AT5G60410

MIZ/SP-RING zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005389
Physical Location & Seq
Forward (+)
24294704 .. 24301157
6454 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G60410.3

Sequence Viewer

Length: 2622 bp
ATGGATTTGGAAGCTAATTGTAAGGAAAAACTTTCATATTTTCGGATAAAAGAGCTCAAGGATGTGCTCACTCAGCTGGGACTTTCGAAACAGGGAAAGAAGCAGGAACTTGTCGACCGGATCTTGACCCTTCTTTCTGATGAACAAGCTGCCAGGTTGTTGTCTAAAAAGAATACAGTGGCAAAGGAAGCAGTTGCCAAATTAGTGGACGATACATATAGGAAAATGCAAGTATCTGGGGCAAGTGATTTAGCATCAAAAGGACAAGTGAGTTCAGATACCAGTAATCTGAAAGTTAAGGGAGAGCCTGAAGACCCCTTCCAACCAGAAATTAAAGTTCGATGTGTTTGTGGAAACTCGCTAGAAACAGACTCAATGATACAGTGTGAGGATCCAAGATGCCATGTTTGGCAGCATGTTGGCTGTGTTATTCTCCCAGATAAGCCTATGGATGGGAATCCACCACTTCCGGAATCATTTTATTGTGAAATCTGCCGACTTACTCGAGCTGACCCATTTTGGGTTACAGTGGCACATCCACTCTCTCCAGTGAGGCTGACTGCAACGACTATCCCAAATGATGGTGCAAGCACAATGCAGAGTGTGGAGAGAACATTTCAAATCACAAGGGCAGACAAGGACCTTTTGGCCAAACCAGAGTACGATGTTCAGGCTTGGTGTATGCTCTTGAATGATAAAGTTCTCTTTAGGATGCAGTGGCCTCAGTATGCTGATCTGCAGGTCAATGGTGTGCCTGTACGTGCAATTAATCGACCTGGAGGACAGCTTTTGGGAGTCAACGGCCGCGACGATGGACCCATTATTACATCTTGTATTAGGGATGGAGTTAACAGAATATCCTTGAGTGGAGGTGACGTTCGGATTTTTTGTTTTGGGGTCAGACTTGTGAAGCGCAGGACTCTACAACAGGTTCTAAATTTGATTCCAGAAGAGGGTAAAGGGGAGACTTTTGAAGATGCTCTTGCACGTGTCCGCCGATGCATTGGAGGTGGAGGTGGAGATGATAATGCCGACAGTGATAGTGACATTGAAGTTGTTGCTGATTTCTTCGGTGTCAATCTTCGGTGTCCTATGAGCGGTTCTAGGATAAAAGTTGCTGGGAGATTTTTACCCTGTGTGCACATGGGCTGTTTTGACCTTGATGTGTTTGTGGAGTTGAATCAACGTTCCAGAAAGTGGCAGTGCCCTATTTGTCTGAAGAACTACTCAGTGGAGCATGTAATCGTCGATCCTTATTTTAACCGTATCACGTCTAAGATGAAGCATTGTGATGAAGAGGTGACTGAAATTGAAGTGAAACCTGATGGTTCTTGGCGTGTAAAGTTCAAAAGAGAGAGTGAGCGAAGGGAACTGGGGGAACTCTCACAGTGGCATGCACCTGATGGTAGCCTTTGCCCCTCTGCTGTTGATATTAAACGGAAGATGGAAATGTTACCGGTTAAGCAAGAAGGTTACTCAGATGGTCCAGCCCCGCTAAAACTTGGAATAAGGAAGAATCGTAATGGCATTTGGGAAGTTAGCAAACCTAATACAAATGGATTATCTTCCAGTAATAGGCAAGAAAAGGTTGGGTATCAGGAGAAGAATATTATACCAATGAGTAGTAGTGCTACTGGAAGTGGTAGGGATGGTGATGATGCAAGCGTAAACCAGGATGCTATTGGAACTTTTGACTTTGTAGCCAACGGCATGGAACTTGATTCCATTTCCATGAATGTTGATTCAGGTTATAACTTTCCTGACAGAAACCAATCTGGCGAGGGTGGAAATAATGAAGTCATCGTTCTGAGTGATTCTGATGACGAGAATGATTTAGTGATCACTCCAGGGCCTGCATACAGTGGTTGTCAAACAGATGGTGGACTTACTTTTCCACTGAACCCTCCTGGAATAATTAACTCATATAATGAGGACCCACACAGCATAGCTGGGGGAAGTTCAGGCTTAGGTCTTTTCAATGATGATGATGAATTTGATACGCCCCTTTGGTCATTTCCTTCTGAAACTCCAGAAGCCCCTGGGTTCCAACTATTTAGATCTGATGCTGACGTTTCAGGAGGTTTAGTTGGTTTGCATCATCATAGTCCACTAAACTGTTCTCCTGAAATAAATGGAGGTTATACCATGGCTCCTGAGACATCAATGGCATCTGTTCCTGTGGTTCCTGGCTCTACTGGCCGATCTGAAGCAAACGATGGCCTAGTTGACAATCCTCTTGCATTTGGTAGAGACGATCCCTCACTTCAAATATTTTTGCCAACAAAACCAGATGCTTCAGCTCAGTCGGGTTTTAAAAACCAAGCTGATATGTCAAATGGTCTCCGTAGTGAAGACTGGATCTCGCTTAGGCTAGGCGATAGCGCCTCTGGGAATCATGGAGATCCTGCAACTACAAACGGGATTAACTCAAGCCATCAGATGTCTACGAGGGAAGGTTCTATGGATACTACAACAGAGACTGCGTCGTTGCTTCTGGGTATGAATGACAGTAGACAAGACAAGGCAAAGAAGCAAAGATCAGATAATCCATTTTCATTTCCTCGCCAGAAGCGTTCTGTAAGACCTCGGATGTACCTCTCCATTGACTCGGATTCTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0001101 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006935 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009267 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009553 GO:0009593 GO:0009605 GO:0009628 GO:0009653 GO:0009787 GO:0009791 GO:0009826 GO:0009856 GO:0009908 GO:0009909 GO:0009910 GO:0009966 GO:0009987 GO:0009991 GO:0010035 GO:0010112 GO:0010113 GO:0010183 GO:0010247 GO:0010286 GO:0010337 GO:0010565 GO:0010646 GO:0010817 GO:0016036 GO:0016043 GO:0016049 GO:0016740 GO:0016925 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0019787 GO:0019789 GO:0022414 GO:0023051 GO:0031323 GO:0031347 GO:0031348 GO:0031667 GO:0031668 GO:0031669 GO:0032101 GO:0032102 GO:0032350 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035670 GO:0036211 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044706 GO:0045088 GO:0045824 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050826 GO:0050896 GO:0050918 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051301 GO:0051606 GO:0051704 GO:0051716 GO:0060560 GO:0061458 GO:0061659 GO:0061665 GO:0062012 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0071840 GO:0080134 GO:0090352 GO:0090567 GO:0099402 GO:0140096 GO:1901419 GO:1901564 GO:1901700 GO:1903314 GO:1905957 GO:2000026 GO:2000070 GO:2000241 GO:2000242
KEGG Pathways
Metabolic & Signaling
ko04120 ko04630 ko05160 map04120 map04630 map05160
Pfam Domains
Protein Families
PHD SAP zf-MIZ

Protein Analysis

873

Amino Acids

95.79

Weight (kDa)

5.07

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAP PF02037 11 - 44 2.9e-08 SAP domain
