RchiOBHm_Chr5g0060321

E3 SUMO-protein ligase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
65464272 .. 65476120
11849 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33679

Sequence Viewer

Length: 2661 bp
ATGGATTTGGTAGCTAGTTGCAAGGAAAAGTTGGCATATTTTCGGATAAAAGAGCTTAAGGATGTTCTCACTCAATTAGGTCTTTCAAAGCAGGGGAAGAAGCAGGATCTTGTTGAAAGGATATTGTCCATTCTTTCTGATGAGCAAGTTTCAAAATTGTGGCCAAAGAAGACTGCTGTTGGAAAGGAACAGGTGGCAGAACTTGTAGATGATACCTATAGAAAAATGCAGATATCTGGGGCCACAACTGATTTAGCATCAAAGGGACAATGCATCTCTGATTGCAGTAATGTGAAAGTTAAAGGTGAAATTGATGACCACTTCCACTCAGATATAAAGGTTCGTTGTCTCTGCGGGAATTCATTAGAAACAGAGTCAATGATCAAGTGTGAGGACCTGAGATGTCGTGTTTGGCAACACATGGGTTGCGTTATAATTCCAGAGAAACCGATGGAAGGCAATCCACCAGTTCCGGAATTGTTTTACTGTGAACTATGTCGACTAAGTCGGGCTGACCCGTTTTGGGTTACTGTGCTACATCCTTTACATCCCGTGAAGTTGAATGTTACTAATATTCCGACTGATGGCTCAAACCCTGTACAAAGTGTGGATAAAACATTTCAACTCACAAGAGCGGACAGGGACTTACTGTCTAAACAAGAATATGATGTTCAGGCTTGGTGCATGCTTTTAAATGACAAAGTTTCCTTCAGGATGCAATGGCCACAATATGCAGATCTACAGGTCAATGGTATGCCTGTTCGTGCAATTAATAGACCTGGTTCGCAACTTCTTGGAGCTAATGGTCGTGATGATGGTCCAATTATCACACCATACACGAGAGACGGAATTAATAAGATTTGCTTAACAGGATGTGATGCCCGTATTTTCTGCTTAGGGGTTCGTATTGTGAAGAGGCGCACTGTCCAACAGATTCTCAACCTGATTCCCAAGGAGTCTGATGGTGAGCGTTTTGAAGATGCTCTTGCTCGTGTTTGTCGTTGTGTGGGTGGTGGCACTGCAATGGATAATGCTGATAGTGACAGTGACTTGGAAGTCGTGGCAGATTCGTTTACCGTCAACCTACGTTGTCCTATGAGTGGTTCAAGGATGAAGGTTGCTGGTAGATTCAAACCTTGTCTTCACATGGGCTGTTTTGATCTTGATGTTTTTGTTGAACTAAATCAGCGCTCAAGGAAGGCAAGCTTCTACACCTTGTGTTGGCAATGTCCAATTTGTCTAAAGAACTATGCGCTGGAGAATGTTATTATTGATCCTTATTTTAATCGTATAGCTTCCAAGATGAGGCATTGTGGAGAAGATGTTGCAGAGATTGAGGTGAAGCCTGATGGTTCTTGGCGAGTGAAGGTTAAAAGTGAAAGTGAACGCAGGGAACTTGGGGAACTTGGGCGGTGGCACCTTCCTGATAGTACGCTTTGCGTTCCAACACATGGAGAAACTATCCCAAAATCTGAAGTGTTGAAGCCGGTCAAACAGGAAGGGGTTTCAGAAGGTCATACTGGTTTGAAACTAGGAATCAGAAAGAACCGGAATGGTGTTTGGGAATTCAGCAGACCTGAAGAAATGAACACCTCTTCTGGTAATAAATTACAACAGCAGTTTGGAGAACATGAGCTAAAAGTTATCCCCATGAGTAGCAGTGCCACTGGGAGTGGTAGGGATGGTGAAGATGCAAGTGTAAATCAGGAGGGTGGTGGGAATTTTGATTTCTCTACAAACAATGGAATAGAGATGGATTCTTTTTCTCTGAATGTTGATTCAGCATATGGATTTGCGGGACCAAATTCTTCTGCACCAGTAGGAGATGCTGATGTTATTGTACTAAGTGATTCAGATGAAGAAATAATGCCTTCTGAAACCATTTATGGGACTAATTTTACTGATGCTGGTGGGATTGGTTTTCCCATGCCCGCTTCTGGAATTGCTGATTCTTATGGTGAAGATCCCGTGCTTGCTAATGGTGGAAATTCATGCTTGGGTCTTTTTAGTGGCAATGATGATGAATATATGTCCAACTGGTCATCATTACCTCCTGGAACTCATACTAACCCTGGATTCCAATTATTTAGTTCTGAGGCAGATCTACCAGATCCCCTGTGTCTCCCGCAGGATTCTGTAAATTGTTCCACATCTATGAATGGATACACTTTGGCTCCAGAAACTGCCATGGGATCTGCTACTCTAGCCCATGAATCATCTGTTGGTCCTTTAGATGCTGACATGAACGATGGCTTAGTTGACAATCCCTTGGCTTTTGCTGGTGATGATCCCTCTCTTCAAATATTTCTTCCCACAAGACCATCAGATGCATCACTTCAATCCAATTTGAGAGATCGGGCTGATGTGTCGAATGGTGTTCAATCGGAGGATTGGATATCTCTTAGGCTAGGGGGTGATGCCAGTGGCATTAAAGGAGAATCTGGAACTCCAAATGGACAGATTTCGAAACGGCATGTGCCATCTAGAGAAGCTACAATGAATTCTTTGGCTGAAGCTTCTTTGCTTCTCGGTATGAATAATGACAGTGGCAGATCTGACAAGAGAAGTAGGCCGAGATCAAATAGTCCCTTTTCATTTCCTCGCCAAAAACGTTCTTCAAGAACACGGTTGTTTCTTTCTATTGACTCTGACTCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0001101 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006935 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009267 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009553 GO:0009593 GO:0009605 GO:0009628 GO:0009653 GO:0009787 GO:0009791 GO:0009826 GO:0009856 GO:0009908 GO:0009909 GO:0009910 GO:0009966 GO:0009987 GO:0009991 GO:0010035 GO:0010112 GO:0010113 GO:0010183 GO:0010247 GO:0010286 GO:0010337 GO:0010565 GO:0010646 GO:0010817 GO:0016036 GO:0016043 GO:0016049 GO:0016740 GO:0016925 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0019787 GO:0019789 GO:0022414 GO:0023051 GO:0031323 GO:0031347 GO:0031348 GO:0031667 GO:0031668 GO:0031669 GO:0032101 GO:0032102 GO:0032350 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035670 GO:0036211 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044706 GO:0045088 GO:0045824 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050826 GO:0050896 GO:0050918 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051301 GO:0051606 GO:0051704 GO:0051716 GO:0060560 GO:0061458 GO:0061659 GO:0061665 GO:0062012 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0071840 GO:0080134 GO:0090352 GO:0090567 GO:0099402 GO:0140096 GO:1901419 GO:1901564 GO:1901700 GO:1903314 GO:1905957 GO:2000026 GO:2000070 GO:2000241 GO:2000242
Pfam Domains
Protein Families

Protein Analysis

886

Amino Acids

97.18

Weight (kDa)

5.13

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAP PF02037 14 - 42 1.1e-07 SAP domain
zf-MIZ PF02891 360 - 415 8.5e-16 MIZ/SP-RING zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 434
