RLG00000015734

glycerophosphoryl diester phosphodiesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0013180
Physical Location & Seq
Reverse (-)
1093282 .. 1096808
3527 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015734

Sequence Viewer

Length: 2364 bp
ATGATGAGATGTTTGCTTCTCATTTCCCTGTTGATCCATTCAGCATTGGCCCAGGATGTAGGGCCGGAGGAGCCTCCTCCATTAGGCCAGAAAGGAGGGCCGGATGAGCCCCCTCAAGGAGGAGGGCCGGAGGAGCCGCCTCAAGGGAAGAAATGGCTGACATTAAAGGGTCAAGAGCCCCTGATTGTAGCTCGTGGAGGGCTATCGGGGCTCTTTCCAGAATCGAGCAATTATGCTAATAGTATGGCCAAGTCCCTGAGTTTGATAGGCACAGCTCTCTACTGCAATCTACAATTAACGAAAGATAGCGTGGGAATATGCCTGTCAAACATTCTGCTTGATAATACAACAACAATATCTACGGTACACCCTAATGGCGACAACACTTACAATGTTAATGGGAAGGAAGTTCATGGGTGGTTCGCTTTAGATTTCACAGCAGATCAGCTGTCAAAGTTGACATTGACTCAAAACATCTTTTCCAGACCGGATCAATTTGACGATGCTTTGCCTATATCGACGGTTGAGGATGTTTTAAATAGCAAACCTGACCAGTTTTGGTTGCATGTGCCGTACGATGCATTTTATAACGAACACAAAATCAGTCCAGCGGCATTTGTACAAAGGCAAATGAAAGTTGCAGACATCAATTTCCTTTCATCTCCTGAGATTGGTTTCTTGAAAACCATCGGTGGAAAAGTGGACAAATTGAAGACCAAGCTCATCTTCGAGTTCCTAGGCCCCGATGAGATTGAACCCACAACTAAACAAAAGTACGGTGAATTGCTGAAGAATCTTGGAATGATCAAGTCACTAGCAGCTGGGATCCTTGTTCCAAAAGAATTCATATACCCTGTTACCCCAAATAATTATTTGGATGCTCCCACTACTCTGGTGGCAGATGCTCACAAAGAAGGGGTGGAAGTATATGCTAAAGGCTTCGCAAACGATCAAAATATCCCTTACAACTATAGTATGGATGCAACAGCAGAAATCCAACAGTTCGTAGATAATTCTGATCAATTTTCTGTTGATGGGGTGCTTACAGATTTCCCACCTACGGCATCAGAAGCCATTGCATGCTTTTCGCATAACAAGGATGCCAAGCCTTACAAAGGAAGTCCATTGATCATAAGTAGAAATGGAGCGAGTGGGAACTATCCTGGTTGCACAGACCTTGCTTATCAGAGAGCAGTAGATGATGGCACTGACATAATCGATTGCTCAGTCCAAATGTCAAGTGATGGAGTTGCCTTCTGCTTAGATTCCATAGACCTCAACTCAGGCACCAATGCATTGACTCAATTTATGACCAAGAGTGAGACTATCCCTGAACTTCAACCTGAAGCTGGAGTCTTCTCGTTCCAGCTCACATGGGAGGAGATTCAGTCCTTGAAACCCCAACTGCAAAGTCCCCATGGACCCAAGGGAGACTTGTATAGAAACCCAGCTAACAAGGATGCAGGCAAACTGGTGACCCTTAACGAATTCCTAGAGTTCGCCAAGAAAAAGGCAACTACTGGAATTTTGATCGACATTGAGAATGCACCATACCTAGCATCAAAGGCCGGTCTGGACATTGTTGGTACCGTAATCTCTGCCTTGAAAAATGCCTCACTCGACAAGCAATCGACTCAACAAGTCATGATCAAATCAAATGACACTTCAGTCCTGTCCAAATTCGCTGATGAGAAAACATACAAAAGAGTGTTCAGCATTAAGGAGCAAGTAGGTTCTGCACCAAAGCAATCGATTGACGAGATCAAGAAGTTTGCAGATGCAGTAACTGTCGGCAAAACTTCGGTTATTCAGTCCAACTCTTTCTTCATCTCGGGAGAAACTGGCATCATCAAGGAATTGAAGGCTGCAAATCTTTCAGTGTACATCCATTACCTGAAAAACGAATTCGTCAGTCTCATGTTCGATTATCTCTCAGACCCCATTACCGAAATAGCTACATATGCTCAAGGATTCCGTGTTGATGGAATTGTGACTGATTTTCCAGGAACTGCTAGCAAATATATGAAATGTGCATGCACTGATCTTAACCCTCTGGCCAATATCCCATATCCGATTTTGCCAATTGAACCCGGTTCTCTCCTCAGCTTGCTACCCCCTGAGAAACTGGCACCAGCAGCAGCTCCCCTCCCAGCTCTCGAAGCTAGTAGCATAGTTGACCCACCACTTCCTCCGGTGGCACCCAAAAAGGAGACCAAGCCCGACTCAGACTCCGCGTCCGGTGACAAGCCTGCTCAGGCTCCTGCACCGACAGGAAAATCAAGCGCATTGGCAAATGCTGCAGCAAACTGGGGTGTTTCTTTGGTAGCAATAATGGTGCTCAGCTTATTGTCTATGGGAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0016020 GO:0031224 GO:0031225 GO:0044425 GO:0048046
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDPD

Protein Analysis

788

Amino Acids

84.85

Weight (kDa)

4.93

Isoelectric Point (pI)

39.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDPD PF03009 382 - 670 1.7e-24 Glycerophosphoryl diester phosphodiesterase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013180)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G58050 AT5G58170
fragaria_vesca FvH4_1g01240
malus_domestica MD02G1010300.v1.1 MD15G1155300.v1.1
prunus_persica Prupe.7G259800_v2.0.a1 Prupe.7G259800_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0086011
rosa_laevigata RLG00000015734
rosa_multiflora Rmu_ssc0000355.1_g000023
rosa_roxburghii Rroxscaffold_2G00154850
rosa_rugosa Rorug01G0465000 Rorug01G0465100
rosa_samantha Rh2AG014300 Rh2BG014800 Rh2CG015400 Rh2DG016700
rosa_wichuraiana Rw2G001270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 588
AasI GACNNNNNNGTC 1 cut(s) 1667
Acc65I GGTACC 1 cut(s) 1586
AccB1I GGYRCC 4 cut(s) 1286, 1586, 2128, 2197
AccII CGCG 1 cut(s) 2234
AciI CCGC 3 cut(s) 137, 611, 2232
AclWI GGATC 4 cut(s) 28, 498, 820, 833
AcoI YGGCCR 2 cut(s) 246, 2055
AcsI RAATTY 5 cut(s) 842, 1487, 1524, 1679, 1904
AcuI CTGAAG 3 cut(s) 809, 1365, 1650
AfaI GTAC 6 cut(s) 366, 575, 621, 776, 1588, 1883
AfiI CCNNNNNNNGG 8 cut(s) 83, 116, 119, 143, 671, 1060, 1115, 1349
AgsI TTSAA 8 cut(s) 682, 712, 755, 1340, 1396, 1606, 1861, 2087
AhdI GACNNNNNGTC 1 cut(s) 2233
AjnI CCWGG 3 cut(s) 51, 1162, 2002
AjuI GAANNNNNNNTTGG 4 cut(s) 710, 742, 1808, 1840
Alw21I GWGCWC 1 cut(s) 2340
Alw26I GTCTC 4 cut(s) 1316, 1425, 1919, 2204
AlwI GGATC 4 cut(s) 28, 498, 820, 833
AlwNI CAGNNNCTG 2 cut(s) 1787, 2009
Ama87I CYCGRG 1 cut(s) 1831
AoxI GGCC 9 cut(s) 48, 62, 85, 98, 125, 246, 739, 1566, 2055
ApeKI GCWGC 6 cut(s) 818, 1865, 2135, 2138, 2297, 2300
ApoI RAATTY 5 cut(s) 842, 1487, 1524, 1679, 1904
Asp718I GGTACC 1 cut(s) 1586