PHD_5 PF20826 111 - 166 5.1e-06 PhD finger domain
zf-MIZ PF02891 359 - 407 6.9e-19 MIZ/SP-RING zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1752
Acc36I ACCTGC 1 cut(s) 730
AccB7I CCANNNNNTGG 2 cut(s) 581, 1197
AccBSI CCGCTC 1 cut(s) 1098
AccI GTMKAC 3 cut(s) 114, 2444, 2512
AccII CGCG 1 cut(s) 807
AccIII TCCGGA 1 cut(s) 469
AciI CCGC 4 cut(s) 805, 994, 1098, 1493
AclI AACGTT 1 cut(s) 1186
AclWI GGATC 7 cut(s) 128, 386, 399, 1244, 2249, 2366, 2396
AcoI YGGCCR 3 cut(s) 648, 802, 2197
AcsI RAATTY 2 cut(s) 937, 1991
AcuI CTGAAG 4 cut(s) 330, 1238, 2226, 2280
AcvI CACGTG 1 cut(s) 989
AfaI GTAC 3 cut(s) 662, 759, 2594
AfiI CCNNNNNNNGG 7 cut(s) 452, 520, 581, 953, 1097, 1197, 1575
AflIII ACRYGT 1 cut(s) 988
AgeI ACCGGT 1 cut(s) 1456
AgsI TTSAA 9 cut(s) 620, 691, 974, 1052, 1180, 1313, 1348, 1978, 2267
AjiI CACGTC 1 cut(s) 1272
AjnI CCWGG 7 cut(s) 152, 775, 1671, 1846, 1906, 2038, 2185
AloI GAACNNNNNNTCC 2 cut(s) 861, 893
AluBI AGCT 9 cut(s) 14, 55, 76, 149, 509, 787, 1949, 2300, 2324
AluI AGCT 9 cut(s) 14, 55, 76, 149, 509, 787, 1949, 2300, 2324
Alw21I GWGCWC 3 cut(s) 57, 69, 1143
Alw26I GTCTC 5 cut(s) 959, 2150, 2244, 2345, 2471
Alw44I GTGCAC 1 cut(s) 1139
AlwI GGATC 7 cut(s) 128, 386, 399, 1244, 2249, 2366, 2396
AlwNI CAGNNNCTG 2 cut(s) 1853, 2480
Ama87I CYCGRG 1 cut(s) 504
Aor13HI TCCGGA 1 cut(s) 469
AoxI GGCC 6 cut(s) 648, 719, 802, 1850, 2197, 2218
ApaLI GTGCAC 1 cut(s) 1139
ApeKI GCWGC 2 cut(s) 149, 412
ApoI RAATTY 2 cut(s) 937, 1991
AseI ATTAAT 1 cut(s) 768
AsiGI ACCGGT 1 cut(s) 1456
AspLEI GCGC 2 cut(s) 915, 2384
AspS9I GGNCC 5 cut(s) 640, 815, 1484, 1850, 1933
AsuHPI GGTGA 3 cut(s) 884, 1312, 1664
AsuII TTCGAA 1 cut(s) 86
AvaI CYCGRG 1 cut(s) 504
AvaII GGWCC 4 cut(s) 640, 815, 1484, 1933
BaeGI GKGCMC 2 cut(s) 1143, 1208
BalI TGGCCA 1 cut(s) 650
BamHI GGATCC 1 cut(s) 391
BanII GRGCYC 1 cut(s) 57
BbrPI CACGTG 1 cut(s) 989
BbsI GAAGAC 2 cut(s) 318, 2358
Bbv12I GWGCWC 3 cut(s) 57, 69, 1143
BbvI GCAGC 2 cut(s) 136, 424
BceAI ACGGC 2 cut(s) 817, 1723
BciT130I CCWGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
BciVI GTATCC 1 cut(s) 2458
BclI TGATCA 1 cut(s) 1839
BcoDI GTCTC 5 cut(s) 959, 2150, 2244, 2345, 2471
BfaI CTAG 4 cut(s) 362, 1104, 2222, 2372
BfmI CTRYAG 1 cut(s) 737
BfoI RGCGCY 1 cut(s) 2385
BfuAI ACCTGC 1 cut(s) 730
