Rh2DG016700

glycerophosphoryl diester phosphodiesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0013180
Physical Location & Seq
Reverse (-)
959502 .. 963706
4205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG016700.1

Sequence Viewer

Length: 2052 bp
ATGTTAGAATCCTCCGGAAAATCAGGAGAAATGATGAGATGTTTGCTTCTCATTTCCCTGTTGATCCATTCAGCATTGGCCCAGGATGTAGGGCCGGAGGAGCCTCCTCCATTAGGCCAGAAAGGAGGGCCAGATGAGCCGCCTCAAGGGAAGAAATGGCTGACATTAAATGGTAGAGAGCCCCTGATTGTAGCTCGTGGAGGGCTATCGGGGCTCTTTCCAGAATCGAGCAATTATGCTAATAGTATGGCCAAGTCCCTGAGTTTGATAGGCACAGCTCTCTACTGCAATCTACAATTAACGAAAGATAGCGTGGGAATATGCCTGTCAAACATTCTGCTTGATAATACAACAACAATATCTACGGTACACCCTAATGGCGACAAAACTTACAATGTTAATGGGAAGGAAGTTCATGGGTGGTTCGCTTTAGATTTCACAGCAGATCAGCTGTCAAAGTTGACATTGACTCAAAACATCTTTTCCAGACCGGATCAATTTGACGATGCTTTGCCTATATCGACAGTTGAGGATGTTTTACATAGCAAACCTGACCAGTTTTGGTTGCATGTGCCGTACGATGCATTTTATAACGAACACAAAATCAGTCCAGCGGCATTTGTACAAAGGCAAATGAAAGTTGCAGACATCAATTTCCTTTCATCTCCTGAGATTGGTTTCTTGAAAACTATCGGTGGAAAAGTGGACAAATTGAAGACCAAGCTCATCTTCGAGTTCCTAGGCCCCGATGAGATTGAACCCACAACTAAACAAAAGTACGGTGAATTGCTGAAGAATCTTGGAATGATCAAGTCACTAGCAGCTGGGATCCTTGTTCCAAAAGAATTCATATACCCTATTACCCCAAATAATTATTTGGATGCTCCCACTACTCTGGTGGCAGATGCTCACAAAGAAGGGGTGGAAGTATATGCTAAAGGCTTTGCAAACGATCAAAATATCCCTTACAACTATAGTATGGATGCAACAGCAGAAATCCAACAGTTCGTAGATAATTCTGATCAATTTTCTGTTGATGGGGTGCTTACAGATTTCCCACCTACGGCATCAGAAGCCATTGCATGCTTTTCGCATAACAAGGATGCCAAGCCTTACAAGGGAAGTCCACTGATCATAAGTAGAAATGGAGCGAGTGGGAACTATCCTGGTTGCACAGACCTTGCTTATCAGAGAGCAGTAGATGATGGCGCTGACATAATCGATTGCTCAGTCCAAATGTCAAGTGATGGAGTTGCCTTCTGCTTAGATTCCATAGACCTCAACTCAGGCACCAATGCATTGATTCAATTTATGACCAAGAGTGAGACTATCCCTGAACTTCAACCTGAAGCAGGAGTCTTCTCGTTCCAGCTCACATGGGAGGAGATTCAGTCCTTGAAACCCCAACTGCAAAGTCCCCACGGAGCCAAGGGAGACTTGTATAGAAACCCAGCTAACAAGGATGCAGGCAAACTGGTGACCCTTAATGAATTCCTAGAGTTCGCCAAGAAAAAGGCAACTACTGGAATTTTGATCGACATTGAGAATGCGCCATACCTAGCATCAAAGGCCGGTCTGGACATTGTTGGTACCGTAATCTCTGCCTTGAAAAATGCCTCACTCGACAAGCAATCGACTCAACAAGTCATGATCAAATCAAATGACACTTCAGTCCTGTCCAAATTCGCTGATGAGAAAACATACAAAAGAGTGTTCAGCATTAAGGAGCAAGTAGGTTCTGCACCAAAGCAATCGATTGACGAGATCAAGAAGTTTGCAGACGCAGTAACTGTCAGCAAAAATTCGGTTATTCAGTCCAACTCTTTCTTCATCTCGGGAGAAACTGGCATCATCAAGGAATTGAAGGCTGCAAATCTTTCAGTGTACATCCATTACCTGAAAAACGAATTCCTCAGTCTCATGTTTGATTATCTCTCAGACCCCATTACCGAAATAGCTACATATGCTCAAGGATTCCATGTTGATGGAATTGTGACTGATTTCCCAGGAACTGCTAGCAAATATATGAGTAAGTCTTGCGGCTCAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0016020 