Rh2BG014800

glycerophosphoryl diester phosphodiesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0013180
Physical Location & Seq
Reverse (-)
1100472 .. 1104748
4277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG014800.1

Sequence Viewer

Length: 2340 bp
ATGATGAGATGTTTGCTTCTCATTTCCCTGTTGATCCTTTCAGCATTGGCCCAGGATGTAGGGCCGGAGGAGCCTCCTCCATTAGGCCAGAAAGGAGGGCCGGAGGAGCCGCCTCAAGGGAAGAAATGGCTGACATTAAATGGTAAAGAGCCCCTGATTGTAGCTCGTGGAGGGCTATCGGGGCTCTTTCCAGAATCGAGCAATTATGCTAATAGTATGGCCAAGTCCCTGAGTTTGATAGGCACAGCTCTCTACTGCAATCTACAATTAACGAAAGATAGCGTGGGAATATGCCTGTCAAACATTCTGCTTGATAATACAACAACAATATCTACGGTACACCCTAATGGCGACAACACTTACAATGTTAATGGGAAGGAAGTTCATGGGTGGTTCGCTTTAGATTTCACAGCAGATCAGCTGTCAAAGTTGAGATTGACTCAAAACATCTTTTCCAGACCGGATCAATTTGACGGTACTATGCCTATATCGACGGTTGAGGATGTTTTAAATAGCAAACCAGACCAGTTTTGGTTGCATGTGCCGTACGATGCATTTTATAACGAACACAAAATCAGTCCAGCGGCATTTGTACAAAGGCAAATGAAAGTTGCAGACATCAATTTCCTTTCATCTCCTGAGATTGGTTTCTTGAAGACCATCGGTGGAAAAGTGGACAAATTGAAGACCAAGCTCATCTTCGAGTTCCTAGGCCCCGATGAGATTGAACCCACAACTAAACAAAAGTACGGTGAATTGCTGAAGAATCTTGGAATGATCAAGTCACTAGCAGCTGGGATCCTTGTTCCAAAAGAATTCATATACCCTGTTACCTCAAATAATTATTTGGATGCTCCCACTACTCTGGTGGCAGATGCTCACAAAGAAGGGGTGGAAGTATATGTTAAAGGCTTCGCAAACGATCAAAAAATCCCTTACAACTATAGTATGGATGCAACAGCAGAAATCCAACAGTTCGTAGATAATTCTGATCAGTTTTCTGTTGATGGGGTGCTTACAGATTTCCCACATACGGCAACAGAAGCCATTGCATGCTTTTCGCATAACAAGGATGCCAAGCCTTATAAAGGAAGTCCATTGATCATAAGTAGAAATGGAGCGAGTGGGAACTATCCTGGTTGCACAGACCTTGCTTATCAGAGAGCAGTAGATGATGGTGCTGACATAATCGATTGCTCGGTCCAAATGTCAAGTGATGGAGTTGCCTTCTGCTTAGATTCCATAGACCTCAACTCAGGCACCAATGCATTGACTCAATTTATGACCAAGAGTGAGACTATCCCTGAACTTCAACCTGAAGCTGGAGTCTTCTCGTTCCAGCTCACATGGGAGGAGATTCAGTCCTTGAAACCCCAACTGCAAAGTCCCAACGGACCCAAGGCAGACTTGTATAGAAACCCAGCTAACAAGGATGCAGGTAAACTGGTGACCCTTCATGAATTCCTAGAGTTCGCCAAGAAAAAGGCAACTACTGGAATTTTGATCGACATTGAGAATGCACCATATCTAGCATCAAAGGCCGGTCTGGACATTGTTGGTACCGTAATCTCTGCCTTGAAAAATGCCACACTCGACAAGCAATCGACTCAACAAGTCATGATCAAATCAAATGACACTTCAGTCCTGTCCAAATTCGCTGATGAGAAACCATACAAAAGAGTGTTCACCATTAAGGAGCAAGTAGGTTCTGCACCAAAGCAATCAATTGACGAGATCAAGAAGTTTGCAGATGCAGTAATTGTCAGCAAAAATTCGGTTATTCAGTCCAACTCTTTCTTCATCGCGAGAGAAACTGGCATCATCGAGGAATTGAAGGCTGCAAATCTTTCAGTGTACATCCATTACCTGAAAAACGAATTCGTCAGTCTCTTGTTTGATTATCTCTCAGACCCCATTTACGAAATAGCTACATATGCTCAAGGATTCAAGGTTGATGGAATTGTGACTGATTTCCCAGGAACTGCTAGCAAATATATGAGATGTGCATGCACTGATCTTAACCCTGGGGCCAATGTGCCATATGCGATTTTGCCAATTGAACCCGGTTCTCTCCTCAGCTTGCTACCCCCTGAGAATCTGGAACCAGCAGCAGCTCCCCTCCCAGCTCTCGAAGCTAGTAGCATAGTTGACCCACCACTTCCTCCAGTGGCACCCAAAAAGGAGACCAAGCCCGACTCAGACTCCGCGTCCGGTGACAAGCCTGCTCATGCTCCTGCACCTGCACCGACCCGAAAATCAAGCGCATTGGCAAATGCAGCAAACTGGGGTGTTTCTTTGGTAGCAATAATGGTGCTCAGCTTATTGTCTATGGGAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0016020 GO:0031224 GO:0031225 GO:0044425 GO:0048046
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDPD

Protein Analysis

779

Amino Acids

84.45

Weight (kDa)

5.07

Isoelectric Point (pI)

38.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDPD PF03009 373 - 661 6.2e-26 Glycerophosphoryl diester phosphodiesterase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013180)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G58050 AT5G58170
fragaria_vesca FvH4_1g01240
malus_domestica MD02G1010300.v1.1 MD15G1155300.v1.1
prunus_persica Prupe.7G259800_v2.0.a1 Prupe.7G259800_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0086011
rosa_laevigata RLG00000015734
rosa_multiflora Rmu_ssc0000355.1_g000023
rosa_roxburghii Rroxscaffold_2G00154850
rosa_rugosa Rorug01G0465000 Rorug01G0465100
rosa_samantha Rh2AG014300 Rh2BG014800 Rh2CG015400 Rh2DG016700
rosa_wichuraiana Rw2G001270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 561, 1086
AarI CACCTGC 1 cut(s) 2248
AasI GACNNNNNNGTC 1 cut(s) 1640
Acc36I ACCTGC 2 cut(s) 1427, 2248
Acc65I GGTACC 1 cut(s) 1559
AccB1I GGYRCC 3 cut(s) 1259, 1559, 2170
AccII CGCG 2 cut(s) 1805, 2207
AciI CCGC 3 cut(s) 110, 584, 2205
AclWI GGATC 4 cut(s) 28, 471, 793, 806
AcoI YGGCCR 1 cut(s) 219
AcsI RAATTY 6 cut(s) 815, 1460, 1497, 1652, 1771, 1877
AcuI CTGAAG 3 cut(s) 782, 1338, 1623
AfaI GTAC 7 cut(s) 339, 478, 548, 594, 749, 1561, 1856
AfiI CCNNNNNNNGG 6 cut(s) 83, 116, 644, 1033, 1088, 1322
AgsI TTSAA 9 cut(s) 655, 685, 728, 1313, 1369, 1579, 1834, 1948, 2060
AhdI GACNNNNNGTC 1 cut(s) 2206