BfuI GTATCC 1 cut(s) 2458
BglII AGATCT 1 cut(s) 2057
BisI GCNGC 3 cut(s) 150, 413, 805
BlsI GCNGC 3 cut(s) 151, 414, 806
Bme1390I CCNGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
Bme18I GGWCC 4 cut(s) 640, 815, 1484, 1933
BmeT110I CYCGRG 1 cut(s) 504
BmgBI CACGTC 1 cut(s) 1272
BmgT120I GGNCC 5 cut(s) 640, 815, 1484, 1850, 1933
BmiI GGNNCC 6 cut(s) 393, 817, 1935, 2045, 2151, 2184
BmrFI CCNGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
BmrI ACTGGG 1 cut(s) 1382
BmuI ACTGGG 1 cut(s) 1382
BpiI GAAGAC 2 cut(s) 318, 2358
BpmI CTGGAG 4 cut(s) 531, 798, 1830, 2013
Bpu10I CCTNAGC 2 cut(s) 1966, 2366
Bpu14I TTCGAA 1 cut(s) 86
BpuEI CTTGAG 3 cut(s) 41, 883, 2413
BsaAI YACGTR 2 cut(s) 761, 989
BsaBI GATNNNNATC 1 cut(s) 456
BsaI GGTCTC 1 cut(s) 2345
BsaJI CCNNGG 5 cut(s) 1847, 2038, 2039, 2145, 2585
BsaWI WCCGGW 3 cut(s) 117, 469, 1456
BsaXI ACNNNNNCTCC 6 cut(s) 861, 891, 2070, 2100, 2134, 2164
Bsc4I CCNNNNNNNGG 7 cut(s) 452, 520, 581, 953, 1097, 1197, 1575
Bse118I RCCGGY 1 cut(s) 1456
Bse1I ACTGG 7 cut(s) 282, 548, 1377, 1569, 1639, 2200, 2360
Bse8I GATNNNNATC 1 cut(s) 456
BseAI TCCGGA 1 cut(s) 469
BseBI CCWGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
BseDI CCNNGG 5 cut(s) 1847, 2038, 2039, 2145, 2585
BseGI GGATG 8 cut(s) 67, 457, 535, 717, 847, 1654, 1681, 2595
BseJI GATNNNNATC 1 cut(s) 456
BseLI CCNNNNNNNGG 7 cut(s) 452, 520, 581, 953, 1097, 1197, 1575
BseMII CTCAG 8 cut(s) 86, 737, 1242, 1491, 1799, 2145, 2315, 2607
BseNI ACTGG 7 cut(s) 282, 548, 1377, 1569, 1639, 2200, 2360
BseSI GKGCMC 2 cut(s) 1143, 1208
BseX3I CGGCCG 1 cut(s) 802
BseXI GCAGC 2 cut(s) 136, 424
BseYI CCCAGC 3 cut(s) 76, 1118, 1949
Bsh1236I CGCG 1 cut(s) 807
Bsh1285I CGRYCG 2 cut(s) 118, 805
BshFI GGCC 6 cut(s) 650, 721, 804, 1852, 2199, 2220
BshTI ACCGGT 1 cut(s) 1456
BsiEI CGRYCG 2 cut(s) 118, 805
BsiHKAI GWGCWC 3 cut(s) 57, 69, 1143
BsiHKCI CYCGRG 1 cut(s) 504
BsiSI CCGG 3 cut(s) 118, 470, 1457
BslFI GGGAC 1 cut(s) 93
BslI CCNNNNNNNGG 7 cut(s) 452, 520, 581, 953, 1097, 1197, 1575
BsmAI GTCTC 5 cut(s) 959, 2150, 2244, 2345, 2471
BsmBI CGTCTC 1 cut(s) 2244
BsmFI GGGAC 1 cut(s) 93
BsnI GGCC 6 cut(s) 650, 721, 804, 1852, 2199, 2220
Bso31I GGTCTC 1 cut(s) 2345
BsoBI CYCGRG 1 cut(s) 504
Bsp119I TTCGAA 1 cut(s) 86
