG 2 cut(s) 1415, 2706
BfrI CTTAAG 2 cut(s) 401, 1865
BglI GCCNNNNNGGC 1 cut(s) 121
BglII AGATCT 1 cut(s) 1715
BlpI GCTNAGC 1 cut(s) 575
Bme18I GGWCC 1 cut(s) 419
BmgT120I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 1951
BmiI GGNNCC 6 cut(s) 212, 213, 420, 2165, 2196, 2404
BmrI ACTGGG 3 cut(s) 210, 1380, 2377
BmsI GCATC 7 cut(s) 1191, 1267, 1276, 1352, 2446, 2782, 2971
BmtI GCTAGC 2 cut(s) 984, 1208
BmuI ACTGGG 3 cut(s) 210, 1380, 2377
BpiI GAAGAC 2 cut(s) 287, 1560
BpmI CTGGAG 5 cut(s) 959, 1761, 1840, 2103, 2585
Bpu10I CCTNAGC 3 cut(s) 2072, 2190, 2553
Bpu1102I GCTNAGC 1 cut(s) 575
Bpu14I TTCGAA 1 cut(s) 2281
BpuMI CCSGG 4 cut(s) 121, 247, 463, 2037
BsaBI GATNNNNATC 1 cut(s) 801
BsaHI GRCGYC 2 cut(s) 14, 2684
BsaWI WCCGGW 2 cut(s) 195, 2994
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 1934, 2840
Bse118I RCCGGY 3 cut(s) 106, 339, 2994
Bse1I ACTGG 8 cut(s) 216, 656, 942, 1089, 1328, 1375, 1975, 2372
Bse3DI GCAATG 4 cut(s) 110, 675, 870, 1653
Bse8I GATNNNNATC 1 cut(s) 801
BseBI CCWGG 7 cut(s) 514, 1171, 1193, 2430, 2751, 2820, 2958
BseJI GATNNNNATC 1 cut(s) 801
BseLI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 1934, 2840
BseMI GCAATG 4 cut(s) 110, 675, 870, 1653
BseMII CTCAG 5 cut(s) 75, 1032, 2086, 2544, 2580
BseNI ACTGG 8 cut(s) 216, 656, 942, 1089, 1328, 1375, 1975, 2372
BsePI GCGCGC 1 cut(s) 152
BseRI GAGGAG 1 cut(s) 49
BseSI GKGCMC 3 cut(s) 214, 513, 1192
BseYI CCCAGC 1 cut(s) 836
Bsh1236I CGCG 3 cut(s) 154, 296, 2851
Bsh1285I CGRYCG 1 cut(s) 200
BshFI GGCC 7 cut(s) 124, 188, 212, 655, 1271, 1952, 2180
BshTI ACCGGT 1 cut(s) 2994
BsiEI CGRYCG 1 cut(s) 200
BsiHKAI GWGCWC 2 cut(s) 41, 1138
BsiSI CCGG 9 cut(s) 107, 121, 196, 203, 246, 340, 462, 2037, 2995
BsiWI CGTACG 1 cut(s) 309
BslFI GGGAC 3 cut(s) 89, 103, 1780
BslI CCNNNNNNNGG 6 cut(s) 138, 195, 202, 346, 1934, 2840
BsmAI GTCTC 5 cut(s) 842, 1353, 2849, 2905, 3032
BsmFI GGGAC 3 cut(s) 89, 103, 1780
BsmI GAATGC 3 cut(s) 1912, 2878, 3067
BsnI GGCC 7 cut(s) 124, 188, 212, 655, 1271, 1952, 2180
Bsp119I TTCGAA 1 cut(s) 2281
Bsp120I GGGCCC 1 cut(s) 210
Bsp1286I GDGCHC 6 cut(s) 41, 214, 513, 1138, 1192, 2374
Bsp143I GATC 8 cut(s) 562, 1376, 1573, 1715, 2111, 2194, 2807, 2902
Bsp1720I GCTNAGC 1 cut(s) 575
BspACI CCGC 5 cut(s) 67, 70, 104, 157, 296
BspANI GGCC 7 cut(s) 124, 188, 212, 655, 1271, 1952, 2180
BspCNI CTCAG 5 cut(s) 76, 1031, 2085, 2545, 2581
BspFNI CGCG 3 cut(s) 154, 296, 2851
