AT5G58170

glycerophosphoryl diester phosphodiesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0013180
Physical Location & Seq
Reverse (-)
23540049 .. 23543345
3297 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G58170.1

Sequence Viewer

Length: 2253 bp
ATGCTGAGGTTTATCATATTTTTCTCCCTTTTTATACACTTATGTGTTGCAGCCCCCCAGACTCCTGCTGCTGCCGCGGCGGTTCCTGCTAAGAAATGGCTCACCCTTAATGGACAAGAGCCTGCCGTTGTGGCCAGAGGGGGCTTCTCGGGTCTTTTCCCTGAGTCAAGCGCCTCTGCAAACGACTTGGCTATTGGCACCAGCTCGCCTGGCCTCACAATGTTGTGCAACCTTCAGATGACTAAGGACGGTGTGGGCCTTTGCTTGTCAGATATCATACTTGACAATGCAACCACCATATCTTCAGTCTTCCCTAAAGCCCAGAAGACCTACAAGGTCAACGGTCAGGACCTCAAGGGATGGTTTGTCCTTGATTACGATGCCGACACCATCTTCAACAATGTCACTTTGGTCCAGAACATCTTCTCTCGGCCTAGCATCTTCGACGGCCAAATGTCGGTTTCCGCAGTGGAGGACGTCCTTGGAACCAAGCCTCCCAAGTTTTGGTTGAGCGTTCAGTACGATGCCTTCTACATGGAACACAAGCTGAGCCCAGCCGAGTACCTGAGAAGCTTGCAATTCCGCGGCATTAATGTCATCTCATCTCCAGAGATTGGTTTCTTGAAGAGCATCGGGATGGACGCGGGCAGGGCCAAGACAAAGCTCATATTCGAGTTCAAAGACCCAGAGGCAGTTGAGCCCACCACCAACAAGAAGTACAGTGAGATTCAGCAGAACCTCGCAGCCATCAAGGCCTTTGCTTCAGGCGTTCTTGTGCCCAAAGACTACATTTGGCCCATTGACTCAGCTAAGTACCTTAAGCCCGCCACCACTTTTGTGGCTGATGCCCACAAAGCCGGTCTAGAGGTCTATGCTTCAGGGTTTGCCAATGACTTGCGCACCAGCTTTAACTACAGCTATGATCCCTCCGCTGAGTATCTCCAGTTTGTGGACAATGGCCAGTTTTCTGTTGATGGCGTCATTACTGATTTCCCGCCAACAGCATCACAATCCATCACTTGCTTTTCTCACCAAAATGGCAATCTCCCCAAAGCAGGGCATGCGTTGGTTATAACTCACAATGGAGCAAGCGGAGACTATCCAGGCTGCACTGATCTGGCTTACCAGAAAGCAGTCGATGATGGAGCAGACGTGATCGACTGCTCTGTTCAGATGTCTAAAGACGGAATCGCTTTCTGCCATGATGCTGCAGACCTTACAGCAAGTACCACCGCCATGACTATTTTCATGTCCCGAGCCACAAGCGTTCCTGAGATCCAGCCTACCAATGGCATTTTTTCTTTTGATCTTACATGGGCTGAGATCCAGTCTGTGAAGCCACAAATAGAGAACCCCTTCACTGCCACGGGCTTCCAGAGAAATCCAGCAAACAAAAACGCTGGAAAGTTCATTACTCTTGCGGATTTCCTTGACTTCAGCAAAGCAAAGGCTGTCACCGGAGTTATGATCAACATCGAGAATGCTGCTTACCTAGCCTCAAAGAAGGGCCTAGGAGTCGTAGACGCAGTTAAGTCGGCTCTGGCCAAGTCCACACTCGACAAGCAATCAACTCAGAAAGTTTTGATTCAGTCAGATGACAGTTCGGTCCTGGCCAGTTTTGAGGCTGTCCCTCCGTACACGAGAGTCTTGAGCATTGACAAGGAAATCGGAGGTGCTCCCAAGCCATCAGTCGATGAAATCAAGAAGTACGCAGAAGCTGTCAATCTCTTGAGAACTTCCCTAGTCACTGTCTCCCAAAGTTTTACCACAGGGAAGACTAACGTTGTGGAGGAAATGCACAAAGGGAATATCTCTGTTTATGTTTCAGTGCTAAGAAACGAGTACATCTCCGTAGCGTTCGACTACTTCTCTGACCCTACAATAGAGCTTGCCACATTCATTTCAGGGAGTGGCGTTGATGGAGTCATCACGGAGTTCCCTGCCACCGCTACCAGATACTTAAAGAGTCCATGCTCAGATTTGAACAAAGAACAGCCCTATGCAATCTTACCAGCAGAAGCCGGTGGTCTAGTCGTCGTGGCAGACAAGGAAGCACAACCACCAGCTAGTGCCCCAAACCCGCCTCTTGAGGCCAAAGACGTGATTGATCCGCCTCTGCCTCCAGTTGCAAACTTGGCTGCCTCCAATGCAACTGGAGGAGCTCAGTCACATCCTCCTCCTGCTTCAGGAACCGTTGCCAACGCTGCAAATCTCGGTCTTTCCTTGCTGGCAATGTTGGCCTTAGGAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0016020 GO:0031224 GO:0031225 GO:0044425 GO:0048046
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDPD

Protein Analysis

750

Amino Acids

80.04

Weight (kDa)

5.1

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDPD PF03009 360 - 648 3.7e-25 Glycerophosphoryl diester phosphodiesterase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013180)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G58050 AT5G58170
fragaria_vesca FvH4_1g01240
malus_domestica MD02G1010300.v1.1 MD15G1155300.v1.1
prunus_persica Prupe.7G259800_v2.0.a1 Prupe.7G259800_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0086011
rosa_laevigata RLG00000015734
rosa_multiflora Rmu_ssc0000355.1_g000023
rosa_roxburghii Rroxscaffold_2G00154850
rosa_rugosa Rorug01G0465000 Rorug01G0465100
rosa_samantha Rh2AG014300 Rh2BG014800 Rh2CG015400 Rh2DG016700
rosa_wichuraiana Rw2G001270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1073
AasI GACNNNNNNGTC 1 cut(s) 1604
AatII GACGTC 1 cut(s) 480
Acc16I TGCGCA 1 cut(s) 899
AccB1I GGYRCC 1 cut(s) 197
AccB7I CCANNNNNTGG 3 cut(s) 504, 614, 949
AccI GTMKAC 1 cut(s) 1521
AccII CGCG 3 cut(s) 77, 585, 644
AclI AACGTT 1 cut(s) 1782
AclWI GGATC 4 cut(s) 917, 1270, 1318, 2102
AcoI YGGCCR 5 cut(s) 132, 448, 958, 1542, 1611
AcuI CTGAAG 6 cut(s) 218, 288, 747, 861, 1420, 2169
AcyI GRCGYC 2 cut(s) 477, 978
AfaI GTAC 8 cut(s) 521, 563, 719, 815, 1228, 1637, 1709, 1844
AfiI CCNNNNNNNGG 8 cut(s) 457, 504, 614, 949, 1055, 1056, 1289, 2186
AflII CTTAAG 1 cut(s) 818
AgsI TTSAA 4 cut(s) 397, 625, 679, 1984
AjiI CACGTC 2 cut(s) 1153, 2101
AjnI CCWGG 3 cut(s) 208, 1102, 1608
AleI CACNNNNGTG 2 cut(s) 42, 836
AloI GAACNNNNNNTCC 2 cut(s) 478, 510
Alw21I GWGCWC 2 cut(s) 1678, 2164
Alw26I GTCTC 2 cut(s) 1089, 1756
AlwI GGATC 4 cut(s) 917, 1270, 1318, 2102