AasI GACNNNNNNGTC 1 cut(s) 1055
AccB1I GGYRCC 1 cut(s) 1416
AccB7I CCANNNNNTGG 1 cut(s) 1451
AccBSI CCGCTC 1 cut(s) 635
AccI GTMKAC 1 cut(s) 499
AccIII TCCGGA 1 cut(s) 472
AciI CCGC 6 cut(s) 354, 635, 1411, 1796, 1932, 2126
AclI AACGTT 1 cut(s) 2611
AclWI GGATC 6 cut(s) 114, 1268, 1958, 2105, 2200, 2282
AcoI YGGCCR 2 cut(s) 161, 722
AcsI RAATTY 6 cut(s) 358, 1565, 1720, 1804, 1987, 2500
AcuI CTGAAG 4 cut(s) 694, 1494, 1599, 2532
AdeI CACNNNGTG 1 cut(s) 1218
AfaI GTAC 3 cut(s) 600, 1432, 1842
AfeI AGCGCT 1 cut(s) 1190
AfiI CCNNNNNNNGG 9 cut(s) 455, 523, 584, 1100, 1221, 1305, 1451, 1887, 1937
AflII CTTAAG 1 cut(s) 56
AhdI GACNNNNNGTC 1 cut(s) 649
AjnI CCWGG 3 cut(s) 778, 2053, 2071
AjuI GAANNNNNNNTTGG 2 cut(s) 2205, 2237
AluBI AGCT 8 cut(s) 14, 55, 800, 1206, 1295, 1636, 2492, 2516
AluI AGCT 8 cut(s) 14, 55, 800, 1206, 1295, 1636, 2492, 2516
Alw26I GTCTC 3 cut(s) 353, 837, 2126
AlwI GGATC 6 cut(s) 114, 1268, 1958, 2105, 2200, 2282
AlwNI CAGNNNCTG 1 cut(s) 2183
Aor13HI TCCGGA 1 cut(s) 472
Aor51HI AGCGCT 1 cut(s) 1190
AoxI GGCC 4 cut(s) 161, 240, 722, 2570
ApoI RAATTY 6 cut(s) 358, 1565, 1720, 1804, 1987, 2500
AseI ATTAAT 2 cut(s) 771, 852
AspLEI GCGC 3 cut(s) 921, 1191, 1255
AspS9I GGNCC 5 cut(s) 240, 394, 818, 1799, 2225
AsuHPI GGTGA 7 cut(s) 317, 977, 1351, 1697, 1970, 2294, 2426
AsuII TTCGAA 1 cut(s) 2465
AvaII GGWCC 4 cut(s) 394, 818, 1799, 2225
BalI TGGCCA 2 cut(s) 163, 724
BanI GGYRCC 1 cut(s) 1416
BauI CACGAG 2 cut(s) 838, 990
BbsI GAAGAC 2 cut(s) 176, 1133
BceAI ACGGC 1 cut(s) 2486
BciT130I CCWGG 3 cut(s) 780, 2055, 2073
BciVI GTATCC 1 cut(s) 2156
BclI TGATCA 1 cut(s) 381
BcoDI GTCTC 3 cut(s) 353, 837, 2126
BfaI CTAG 5 cut(s) 15, 1532, 2204, 2408, 2484
BfmI CTRYAG 2 cut(s) 217, 740
BfoI RGCGCY 1 cut(s) 1192
BfrI CTTAAG 1 cut(s) 56
BfuI GTATCC 1 cut(s) 2156
BglII AGATCT 3 cut(s) 736, 2101, 2552
Bme1390I CCNGG 3 cut(s) 780, 2055, 2073
Bme18I GGWCC 4 cut(s) 394, 818, 1799, 2225
BmeRI GACNNNNNGTC 1 cut(s) 649
BmgT120I GGNCC 5 cut(s) 240, 394, 818, 1799, 2225
BmiI GGNNCC 4 cut(s) 241, 1418, 1800, 2175
BmrFI CCNGG 3 cut(s) 780, 2055, 2073
BmrI ACTGGG 1 cut(s) 1677
BmuI ACTGGG 1 cut(s) 1677
BpiI GAAGAC 2 cut(s) 176, 1133
BpmI CTGGAG 2 cut(s) 1277, 2160
Bpu10I CCTNAGC 1 cut(s) 895