BspHI TCATGA 1 cut(s) 390
BspLI GGNNCC 6 cut(s) 212, 213, 420, 2165, 2196, 2404
BspMAI CTGCAG 1 cut(s) 2710
BspOI GCTAGC 2 cut(s) 984, 1208
BspPI GGATC 5 cut(s) 1371, 1581, 2189, 2202, 2815
BspT104I TTCGAA 1 cut(s) 2281
BspTI CTTAAG 2 cut(s) 401, 1865
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 4 cut(s) 110, 675, 870, 1653
BsrFI RCCGGY 3 cut(s) 106, 339, 2994
BsrI ACTGG 8 cut(s) 216, 656, 942, 1089, 1328, 1375, 1975, 2372
BssAI RCCGGY 3 cut(s) 106, 339, 2994
BssHII GCGCGC 1 cut(s) 152
BssMI GATC 8 cut(s) 562, 1376, 1573, 1715, 2111, 2194, 2807, 2902
BssNAI GTATAC 2 cut(s) 935, 1388
BssNI GRCGYC 2 cut(s) 14, 2684
BssT1I CCWWGG 3 cut(s) 42, 93, 132
Bst1107I GTATAC 2 cut(s) 935, 1388
Bst2UI CCWGG 7 cut(s) 514, 1171, 1193, 2430, 2751, 2820, 2958
Bst4CI ACNGT 4 cut(s) 932, 2185, 2229, 2613
Bst6I CTCTTC 6 cut(s) 1356, 1611, 2483, 2571, 2749, 3069
BstACI GRCGYC 2 cut(s) 14, 2684
BstAFI CTTAAG 2 cut(s) 401, 1865
BstAPI GCANNNNNTGC 3 cut(s) 770, 860, 1286
BstBI TTCGAA 1 cut(s) 2281
BstC8I GCNNGC 9 cut(s) 108, 154, 341, 982, 1206, 1269, 2027, 2374, 2827
BstDEI CTNAG 9 cut(s) 84, 575, 874, 1018, 2072, 2190, 2553, 2589, 2978
BstDSI CCRYGG 1 cut(s) 2359
BstFNI CGCG 3 cut(s) 154, 296, 2851
BstHHI GCGC 4 cut(s) 154, 156, 2797, 2851
BstKTI GATC 8 cut(s) 565, 1379, 1576, 1718, 2114, 2197, 2810, 2905
BstMAI GTCTC 5 cut(s) 842, 1353, 2849, 2905, 3032
BstMBI GATC 8 cut(s) 562, 1376, 1573, 1715, 2111, 2194, 2807, 2902
BstMCI CGRYCG 1 cut(s) 200
BstNI CCWGG 7 cut(s) 514, 1171, 1193, 2430, 2751, 2820, 2958
BstNSI RCATGY 2 cut(s) 914, 2512
BstSFI CTRYAG 2 cut(s) 1415, 2706
BstSLI GKGCMC 3 cut(s) 214, 513, 1192
BstUI CGCG 3 cut(s) 154, 296, 2851
BstV2I GAAGAC 2 cut(s) 287, 1560
BstX2I RGATCY 5 cut(s) 1376, 1573, 1715, 2194, 2807
BstXI CCANNNNNNTGG 3 cut(s) 698, 1177, 3062
BstYI RGATCY 5 cut(s) 1376, 1573, 1715, 2194, 2807
BstZ17I GTATAC 2 cut(s) 935, 1388
BsuRI GGCC 7 cut(s) 124, 188, 212, 655, 1271, 1952, 2180
BtgI CCRYGG 1 cut(s) 2359
BtsI GCAGTG 1 cut(s) 1161
BtsIMutI CAGTG 5 cut(s) 223, 1026, 1161, 1272, 2181
Cac8I GCNNGC 9 cut(s) 108, 154, 341, 982, 1206, 1269, 2027, 2374, 2827
CaiI CAGNNNCTG 2 cut(s) 770, 1840
CciI TCATGA 1 cut(s) 390
CfoI GCGC 4 cut(s) 154, 156, 2797, 2851
Cfr10I RCCGGY 3 cut(s) 106, 339, 2994
Cfr13I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 1951
CseI GACGC 5 cut(s) 3, 302, 306, 776, 2673
Csp6I GTAC 7 cut(s) 310, 1105, 1368, 1443, 2251, 2865, 3019
CspAI ACCGGT 1 cut(s) 2994