AlwNI CAGNNNCTG 1 cut(s) 1718
Ama87I CYCGRG 2 cut(s) 148, 1254
ApeKI GCWGC 9 cut(s) 50, 68, 71, 743, 1107, 1208, 1484, 2138, 2204
AseI ATTAAT 1 cut(s) 591
Asp700I GAANNNNTTC 2 cut(s) 422, 1355
AspA2I CCTAGG 1 cut(s) 1510
AspLEI GCGC 2 cut(s) 173, 900
AspS9I GGNCC 7 cut(s) 256, 349, 412, 651, 795, 1507, 1606
AsuHPI GGTGA 3 cut(s) 94, 1022, 1447
AvaI CYCGRG 2 cut(s) 148, 1254
AvaII GGWCC 3 cut(s) 349, 412, 1606
AvrII CCTAGG 1 cut(s) 1510
AxyI CCTNAGG 1 cut(s) 2242
BaeGI GKGCMC 2 cut(s) 780, 2074
BalI TGGCCA 4 cut(s) 134, 960, 1544, 1613
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 3 cut(s) 554, 702, 2164
BarI GAAGNNNNNNTAC 2 cut(s) 512, 544
BauI CACGAG 1 cut(s) 1639
BbsI GAAGAC 3 cut(s) 301, 332, 1781
Bbv12I GWGCWC 2 cut(s) 1678, 2164
BbvCI CCTCAGC 1 cut(s) 5
BbvI GCAGC 9 cut(s) 55, 58, 62, 755, 1094, 1195, 1471, 2125, 2191
BccI CCATC 9 cut(s) 354, 398, 631, 755, 968, 1022, 1136, 1693, 1913
BceAI ACGGC 2 cut(s) 110, 463
BcgI CGANNNNNNTGC 4 cut(s) 1466, 1500, 1515, 1549
BciT130I CCWGG 3 cut(s) 210, 1104, 1610
BclI TGATCA 1 cut(s) 1467
BcoDI GTCTC 2 cut(s) 1089, 1756
BfaI CTAG 7 cut(s) 435, 863, 1493, 1511, 1742, 2030, 2067
BfmI CTRYAG 2 cut(s) 913, 1209
BfoI RGCGCY 1 cut(s) 174
BfrI CTTAAG 1 cut(s) 818
BglI GCCNNNNNGGC 2 cut(s) 131, 752
BlnI CCTAGG 1 cut(s) 1510
BlpI GCTNAGC 1 cut(s) 548
Bme1390I CCNGG 3 cut(s) 210, 1104, 1610
Bme18I GGWCC 3 cut(s) 349, 412, 1606
BmeT110I CYCGRG 2 cut(s) 148, 1254
BmgBI CACGTC 2 cut(s) 1153, 2101
BmgT120I GGNCC 7 cut(s) 256, 349, 412, 651, 795, 1507, 1606
BmiI GGNNCC 4 cut(s) 84, 199, 487, 2191
BmrFI CCNGG 3 cut(s) 210, 1104, 1610
BmsI GCATC 7 cut(s) 370, 447, 514, 639, 835, 1013, 1195
BpiI GAAGAC 3 cut(s) 301, 332, 1781
BplI GAGNNNNNCTC 2 cut(s) 1832, 1864
BpmI CTGGAG 4 cut(s) 591, 926, 2106, 2175
Bpu10I CCTNAGC 1 cut(s) 5
Bpu1102I GCTNAGC 1 cut(s) 548
BpuEI CTTGAG 4 cut(s) 338, 1669, 1750, 2108
BsaBI GATNNNNATC 1 cut(s) 1472
BsaHI GRCGYC 2 cut(s) 477, 978
BsaJI CCNNGG 5 cut(s) 75, 481, 583, 1365, 1510
BsaWI WCCGGW 1 cut(s) 1457
BsaXI ACNNNNNCTCC 4 cut(s) 478, 508, 1137, 1167
Bsc4I CCNNNNNNNGG 8 cut(s) 457, 504, 614, 949, 1055, 1056, 1289, 2186
Bse118I RCCGGY 2 cut(s) 857, 2021