AjnI CCWGG 4 cut(s) 51, 1135, 1975, 2023
AjuI GAANNNNNNNTTGG 4 cut(s) 683, 715, 1781, 1813
Alw21I GWGCWC 1 cut(s) 2316
Alw26I GTCTC 3 cut(s) 1289, 1892, 2177
AlwI GGATC 4 cut(s) 28, 471, 793, 806
AlwNI CAGNNNCTG 1 cut(s) 1982
AoxI GGCC 8 cut(s) 48, 62, 85, 98, 219, 712, 1539, 2028
ApeKI GCWGC 5 cut(s) 791, 1838, 2108, 2111, 2276
ApoI RAATTY 6 cut(s) 815, 1460, 1497, 1652, 1771, 1877
Asp718I GGTACC 1 cut(s) 1559
AspA2I CCTAGG 1 cut(s) 709
AspLEI GCGC 1 cut(s) 2264
AspS9I GGNCC 7 cut(s) 49, 62, 98, 713, 1201, 1394, 2028
AsuC2I CCSGG 1 cut(s) 2064
AsuHPI GGTGA 4 cut(s) 764, 1459, 1678, 2225
AsuNHI GCTAGC 1 cut(s) 1985
AvaII GGWCC 2 cut(s) 1201, 1394
AvrII CCTAGG 1 cut(s) 709
BalI TGGCCA 1 cut(s) 221
BamHI GGATCC 1 cut(s) 798
BanI GGYRCC 3 cut(s) 1259, 1559, 2170
BanII GRGCYC 2 cut(s) 153, 186
BauI CACGAG 1 cut(s) 165
BbsI GAAGAC 3 cut(s) 662, 692, 1321
Bbv12I GWGCWC 1 cut(s) 2316
BbvCI CCTCAGC 1 cut(s) 2075
BbvI GCAGC 5 cut(s) 803, 1825, 2120, 2123, 2288
BccI CCATC 5 cut(s) 668, 1001, 1169, 1211, 1949
BceAI ACGGC 2 cut(s) 529, 1050
BcgI CGANNNNNNTGC 2 cut(s) 1041, 1075
BciT130I CCWGG 4 cut(s) 53, 1137, 1977, 2025
BclI TGATCA 4 cut(s) 777, 991, 1101, 1620
BcnI CCSGG 1 cut(s) 2064
BcoDI GTCTC 3 cut(s) 1289, 1892, 2177
BfaI CTAG 6 cut(s) 710, 788, 1466, 1529, 1986, 2136
BfmI CTRYAG 1 cut(s) 943
BfuAI ACCTGC 2 cut(s) 1427, 2248
BisI GCNGC 7 cut(s) 110, 585, 792, 1839, 2109, 2112, 2277
BlnI CCTAGG 1 cut(s) 709
BlpI GCTNAGC 1 cut(s) 2315
BlsI GCNGC 7 cut(s) 111, 586, 793, 1840, 2110, 2113, 2278
Bme1390I CCNGG 5 cut(s) 53, 1137, 1977, 2025, 2064
Bme18I GGWCC 2 cut(s) 1201, 1394
BmeRI GACNNNNNGTC 1 cut(s) 2206
BmgT120I GGNCC 7 cut(s) 49, 62, 98, 713, 1201, 1394, 2028
BmrFI CCNGG 5 cut(s) 53, 1137, 1977, 2025, 2064
BmrI ACTGGG 1 cut(s) 2293
BmsI GCATC 9 cut(s) 541, 841, 865, 943, 1063, 1423, 1541, 1741, 1827
BmtI GCTAGC 1 cut(s) 1989
BmuI ACTGGG 1 cut(s) 2293
BpiI GAAGAC 3 cut(s) 662, 692, 1321
BplI GAGNNNNNCTC 2 cut(s) 424, 456
BpmI CTGGAG 2 cut(s) 1344, 2148
Bpu10I CCTNAGC 1 cut(s) 2075
Bpu1102I GCTNAGC 1 cut(s) 2315
BpuEI CTTGAG 2 cut(s) 99, 1923
BpuMI CCSGG 1 cut(s) 2064