GO:0031224 GO:0031225 GO:0044425 GO:0048046
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GDPD

Protein Analysis

683

Amino Acids

74.49

Weight (kDa)

5.1

Isoelectric Point (pI)

35.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDPD PF03009 383 - 671 6.5e-25 Glycerophosphoryl diester phosphodiesterase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013180)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G58050 AT5G58170
fragaria_vesca FvH4_1g01240
malus_domestica MD02G1010300.v1.1 MD15G1155300.v1.1
prunus_persica Prupe.7G259800_v2.0.a1 Prupe.7G259800_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0086011
rosa_laevigata RLG00000015734
rosa_multiflora Rmu_ssc0000355.1_g000023
rosa_roxburghii Rroxscaffold_2G00154850
rosa_rugosa Rorug01G0465000 Rorug01G0465100
rosa_samantha Rh2AG014300 Rh2BG014800 Rh2CG015400 Rh2DG016700
rosa_wichuraiana Rw2G001270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 591
AasI GACNNNNNNGTC 1 cut(s) 1670
Acc65I GGTACC 1 cut(s) 1589
AccB1I GGYRCC 2 cut(s) 1289, 1589
AccIII TCCGGA 1 cut(s) 14
AciI CCGC 3 cut(s) 140, 614, 2040
AclWI GGATC 4 cut(s) 58, 501, 823, 836
AcoI YGGCCR 1 cut(s) 249
AcsI RAATTY 6 cut(s) 845, 1490, 1527, 1682, 1801, 1907
AcuI CTGAAG 3 cut(s) 812, 1368, 1653
AfaI GTAC 6 cut(s) 369, 578, 624, 779, 1591, 1886
AfiI CCNNNNNNNGG 6 cut(s) 113, 146, 674, 1063, 1118, 1352
AgsI TTSAA 8 cut(s) 685, 715, 758, 1307, 1343, 1399, 1609, 1864
AjnI CCWGG 3 cut(s) 81, 1165, 2005
AjuI GAANNNNNNNTTGG 4 cut(s) 713, 745, 1811, 1843
AluBI AGCT 9 cut(s) 194, 278, 451, 724, 824, 1372, 1454, 1958, 2049
AluI AGCT 9 cut(s) 194, 278, 451, 724, 824, 1372, 1454, 1958, 2049
Alw26I GTCTC 3 cut(s) 1319, 1428, 1922
AlwI GGATC 4 cut(s) 58, 501, 823, 836
AlwNI CAGNNNCTG 2 cut(s) 1790, 2012
Ama87I CYCGRG 1 cut(s) 1834
Aor13HI TCCGGA 1 cut(s) 14
AoxI GGCC 7 cut(s) 78, 92, 115, 128, 249, 742, 1569
ApeKI GCWGC 2 cut(s) 821, 1868
ApoI RAATTY 6 cut(s) 845, 1490, 1527, 1682, 1801, 1907
Asp718I GGTACC 1 cut(s) 1589
AspA2I CCTAGG 1 cut(s) 739
AspLEI GCGC 2 cut(s) 1211, 1552
AspS9I GGNCC 4 cut(s) 79, 92, 128, 743
AsuHPI GGTGA 2 cut(s) 794, 1489
AsuNHI GCTAGC 1 cut(s) 2015
AvaI CYCGRG 1 cut(s) 1834
AvrII CCTAGG 1 cut(s) 739
BalI TGGCCA 1 cut(s) 251
BamHI GGATCC 1 cut(s) 828
BanI GGYRCC 2 cut(s) 1289, 1589
BanII GRGCYC 2 cut(s) 183, 216
BauI CACGAG 1 cut(s) 195
BbsI GAAGAC 2 cut(s) 722, 1351
BbvI GCAGC 2 cut(s) 833, 1855
BccI CCATC 4 cut(s) 1031, 1199, 1241, 1979
BceAI ACGGC 2 cut(s) 559, 1080
BcgI CGANNNNNNTGC 2 cut(s) 1071, 1105
BciT130I CCWGG 3 cut(s) 83, 1167, 2007
BclI TGATCA 4 cut(s) 807, 1021, 1131, 1650
BcoDI GTCTC 3 cut(s) 1319, 1428, 1922
BfaI CTAG 5 cut(s) 740, 818, 1496, 1559, 2016
BfmI CTRYAG 1 cut(s) 973
BfoI RGCGCY 1 cut(s) 1212
BisI GCNGC 5 cut(s) 140, 615, 822, 1869, 2041
BlnI CCTAGG 1 cut(s) 739
BlsI GCNGC 5 cut(s) 141, 616, 823, 1870, 2042
Bme1390I CCNGG 3 cut(s) 83, 1167, 2007
BmeT110I CYCGRG 1 cut(s) 1834
BmgT120I GGNCC 4 cut(s) 79, 92, 128, 743
BmiI GGNNCC 6 cut(s) 102, 745, 830, 1291, 1426, 1591
BmrFI CCNGG 3 cut(s) 83, 1167, 2007
BmtI GCTAGC 1 cut(s) 2019
BpiI GAAGAC 2 cut(s) 722, 1351
BpuEI CTTGAG 3 cut(s) 129, 1953, 2029
Bsa29I ATCGAT 2 cut(s) 1221, 1754
BsaJI CCNNGG 5 cut(s) 81, 739, 1420, 1428, 2005
BsaWI WCCGGW 2 cut(s) 14, 490
BsaXI ACNNNNNCTCC 2 cut(s) 1376, 1406
Bsc4I CCNNNNNNNGG 6 cut(s) 113, 146, 674, 1063, 1118, 1352
Bse118I RCCGGY 1 cut(s) 1571
Bse1I ACTGG 4 cut(s) 556, 1479, 1528, 1849
Bse3DI GCAATG 1 cut(s) 1077
BseAI TCCGGA 1 cut(s) 14
BseBI CCWGG 3 cut(s) 83, 1167, 2007
BseCI ATCGAT 2 cut(s) 1221, 1754
BseDI CCNNGG 5 cut(s) 81, 739, 1420, 1428, 2005
BseGI GGATG 7 cut(s) 91, 538, 886, 988, 1108, 1468, 1887
BseLI CCNNNNNNNGG 6 cut(s) 113, 146, 674, 1063, 1118, 1352
BseMI GCAATG 1 cut(s) 1077
BseMII CTCAG 6 cut(s) 251, 660, 1242, 1299, 1927, 1950
BseNI ACTGG 4 cut(s) 556, 1479, 1528, 1849
BseRI GAGGAG 3 cut(s) 96, 113, 1397
BseXI GCAGC 2 cut(s) 833, 1855