Bse1I ACTGG 6 cut(s) 943, 961, 1327, 1614, 2123, 2158
Bse21I CCTNAGG 1 cut(s) 2242
Bse3DI GCAATG 1 cut(s) 2238
Bse8I GATNNNNATC 1 cut(s) 1472
BseBI CCWGG 3 cut(s) 210, 1104, 1610
BseDI CCNNGG 5 cut(s) 75, 481, 583, 1365, 1510
BseGI GGATG 3 cut(s) 365, 642, 2170
BseJI GATNNNNATC 1 cut(s) 1472
BseLI CCNNNNNNNGG 8 cut(s) 457, 504, 614, 949, 1055, 1056, 1289, 2186
BseMI GCAATG 1 cut(s) 2238
BseNI ACTGG 6 cut(s) 943, 961, 1327, 1614, 2123, 2158
BseRI GAGGAG 2 cut(s) 2166, 2172
BseSI GKGCMC 2 cut(s) 780, 2074
BseXI GCAGC 9 cut(s) 55, 58, 62, 755, 1094, 1195, 1471, 2125, 2191
BseYI CCCAGC 1 cut(s) 553
BsgI GTGCAG 1 cut(s) 1093
Bsh1236I CGCG 3 cut(s) 77, 585, 644
BshNI GGYRCC 1 cut(s) 197
BsiHKAI GWGCWC 2 cut(s) 1678, 2164
BsiHKCI CYCGRG 2 cut(s) 148, 1254
BsiSI CCGG 3 cut(s) 858, 1458, 2022
BslFI GGGAC 2 cut(s) 1237, 1613
BslI CCNNNNNNNGG 8 cut(s) 457, 504, 614, 949, 1055, 1056, 1289, 2186
BsmAI GTCTC 2 cut(s) 1089, 1756
BsmFI GGGAC 2 cut(s) 1237, 1613
BsmI GAATGC 1 cut(s) 1486
BsoBI CYCGRG 2 cut(s) 148, 1254
Bsp1286I GDGCHC 6 cut(s) 554, 702, 780, 1678, 2074, 2164
Bsp143I GATC 8 cut(s) 922, 1114, 1155, 1275, 1306, 1323, 1467, 2107
Bsp1720I GCTNAGC 1 cut(s) 548
BspFNI CGCG 3 cut(s) 77, 585, 644
BspLI GGNNCC 4 cut(s) 84, 199, 487, 2191
BspMAI CTGCAG 1 cut(s) 1213
BspPI GGATC 4 cut(s) 917, 1270, 1318, 2102
BspQI GCTCTTC 1 cut(s) 620
BspT107I GGYRCC 1 cut(s) 197
BspTI CTTAAG 1 cut(s) 818
BsrDI GCAATG 1 cut(s) 2238
BsrFI RCCGGY 2 cut(s) 857, 2021
BsrI ACTGG 6 cut(s) 943, 961, 1327, 1614, 2123, 2158
BssAI RCCGGY 2 cut(s) 857, 2021
BssECI CCNNGG 5 cut(s) 75, 481, 583, 1365, 1510
BssMI GATC 8 cut(s) 922, 1114, 1155, 1275, 1306, 1323, 1467, 2107
BssNI GRCGYC 2 cut(s) 477, 978
BssSI CACGAG 1 cut(s) 1639
BssT1I CCWWGG 2 cut(s) 481, 1510
Bst2BI CACGAG 1 cut(s) 1639
Bst2UI CCWGG 3 cut(s) 210, 1104, 1610
Bst4CI ACNGT 6 cut(s) 251, 344, 722, 1601, 1750, 2194
Bst6I CTCTTC 1 cut(s) 620
BstACI GRCGYC 2 cut(s) 477, 978
BstAFI CTTAAG 1 cut(s) 818
BstAPI GCANNNNNTGC 1 cut(s) 1061
BstC8I GCNNGC 9 cut(s) 123, 206, 575, 646, 825, 1062, 1090, 1890, 2229
BstDSI CCRYGG 3 cut(s) 75, 583, 1365
BstENI CCTNNNNNAGG 1 cut(s) 2184
BstF5I GGATG 3 cut(s) 365, 642, 2170
BstFNI CGCG 3 cut(s) 77, 585, 644