Bsa29I ATCGAT 1 cut(s) 1191
BsaI GGTCTC 1 cut(s) 2177
BsaJI CCNNGG 6 cut(s) 51, 709, 1398, 1975, 2023, 2024
BsaWI WCCGGW 2 cut(s) 460, 2210
BsaXI ACNNNNNCTCC 4 cut(s) 1346, 1376, 2186, 2216
Bsc4I CCNNNNNNNGG 6 cut(s) 83, 116, 644, 1033, 1088, 1322
Bse118I RCCGGY 1 cut(s) 1541
Bse1I ACTGG 6 cut(s) 526, 1449, 1498, 1819, 2165, 2288
Bse3DI GCAATG 1 cut(s) 1047
BseBI CCWGG 4 cut(s) 53, 1137, 1977, 2025
BseCI ATCGAT 1 cut(s) 1191
BseDI CCNNGG 6 cut(s) 51, 709, 1398, 1975, 2023, 2024
BseGI GGATG 7 cut(s) 61, 508, 856, 958, 1078, 1438, 1857
BseLI CCNNNNNNNGG 6 cut(s) 83, 116, 644, 1033, 1088, 1322
BseMI GCAATG 1 cut(s) 1047
BseMII CTCAG 8 cut(s) 221, 630, 1269, 1920, 2082, 2089, 2211, 2329
BseNI ACTGG 6 cut(s) 526, 1449, 1498, 1819, 2165, 2288
BseRI GAGGAG 5 cut(s) 66, 83, 119, 1367, 2063
BseXI GCAGC 5 cut(s) 803, 1825, 2120, 2123, 2288
BseYI CCCAGC 3 cut(s) 794, 1420, 2122
BsgI GTGCAG 3 cut(s) 1695, 2220, 2226
Bsh1236I CGCG 2 cut(s) 1805, 2207
BshFI GGCC 8 cut(s) 50, 64, 87, 100, 221, 714, 1541, 2030
BshNI GGYRCC 3 cut(s) 1259, 1559, 2170
BshVI ATCGAT 1 cut(s) 1191
BsiHKAI GWGCWC 1 cut(s) 2316
BsiSI CCGG 6 cut(s) 65, 101, 461, 1542, 2064, 2211
BsiWI CGTACG 1 cut(s) 546
BslFI GGGAC 2 cut(s) 211, 1371
BslI CCNNNNNNNGG 6 cut(s) 83, 116, 644, 1033, 1088, 1322
BsmAI GTCTC 3 cut(s) 1289, 1892, 2177
BsmFI GGGAC 2 cut(s) 211, 1371
BsmI GAATGC 1 cut(s) 1522
BsnI GGCC 8 cut(s) 50, 64, 87, 100, 221, 714, 1541, 2030
Bso31I GGTCTC 1 cut(s) 2177
Bsp1286I GDGCHC 3 cut(s) 153, 186, 2316
Bsp1407I TGTACA 2 cut(s) 592, 1854
Bsp1720I GCTNAGC 1 cut(s) 2315
Bsp68I TCGCGA 1 cut(s) 1805
BspACI CCGC 3 cut(s) 110, 584, 2205
BspANI GGCC 8 cut(s) 50, 64, 87, 100, 221, 714, 1541, 2030
BspCNI CTCAG 8 cut(s) 222, 631, 1268, 1919, 2083, 2088, 2210, 2328
BspDI ATCGAT 1 cut(s) 1191
BspFNI CGCG 2 cut(s) 1805, 2207
BspHI TCATGA 2 cut(s) 1456, 1617
BspMI ACCTGC 2 cut(s) 1427, 2248
BspOI GCTAGC 1 cut(s) 1989
BspPI GGATC 4 cut(s) 28, 471, 793, 806
BspT107I GGYRCC 3 cut(s) 1259, 1559, 2170
BspTNI GGTCTC 1 cut(s) 2177
BsrDI GCAATG 1 cut(s) 1047
BsrFI RCCGGY 1 cut(s) 1541
BsrGI TGTACA 2 cut(s) 592, 1854