Bpu14I TTCGAA 1 cut(s) 2465
BpuEI CTTGAG 1 cut(s) 1177
BsaJI CCNNGG 4 cut(s) 951, 2071, 2187, 2268
BsaWI WCCGGW 2 cut(s) 472, 1548
BsaXI ACNNNNNCTCC 4 cut(s) 1308, 1338, 2158, 2188
Bsc4I CCNNNNNNNGG 9 cut(s) 455, 523, 584, 1100, 1221, 1305, 1451, 1887, 1937
Bse118I RCCGGY 1 cut(s) 1486
Bse1I ACTGG 6 cut(s) 467, 1525, 1672, 1817, 2042, 2421
Bse3DI GCAATG 4 cut(s) 725, 1029, 1232, 2020
BseAI TCCGGA 1 cut(s) 472
BseBI CCWGG 3 cut(s) 780, 2055, 2073
BseDI CCNNGG 4 cut(s) 951, 2071, 2187, 2268
BseGI GGATG 7 cut(s) 67, 538, 547, 720, 878, 1116, 1687
BseLI CCNNNNNNNGG 9 cut(s) 455, 523, 584, 1100, 1221, 1305, 1451, 1887, 1937
BseMI GCAATG 4 cut(s) 725, 1029, 1232, 2020
BseMII CTCAG 3 cut(s) 342, 389, 2085
BseNI ACTGG 6 cut(s) 467, 1525, 1672, 1817, 2042, 2421
BsgI GTGCAG 1 cut(s) 1797
BshFI GGCC 4 cut(s) 163, 242, 724, 2572
BshNI GGYRCC 1 cut(s) 1416
BsiSI CCGG 3 cut(s) 473, 1487, 1549
BslFI GGGAC 5 cut(s) 279, 656, 1812, 1903, 2571
BslI CCNNNNNNNGG 9 cut(s) 455, 523, 584, 1100, 1221, 1305, 1451, 1887, 1937
BsmAI GTCTC 3 cut(s) 353, 837, 2126
BsmBI CGTCTC 1 cut(s) 837
BsmFI GGGAC 5 cut(s) 279, 656, 1812, 1903, 2571
BsnI GGCC 4 cut(s) 163, 242, 724, 2572
Bsp119I TTCGAA 1 cut(s) 2465
Bsp13I TCCGGA 1 cut(s) 472
Bsp1407I TGTACA 1 cut(s) 598
Bsp19I CCATGG 1 cut(s) 2187
BspACI CCGC 6 cut(s) 354, 635, 1411, 1796, 1932, 2126
BspANI GGCC 4 cut(s) 163, 242, 724, 2572
BspCNI CTCAG 3 cut(s) 341, 390, 2086
BspEI TCCGGA 1 cut(s) 472
BspLI GGNNCC 4 cut(s) 241, 1418, 1800, 2175
BspPI GGATC 6 cut(s) 114, 1268, 1958, 2105, 2200, 2282
BspT104I TTCGAA 1 cut(s) 2465
BspT107I GGYRCC 1 cut(s) 1416
BspTI CTTAAG 1 cut(s) 56
BsrBI CCGCTC 1 cut(s) 635
BsrDI GCAATG 4 cut(s) 725, 1029, 1232, 2020
BsrFI RCCGGY 1 cut(s) 1486
BsrGI TGTACA 1 cut(s) 598
BsrI ACTGG 6 cut(s) 467, 1525, 1672, 1817, 2042, 2421
BssAI RCCGGY 1 cut(s) 1486
BssECI CCNNGG 4 cut(s) 951, 2071, 2187, 2268
BssSI CACGAG 2 cut(s) 838, 990
BssT1I CCWWGG 3 cut(s) 951, 2187, 2268
Bst2BI CACGAG 2 cut(s) 838, 990
Bst2UI CCWGG 3 cut(s) 780, 2055, 2073
Bst4CI ACNGT 8 cut(s) 488, 532, 651, 925, 1046, 1078, 2546, 2628
Bst6I CTCTTC 3 cut(s) 908, 1600, 2301
BstAFI CTTAAG 1 cut(s) 56
BstAUI TGTACA 1 cut(s) 598
BstBI TTCGAA 1 cut(s) 2465
BstC8I GCNNGC 4 cut(s) 686, 1204, 1932, 1974