BstH2I RGCGCY 1 cut(s) 174
BstHHI GCGC 2 cut(s) 173, 900
BstKTI GATC 8 cut(s) 925, 1117, 1158, 1278, 1309, 1326, 1470, 2110
BstMAI GTCTC 2 cut(s) 1089, 1756
BstMBI GATC 8 cut(s) 922, 1114, 1155, 1275, 1306, 1323, 1467, 2107
BstNI CCWGG 3 cut(s) 210, 1104, 1610
BstNSI RCATGY 1 cut(s) 1064
BstSCI CCNGG 3 cut(s) 208, 1102, 1608
BstSFI CTRYAG 2 cut(s) 913, 1209
BstSLI GKGCMC 2 cut(s) 780, 2074
BstUI CGCG 3 cut(s) 77, 585, 644
BstV1I GCAGC 9 cut(s) 55, 58, 62, 755, 1094, 1195, 1471, 2125, 2191
BstV2I GAAGAC 3 cut(s) 301, 332, 1781
BstX2I RGATCY 2 cut(s) 1275, 1323
BstXI CCANNNNNNTGG 1 cut(s) 838
BstYI RGATCY 2 cut(s) 1275, 1323
Bsu36I CCTNAGG 1 cut(s) 2242
BtgI CCRYGG 3 cut(s) 75, 583, 1365
BtrI CACGTC 2 cut(s) 1153, 2101
BtsCI GGATG 3 cut(s) 365, 642, 2170
BtsI GCAGTG 2 cut(s) 474, 1359
BtsIMutI CAGTG 6 cut(s) 474, 727, 1110, 1359, 1746, 1833
Cac8I GCNNGC 9 cut(s) 123, 206, 575, 646, 825, 1062, 1090, 1890, 2229
CaiI CAGNNNCTG 1 cut(s) 1718
CfoI GCGC 2 cut(s) 173, 900
Cfr10I RCCGGY 2 cut(s) 857, 2021
Cfr13I GGNCC 7 cut(s) 256, 349, 412, 651, 795, 1507, 1606
Cfr42I CCGCGG 2 cut(s) 78, 586
CseI GACGC 3 cut(s) 650, 967, 1532
Csp6I GTAC 8 cut(s) 520, 562, 718, 814, 1227, 1636, 1708, 1843
CspCI CAANNNNNGTGG 2 cut(s) 817, 852
CviAII CATG 7 cut(s) 535, 1061, 1202, 1237, 1249, 1314, 1971
CviQI GTAC 8 cut(s) 520, 562, 718, 814, 1227, 1636, 1708, 1843
DpnI GATC 8 cut(s) 924, 1116, 1157, 1277, 1308, 1325, 1469, 2109
DpnII GATC 8 cut(s) 922, 1114, 1155, 1275, 1306, 1323, 1467, 2107
DrdI GACNNNNNNGTC 1 cut(s) 1604
DseDI GACNNNNNNGTC 1 cut(s) 1604
EaeI YGGCCR 5 cut(s) 132, 448, 958, 1542, 1611
Eam1104I CTCTTC 1 cut(s) 620
EarI CTCTTC 1 cut(s) 620
EciI GGCGGA 1 cut(s) 2100
Ecl136II GAGCTC 1 cut(s) 2162
Eco130I CCWWGG 2 cut(s) 481, 1510
Eco147I AGGCCT 1 cut(s) 755
Eco24I GRGCYC 3 cut(s) 554, 702, 2164
Eco32I GATATC 1 cut(s) 274
Eco47I GGWCC 3 cut(s) 349, 412, 1606
Eco53kI GAGCTC 1 cut(s) 2162
Eco57I CTGAAG 6 cut(s) 218, 288, 747, 861, 1420, 2169
Eco81I CCTNAGG 1 cut(s) 2242
Eco88I CYCGRG 2 cut(s) 148, 1254
EcoICRI GAGCTC 1 cut(s) 2162
EcoNI CCTNNNNNAGG 1 cut(s) 2184
EcoO109I RGGNCCY 2 cut(s) 349, 1507
EcoRII CCWGG 3 cut(s) 208, 1102, 1608