BseYI CCCAGC 2 cut(s) 824, 1450
BsgI GTGCAG 1 cut(s) 1725
BshFI GGCC 7 cut(s) 80, 94, 117, 130, 251, 744, 1571
BshNI GGYRCC 2 cut(s) 1289, 1589
BshVI ATCGAT 2 cut(s) 1221, 1754
BsiHKCI CYCGRG 1 cut(s) 1834
BsiSI CCGG 4 cut(s) 15, 95, 491, 1572
BsiWI CGTACG 1 cut(s) 576
BslFI GGGAC 2 cut(s) 241, 1401
BslI CCNNNNNNNGG 6 cut(s) 113, 146, 674, 1063, 1118, 1352
BsmAI GTCTC 3 cut(s) 1319, 1428, 1922
BsmFI GGGAC 2 cut(s) 241, 1401
BsmI GAATGC 1 cut(s) 1552
BsnI GGCC 7 cut(s) 80, 94, 117, 130, 251, 744, 1571
BsoBI CYCGRG 1 cut(s) 1834
Bsp1286I GDGCHC 2 cut(s) 183, 216
Bsp13I TCCGGA 1 cut(s) 14
Bsp1407I TGTACA 2 cut(s) 622, 1884
BspACI CCGC 3 cut(s) 140, 614, 2040
BspANI GGCC 7 cut(s) 80, 94, 117, 130, 251, 744, 1571
BspCNI CTCAG 6 cut(s) 252, 661, 1241, 1298, 1926, 1949
BspDI ATCGAT 2 cut(s) 1221, 1754
BspEI TCCGGA 1 cut(s) 14
BspHI TCATGA 1 cut(s) 1647
BspLI GGNNCC 6 cut(s) 102, 745, 830, 1291, 1426, 1591
BspOI GCTAGC 1 cut(s) 2019
BspPI GGATC 4 cut(s) 58, 501, 823, 836
BspT107I GGYRCC 2 cut(s) 1289, 1589
BsrDI GCAATG 1 cut(s) 1077
BsrFI RCCGGY 1 cut(s) 1571
BsrGI TGTACA 2 cut(s) 622, 1884
BsrI ACTGG 4 cut(s) 556, 1479, 1528, 1849
BssAI RCCGGY 1 cut(s) 1571
BssECI CCNNGG 5 cut(s) 81, 739, 1420, 1428, 2005
BssSI CACGAG 1 cut(s) 195
BssT1I CCWWGG 2 cut(s) 739, 1428
Bst2BI CACGAG 1 cut(s) 195
Bst2UI CCWGG 3 cut(s) 83, 1167, 2007
Bst4CI ACNGT 6 cut(s) 367, 526, 782, 1005, 1594, 1792
BstAUI TGTACA 2 cut(s) 622, 1884
BstC8I GCNNGC 3 cut(s) 1084, 1468, 2017
BstDEI CTNAG 7 cut(s) 260, 669, 1228, 1264, 1285, 1913, 1936
BstDSI CCRYGG 1 cut(s) 1420
BstEII GGTNACC 1 cut(s) 1477
BstENI CCTNNNNNAGG 2 cut(s) 111, 1350
BstF5I GGATG 7 cut(s) 91, 538, 886, 988, 1108, 1468, 1887
BstH2I RGCGCY 1 cut(s) 1212
BstHHI GCGC 2 cut(s) 1211, 1552
BstMAI GTCTC 3 cut(s) 1319, 1428, 1922
BstMWI GCNNNNNNNGC 7 cut(s) 100, 136, 211, 1073, 1568, 1964, 2046
BstNI CCWGG 3 cut(s) 83, 1167, 2007
BstNSI RCATGY 2 cut(s) 572, 1086
BstPI GGTNACC 1 cut(s) 1477
BstSCI CCNGG 3 cut(s) 81, 1165, 2005
BstSFI CTRYAG 1 cut(s) 973
BstV1I GCAGC 2 cut(s) 833, 1855
BstV2I GAAGAC 2 cut(s) 722, 1351
BstX2I RGATCY 1 cut(s) 828