CviQI GTAC 7 cut(s) 310, 1105, 1368, 1443, 2251, 2865, 3019
DdeI CTNAG 9 cut(s) 84, 575, 874, 1018, 2072, 2190, 2553, 2589, 2978
DpnI GATC 8 cut(s) 564, 1378, 1575, 1717, 2113, 2196, 2809, 2904
DpnII GATC 8 cut(s) 562, 1376, 1573, 1715, 2111, 2194, 2807, 2902
DraI TTTAAA 3 cut(s) 585, 1699, 1963
DrdI GACNNNNNNGTC 1 cut(s) 2626
DseDI GACNNNNNNGTC 1 cut(s) 2626
Eam1104I CTCTTC 6 cut(s) 1356, 1611, 2483, 2571, 2749, 3069
EarI CTCTTC 6 cut(s) 1356, 1611, 2483, 2571, 2749, 3069
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 1 cut(s) 39
Eco130I CCWWGG 3 cut(s) 42, 93, 132
Eco147I AGGCCT 1 cut(s) 188
Eco24I GRGCYC 3 cut(s) 41, 214, 2374
Eco32I GATATC 2 cut(s) 2106, 2120
Eco47I GGWCC 1 cut(s) 419
Eco53kI GAGCTC 1 cut(s) 39
Eco57I CTGAAG 7 cut(s) 317, 596, 905, 1337, 2499, 2517, 2531
EcoICRI GAGCTC 1 cut(s) 39
EcoO109I RGGNCCY 2 cut(s) 211, 419
EcoRI GAATTC 1 cut(s) 1687
EcoRII CCWGG 7 cut(s) 512, 1169, 1191, 2428, 2749, 2818, 2956
EcoRV GATATC 2 cut(s) 2106, 2120
EcoT14I CCWWGG 3 cut(s) 42, 93, 132
EcoT22I ATGCAT 2 cut(s) 1291, 1912
EcoT38I GRGCYC 3 cut(s) 41, 214, 2374
ErhI CCWWGG 3 cut(s) 42, 93, 132
FalI AAGNNNNNCTT 8 cut(s) 1412, 1444, 2040, 2072, 2262, 2294, 2685, 2717
FaqI GGGAC 3 cut(s) 89, 103, 1780
FbaI TGATCA 1 cut(s) 2902
FblI GTMKAC 2 cut(s) 934, 1387
FriOI GRGCYC 3 cut(s) 41, 214, 2374
FspBI CTAG 8 cut(s) 423, 618, 981, 1061, 1205, 2127, 2469, 3109
GlaI GCGC 4 cut(s) 153, 155, 2796, 2850
GsaI CCCAGC 1 cut(s) 840
GsuI CTGGAG 5 cut(s) 959, 1761, 1840, 2103, 2585
HaeIII GGCC 7 cut(s) 124, 188, 212, 655, 1271, 1952, 2180
HapII CCGG 9 cut(s) 107, 121, 196, 203, 246, 340, 462, 2037, 2995
HgaI GACGC 5 cut(s) 3, 302, 306, 776, 2673
HhaI GCGC 4 cut(s) 154, 156, 2797, 2851
Hin1I GRCGYC 2 cut(s) 14, 2684
Hin6I GCGC 4 cut(s) 152, 154, 2795, 2849
HinP1I GCGC 4 cut(s) 152, 154, 2795, 2849
HincII GTYRAC 1 cut(s) 2747
HindII GTYRAC 1 cut(s) 2747
HindIII AAGCTT 1 cut(s) 1496
HpaII CCGG 9 cut(s) 107, 121, 196, 203, 246, 340, 462, 2037, 2995
HphI GGTGA 4 cut(s) 380, 1106, 2763, 2902
Hpy166II GTNNAC 9 cut(s) 223, 428, 739, 935, 1388, 1443, 1851, 2747, 2771
Hpy8I GTNNAC 9 cut(s) 223, 428, 739, 935, 1388, 1443, 1851, 2747, 2771
Hpy99I CGWCG 4 cut(s) 19, 25, 151, 322
HpyCH4III ACNGT 4 cut(s) 932, 2185, 2229, 2613
HpyCH4IV ACGT 5 cut(s) 312, 375, 458, 1259, 1892
HpyF3I CTNAG 9 cut(s) 84, 575, 874, 1018, 2072, 2190, 2553, 2589, 2978
HpySE526I ACGT 5 cut(s) 312, 375, 458, 1259, 1892