BsrI ACTGG 6 cut(s) 526, 1449, 1498, 1819, 2165, 2288
BssAI RCCGGY 1 cut(s) 1541
BssECI CCNNGG 6 cut(s) 51, 709, 1398, 1975, 2023, 2024
BssSI CACGAG 1 cut(s) 165
BssT1I CCWWGG 2 cut(s) 709, 1398
Bst2BI CACGAG 1 cut(s) 165
Bst2UI CCWGG 4 cut(s) 53, 1137, 1977, 2025
Bst4CI ACNGT 6 cut(s) 337, 476, 496, 752, 975, 1564
BstAUI TGTACA 2 cut(s) 592, 1854
BstC8I GCNNGC 5 cut(s) 1054, 1987, 2008, 2081, 2223
BstDEI CTNAG 9 cut(s) 230, 639, 1234, 1255, 1906, 2075, 2091, 2197, 2315
BstEII GGTNACC 1 cut(s) 1447
BstENI CCTNNNNNAGG 2 cut(s) 81, 1086
BstF5I GGATG 7 cut(s) 61, 508, 856, 958, 1078, 1438, 1857
BstFNI CGCG 2 cut(s) 1805, 2207
BstHHI GCGC 1 cut(s) 2264
BstMAI GTCTC 3 cut(s) 1289, 1892, 2177
BstMWI GCNNNNNNNGC 8 cut(s) 70, 106, 181, 1043, 1538, 1934, 2132, 2276
BstNI CCWGG 4 cut(s) 53, 1137, 1977, 2025
BstNSI RCATGY 3 cut(s) 542, 1056, 2010
BstPI GGTNACC 1 cut(s) 1447
BstSCI CCNGG 5 cut(s) 51, 1135, 1975, 2023, 2062
BstSFI CTRYAG 1 cut(s) 943
BstUI CGCG 2 cut(s) 1805, 2207
BstV1I GCAGC 5 cut(s) 803, 1825, 2120, 2123, 2288
BstV2I GAAGAC 3 cut(s) 662, 692, 1321
BstX2I RGATCY 1 cut(s) 798
BstXI CCANNNNNNTGG 1 cut(s) 865
BstYI RGATCY 1 cut(s) 798
Bsu15I ATCGAT 1 cut(s) 1191
BsuRI GGCC 8 cut(s) 50, 64, 87, 100, 221, 714, 1541, 2030
BsuTUI ATCGAT 1 cut(s) 1191
BtgZI GCGATG 1 cut(s) 1786
BtsCI GGATG 7 cut(s) 61, 508, 856, 958, 1078, 1438, 1857
BtsIMutI CAGTG 3 cut(s) 1857, 2010, 2172
BtuMI TCGCGA 1 cut(s) 1805
BveI ACCTGC 2 cut(s) 1427, 2248
Cac8I GCNNGC 5 cut(s) 1054, 1987, 2008, 2081, 2223
CaiI CAGNNNCTG 1 cut(s) 1982
CciI TCATGA 2 cut(s) 1456, 1617
CfoI GCGC 1 cut(s) 2264
Cfr10I RCCGGY 1 cut(s) 1541
Cfr13I GGNCC 7 cut(s) 49, 62, 98, 713, 1201, 1394, 2028
ClaI ATCGAT 1 cut(s) 1191
CseI GACGC 1 cut(s) 2196
Csp6I GTAC 7 cut(s) 338, 477, 547, 593, 748, 1560, 1855
CviAII CATG 8 cut(s) 386, 539, 1053, 1347, 1457, 1618, 2007, 2228
CviQI GTAC 7 cut(s) 338, 477, 547, 593, 748, 1560, 1855
DdeI CTNAG 9 cut(s) 230, 639, 1234, 1255, 1906, 2075, 2091, 2197, 2315
DraI TTTAAA 1 cut(s) 510
DrdI GACNNNNNNGTC 1 cut(s) 1640
DriI GACNNNNNGTC 1 cut(s) 2206
DseDI GACNNNNNNGTC 1 cut(s) 1640
EaeI YGGCCR 1 cut(s) 219