EcoRV GATATC 1 cut(s) 274
EcoT14I CCWWGG 2 cut(s) 481, 1510
EcoT38I GRGCYC 3 cut(s) 554, 702, 2164
ErhI CCWWGG 2 cut(s) 481, 1510
FaeI CATG 7 cut(s) 538, 1064, 1205, 1240, 1252, 1317, 1974
FaqI GGGAC 2 cut(s) 1237, 1613
FatI CATG 7 cut(s) 534, 1060, 1201, 1236, 1248, 1313, 1970
FauI CCCGC 4 cut(s) 637, 832, 1002, 2088
FbaI TGATCA 1 cut(s) 1467
FblI GTMKAC 1 cut(s) 1521
FokI GGATG 3 cut(s) 372, 649, 2157
FriOI GRGCYC 3 cut(s) 554, 702, 2164
FspBI CTAG 7 cut(s) 435, 863, 1493, 1511, 1742, 2030, 2067
FspI TGCGCA 1 cut(s) 899
GlaI GCGC 2 cut(s) 172, 899
GsaI CCCAGC 1 cut(s) 557
GsuI CTGGAG 4 cut(s) 591, 926, 2106, 2175
HaeII RGCGCY 1 cut(s) 174
HapII CCGG 3 cut(s) 858, 1458, 2022
HgaI GACGC 3 cut(s) 650, 967, 1532
HhaI GCGC 2 cut(s) 173, 900
Hin1I GRCGYC 2 cut(s) 477, 978
Hin1II CATG 7 cut(s) 538, 1064, 1205, 1240, 1252, 1317, 1974
Hin6I GCGC 2 cut(s) 171, 898
HinP1I GCGC 2 cut(s) 171, 898
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HindIII AAGCTT 1 cut(s) 571
HpaII CCGG 3 cut(s) 858, 1458, 2022
HphI GGTGA 3 cut(s) 94, 1022, 1447
Hpy166II GTNNAC 5 cut(s) 340, 952, 1522, 1551, 1638
Hpy188I TCNGA 8 cut(s) 237, 271, 1173, 1575, 1594, 1670, 1873, 1978
Hpy8I GTNNAC 5 cut(s) 340, 952, 1522, 1551, 1638
Hpy99I CGWCG 2 cut(s) 449, 2039
HpyAV CCTTC 4 cut(s) 242, 538, 1366, 1498
HpyCH4III ACNGT 6 cut(s) 251, 344, 722, 1601, 1750, 2194
HpyCH4IV ACGT 4 cut(s) 477, 1152, 1782, 2100
HpySE526I ACGT 4 cut(s) 477, 1152, 1782, 2100
Hsp92I GRCGYC 2 cut(s) 477, 978
Hsp92II CATG 7 cut(s) 538, 1064, 1205, 1240, 1252, 1317, 1974
HspAI GCGC 2 cut(s) 171, 898
Ksp22I TGATCA 1 cut(s) 1467
KspI CCGCGG 2 cut(s) 78, 586
Kzo9I GATC 8 cut(s) 922, 1114, 1155, 1275, 1306, 1323, 1467, 2107
LguI GCTCTTC 1 cut(s) 620
LmnI GCTCC 4 cut(s) 1085, 1145, 1681, 2159
Lsp1109I GCAGC 9 cut(s) 55, 58, 62, 755, 1094, 1195, 1471, 2125, 2191
LweI GCATC 7 cut(s) 370, 447, 514, 639, 835, 1013, 1195
MaeI CTAG 7 cut(s) 435, 863, 1493, 1511, 1742, 2030, 2067
MaeII ACGT 4 cut(s) 477, 1152, 1782, 2100
MaeIII GTNAC 4 cut(s) 403, 1453, 1744, 2166
MalI GATC 8 cut(s) 924, 1116, 1157, 1277, 1308, 1325, 1469, 2109
MboI GATC 8 cut(s) 922, 1114, 1155, 1275, 1306, 1323, 1467, 2107