BstXI CCANNNNNNTGG 2 cut(s) 895, 1985
BstYI RGATCY 1 cut(s) 828
Bsu15I ATCGAT 2 cut(s) 1221, 1754
BsuRI GGCC 7 cut(s) 80, 94, 117, 130, 251, 744, 1571
BsuTUI ATCGAT 2 cut(s) 1221, 1754
BtgI CCRYGG 1 cut(s) 1420
BtsCI GGATG 7 cut(s) 91, 538, 886, 988, 1108, 1468, 1887
BtsIMutI CAGTG 2 cut(s) 1127, 1887
Cac8I GCNNGC 3 cut(s) 1084, 1468, 2017
CaiI CAGNNNCTG 2 cut(s) 1790, 2012
CciI TCATGA 1 cut(s) 1647
CfoI GCGC 2 cut(s) 1211, 1552
Cfr10I RCCGGY 1 cut(s) 1571
Cfr13I GGNCC 4 cut(s) 79, 92, 128, 743
ClaI ATCGAT 2 cut(s) 1221, 1754
CseI GACGC 1 cut(s) 1790
Csp6I GTAC 6 cut(s) 368, 577, 623, 778, 1590, 1885
CviAII CATG 7 cut(s) 416, 569, 1083, 1377, 1648, 1921, 1979
CviQI GTAC 6 cut(s) 368, 577, 623, 778, 1590, 1885
DdeI CTNAG 7 cut(s) 260, 669, 1228, 1264, 1285, 1913, 1936
DrdI GACNNNNNNGTC 1 cut(s) 1670
DseDI GACNNNNNNGTC 1 cut(s) 1670
EaeI YGGCCR 1 cut(s) 249
Eco130I CCWWGG 2 cut(s) 739, 1428
Eco24I GRGCYC 2 cut(s) 183, 216
Eco57I CTGAAG 3 cut(s) 812, 1368, 1653
Eco88I CYCGRG 1 cut(s) 1834
Eco91I GGTNACC 1 cut(s) 1477
EcoNI CCTNNNNNAGG 2 cut(s) 111, 1350
EcoO109I RGGNCCY 1 cut(s) 743
EcoO65I GGTNACC 1 cut(s) 1477
EcoRI GAATTC 3 cut(s) 845, 1490, 1907
EcoRII CCWGG 3 cut(s) 81, 1165, 2005
EcoT14I CCWWGG 2 cut(s) 739, 1428
EcoT22I ATGCAT 2 cut(s) 586, 1300
EcoT38I GRGCYC 2 cut(s) 183, 216
ErhI CCWWGG 2 cut(s) 739, 1428
FaeI CATG 7 cut(s) 419, 572, 1086, 1380, 1651, 1924, 1982
FalI AAGNNNNNCTT 4 cut(s) 713, 745, 1421, 1453
FaqI GGGAC 2 cut(s) 241, 1401
FatI CATG 7 cut(s) 415, 568, 1082, 1376, 1647, 1920, 1978
FauNDI CATATG 1 cut(s) 1963
FbaI TGATCA 4 cut(s) 807, 1021, 1131, 1650
Fnu4HI GCNGC 5 cut(s) 140, 615, 822, 1869, 2041
FokI GGATG 7 cut(s) 98, 545, 893, 995, 1115, 1475, 1874
FriOI GRGCYC 2 cut(s) 183, 216
Fsp4HI GCNGC 5 cut(s) 140, 615, 822, 1869, 2041
FspBI CTAG 5 cut(s) 740, 818, 1496, 1559, 2016
GlaI GCGC 2 cut(s) 1210, 1551
GluI GCNGC 5 cut(s) 140, 615, 822, 1869, 2041
GsaI CCCAGC 2 cut(s) 828, 1454
HaeII RGCGCY 1 cut(s) 1212
HaeIII GGCC 7 cut(s) 80, 94, 117, 130, 251, 744, 1571
HapII CCGG 4 cut(s) 15, 95, 491, 1572
HgaI GACGC 1 cut(s) 1790