AspA2I CCTAGG 1 cut(s) 736
AspLEI GCGC 1 cut(s) 2285
AspS9I GGNCC 6 cut(s) 49, 62, 98, 125, 740, 1421
AsuC2I CCSGG 1 cut(s) 2091
AsuHPI GGTGA 3 cut(s) 791, 1486, 2252
AsuNHI GCTAGC 1 cut(s) 2012
AvaI CYCGRG 1 cut(s) 1831
AvaII GGWCC 1 cut(s) 1421
AvrII CCTAGG 1 cut(s) 736
BalI TGGCCA 2 cut(s) 248, 2057
BamHI GGATCC 1 cut(s) 825
BanI GGYRCC 4 cut(s) 1286, 1586, 2128, 2197
BanII GRGCYC 3 cut(s) 111, 180, 213
BauI CACGAG 1 cut(s) 192
BbsI GAAGAC 2 cut(s) 719, 1348
Bbv12I GWGCWC 1 cut(s) 2340
BbvCI CCTCAGC 1 cut(s) 2102
BbvI GCAGC 6 cut(s) 830, 1852, 2147, 2150, 2284, 2312
BccI CCATC 5 cut(s) 695, 1028, 1196, 1238, 1976
BceAI ACGGC 2 cut(s) 556, 1077
BcgI CGANNNNNNTGC 2 cut(s) 1068, 1102
BciT130I CCWGG 3 cut(s) 53, 1164, 2004
BclI TGATCA 4 cut(s) 804, 1018, 1128, 1647
BcnI CCSGG 1 cut(s) 2091
BcoDI GTCTC 4 cut(s) 1316, 1425, 1919, 2204
BfaI CTAG 6 cut(s) 737, 815, 1493, 1556, 2013, 2163
BfmI CTRYAG 2 cut(s) 970, 2298
BisI GCNGC 8 cut(s) 137, 612, 819, 1866, 2136, 2139, 2298, 2301
BlnI CCTAGG 1 cut(s) 736
BlpI GCTNAGC 1 cut(s) 2339
BlsI GCNGC 8 cut(s) 138, 613, 820, 1867, 2137, 2140, 2299, 2302
Bme1390I CCNGG 4 cut(s) 53, 1164, 2004, 2091
Bme18I GGWCC 1 cut(s) 1421
BmeRI GACNNNNNGTC 1 cut(s) 2233
BmeT110I CYCGRG 1 cut(s) 1831
BmgT120I GGNCC 6 cut(s) 49, 62, 98, 125, 740, 1421
BmrFI CCNGG 4 cut(s) 53, 1164, 2004, 2091
BmrI ACTGGG 1 cut(s) 2317
BmtI GCTAGC 1 cut(s) 2016
BmuI ACTGGG 1 cut(s) 2317
BpiI GAAGAC 2 cut(s) 719, 1348
BpmI CTGGAG 1 cut(s) 1371
Bpu10I CCTNAGC 2 cut(s) 2102, 2253
Bpu1102I GCTNAGC 1 cut(s) 2339
BpuEI CTTGAG 3 cut(s) 99, 126, 1950
BpuMI CCSGG 1 cut(s) 2091
Bsa29I ATCGAT 2 cut(s) 1218, 1751
BsaI GGTCTC 1 cut(s) 2204
BsaJI CCNNGG 4 cut(s) 51, 736, 1417, 1425
BsaWI WCCGGW 3 cut(s) 487, 2191, 2237
BsaXI ACNNNNNCTCC 4 cut(s) 1373, 1403, 2213, 2243
Bsc4I CCNNNNNNNGG 8 cut(s) 83, 116, 119, 143, 671, 1060, 1115, 1349
Bse118I RCCGGY 1 cut(s) 1568
Bse1I ACTGG 6 cut(s) 553, 1476, 1525, 1846, 2130, 2312
Bse3DI GCAATG 1 cut(s) 1074
BseBI CCWGG 3 cut(s) 53, 1164, 2004
BseCI ATCGAT 2 cut(s) 1218, 1751
BseDI CCNNGG 4 cut(s) 51, 736, 1417, 1425
BseGI GGATG 8 cut(s) 61, 109, 535, 883, 985, 1105, 1465, 1884
BseLI CCNNNNNNNGG 8 cut(s) 83, 116, 119, 143, 671, 1060, 1115, 1349
BseMI GCAATG 1 cut(s) 1074
BseNI ACTGG 6 cut(s) 553, 1476, 1525, 1846, 2130, 2312