MboII GAAGA 8 cut(s) 294, 301, 337, 385, 415, 433, 637, 1786
MflI RGATCY 2 cut(s) 1275, 1323
MhlI GDGCHC 6 cut(s) 554, 702, 780, 1678, 2074, 2164
MlsI TGGCCA 4 cut(s) 134, 960, 1544, 1613
MluCI AATT 1 cut(s) 578
MluNI TGGCCA 4 cut(s) 134, 960, 1544, 1613
MlyI GAGTC 7 cut(s) 55, 173, 797, 1524, 1653, 1932, 1975
Mox20I TGGCCA 4 cut(s) 134, 960, 1544, 1613
MroXI GAANNNNTTC 2 cut(s) 422, 1355
MscI TGGCCA 4 cut(s) 134, 960, 1544, 1613
MseI TTAA 6 cut(s) 108, 591, 819, 909, 1530, 1961
MslI CAYNNNNRTG 5 cut(s) 42, 635, 836, 1035, 1235
Msp20I TGGCCA 4 cut(s) 134, 960, 1544, 1613
MspA1I CMGCKG 3 cut(s) 77, 585, 932
MspCI CTTAAG 1 cut(s) 818
MspI CCGG 3 cut(s) 858, 1458, 2022
MspR9I CCNGG 3 cut(s) 210, 1104, 1610
Mva1269I GAATGC 1 cut(s) 1486
MvaI CCWGG 3 cut(s) 210, 1104, 1610
MvnI CGCG 3 cut(s) 77, 585, 644
NdeII GATC 8 cut(s) 922, 1114, 1155, 1275, 1306, 1323, 1467, 2107
NlaIII CATG 7 cut(s) 538, 1064, 1205, 1240, 1252, 1317, 1974
NlaIV GGNNCC 4 cut(s) 84, 199, 487, 2191
NmeAIII GCCGAG 2 cut(s) 409, 583
NmuCI GTSAC 4 cut(s) 403, 1453, 1744, 2166
NsbI TGCGCA 1 cut(s) 899
NspI RCATGY 1 cut(s) 1064
OliI CACNNNNGTG 2 cut(s) 42, 836
PaeI GCATGC 1 cut(s) 1064
PceI AGGCCT 1 cut(s) 755
PciSI GCTCTTC 1 cut(s) 620
PctI GAATGC 1 cut(s) 1486
PdmI GAANNNNTTC 2 cut(s) 422, 1355
PfeI GAWTC 3 cut(s) 727, 1188, 1585
PflMI CCANNNNNTGG 3 cut(s) 504, 614, 949
PleI GAGTC 7 cut(s) 55, 172, 797, 1523, 1652, 1931, 1974
PpsI GAGTC 7 cut(s) 55, 172, 797, 1523, 1652, 1931, 1974
PpuMI RGGWCCY 1 cut(s) 349
PshBI ATTAAT 1 cut(s) 591
PsiI TTATAA 1 cut(s) 1073
Psp124BI GAGCTC 1 cut(s) 2164
Psp1406I AACGTT 1 cut(s) 1782
Psp5II RGGWCCY 1 cut(s) 349
Psp6I CCWGG 3 cut(s) 208, 1102, 1608
PspFI CCCAGC 1 cut(s) 553
PspGI CCWGG 3 cut(s) 208, 1102, 1608
PspN4I GGNNCC 4 cut(s) 84, 199, 487, 2191
PspPI GGNCC 7 cut(s) 256, 349, 412, 651, 795, 1507, 1606
PspPPI RGGWCCY 1 cut(s) 349
PstI CTGCAG 1 cut(s) 1213
PstNI CAGNNNCTG 1 cut(s) 1718
PsuI RGATCY 2 cut(s) 1275, 1323
RsaI GTAC 8 cut(s) 521, 563, 719, 815, 1228, 1637, 1709, 1844
RsaNI GTAC 8 cut(s) 520, 562, 718, 814, 1227, 1636, 1708, 1843
RseI CAYNNNNRTG 5 cut(s) 42, 635, 836, 1035, 1235
SacI GAGCTC 1 cut(s) 2164
SacII CCGCGG 2 cut(s) 78, 586