HhaI GCGC 2 cut(s) 1211, 1552
Hin1II CATG 7 cut(s) 419, 572, 1086, 1380, 1651, 1924, 1982
Hin6I GCGC 2 cut(s) 1209, 1550
HinP1I GCGC 2 cut(s) 1209, 1550
HincII GTYRAC 1 cut(s) 462
HindII GTYRAC 1 cut(s) 462
HpaII CCGG 4 cut(s) 15, 95, 491, 1572
HphI GGTGA 2 cut(s) 794, 1489
Hpy166II GTNNAC 5 cut(s) 370, 462, 706, 1127, 1885
Hpy188I TCNGA 4 cut(s) 1021, 1072, 1191, 1939
Hpy8I GTNNAC 5 cut(s) 370, 462, 706, 1127, 1885
HpyAV CCTTC 4 cut(s) 400, 911, 1267, 1858
HpyCH4III ACNGT 6 cut(s) 367, 526, 782, 1005, 1594, 1792
HpyF10VI GCNNNNNNNGC 7 cut(s) 100, 136, 211, 1073, 1568, 1964, 2046
HpyF3I CTNAG 7 cut(s) 260, 669, 1228, 1264, 1285, 1913, 1936
Hsp92II CATG 7 cut(s) 419, 572, 1086, 1380, 1651, 1924, 1982
HspAI GCGC 2 cut(s) 1209, 1550
Kpn2I TCCGGA 1 cut(s) 14
KpnI GGTACC 1 cut(s) 1593
Ksp22I TGATCA 4 cut(s) 807, 1021, 1131, 1650
LmnI GCTCC 5 cut(s) 100, 889, 1148, 1424, 1726
Lsp1109I GCAGC 2 cut(s) 833, 1855
MaeI CTAG 5 cut(s) 740, 818, 1496, 1559, 2016
MaeIII GTNAC 4 cut(s) 813, 1477, 1786, 1993
MboII GAAGA 6 cut(s) 163, 721, 727, 805, 1351, 1819
MflI RGATCY 1 cut(s) 828
MhlI GDGCHC 2 cut(s) 183, 216
MlsI TGGCCA 1 cut(s) 251
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 3 cut(s) 463, 1365, 1630
MmeI TCCRAC 2 cut(s) 1024, 1842
Mox20I TGGCCA 1 cut(s) 251
Mph1103I ATGCAT 2 cut(s) 586, 1300
MroI TCCGGA 1 cut(s) 14
MscI TGGCCA 1 cut(s) 251
MseI TTAA 5 cut(s) 167, 299, 399, 1485, 1722
MslI CAYNNNNRTG 2 cut(s) 375, 1983
Msp20I TGGCCA 1 cut(s) 251
MspA1I CMGCKG 3 cut(s) 451, 614, 824
MspI CCGG 4 cut(s) 15, 95, 491, 1572
MspR9I CCNGG 3 cut(s) 83, 1167, 2007
Mva1269I GAATGC 1 cut(s) 1552
MvaI CCWGG 3 cut(s) 83, 1167, 2007
MwoI GCNNNNNNNGC 7 cut(s) 100, 136, 211, 1073, 1568, 1964, 2046
NdeI CATATG 1 cut(s) 1963
NheI GCTAGC 1 cut(s) 2015
NlaIII CATG 7 cut(s) 419, 572, 1086, 1380, 1651, 1924, 1982
NlaIV GGNNCC 6 cut(s) 102, 745, 830, 1291, 1426, 1591
NmuCI GTSAC 3 cut(s) 813, 1477, 1993
NsiI ATGCAT 2 cut(s) 586, 1300
NspI RCATGY 2 cut(s) 572, 1086
PaeI GCATGC 1 cut(s) 1086
PagI TCATGA 1 cut(s) 1647
PctI GAATGC 1 cut(s) 1552
PfeI GAWTC 7 cut(s) 8, 224, 796, 1268, 1303, 1387, 1974