BseRI GAGGAG 6 cut(s) 66, 83, 135, 146, 1394, 2090
BseXI GCAGC 6 cut(s) 830, 1852, 2147, 2150, 2284, 2312
BseYI CCCAGC 3 cut(s) 821, 1447, 2149
BsgI GTGCAG 2 cut(s) 1722, 2247
Bsh1236I CGCG 1 cut(s) 2234
BshFI GGCC 9 cut(s) 50, 64, 87, 100, 127, 248, 741, 1568, 2057
BshNI GGYRCC 4 cut(s) 1286, 1586, 2128, 2197
BshVI ATCGAT 2 cut(s) 1218, 1751
BsiHKAI GWGCWC 1 cut(s) 2340
BsiHKCI CYCGRG 1 cut(s) 1831
BsiSI CCGG 8 cut(s) 65, 101, 128, 488, 1569, 2091, 2192, 2238
BsiWI CGTACG 1 cut(s) 573
BslFI GGGAC 2 cut(s) 238, 1398
BslI CCNNNNNNNGG 8 cut(s) 83, 116, 119, 143, 671, 1060, 1115, 1349
BsmAI GTCTC 4 cut(s) 1316, 1425, 1919, 2204
BsmFI GGGAC 2 cut(s) 238, 1398
BsmI GAATGC 1 cut(s) 1549
BsnI GGCC 9 cut(s) 50, 64, 87, 100, 127, 248, 741, 1568, 2057
Bso31I GGTCTC 1 cut(s) 2204
BsoBI CYCGRG 1 cut(s) 1831
Bsp1286I GDGCHC 4 cut(s) 111, 180, 213, 2340
Bsp1407I TGTACA 2 cut(s) 619, 1881
Bsp1720I GCTNAGC 1 cut(s) 2339
Bsp19I CCATGG 1 cut(s) 1417
BspACI CCGC 3 cut(s) 137, 611, 2232
BspANI GGCC 9 cut(s) 50, 64, 87, 100, 127, 248, 741, 1568, 2057
BspDI ATCGAT 2 cut(s) 1218, 1751
BspFNI CGCG 1 cut(s) 2234
BspHI TCATGA 1 cut(s) 1644
BspMAI CTGCAG 1 cut(s) 2302
BspOI GCTAGC 1 cut(s) 2016
BspPI GGATC 4 cut(s) 28, 498, 820, 833
BspT107I GGYRCC 4 cut(s) 1286, 1586, 2128, 2197
BspTNI GGTCTC 1 cut(s) 2204
BsrDI GCAATG 1 cut(s) 1074
BsrFI RCCGGY 1 cut(s) 1568
BsrGI TGTACA 2 cut(s) 619, 1881
BsrI ACTGG 6 cut(s) 553, 1476, 1525, 1846, 2130, 2312
BssAI RCCGGY 1 cut(s) 1568
BssECI CCNNGG 4 cut(s) 51, 736, 1417, 1425
BssSI CACGAG 1 cut(s) 192
BssT1I CCWWGG 3 cut(s) 736, 1417, 1425
Bst2BI CACGAG 1 cut(s) 192
Bst2UI CCWGG 3 cut(s) 53, 1164, 2004
Bst4CI ACNGT 6 cut(s) 364, 523, 779, 1002, 1591, 1789
BstAPI GCANNNNNTGC 1 cut(s) 2297
BstAUI TGTACA 2 cut(s) 619, 1881
BstC8I GCNNGC 6 cut(s) 1081, 1465, 2014, 2035, 2108, 2250
BstDSI CCRYGG 1 cut(s) 1417
BstEII GGTNACC 1 cut(s) 1474
BstENI CCTNNNNNAGG 3 cut(s) 81, 117, 1113
BstF5I GGATG 8 cut(s) 61, 109, 535, 883, 985, 1105, 1465, 1884
BstFNI CGCG 1 cut(s) 2234
BstHHI GCGC 1 cut(s) 2285
BstMAI GTCTC 4 cut(s) 1316, 1425, 1919, 2204
BstNI CCWGG 3 cut(s) 53, 1164, 2004
BstNSI RCATGY 3 cut(s) 569, 1083, 2037
BstPI GGTNACC 1 cut(s) 1474
BstSCI CCNGG 4 cut(s) 51, 1162, 2002, 2089
BstSFI CTRYAG 2 cut(s) 970, 2298
BstUI CGCG 1 cut(s) 2234
BstV1I GCAGC 6 cut(s) 830, 1852, 2147, 2150, 2284, 2312