Eam1105I GACNNNNNGTC 1 cut(s) 2206
Eco130I CCWWGG 2 cut(s) 709, 1398
Eco24I GRGCYC 2 cut(s) 153, 186
Eco31I GGTCTC 1 cut(s) 2177
Eco47I GGWCC 2 cut(s) 1201, 1394
Eco57I CTGAAG 3 cut(s) 782, 1338, 1623
Eco91I GGTNACC 1 cut(s) 1447
EcoNI CCTNNNNNAGG 2 cut(s) 81, 1086
EcoO109I RGGNCCY 1 cut(s) 713
EcoO65I GGTNACC 1 cut(s) 1447
EcoRI GAATTC 3 cut(s) 815, 1460, 1877
EcoRII CCWGG 4 cut(s) 51, 1135, 1975, 2023
EcoT14I CCWWGG 2 cut(s) 709, 1398
EcoT22I ATGCAT 2 cut(s) 556, 1270
EcoT38I GRGCYC 2 cut(s) 153, 186
ErhI CCWWGG 2 cut(s) 709, 1398
FaeI CATG 8 cut(s) 389, 542, 1056, 1350, 1460, 1621, 2010, 2231
FalI AAGNNNNNCTT 4 cut(s) 683, 715, 1391, 1423
FaqI GGGAC 2 cut(s) 211, 1371
FatI CATG 8 cut(s) 385, 538, 1052, 1346, 1456, 1617, 2006, 2227
FauNDI CATATG 2 cut(s) 1933, 2041
FbaI TGATCA 4 cut(s) 777, 991, 1101, 1620
Fnu4HI GCNGC 7 cut(s) 110, 585, 792, 1839, 2109, 2112, 2277
FokI GGATG 7 cut(s) 68, 515, 863, 965, 1085, 1445, 1844
FriOI GRGCYC 2 cut(s) 153, 186
Fsp4HI GCNGC 7 cut(s) 110, 585, 792, 1839, 2109, 2112, 2277
FspBI CTAG 6 cut(s) 710, 788, 1466, 1529, 1986, 2136
GlaI GCGC 1 cut(s) 2263
GluI GCNGC 7 cut(s) 110, 585, 792, 1839, 2109, 2112, 2277
GsaI CCCAGC 3 cut(s) 798, 1424, 2126
GsuI CTGGAG 2 cut(s) 1344, 2148
HaeIII GGCC 8 cut(s) 50, 64, 87, 100, 221, 714, 1541, 2030
HapII CCGG 6 cut(s) 65, 101, 461, 1542, 2064, 2211
HgaI GACGC 1 cut(s) 2196
HhaI GCGC 1 cut(s) 2264
Hin1II CATG 8 cut(s) 389, 542, 1056, 1350, 1460, 1621, 2010, 2231
Hin6I GCGC 1 cut(s) 2262
HinP1I GCGC 1 cut(s) 2262
HincII GTYRAC 1 cut(s) 2149
HindII GTYRAC 1 cut(s) 2149
HpaII CCGG 6 cut(s) 65, 101, 461, 1542, 2064, 2211
HphI GGTGA 4 cut(s) 764, 1459, 1678, 2225
Hpy166II GTNNAC 6 cut(s) 340, 676, 1442, 1686, 1855, 2149
Hpy188I TCNGA 4 cut(s) 991, 1161, 1909, 2200
Hpy8I GTNNAC 6 cut(s) 340, 676, 1442, 1686, 1855, 2149
Hpy99I CGWCG 1 cut(s) 496
HpyAV CCTTC 5 cut(s) 370, 881, 1237, 1463, 1828
HpyCH4III ACNGT 6 cut(s) 337, 476, 496, 752, 975, 1564
HpyF10VI GCNNNNNNNGC 8 cut(s) 70, 106, 181, 1043, 1538, 1934, 2132, 2276
HpyF3I CTNAG 9 cut(s) 230, 639, 1234, 1255, 1906, 2075, 2091, 2197, 2315