Bsp1286I GDGCHC 4 cut(s) 57, 69, 1143, 1208
Bsp13I TCCGGA 1 cut(s) 469
Bsp19I CCATGG 1 cut(s) 2145
BspACI CCGC 4 cut(s) 805, 994, 1098, 1493
BspANI GGCC 6 cut(s) 650, 721, 804, 1852, 2199, 2220
BspCNI CTCAG 8 cut(s) 85, 736, 1241, 1490, 1800, 2146, 2314, 2608
BspEI TCCGGA 1 cut(s) 469
BspFNI CGCG 1 cut(s) 807
BspLI GGNNCC 6 cut(s) 393, 817, 1935, 2045, 2151, 2184
BspMAI CTGCAG 1 cut(s) 741
BspMI ACCTGC 1 cut(s) 730
BspPI GGATC 7 cut(s) 128, 386, 399, 1244, 2249, 2366, 2396
BspT104I TTCGAA 1 cut(s) 86
BspTNI GGTCTC 1 cut(s) 2345
BsrBI CCGCTC 1 cut(s) 1098
BsrFI RCCGGY 1 cut(s) 1456
BsrI ACTGG 7 cut(s) 282, 548, 1377, 1569, 1639, 2200, 2360
BssAI RCCGGY 1 cut(s) 1456
BssECI CCNNGG 5 cut(s) 1847, 2038, 2039, 2145, 2585
BssT1I CCWWGG 1 cut(s) 2145
Bst2UI CCWGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
Bst4CI ACNGT 9 cut(s) 178, 384, 529, 1037, 1265, 1389, 1862, 2117, 2510
Bst6I CTCTTC 2 cut(s) 945, 1290
BstBAI YACGTR 2 cut(s) 761, 989
BstBI TTCGAA 1 cut(s) 86
BstC8I GCNNGC 4 cut(s) 589, 1395, 1663, 1854
BstDSI CCRYGG 1 cut(s) 2145
BstF5I GGATG 8 cut(s) 67, 457, 535, 717, 847, 1654, 1681, 2595
BstFNI CGCG 1 cut(s) 807
BstH2I RGCGCY 1 cut(s) 2385
BstHHI GCGC 2 cut(s) 915, 2384
BstMAI GTCTC 5 cut(s) 959, 2150, 2244, 2345, 2471
BstMCI CGRYCG 2 cut(s) 118, 805
BstMWI GCNNNNNNNGC 3 cut(s) 73, 188, 2196
BstNI CCWGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
BstNSI RCATGY 3 cut(s) 419, 1241, 1397
BstSCI CCNGG 7 cut(s) 152, 775, 1671, 1846, 1906, 2038, 2185
BstSFI CTRYAG 1 cut(s) 737
BstSLI GKGCMC 2 cut(s) 1143, 1208
BstUI CGCG 1 cut(s) 807
BstV1I GCAGC 2 cut(s) 136, 424
BstV2I GAAGAC 2 cut(s) 318, 2358
BstX2I RGATCY 5 cut(s) 120, 391, 2057, 2358, 2401
BstXI CCANNNNNNTGG 2 cut(s) 205, 1711
BstYI RGATCY 5 cut(s) 120, 391, 2057, 2358, 2401
BstZI CGGCCG 1 cut(s) 802
BsuI GTATCC 1 cut(s) 2458
BsuRI GGCC 6 cut(s) 650, 721, 804, 1852, 2199, 2220
BtgI CCRYGG 1 cut(s) 2145
BtrI CACGTC 1 cut(s) 1272
BtsCI GGATG 8 cut(s) 67, 457, 535, 717, 847, 1654, 1681, 2595
BtsI GCAGTG 2 cut(s) 722, 1208
BveI ACCTGC 1 cut(s) 730
Cac8I GCNNGC 4 cut(s) 589, 1395, 1663, 1854
CaiI CAGNNNCTG 2 cut(s) 1853, 2480
CfoI GCGC 2 cut(s) 915, 2384
Cfr10I RCCGGY 1 cut(s) 1456
Cfr13I GGNCC 5 cut(s) 640, 815, 1484, 1850, 1933
CseI GACGC 1 cut(s) 2472