Pfl23II CGTACG 1 cut(s) 576
PkrI GCNGC 5 cut(s) 141, 616, 823, 1870, 2042
PleI GAGTC 3 cut(s) 463, 1364, 1630
PpsI GAGTC 3 cut(s) 463, 1364, 1630
PsiI TTATAA 1 cut(s) 591
Psp6I CCWGG 3 cut(s) 81, 1165, 2005
PspEI GGTNACC 1 cut(s) 1477
PspFI CCCAGC 2 cut(s) 824, 1450
PspGI CCWGG 3 cut(s) 81, 1165, 2005
PspLI CGTACG 1 cut(s) 576
PspN4I GGNNCC 6 cut(s) 102, 745, 830, 1291, 1426, 1591
PspPI GGNCC 4 cut(s) 79, 92, 128, 743
PstNI CAGNNNCTG 2 cut(s) 1790, 2012
PsuI RGATCY 1 cut(s) 828
PvuII CAGCTG 2 cut(s) 451, 824
RsaI GTAC 6 cut(s) 369, 578, 624, 779, 1591, 1886
RsaNI GTAC 6 cut(s) 368, 577, 623, 778, 1590, 1885
RseI CAYNNNNRTG 2 cut(s) 375, 1983
SaqAI TTAA 5 cut(s) 167, 299, 399, 1485, 1722
SatI GCNGC 5 cut(s) 140, 615, 822, 1869, 2041
Sau96I GGNCC 4 cut(s) 79, 92, 128, 743
SchI GAGTC 3 cut(s) 463, 1365, 1630
ScrFI CCNGG 3 cut(s) 83, 1167, 2007
SduI GDGCHC 2 cut(s) 183, 216
SfcI CTRYAG 1 cut(s) 973
SmiMI CAYNNNNRTG 2 cut(s) 375, 1983
SmlI CTYRAG 3 cut(s) 144, 1968, 2044
SmoI CTYRAG 3 cut(s) 144, 1968, 2044
SphI GCATGC 1 cut(s) 1086
SsiI CCGC 3 cut(s) 140, 614, 2040
SspMI CTAG 5 cut(s) 740, 818, 1496, 1559, 2016
StyD4I CCNGG 3 cut(s) 81, 1165, 2005
StyI CCWWGG 2 cut(s) 739, 1428
TaaI ACNGT 6 cut(s) 367, 526, 782, 1005, 1594, 1792
TaqI TCGA 8 cut(s) 227, 521, 732, 1221, 1536, 1623, 1634, 1754
TatI WGTACW 2 cut(s) 622, 1884
TauI GCSGC 3 cut(s) 142, 617, 2043
TfiI GAWTC 7 cut(s) 8, 224, 796, 1268, 1303, 1387, 1974
Tru1I TTAA 5 cut(s) 167, 299, 399, 1485, 1722
Tru9I TTAA 5 cut(s) 167, 299, 399, 1485, 1722
TscAI CASTG 2 cut(s) 1134, 1887
TseFI GTSAC 3 cut(s) 813, 1477, 1993
TseI GCWGC 2 cut(s) 821, 1868
Tsp45I GTSAC 3 cut(s) 813, 1477, 1993
TspDTI ATGAA 6 cut(s) 404, 650, 651, 838, 1503, 1819
TspGWI ACGGA 1 cut(s) 1437
TspRI CASTG 2 cut(s) 1134, 1887
XagI CCTNNNNNAGG 2 cut(s) 111, 1350
XapI RAATTY 6 cut(s) 845, 1490, 1527, 1682, 1801, 1907
XceI RCATGY 2 cut(s) 572, 1086
XcmI CCANNNNNNNNNTGG 1 cut(s) 895
XmaJI CCTAGG 1 cut(s) 739
XspI CTAG 5 cut(s) 740, 818, 1496, 1559, 2016
Zsp2I ATGCAT 2 cut(s) 586, 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.