BstDEI CTNAG 8 cut(s) 328, 398, 503, 895, 1844, 2094, 2254, 2402
BstDSI CCRYGG 1 cut(s) 2187
BstF5I GGATG 7 cut(s) 67, 538, 547, 720, 878, 1116, 1687
BstH2I RGCGCY 1 cut(s) 1192
BstHHI GCGC 3 cut(s) 921, 1191, 1255
BstMAI GTCTC 3 cut(s) 353, 837, 2126
BstMWI GCNNNNNNNGC 1 cut(s) 2204
BstNI CCWGG 3 cut(s) 780, 2055, 2073
BstNSI RCATGY 2 cut(s) 688, 2477
BstSCI CCNGG 3 cut(s) 778, 2053, 2071
BstSFI CTRYAG 2 cut(s) 217, 740
BstV2I GAAGAC 2 cut(s) 176, 1133
BstX2I RGATCY 7 cut(s) 106, 736, 1963, 2101, 2110, 2192, 2552
BstYI RGATCY 7 cut(s) 106, 736, 1963, 2101, 2110, 2192, 2552
BsuI GTATCC 1 cut(s) 2156
BsuRI GGCC 4 cut(s) 163, 242, 724, 2572
BtgI CCRYGG 1 cut(s) 2187
BtsCI GGATG 7 cut(s) 67, 538, 547, 720, 878, 1116, 1687
BtsI GCAGTG 2 cut(s) 1017, 1666
BtsIMutI CAGTG 7 cut(s) 921, 1017, 1051, 1665, 1666, 2428, 2551
Cac8I GCNNGC 4 cut(s) 686, 1204, 1932, 1974
CaiI CAGNNNCTG 1 cut(s) 2183
CfoI GCGC 3 cut(s) 921, 1191, 1255
Cfr10I RCCGGY 1 cut(s) 1486
Cfr13I GGNCC 5 cut(s) 240, 394, 818, 1799, 2225
CsiI ACCWGGT 1 cut(s) 778
Csp6I GTAC 3 cut(s) 599, 1431, 1841
CviQI GTAC 3 cut(s) 599, 1431, 1841
DdeI CTNAG 8 cut(s) 328, 398, 503, 895, 1844, 2094, 2254, 2402
DraI TTTAAA 1 cut(s) 693
DraIII CACNNNGTG 1 cut(s) 1218
DrdI GACNNNNNNGTC 1 cut(s) 1055
DriI GACNNNNNGTC 1 cut(s) 649
DseDI GACNNNNNNGTC 1 cut(s) 1055
EaeI YGGCCR 2 cut(s) 161, 722
Eam1104I CTCTTC 3 cut(s) 908, 1600, 2301
Eam1105I GACNNNNNGTC 1 cut(s) 649
EarI CTCTTC 3 cut(s) 908, 1600, 2301
Eco130I CCWWGG 3 cut(s) 951, 2187, 2268
Eco32I GATATC 2 cut(s) 234, 2397
Eco47I GGWCC 4 cut(s) 394, 818, 1799, 2225
Eco47III AGCGCT 1 cut(s) 1190
Eco57I CTGAAG 4 cut(s) 694, 1494, 1599, 2532
EcoO109I RGGNCCY 1 cut(s) 394
EcoRI GAATTC 3 cut(s) 358, 1565, 2500
EcoRII CCWGG 3 cut(s) 778, 2053, 2071
EcoRV GATATC 2 cut(s) 234, 2397
EcoT14I CCWWGG 3 cut(s) 951, 2187, 2268
EcoT22I ATGCAT 2 cut(s) 275, 2332
ErhI CCWWGG 3 cut(s) 951, 2187, 2268
Esp3I CGTCTC 1 cut(s) 837
FalI AAGNNNNNCTT 6 cut(s) 848, 880, 969, 1001, 1190, 1222
FaqI GGGAC 5 cut(s) 279, 656, 1812, 1903, 2571
FauI CCCGC 4 cut(s) 347, 1789, 1939, 2133
FauNDI CATATG 1 cut(s) 1786
FbaI TGATCA 1 cut(s) 381
FblI GTMKAC 1 cut(s) 499
FokI GGATG 7 cut(s) 74, 525, 534, 727, 885, 1123, 1694
FspBI CTAG 5 cut(s) 15, 1532, 2204, 2408, 2484