Csp6I GTAC 3 cut(s) 661, 758, 2593
CspAI ACCGGT 1 cut(s) 1456
CviAII CATG 9 cut(s) 404, 416, 1144, 1238, 1394, 1711, 1732, 2146, 2396
CviQI GTAC 3 cut(s) 661, 758, 2593
DraI TTTAAA 1 cut(s) 2314
EaeI YGGCCR 3 cut(s) 648, 802, 2197
EagI CGGCCG 1 cut(s) 802
Eam1104I CTCTTC 2 cut(s) 945, 1290
EarI CTCTTC 2 cut(s) 945, 1290
EciI GGCGGA 1 cut(s) 983
Ecl136II GAGCTC 1 cut(s) 55
EclXI CGGCCG 1 cut(s) 802
Eco130I CCWWGG 1 cut(s) 2145
Eco24I GRGCYC 1 cut(s) 57
Eco31I GGTCTC 1 cut(s) 2345
Eco47I GGWCC 4 cut(s) 640, 815, 1484, 1933
Eco52I CGGCCG 1 cut(s) 802
Eco53kI GAGCTC 1 cut(s) 55
Eco57I CTGAAG 4 cut(s) 330, 1238, 2226, 2280
Eco72I CACGTG 1 cut(s) 989
Eco88I CYCGRG 1 cut(s) 504
EcoICRI GAGCTC 1 cut(s) 55
EcoO109I RGGNCCY 3 cut(s) 640, 1850, 1933
EcoRII CCWGG 7 cut(s) 152, 775, 1671, 1846, 1906, 2038, 2185
EcoT14I CCWWGG 1 cut(s) 2145
EcoT22I ATGCAT 1 cut(s) 1004
EcoT38I GRGCYC 1 cut(s) 57
ErhI CCWWGG 1 cut(s) 2145
Esp3I CGTCTC 1 cut(s) 2244
FaeI CATG 9 cut(s) 407, 419, 1147, 1241, 1397, 1714, 1735, 2149, 2399
FalI AAGNNNNNCTT 2 cut(s) 966, 998
FaqI GGGAC 1 cut(s) 93
FatI CATG 9 cut(s) 403, 415, 1143, 1237, 1393, 1710, 1731, 2145, 2395
FauI CCCGC 1 cut(s) 1500
FbaI TGATCA 1 cut(s) 1839
FblI GTMKAC 3 cut(s) 114, 2444, 2512
Fnu4HI GCNGC 3 cut(s) 150, 413, 805
FokI GGATG 8 cut(s) 74, 464, 522, 724, 854, 1661, 1688, 2602
FriOI GRGCYC 1 cut(s) 57
Fsp4HI GCNGC 3 cut(s) 150, 413, 805
FspBI CTAG 4 cut(s) 362, 1104, 2222, 2372
GlaI GCGC 2 cut(s) 914, 2383
GluI GCNGC 3 cut(s) 150, 413, 805
GsaI CCCAGC 3 cut(s) 80, 1122, 1953
GsuI CTGGAG 4 cut(s) 531, 798, 1830, 2013
HaeII RGCGCY 1 cut(s) 2385
HaeIII GGCC 6 cut(s) 650, 721, 804, 1852, 2199, 2220
HapII CCGG 3 cut(s) 118, 470, 1457
HgaI GACGC 1 cut(s) 2472
HhaI GCGC 2 cut(s) 915, 2384
Hin1II CATG 9 cut(s) 407, 419, 1147, 1241, 1397, 1714, 1735, 2149, 2399
Hin6I GCGC 2 cut(s) 913, 2382
HinP1I GCGC 2 cut(s) 913, 2382
HincII GTYRAC 4 cut(s) 115, 799, 850, 2227
HindII GTYRAC 4 cut(s) 115, 799, 850, 2227
HpaI GTTAAC 1 cut(s) 850
HpaII CCGG 3 cut(s) 118, 470, 1457
HphI GGTGA 3 cut(s) 884, 1312, 1664
Hpy99I CGWCG 3 cut(s) 812, 1250, 2488
HpyAV CCTTC 6 cut(s) 140, 328, 1359, 1463, 2028, 2447
HpyCH4III ACNGT 9 cut(s) 178, 384, 529, 1037, 1265, 1389, 1862, 2117, 2510
HpyCH4IV ACGT 6 cut(s) 760, 876, 988, 1186, 1271, 2070