BstV2I GAAGAC 2 cut(s) 719, 1348
BstX2I RGATCY 1 cut(s) 825
BstXI CCANNNNNNTGG 1 cut(s) 892
BstYI RGATCY 1 cut(s) 825
Bsu15I ATCGAT 2 cut(s) 1218, 1751
BsuRI GGCC 9 cut(s) 50, 64, 87, 100, 127, 248, 741, 1568, 2057
BsuTUI ATCGAT 2 cut(s) 1218, 1751
BtgI CCRYGG 1 cut(s) 1417
BtsCI GGATG 8 cut(s) 61, 109, 535, 883, 985, 1105, 1465, 1884
BtsIMutI CAGTG 3 cut(s) 1206, 1884, 2037
Cac8I GCNNGC 6 cut(s) 1081, 1465, 2014, 2035, 2108, 2250
CaiI CAGNNNCTG 2 cut(s) 1787, 2009
CciI TCATGA 1 cut(s) 1644
CfoI GCGC 1 cut(s) 2285
Cfr10I RCCGGY 1 cut(s) 1568
Cfr13I GGNCC 6 cut(s) 49, 62, 98, 125, 740, 1421
ClaI ATCGAT 2 cut(s) 1218, 1751
CseI GACGC 1 cut(s) 2223
Csp6I GTAC 6 cut(s) 365, 574, 620, 775, 1587, 1882
CviAII CATG 8 cut(s) 413, 566, 1080, 1374, 1418, 1645, 1918, 2034
CviQI GTAC 6 cut(s) 365, 574, 620, 775, 1587, 1882
DraI TTTAAA 1 cut(s) 537
DrdI GACNNNNNNGTC 1 cut(s) 1667
DriI GACNNNNNGTC 1 cut(s) 2233
DseDI GACNNNNNNGTC 1 cut(s) 1667
EaeI YGGCCR 2 cut(s) 246, 2055
Eam1105I GACNNNNNGTC 1 cut(s) 2233
Eco130I CCWWGG 3 cut(s) 736, 1417, 1425
Eco24I GRGCYC 3 cut(s) 111, 180, 213
Eco31I GGTCTC 1 cut(s) 2204
Eco47I GGWCC 1 cut(s) 1421
Eco57I CTGAAG 3 cut(s) 809, 1365, 1650
Eco88I CYCGRG 1 cut(s) 1831
Eco91I GGTNACC 1 cut(s) 1474
EcoNI CCTNNNNNAGG 3 cut(s) 81, 117, 1113
EcoO109I RGGNCCY 1 cut(s) 740
EcoO65I GGTNACC 1 cut(s) 1474
EcoRI GAATTC 3 cut(s) 842, 1487, 1904
EcoRII CCWGG 3 cut(s) 51, 1162, 2002
EcoT14I CCWWGG 3 cut(s) 736, 1417, 1425
EcoT22I ATGCAT 2 cut(s) 583, 1297
EcoT38I GRGCYC 3 cut(s) 111, 180, 213
ErhI CCWWGG 3 cut(s) 736, 1417, 1425
FaeI CATG 8 cut(s) 416, 569, 1083, 1377, 1421, 1648, 1921, 2037
FalI AAGNNNNNCTT 4 cut(s) 710, 742, 1418, 1450
FaqI GGGAC 2 cut(s) 238, 1398
FatI CATG 8 cut(s) 412, 565, 1079, 1373, 1417, 1644, 1917, 2033
FauNDI CATATG 1 cut(s) 1960
FbaI TGATCA 4 cut(s) 804, 1018, 1128, 1647
Fnu4HI GCNGC 8 cut(s) 137, 612, 819, 1866, 2136, 2139, 2298, 2301
FokI GGATG 8 cut(s) 68, 116, 542, 890, 992, 1112, 1472, 1871
FriOI GRGCYC 3 cut(s) 111, 180, 213
Fsp4HI GCNGC 8 cut(s) 137, 612, 819, 1866, 2136, 2139, 2298, 2301
FspBI CTAG 6 cut(s) 737, 815, 1493, 1556, 2013, 2163
GlaI GCGC 1 cut(s) 2284
GluI GCNGC 8 cut(s) 137, 612, 819, 1866, 2136, 2139, 2298, 2301
GsaI CCCAGC 3 cut(s) 825, 1451, 2153
GsuI CTGGAG 1 cut(s) 1371