Hsp92II CATG 8 cut(s) 389, 542, 1056, 1350, 1460, 1621, 2010, 2231
HspAI GCGC 1 cut(s) 2262
KpnI GGTACC 1 cut(s) 1563
Ksp22I TGATCA 4 cut(s) 777, 991, 1101, 1620
LmnI GCTCC 7 cut(s) 70, 106, 859, 1118, 1696, 2119, 2236
Lsp1109I GCAGC 5 cut(s) 803, 1825, 2120, 2123, 2288
LweI GCATC 9 cut(s) 541, 841, 865, 943, 1063, 1423, 1541, 1741, 1827
MaeI CTAG 6 cut(s) 710, 788, 1466, 1529, 1986, 2136
MaeIII GTNAC 5 cut(s) 783, 829, 1447, 1963, 2213
MboII GAAGA 7 cut(s) 133, 667, 691, 697, 775, 1321, 1789
MfeI CAATTG 2 cut(s) 1725, 2055
MflI RGATCY 1 cut(s) 798
MhlI GDGCHC 3 cut(s) 153, 186, 2316
MlsI TGGCCA 1 cut(s) 221
MluNI TGGCCA 1 cut(s) 221
MlyI GAGTC 6 cut(s) 433, 1267, 1335, 1600, 2189, 2195
MmeI TCCRAC 2 cut(s) 994, 1812
Mox20I TGGCCA 1 cut(s) 221
Mph1103I ATGCAT 2 cut(s) 556, 1270
MscI TGGCCA 1 cut(s) 221
MseI TTAA 8 cut(s) 137, 269, 369, 509, 906, 1692, 2019, 2338
MslI CAYNNNNRTG 1 cut(s) 345
Msp20I TGGCCA 1 cut(s) 221
MspA1I CMGCKG 3 cut(s) 421, 584, 794
MspI CCGG 6 cut(s) 65, 101, 461, 1542, 2064, 2211
MspR9I CCNGG 5 cut(s) 53, 1137, 1977, 2025, 2064
MunI CAATTG 2 cut(s) 1725, 2055
Mva1269I GAATGC 1 cut(s) 1522
MvaI CCWGG 4 cut(s) 53, 1137, 1977, 2025
MvnI CGCG 2 cut(s) 1805, 2207
MwoI GCNNNNNNNGC 8 cut(s) 70, 106, 181, 1043, 1538, 1934, 2132, 2276
NciI CCSGG 1 cut(s) 2064
NdeI CATATG 2 cut(s) 1933, 2041
NheI GCTAGC 1 cut(s) 1985
NlaIII CATG 8 cut(s) 389, 542, 1056, 1350, 1460, 1621, 2010, 2231
NmuCI GTSAC 4 cut(s) 783, 1447, 1963, 2213
NruI TCGCGA 1 cut(s) 1805
NsiI ATGCAT 2 cut(s) 556, 1270
NspI RCATGY 3 cut(s) 542, 1056, 2010
PaeI GCATGC 2 cut(s) 1056, 2010
PagI TCATGA 2 cut(s) 1456, 1617
PaqCI CACCTGC 1 cut(s) 2248
PasI CCCWGGG 1 cut(s) 2024
PctI GAATGC 1 cut(s) 1522
PfeI GAWTC 6 cut(s) 194, 766, 1238, 1357, 1944, 2095
Pfl23II CGTACG 1 cut(s) 546
PkrI GCNGC 7 cut(s) 111, 586, 793, 1840, 2110, 2113, 2278
PleI GAGTC 6 cut(s) 433, 1267, 1334, 1600, 2189, 2195
PpsI GAGTC 6 cut(s) 433, 1267, 1334, 1600, 2189, 2195
PsiI TTATAA 2 cut(s) 561, 1086
Psp6I CCWGG 4 cut(s) 51, 1135, 1975, 2023
PspEI GGTNACC 1 cut(s) 1447
PspFI CCCAGC 3 cut(s) 794, 1420, 2122
PspGI CCWGG 4 cut(s) 51, 1135, 1975, 2023