HpyF10VI GCNNNNNNNGC 3 cut(s) 73, 188, 2196
HpySE526I ACGT 6 cut(s) 760, 876, 988, 1186, 1271, 2070
Hsp92II CATG 9 cut(s) 407, 419, 1147, 1241, 1397, 1714, 1735, 2149, 2399
HspAI GCGC 2 cut(s) 913, 2382
Kpn2I TCCGGA 1 cut(s) 469
Ksp22I TGATCA 1 cut(s) 1839
KspAI GTTAAC 1 cut(s) 850
LmnI GCTCC 2 cut(s) 1234, 2155
Lsp1109I GCAGC 2 cut(s) 136, 424
MaeI CTAG 4 cut(s) 362, 1104, 2222, 2372
MaeII ACGT 6 cut(s) 760, 876, 988, 1186, 1271, 2070
MaeIII GTNAC 6 cut(s) 523, 872, 1043, 1300, 1452, 1472
MbiI CCGCTC 1 cut(s) 1098
MflI RGATCY 5 cut(s) 120, 391, 2057, 2358, 2401
MhlI GDGCHC 4 cut(s) 57, 69, 1143, 1208
MlsI TGGCCA 1 cut(s) 650
MluCI AATT 8 cut(s) 16, 200, 330, 765, 937, 1308, 1914, 1991
MluNI TGGCCA 1 cut(s) 650
MlyI GAGTC 4 cut(s) 365, 804, 913, 2600
MmeI TCCRAC 2 cut(s) 346, 2071
Mox20I TGGCCA 1 cut(s) 650
Mph1103I ATGCAT 1 cut(s) 1004
MroI TCCGGA 1 cut(s) 469
MscI TGGCCA 1 cut(s) 650
MslI CAYNNNNRTG 2 cut(s) 1290, 1730
Msp20I TGGCCA 1 cut(s) 650
MspA1I CMGCKG 1 cut(s) 76
MspI CCGG 3 cut(s) 118, 470, 1457
MspR9I CCNGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
MvaI CCWGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
MvnI CGCG 1 cut(s) 807
MwoI GCNNNNNNNGC 3 cut(s) 73, 188, 2196
NcoI CCATGG 1 cut(s) 2145
NlaIII CATG 9 cut(s) 407, 419, 1147, 1241, 1397, 1714, 1735, 2149, 2399
NlaIV GGNNCC 6 cut(s) 393, 817, 1935, 2045, 2151, 2184
NmuCI GTSAC 3 cut(s) 872, 1043, 1300
NsiI ATGCAT 1 cut(s) 1004
NspI RCATGY 3 cut(s) 419, 1241, 1397
NspV TTCGAA 1 cut(s) 86
PaeI GCATGC 1 cut(s) 1397
PaeR7I CTCGAG 1 cut(s) 504
PasI CCCWGGG 1 cut(s) 2039
PcsI WCGNNNNNNNCGW 3 cut(s) 807, 994, 2569
PflFI GACNNNGTC 1 cut(s) 2482
PflMI CCANNNNNTGG 2 cut(s) 581, 1197
PfoI TCCNGGA 1 cut(s) 1906
PinAI ACCGGT 1 cut(s) 1456
PkrI GCNGC 3 cut(s) 151, 414, 806
PleI GAGTC 4 cut(s) 365, 803, 913, 2600
PmaCI CACGTG 1 cut(s) 989
PmlI CACGTG 1 cut(s) 989
PpsI GAGTC 4 cut(s) 365, 803, 913, 2600
Ppu21I YACGTR 2 cut(s) 761, 989
PpuMI RGGWCCY 2 cut(s) 640, 1933
PshBI ATTAAT 1 cut(s) 768
PsiI TTATAA 1 cut(s) 1752
Psp124BI GAGCTC 1 cut(s) 57
Psp1406I AACGTT 1 cut(s) 1186
Psp5II RGGWCCY 2 cut(s) 640, 1933
Psp6I CCWGG 7 cut(s) 152, 775, 1671, 1846, 1906, 2038, 2185
PspCI CACGTG 1 cut(s) 989
PspFI CCCAGC 3 cut(s) 76, 1118, 1949