Hsp92I GRCGYC 2 cut(s) 14, 2684
HspAI GCGC 4 cut(s) 152, 154, 2795, 2849
KroI GCCGGC 2 cut(s) 106, 339
KroNI GCCGGC 2 cut(s) 108, 341
Ksp22I TGATCA 1 cut(s) 2902
Kzo9I GATC 8 cut(s) 562, 1376, 1573, 1715, 2111, 2194, 2807, 2902
LmnI GCTCC 9 cut(s) 36, 44, 164, 328, 833, 1141, 2566, 2599, 3057
LweI GCATC 7 cut(s) 1191, 1267, 1276, 1352, 2446, 2782, 2971
MaeI CTAG 8 cut(s) 423, 618, 981, 1061, 1205, 2127, 2469, 3109
MaeII ACGT 5 cut(s) 312, 375, 458, 1259, 1892
MaeIII GTNAC 6 cut(s) 368, 480, 712, 1410, 1801, 2363
MalI GATC 8 cut(s) 564, 1378, 1575, 1717, 2113, 2196, 2809, 2904
MbiI CCGCTC 1 cut(s) 159
MboI GATC 8 cut(s) 562, 1376, 1573, 1715, 2111, 2194, 2807, 2902
MflI RGATCY 5 cut(s) 1376, 1573, 1715, 2194, 2807
MhlI GDGCHC 6 cut(s) 41, 214, 513, 1138, 1192, 2374
MlyI GAGTC 8 cut(s) 311, 446, 904, 1418, 1910, 2707, 2728, 3011
MmeI TCCRAC 4 cut(s) 300, 1593, 1959, 2860
Mph1103I ATGCAT 2 cut(s) 1291, 1912
MroNI GCCGGC 2 cut(s) 106, 339
MroXI GAANNNNTTC 2 cut(s) 677, 1592
MslI CAYNNNNRTG 6 cut(s) 753, 1224, 1680, 2129, 2967, 3060
MspCI CTTAAG 2 cut(s) 401, 1865
MspI CCGG 9 cut(s) 107, 121, 196, 203, 246, 340, 462, 2037, 2995
Mva1269I GAATGC 3 cut(s) 1912, 2878, 3067
MvaI CCWGG 7 cut(s) 514, 1171, 1193, 2430, 2751, 2820, 2958
MvnI CGCG 3 cut(s) 154, 296, 2851
NaeI GCCGGC 2 cut(s) 108, 341
NciI CCSGG 4 cut(s) 121, 247, 463, 2037
NdeII GATC 8 cut(s) 562, 1376, 1573, 1715, 2111, 2194, 2807, 2902
NgoMIV GCCGGC 2 cut(s) 106, 339
NheI GCTAGC 2 cut(s) 980, 1204
NlaIV GGNNCC 6 cut(s) 212, 213, 420, 2165, 2196, 2404
NmeAIII GCCGAG 2 cut(s) 118, 208
NmuCI GTSAC 4 cut(s) 368, 480, 712, 1410
NsiI ATGCAT 2 cut(s) 1291, 1912
NspI RCATGY 2 cut(s) 914, 2512
NspV TTCGAA 1 cut(s) 2281
PagI TCATGA 1 cut(s) 390
PalAI GGCGCGCC 1 cut(s) 152
PasI CCCWGGG 1 cut(s) 513
PauI GCGCGC 1 cut(s) 152
PceI AGGCCT 1 cut(s) 188
PcsI WCGNNNNNNNCGW 2 cut(s) 17, 29
PctI GAATGC 3 cut(s) 1912, 2878, 3067
PdiI GCCGGC 2 cut(s) 108, 341
PdmI GAANNNNTTC 2 cut(s) 677, 1592
PfeI GAWTC 6 cut(s) 59, 242, 673, 1622, 1787, 2783
Pfl23II CGTACG 1 cut(s) 309
PflMI CCANNNNNTGG 1 cut(s) 1934
PinAI ACCGGT 1 cut(s) 2994
PleI GAGTC 8 cut(s) 310, 445, 903, 1417, 1910, 2706, 2727, 3010
PpsI GAGTC 8 cut(s) 310, 445, 903, 1417, 1910, 2706, 2727, 3010
PpuMI RGGWCCY 1 cut(s) 419
PsiI TTATAA 1 cut(s) 777
Psp124BI GAGCTC 1 cut(s) 41
Psp1406I AACGTT 1 cut(s) 375
Psp5II RGGWCCY 1 cut(s) 419
Psp6I CCWGG 7 cut(s) 512, 1169, 1191, 2428, 2749, 2818, 2956