SapI GCTCTTC 1 cut(s) 620
SaqAI TTAA 6 cut(s) 108, 591, 819, 909, 1530, 1961
Sau3AI GATC 8 cut(s) 922, 1114, 1155, 1275, 1306, 1323, 1467, 2107
Sau96I GGNCC 7 cut(s) 256, 349, 412, 651, 795, 1507, 1606
SchI GAGTC 7 cut(s) 55, 173, 797, 1524, 1653, 1932, 1975
ScrFI CCNGG 3 cut(s) 210, 1104, 1610
SduI GDGCHC 6 cut(s) 554, 702, 780, 1678, 2074, 2164
SfaNI GCATC 7 cut(s) 370, 447, 514, 639, 835, 1013, 1195
SfcI CTRYAG 2 cut(s) 913, 1209
Sfr303I CCGCGG 2 cut(s) 78, 586
SgrBI CCGCGG 2 cut(s) 78, 586
SinI GGWCC 3 cut(s) 349, 412, 1606
SmiMI CAYNNNNRTG 5 cut(s) 42, 635, 836, 1035, 1235
SmlI CTYRAG 5 cut(s) 353, 818, 1648, 1729, 2087
SmoI CTYRAG 5 cut(s) 353, 818, 1648, 1729, 2087
SphI GCATGC 1 cut(s) 1064
Sse9I AATT 1 cut(s) 578
SseBI AGGCCT 1 cut(s) 755
SspMI CTAG 7 cut(s) 435, 863, 1493, 1511, 1742, 2030, 2067
SstI GAGCTC 1 cut(s) 2164
StuI AGGCCT 1 cut(s) 755
StyD4I CCNGG 3 cut(s) 208, 1102, 1608
StyI CCWWGG 2 cut(s) 481, 1510
TaaI ACNGT 6 cut(s) 251, 344, 722, 1601, 1750, 2194
TaiI ACGT 4 cut(s) 480, 1155, 1785, 2103
TaqI TCGA 8 cut(s) 444, 672, 1137, 1158, 1476, 1557, 1692, 1860
TaqII GACCGA 2 cut(s) 1594, 2204
TasI AATT 1 cut(s) 578
TatI WGTACW 2 cut(s) 717, 1842
TauI GCSGC 3 cut(s) 77, 80, 588
TfiI GAWTC 3 cut(s) 727, 1188, 1585
Tru1I TTAA 6 cut(s) 108, 591, 819, 909, 1530, 1961
Tru9I TTAA 6 cut(s) 108, 591, 819, 909, 1530, 1961
TscAI CASTG 6 cut(s) 474, 727, 1117, 1366, 1753, 1833
TseFI GTSAC 4 cut(s) 403, 1453, 1744, 2166
TseI GCWGC 9 cut(s) 50, 68, 71, 743, 1107, 1208, 1484, 2138, 2204
Tsp45I GTSAC 4 cut(s) 403, 1453, 1744, 2166
TspDTI ATGAA 4 cut(s) 1237, 1399, 1710, 1888
TspGWI ACGGA 4 cut(s) 1200, 1623, 1840, 1946
TspRI CASTG 6 cut(s) 474, 727, 1117, 1366, 1753, 1833
Van91I CCANNNNNTGG 3 cut(s) 504, 614, 949
Vha464I CTTAAG 1 cut(s) 818
VpaK11BI GGWCC 3 cut(s) 349, 412, 1606
VspI ATTAAT 1 cut(s) 591
XagI CCTNNNNNAGG 1 cut(s) 2184
XbaI TCTAGA 1 cut(s) 862
XceI RCATGY 1 cut(s) 1064
XcmI CCANNNNNNNNNTGG 2 cut(s) 835, 1286
XmaJI CCTAGG 1 cut(s) 1510
XmiI GTMKAC 1 cut(s) 1521
XmnI GAANNNNTTC 2 cut(s) 422, 1355
XspI CTAG 7 cut(s) 435, 863, 1493, 1511, 1742, 2030, 2067
ZraI GACGTC 1 cut(s) 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.