GlaI GCGC 3 cut(s) 920, 1190, 1254
GsuI CTGGAG 2 cut(s) 1277, 2160
HaeII RGCGCY 1 cut(s) 1192
HaeIII GGCC 4 cut(s) 163, 242, 724, 2572
HapII CCGG 3 cut(s) 473, 1487, 1549
HhaI GCGC 3 cut(s) 921, 1191, 1255
Hin6I GCGC 3 cut(s) 919, 1189, 1253
HinP1I GCGC 3 cut(s) 919, 1189, 1253
HincII GTYRAC 3 cut(s) 500, 1081, 2260
HindII GTYRAC 3 cut(s) 500, 1081, 2260
HindIII AAGCTT 2 cut(s) 1204, 2514
HpaII CCGG 3 cut(s) 473, 1487, 1549
HphI GGTGA 7 cut(s) 317, 977, 1351, 1697, 1970, 2294, 2426
Hpy166II GTNNAC 6 cut(s) 491, 500, 1074, 1081, 1385, 2260
Hpy8I GTNNAC 6 cut(s) 491, 500, 1074, 1081, 1385, 2260
HpyAV CCTTC 9 cut(s) 449, 718, 1108, 1192, 1360, 1430, 1493, 1505, 1881
HpyCH4III ACNGT 8 cut(s) 488, 532, 651, 925, 1046, 1078, 2546, 2628
HpyCH4IV ACGT 2 cut(s) 1087, 2611
HpyF10VI GCNNNNNNNGC 1 cut(s) 2204
HpyF3I CTNAG 8 cut(s) 328, 398, 503, 895, 1844, 2094, 2254, 2402
HpySE526I ACGT 2 cut(s) 1087, 2611
HspAI GCGC 3 cut(s) 919, 1189, 1253
Kpn2I TCCGGA 1 cut(s) 472
Ksp22I TGATCA 1 cut(s) 381
LmnI GCTCC 2 cut(s) 797, 2179
MabI ACCWGGT 1 cut(s) 778
MaeI CTAG 5 cut(s) 15, 1532, 2204, 2408, 2484
MaeII ACGT 2 cut(s) 1087, 2611
MaeIII GTNAC 4 cut(s) 526, 565, 1040, 1046
MbiI CCGCTC 1 cut(s) 635
MflI RGATCY 7 cut(s) 106, 736, 1963, 2101, 2110, 2192, 2552
MlsI TGGCCA 2 cut(s) 163, 724
MluNI TGGCCA 2 cut(s) 163, 724
MlyI GAGTC 4 cut(s) 383, 965, 2639, 2645
MmeI TCCRAC 5 cut(s) 160, 602, 952, 1469, 2058
Mox20I TGGCCA 2 cut(s) 163, 724
Mph1103I ATGCAT 2 cut(s) 275, 2332
MroI TCCGGA 1 cut(s) 472
MscI TGGCCA 2 cut(s) 163, 724
MseI TTAA 9 cut(s) 57, 300, 692, 771, 852, 866, 1284, 1371, 2430
MslI CAYNNNNRTG 2 cut(s) 1022, 2153
Msp20I TGGCCA 2 cut(s) 163, 724
MspCI CTTAAG 1 cut(s) 56
MspI CCGG 3 cut(s) 473, 1487, 1549
MspR9I CCNGG 3 cut(s) 780, 2055, 2073
MvaI CCWGG 3 cut(s) 780, 2055, 2073
MwoI GCNNNNNNNGC 1 cut(s) 2204
NcoI CCATGG 1 cut(s) 2187
NdeI CATATG 1 cut(s) 1786
NlaIV GGNNCC 4 cut(s) 241, 1418, 1800, 2175
NmeAIII GCCGAG 1 cut(s) 2598
NmuCI GTSAC 2 cut(s) 1040, 1046
NsiI ATGCAT 2 cut(s) 275, 2332
NspI RCATGY 2 cut(s) 688, 2477
NspV TTCGAA 1 cut(s) 2465
PaeI GCATGC 1 cut(s) 688
PcsI WCGNNNNNNNCGW 2 cut(s) 997, 2608
PflFI GACNNNGTC 1 cut(s) 504
PflMI CCANNNNNTGG 1 cut(s) 1451
PfoI TCCNGGA 1 cut(s) 2053