HaeIII GGCC 9 cut(s) 50, 64, 87, 100, 127, 248, 741, 1568, 2057
HapII CCGG 8 cut(s) 65, 101, 128, 488, 1569, 2091, 2192, 2238
HgaI GACGC 1 cut(s) 2223
HhaI GCGC 1 cut(s) 2285
Hin1II CATG 8 cut(s) 416, 569, 1083, 1377, 1421, 1648, 1921, 2037
Hin6I GCGC 1 cut(s) 2283
HinP1I GCGC 1 cut(s) 2283
HincII GTYRAC 2 cut(s) 459, 2176
HindII GTYRAC 2 cut(s) 459, 2176
HpaII CCGG 8 cut(s) 65, 101, 128, 488, 1569, 2091, 2192, 2238
HphI GGTGA 3 cut(s) 791, 1486, 2252
Hpy166II GTNNAC 5 cut(s) 367, 459, 703, 1882, 2176
Hpy188I TCNGA 6 cut(s) 1018, 1069, 1188, 1936, 2073, 2227
Hpy8I GTNNAC 5 cut(s) 367, 459, 703, 1882, 2176
Hpy99I CGWCG 1 cut(s) 523
HpyAV CCTTC 4 cut(s) 397, 908, 1264, 1855
HpyCH4III ACNGT 6 cut(s) 364, 523, 779, 1002, 1591, 1789
Hsp92II CATG 8 cut(s) 416, 569, 1083, 1377, 1421, 1648, 1921, 2037
HspAI GCGC 1 cut(s) 2283
KpnI GGTACC 1 cut(s) 1590
Ksp22I TGATCA 4 cut(s) 804, 1018, 1128, 1647
LmnI GCTCC 7 cut(s) 70, 133, 886, 1145, 1723, 2146, 2263
Lsp1109I GCAGC 6 cut(s) 830, 1852, 2147, 2150, 2284, 2312
MaeI CTAG 6 cut(s) 737, 815, 1493, 1556, 2013, 2163
MaeIII GTNAC 6 cut(s) 810, 856, 1474, 1783, 1990, 2240
MboII GAAGA 6 cut(s) 160, 718, 724, 802, 1348, 1816
MfeI CAATTG 1 cut(s) 2082
MflI RGATCY 1 cut(s) 825
MhlI GDGCHC 4 cut(s) 111, 180, 213, 2340
MlsI TGGCCA 2 cut(s) 248, 2057
MluNI TGGCCA 2 cut(s) 248, 2057
MlyI GAGTC 6 cut(s) 460, 1294, 1362, 1627, 2216, 2222
MmeI TCCRAC 2 cut(s) 1021, 1839
Mox20I TGGCCA 2 cut(s) 248, 2057
Mph1103I ATGCAT 2 cut(s) 583, 1297
MscI TGGCCA 2 cut(s) 248, 2057
MseI TTAA 8 cut(s) 164, 296, 396, 536, 1482, 1719, 2046, 2362
MslI CAYNNNNRTG 1 cut(s) 372
Msp20I TGGCCA 2 cut(s) 248, 2057
MspA1I CMGCKG 3 cut(s) 448, 611, 821
MspI CCGG 8 cut(s) 65, 101, 128, 488, 1569, 2091, 2192, 2238
MspR9I CCNGG 4 cut(s) 53, 1164, 2004, 2091
MunI CAATTG 1 cut(s) 2082
Mva1269I GAATGC 1 cut(s) 1549
MvaI CCWGG 3 cut(s) 53, 1164, 2004
MvnI CGCG 1 cut(s) 2234
NciI CCSGG 1 cut(s) 2091
NcoI CCATGG 1 cut(s) 1417
NdeI CATATG 1 cut(s) 1960
NheI GCTAGC 1 cut(s) 2012
NlaIII CATG 8 cut(s) 416, 569, 1083, 1377, 1421, 1648, 1921, 2037
NmuCI GTSAC 4 cut(s) 810, 1474, 1990, 2240
NsiI ATGCAT 2 cut(s) 583, 1297
NspI RCATGY 3 cut(s) 569, 1083, 2037
PaeI GCATGC 2 cut(s) 1083, 2037
PagI TCATGA 1 cut(s) 1644
PctI GAATGC 1 cut(s) 1549
PfeI GAWTC 5 cut(s) 221, 793, 1265, 1384, 1971