PspLI CGTACG 1 cut(s) 546
PspPI GGNCC 7 cut(s) 49, 62, 98, 713, 1201, 1394, 2028
PstNI CAGNNNCTG 1 cut(s) 1982
PsuI RGATCY 1 cut(s) 798
PvuII CAGCTG 2 cut(s) 421, 794
RruI TCGCGA 1 cut(s) 1805
RsaI GTAC 7 cut(s) 339, 478, 548, 594, 749, 1561, 1856
RsaNI GTAC 7 cut(s) 338, 477, 547, 593, 748, 1560, 1855
RseI CAYNNNNRTG 1 cut(s) 345
SaqAI TTAA 8 cut(s) 137, 269, 369, 509, 906, 1692, 2019, 2338
SatI GCNGC 7 cut(s) 110, 585, 792, 1839, 2109, 2112, 2277
Sau96I GGNCC 7 cut(s) 49, 62, 98, 713, 1201, 1394, 2028
SchI GAGTC 6 cut(s) 433, 1267, 1335, 1600, 2189, 2195
ScrFI CCNGG 5 cut(s) 53, 1137, 1977, 2025, 2064
SduI GDGCHC 3 cut(s) 153, 186, 2316
SfaNI GCATC 9 cut(s) 541, 841, 865, 943, 1063, 1423, 1541, 1741, 1827
SfcI CTRYAG 1 cut(s) 943
SinI GGWCC 2 cut(s) 1201, 1394
SmiMI CAYNNNNRTG 1 cut(s) 345
SmlI CTYRAG 2 cut(s) 114, 1938
SmoI CTYRAG 2 cut(s) 114, 1938
SphI GCATGC 2 cut(s) 1056, 2010
SsiI CCGC 3 cut(s) 110, 584, 2205
SspMI CTAG 6 cut(s) 710, 788, 1466, 1529, 1986, 2136
StyD4I CCNGG 5 cut(s) 51, 1135, 1975, 2023, 2062
StyI CCWWGG 2 cut(s) 709, 1398
TaaI ACNGT 6 cut(s) 337, 476, 496, 752, 975, 1564
TaqI TCGA 9 cut(s) 197, 491, 702, 1191, 1506, 1593, 1604, 1824, 2130
TaqII GACCGA 1 cut(s) 1189
TatI WGTACW 2 cut(s) 592, 1854
TauI GCSGC 2 cut(s) 112, 587
TfiI GAWTC 6 cut(s) 194, 766, 1238, 1357, 1944, 2095
Tru1I TTAA 8 cut(s) 137, 269, 369, 509, 906, 1692, 2019, 2338
Tru9I TTAA 8 cut(s) 137, 269, 369, 509, 906, 1692, 2019, 2338
TscAI CASTG 3 cut(s) 1857, 2017, 2172
TseFI GTSAC 4 cut(s) 783, 1447, 1963, 2213
TseI GCWGC 5 cut(s) 791, 1838, 2108, 2111, 2276
Tsp45I GTSAC 4 cut(s) 783, 1447, 1963, 2213
TspDTI ATGAA 7 cut(s) 374, 620, 621, 808, 1445, 1473, 1789
TspGWI ACGGA 1 cut(s) 1407
TspRI CASTG 3 cut(s) 1857, 2017, 2172
VpaK11BI GGWCC 2 cut(s) 1201, 1394
XagI CCTNNNNNAGG 2 cut(s) 81, 1086
XapI RAATTY 6 cut(s) 815, 1460, 1497, 1652, 1771, 1877
XceI RCATGY 3 cut(s) 542, 1056, 2010
XcmI CCANNNNNNNNNTGG 2 cut(s) 528, 865
XmaJI CCTAGG 1 cut(s) 709
XspI CTAG 6 cut(s) 710, 788, 1466, 1529, 1986, 2136
Zsp2I ATGCAT 2 cut(s) 556, 1270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.