PleI GAGTC 4 cut(s) 382, 964, 2639, 2645
PpsI GAGTC 4 cut(s) 382, 964, 2639, 2645
PpuMI RGGWCCY 1 cut(s) 394
PshBI ATTAAT 2 cut(s) 771, 852
PsiI TTATAA 1 cut(s) 434
Psp1406I AACGTT 1 cut(s) 2611
Psp5II RGGWCCY 1 cut(s) 394
Psp6I CCWGG 3 cut(s) 778, 2053, 2071
PspGI CCWGG 3 cut(s) 778, 2053, 2071
PspN4I GGNNCC 4 cut(s) 241, 1418, 1800, 2175
PspPI GGNCC 5 cut(s) 240, 394, 818, 1799, 2225
PspPPI RGGWCCY 1 cut(s) 394
PstNI CAGNNNCTG 1 cut(s) 2183
PsuI RGATCY 7 cut(s) 106, 736, 1963, 2101, 2110, 2192, 2552
PsyI GACNNNGTC 1 cut(s) 504
RsaI GTAC 3 cut(s) 600, 1432, 1842
RsaNI GTAC 3 cut(s) 599, 1431, 1841
RseI CAYNNNNRTG 2 cut(s) 1022, 2153
SalI GTCGAC 1 cut(s) 498
SaqAI TTAA 9 cut(s) 57, 300, 692, 771, 852, 866, 1284, 1371, 2430
Sau96I GGNCC 5 cut(s) 240, 394, 818, 1799, 2225
SchI GAGTC 4 cut(s) 383, 965, 2639, 2645
ScrFI CCNGG 3 cut(s) 780, 2055, 2073
SexAI ACCWGGT 1 cut(s) 778
SfcI CTRYAG 2 cut(s) 217, 740
SfuI TTCGAA 1 cut(s) 2465
SinI GGWCC 4 cut(s) 394, 818, 1799, 2225
SmiMI CAYNNNNRTG 2 cut(s) 1022, 2153
SmlI CTYRAG 2 cut(s) 56, 1192
SmoI CTYRAG 2 cut(s) 56, 1192
SphI GCATGC 1 cut(s) 688
SsiI CCGC 6 cut(s) 354, 635, 1411, 1796, 1932, 2126
SspI AATATT 2 cut(s) 574, 2304
SspMI CTAG 5 cut(s) 15, 1532, 2204, 2408, 2484
StyD4I CCNGG 3 cut(s) 778, 2053, 2071
StyI CCWWGG 3 cut(s) 951, 2187, 2268
TaaI ACNGT 8 cut(s) 488, 532, 651, 925, 1046, 1078, 2546, 2628
TaiI ACGT 2 cut(s) 1090, 2614
TaqI TCGA 3 cut(s) 499, 2369, 2465
TatI WGTACW 2 cut(s) 598, 1840
Tru1I TTAA 9 cut(s) 57, 300, 692, 771, 852, 866, 1284, 1371, 2430
Tru9I TTAA 9 cut(s) 57, 300, 692, 771, 852, 866, 1284, 1371, 2430
TscAI CASTG 7 cut(s) 928, 1024, 1051, 1666, 1672, 2428, 2551
TseFI GTSAC 2 cut(s) 1040, 1046
Tsp45I GTSAC 2 cut(s) 1040, 1046
TspGWI ACGGA 1 cut(s) 861
TspRI CASTG 7 cut(s) 928, 1024, 1051, 1666, 1672, 2428, 2551
Tth111I GACNNNGTC 1 cut(s) 504
Van91I CCANNNNNTGG 1 cut(s) 1451
Vha464I CTTAAG 1 cut(s) 56
VpaK11BI GGWCC 4 cut(s) 394, 818, 1799, 2225
VspI ATTAAT 2 cut(s) 771, 852
XapI RAATTY 6 cut(s) 358, 1565, 1720, 1804, 1987, 2500
XbaI TCTAGA 1 cut(s) 2483
XceI RCATGY 2 cut(s) 688, 2477
XmiI GTMKAC 1 cut(s) 499
XspI CTAG 5 cut(s) 15, 1532, 2204, 2408, 2484
Zsp2I ATGCAT 2 cut(s) 275, 2332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.