Pfl23II CGTACG 1 cut(s) 573
PfoI TCCNGGA 1 cut(s) 2002
PkrI GCNGC 8 cut(s) 138, 613, 820, 1867, 2137, 2140, 2299, 2302
PleI GAGTC 6 cut(s) 460, 1294, 1361, 1627, 2216, 2222
PpsI GAGTC 6 cut(s) 460, 1294, 1361, 1627, 2216, 2222
PsiI TTATAA 1 cut(s) 588
Psp6I CCWGG 3 cut(s) 51, 1162, 2002
PspEI GGTNACC 1 cut(s) 1474
PspFI CCCAGC 3 cut(s) 821, 1447, 2149
PspGI CCWGG 3 cut(s) 51, 1162, 2002
PspLI CGTACG 1 cut(s) 573
PspPI GGNCC 6 cut(s) 49, 62, 98, 125, 740, 1421
PstI CTGCAG 1 cut(s) 2302
PstNI CAGNNNCTG 2 cut(s) 1787, 2009
PsuI RGATCY 1 cut(s) 825
PvuII CAGCTG 2 cut(s) 448, 821
RsaI GTAC 6 cut(s) 366, 575, 621, 776, 1588, 1883
RsaNI GTAC 6 cut(s) 365, 574, 620, 775, 1587, 1882
RseI CAYNNNNRTG 1 cut(s) 372
SaqAI TTAA 8 cut(s) 164, 296, 396, 536, 1482, 1719, 2046, 2362
SatI GCNGC 8 cut(s) 137, 612, 819, 1866, 2136, 2139, 2298, 2301
Sau96I GGNCC 6 cut(s) 49, 62, 98, 125, 740, 1421
SchI GAGTC 6 cut(s) 460, 1294, 1362, 1627, 2216, 2222
ScrFI CCNGG 4 cut(s) 53, 1164, 2004, 2091
SduI GDGCHC 4 cut(s) 111, 180, 213, 2340
SfcI CTRYAG 2 cut(s) 970, 2298
SinI GGWCC 1 cut(s) 1421
SmiMI CAYNNNNRTG 1 cut(s) 372
SmlI CTYRAG 3 cut(s) 114, 141, 1965
SmoI CTYRAG 3 cut(s) 114, 141, 1965
SphI GCATGC 2 cut(s) 1083, 2037
SsiI CCGC 3 cut(s) 137, 611, 2232
SspMI CTAG 6 cut(s) 737, 815, 1493, 1556, 2013, 2163
StyD4I CCNGG 4 cut(s) 51, 1162, 2002, 2089
StyI CCWWGG 3 cut(s) 736, 1417, 1425
TaaI ACNGT 6 cut(s) 364, 523, 779, 1002, 1591, 1789
TatI WGTACW 2 cut(s) 619, 1881
TauI GCSGC 2 cut(s) 139, 614
TfiI GAWTC 5 cut(s) 221, 793, 1265, 1384, 1971
Tru1I TTAA 8 cut(s) 164, 296, 396, 536, 1482, 1719, 2046, 2362
Tru9I TTAA 8 cut(s) 164, 296, 396, 536, 1482, 1719, 2046, 2362
TscAI CASTG 3 cut(s) 1213, 1884, 2044
TseFI GTSAC 4 cut(s) 810, 1474, 1990, 2240
TseI GCWGC 6 cut(s) 818, 1865, 2135, 2138, 2297, 2300
Tsp45I GTSAC 4 cut(s) 810, 1474, 1990, 2240
TspDTI ATGAA 6 cut(s) 401, 647, 648, 835, 1816, 2039
TspGWI ACGGA 1 cut(s) 1964
TspRI CASTG 3 cut(s) 1213, 1884, 2044
VpaK11BI GGWCC 1 cut(s) 1421
XagI CCTNNNNNAGG 3 cut(s) 81, 117, 1113
XapI RAATTY 5 cut(s) 842, 1487, 1524, 1679, 1904
XceI RCATGY 3 cut(s) 569, 1083, 2037
XcmI CCANNNNNNNNNTGG 1 cut(s) 892
XmaJI CCTAGG 1 cut(s) 736
XspI CTAG 6 cut(s) 737, 815, 1493, 1556, 2013, 2163
Zsp2I ATGCAT 2 cut(s) 583, 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.