PspGI CCWGG 7 cut(s) 152, 775, 1671, 1846, 1906, 2038, 2185
PspN4I GGNNCC 6 cut(s) 393, 817, 1935, 2045, 2151, 2184
PspPI GGNCC 5 cut(s) 640, 815, 1484, 1850, 1933
PspPPI RGGWCCY 2 cut(s) 640, 1933
PspXI VCTCGAGB 1 cut(s) 504
PstI CTGCAG 1 cut(s) 741
PstNI CAGNNNCTG 2 cut(s) 1853, 2480
PsuI RGATCY 5 cut(s) 120, 391, 2057, 2358, 2401
PsyI GACNNNGTC 1 cut(s) 2482
PvuII CAGCTG 1 cut(s) 76
RsaI GTAC 3 cut(s) 662, 759, 2594
RsaNI GTAC 3 cut(s) 661, 758, 2593
RseI CAYNNNNRTG 2 cut(s) 1290, 1730
SacI GAGCTC 1 cut(s) 57
SalI GTCGAC 1 cut(s) 113
SatI GCNGC 3 cut(s) 150, 413, 805
Sau96I GGNCC 5 cut(s) 640, 815, 1484, 1850, 1933
SchI GAGTC 4 cut(s) 365, 804, 913, 2600
ScrFI CCNGG 7 cut(s) 154, 777, 1673, 1848, 1908, 2040, 2187
SduI GDGCHC 4 cut(s) 57, 69, 1143, 1208
SfcI CTRYAG 1 cut(s) 737
Sfr274I CTCGAG 1 cut(s) 504
SfuI TTCGAA 1 cut(s) 86
SinI GGWCC 4 cut(s) 640, 815, 1484, 1933
SlaI CTCGAG 1 cut(s) 504
SmiMI CAYNNNNRTG 2 cut(s) 1290, 1730
SmlI CTYRAG 4 cut(s) 56, 504, 862, 2428
SmoI CTYRAG 4 cut(s) 56, 504, 862, 2428
SphI GCATGC 1 cut(s) 1397
Sse9I AATT 8 cut(s) 16, 200, 330, 765, 937, 1308, 1914, 1991
SsiI CCGC 4 cut(s) 805, 994, 1098, 1493
SspI AATATT 2 cut(s) 1609, 2271
SspMI CTAG 4 cut(s) 362, 1104, 2222, 2372
SstI GAGCTC 1 cut(s) 57
StyD4I CCNGG 7 cut(s) 152, 775, 1671, 1846, 1906, 2038, 2185
StyI CCWWGG 1 cut(s) 2145
TaaI ACNGT 9 cut(s) 178, 384, 529, 1037, 1265, 1389, 1862, 2117, 2510
TaiI ACGT 6 cut(s) 763, 879, 991, 1189, 1274, 2073
TaqI TCGA 6 cut(s) 86, 114, 340, 505, 772, 1248
TasI AATT 8 cut(s) 16, 200, 330, 765, 937, 1308, 1914, 1991
TauI GCSGC 1 cut(s) 807
TseFI GTSAC 3 cut(s) 872, 1043, 1300
TseI GCWGC 2 cut(s) 149, 412
Tsp45I GTSAC 3 cut(s) 872, 1043, 1300
TspDTI ATGAA 9 cut(s) 24, 156, 1295, 1308, 1748, 1809, 2004, 2516, 2544
TspGWI ACGGA 2 cut(s) 1453, 2333
Tth111I GACNNNGTC 1 cut(s) 2482
Van91I CCANNNNNTGG 2 cut(s) 581, 1197
VneI GTGCAC 1 cut(s) 1139
VpaK11BI GGWCC 4 cut(s) 640, 815, 1484, 1933
VspI ATTAAT 1 cut(s) 768
XapI RAATTY 2 cut(s) 937, 1991
XceI RCATGY 3 cut(s) 419, 1241, 1397
XcmI CCANNNNNNNNNTGG 1 cut(s) 1679
XhoI CTCGAG 1 cut(s) 504
XmiI GTMKAC 3 cut(s) 114, 2444, 2512
XspI CTAG 4 cut(s) 362, 1104, 2222, 2372
Zsp2I ATGCAT 1 cut(s) 1004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.