PspFI CCCAGC 1 cut(s) 836
PspGI CCWGG 7 cut(s) 512, 1169, 1191, 2428, 2749, 2818, 2956
PspLI CGTACG 1 cut(s) 309
PspN4I GGNNCC 6 cut(s) 212, 213, 420, 2165, 2196, 2404
PspOMI GGGCCC 1 cut(s) 210
PspPI GGNCC 6 cut(s) 123, 210, 211, 419, 653, 1951
PspPPI RGGWCCY 1 cut(s) 419
PsrI GAACNNNNNNTAC 2 cut(s) 2046, 2078
PstI CTGCAG 1 cut(s) 2710
PstNI CAGNNNCTG 2 cut(s) 770, 1840
PsuI RGATCY 5 cut(s) 1376, 1573, 1715, 2194, 2807
PteI GCGCGC 1 cut(s) 152
RsaI GTAC 7 cut(s) 311, 1106, 1369, 1444, 2252, 2866, 3020
RsaNI GTAC 7 cut(s) 310, 1105, 1368, 1443, 2251, 2865, 3019
RseI CAYNNNNRTG 6 cut(s) 753, 1224, 1680, 2129, 2967, 3060
SacI GAGCTC 1 cut(s) 41
Sau3AI GATC 8 cut(s) 562, 1376, 1573, 1715, 2111, 2194, 2807, 2902
Sau96I GGNCC 6 cut(s) 123, 210, 211, 419, 653, 1951
SchI GAGTC 8 cut(s) 311, 446, 904, 1418, 1910, 2707, 2728, 3011
SduI GDGCHC 6 cut(s) 41, 214, 513, 1138, 1192, 2374
SfaNI GCATC 7 cut(s) 1191, 1267, 1276, 1352, 2446, 2782, 2971
SfcI CTRYAG 2 cut(s) 1415, 2706
SfuI TTCGAA 1 cut(s) 2281
SgsI GGCGCGCC 1 cut(s) 152
SinI GGWCC 1 cut(s) 419
SmiI ATTTAAAT 1 cut(s) 585
SmiMI CAYNNNNRTG 6 cut(s) 753, 1224, 1680, 2129, 2967, 3060
SmlI CTYRAG 2 cut(s) 401, 1865
SmoI CTYRAG 2 cut(s) 401, 1865
SseBI AGGCCT 1 cut(s) 188
SsiI CCGC 5 cut(s) 67, 70, 104, 157, 296
SspMI CTAG 8 cut(s) 423, 618, 981, 1061, 1205, 2127, 2469, 3109
SstI GAGCTC 1 cut(s) 41
StuI AGGCCT 1 cut(s) 188
StyI CCWWGG 3 cut(s) 42, 93, 132
SwaI ATTTAAAT 1 cut(s) 585
TaaI ACNGT 4 cut(s) 932, 2185, 2229, 2613
TaiI ACGT 5 cut(s) 315, 378, 461, 1262, 1895
TaqI TCGA 6 cut(s) 23, 1081, 1679, 2281, 2776, 2812
TatI WGTACW 3 cut(s) 1367, 1442, 3018
TauI GCSGC 3 cut(s) 70, 106, 159
TfiI GAWTC 6 cut(s) 59, 242, 673, 1622, 1787, 2783
TscAI CASTG 5 cut(s) 223, 1026, 1168, 1279, 2188
TseFI GTSAC 4 cut(s) 368, 480, 712, 1410
Tsp45I GTSAC 4 cut(s) 368, 480, 712, 1410
TspGWI ACGGA 4 cut(s) 299, 860, 2348, 2488
TspRI CASTG 5 cut(s) 223, 1026, 1168, 1279, 2188
Van91I CCANNNNNTGG 1 cut(s) 1934
Vha464I CTTAAG 2 cut(s) 401, 1865
VpaK11BI GGWCC 1 cut(s) 419
XapI RAATTY 8 cut(s) 693, 1005, 1044, 1298, 1687, 2144, 2884, 2897
XbaI TCTAGA 2 cut(s) 617, 1060
XceI RCATGY 2 cut(s) 914, 2512
XcmI CCANNNNNNNNNTGG 1 cut(s) 934
XmiI GTMKAC 2 cut(s) 934, 1387
XmnI GAANNNNTTC 2 cut(s) 677, 1592
XspI CTAG 8 cut(s) 423, 618, 981, 1061, 1205, 2127, 2469, 3109
Zsp2I ATGCAT 2 cut(s) 1291, 1912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.