RLG00000035354

E3 SUMO-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0005389
Physical Location & Seq
Reverse (-)
65757300 .. 65769209
11910 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035354

Sequence Viewer

Length: 2742 bp
ATGGGTAAAAACGGAAGACCAAAAATACTCCTCTTAATTTTTTTTTTTTTGGTTTTTTGGTTCTGCGGCTCCGTCGTTCCCAATTGGTTCACATCGATCCCTGTGGAGGCTATGTGCTGTTGCAAGGAAAAGTTGGCATATTTTCGGATAAAAGAACTCAAGGATGTTCTCACTCAATTAGGTCTTTCAAAGCAGGGGAAGAAGCAGGATCTTGTTGAAAGGATATTGTCCATTCTTTCTGATGAGCAAGTTTCAAAATTGTGGCCAAAGAAGACTGCTGTTGGAAAGGAACAGGTGGCAGAACTTGTAGATGATACCTATAGAAAAATGCAGATATCTGGGGCTACAACTGATTTAGCATCAAAGGGACAATGCATCTCTGATTGTAGTAATGTGAAAGTTAAAGGTGAAATTGATGACCCCTTCCACTCAGATATAAAGGTTCGTTGTCTCTGCGGGAATTCATTAGAAACAGAGTCAATGATCAAGTGTGAGGACCTGAGATGTCGTGTTTGGCAACACATGGGTTGCGTTATAATTCCAGAGAAACCGATGGAAGGCAATCCACCAGTTCCGGAATTGTTTTACTGTGAACTATGTCGACTAAGTCGGGCTGACCCGTTTTGGGTTACTGTGCTGCATCCTTTACATCCCGTGAAGTTGAATGTTACTAATATTCCGACTGATGGCTCAAACCCTGTACAAAGTGTGGATAAAACATTTCAACTCACAAGAGCGGACAGGGACTTACTGTCTAAACAAGAATATGATGTTCAGGCTTGGTGCATGCTTTTAAATGACAAAGTTTCCTTCAGGATGCAGTGGCCACAATATGCGGATCTACAGGTCAATGGTATGCCTGTTCGTGCAATTAATAGACCTGGTTCGCAGCTTCTTGGAGCTAATGGTCGTGATGATGGTCCAATTATCACACCATACACGAGAGACGGAATTAATAAGATTTGCTTAACAGGATGTGATGCCCGTATTTTCTGCTTAGGGGTTCGTATTGTGAAGAGGCGCACTGTCCAACAGATTCTCAACCTGATTCCCAAGGAGTCTGATGGTGAGCGTTTTGAAGATGCTCTTGCTCGTGTTTGTCGTTGTGTTGGTGGTGGCACTGCAATGGATAATGCTGATAGTGACAGTGACTTGGAAGTCGTGGCAGATTCGTTTACCGTCAATCTACGTTGTCCTATGAGTGGTTCAAGGATGAAGGTTGCTGGTAGATTCAAACCTTGTCTTCACATGGGCTGTTTTGATCTTGATGTTTTTGTTGAACTAAATCAGCGCTCAAGGAAGTGGCAATGTCCAATTTGTCTAAAGAACTATGCGCTGGAGAATGTTATTATTGATCCTTATTTTAATCGTATAGCTTCCAAGATAAGGCATTGTGGAGAAGATGTTGCAGAGATTGAGGTGAAGCCTGATGGTTCTTGGCGAGTGAAGGTTAAAAGTGAAAGTGAACGCAGGGAACTTGGGGAACTTGGGCGGTGGCACCTTCCTGATAGTACGCTTAGCGTTCCAACAAATGGAGAAACTATCCCAAAATCTGAAGTGTTGAAGCCAGTCAAACAGGAAGGGGTTTCAGAAGGTCATACTGGTTTGAAACTAGGAATCAGAAAGAACCGGAATGGAGTTTGGGAAGTCAGCAGACCTGAAGAAATGAACACCTCTTCTGGTAATAAATTACAACAGCAGTTTGGAGAACATGAGCTAAAAGTTATCCCCATGAGTAGCAGTGCCACTGGGAGTGGTAGGGATGGTGAAGATGCAAGTGTAAATCAGGAGGGTGGCGGGAATTTTGATTTCTCTACAAACAATGGAATAGAGATGGATTCTTTTTCTCTGAATGTTGATTCAGCATATGGATTTGCGGGACCAAATTCTTCTGCACCAGTAGGAGATGCAGATGTTATTGTACTAAGTGATTCAGATGAAGACATAATGCCTTCTGAAACCGTTTATGGGACTAATTTTACTGATGCTGGTGGGATTGGTTTTCCCATGCCCGCTTCTGGAATTGCTGATTCTTATGGTGAAGATCCCGTGCTTGCTAATGGTGGAAATTCATGCTTGGGTCTTTTTAGTGGCAATGACGACGAATATATGTCCAACTGGTCATCATTACCTCCTGGAACTCATACTAACCCTGGATTCCAATTATTTAGTTCTGAGGCAGATCTACCAGATCCCCTGTGTCTCCCGCATGATTCTGTAAATTGTCCCACATCTATGAATGGATACACTTTGGCTCCAGAAACTGCTATGGGATCTGCTACTCTAGCCCATGAATCATCTGCTGGTCCTTTAGATGCTGACATGAACGATGGCTTAGTTGACAATCCCTTGGCTTTTGCTGGTGATGATCCCTCTCTTCAAATATTTCTTCCCACAAGACCATCAGATGCATCACTTCAATCCAATTTGAGAGATCGGGCTGATGTGTCGAATGGTGTTCATTCGGAGGATTGGATATCTCTTAGGCTAGGGGGTGATGCCAGTGGCATTAAGGGAGAATCTGGAACTCCAAATGGACAGATTTCGAAACGGCATGTGCCATCTAGAGAAGCTACAATGAATTCTTTGGCTGAAGCTTCTTTGCTTCTCGGTATGAATAATGACAGTGGCAGATCTGACAAGAGAAGTAGGCCGAGATCAAATAGTCCCTTTTCATTTCCTCGCCAAAAACGTTCTTCAAGACCACGGTTGTATCTTTCTATTGACTCTGACTCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0001101 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006935 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009267 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009553 GO:0009593 GO:0009605 GO:0009628 GO:0009653 GO:0009787 GO:0009791 GO:0009826 GO:0009856 GO:0009908 GO:0009909 GO:0009910 GO:0009966 GO:0009987 GO:0009991 GO:0010035 GO:0010112 GO:0010113 GO:0010183 GO:0010247 GO:0010286 GO:0010337 GO:0010565 GO:0010646 GO:0010817 GO:0016036 GO:0016043 GO:0016049 GO:0016740 GO:0016925 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0019787 GO:0019789 GO:0022414 GO:0023051 GO:0031323 GO:0031347 GO:0031348 GO:0031667 GO:0031668 GO:0031669 GO:0032101 GO:0032102 GO:0032350 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035670 GO:0036211 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044706 GO:0045088 GO:0045824 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050826 GO:0050896 GO:0050918 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051301 GO:0051606 GO:0051704 GO:0051716 GO:0060560 GO:0061458 GO:0061659 GO:0061665 GO:0062012 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0071840 GO:0080134 GO:0090352 GO:0090567 GO:0099402 GO:0140096 GO:1901419 GO:1901564 GO:1901700 GO:1903314 GO:1905957 GO:2000026 GO:2000070 GO:2000241 GO:2000242
KEGG Pathways
Metabolic & Signaling
ko04120 ko04630 ko05160 map04120 map04630 map05160
Pfam Domains
Protein Families
PHD SAP zf-MIZ

Protein Analysis

914

Amino Acids

100.21

Weight (kDa)

5.23

Isoelectric Point (pI)

39.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAP PF02037 48 - 76 1.1e-07 SAP domain
zf-MIZ PF02891 394 - 442 6.8e-19 MIZ/SP-RING zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 536
AasI GACNNNNNNGTC 1 cut(s) 1157
AccB1I GGYRCC 1 cut(s) 1497
AccB7I CCANNNNNTGG 1 cut(s) 1532
AccBSI CCGCTC 1 cut(s) 737
AccI GTMKAC 1 cut(s) 601
AccIII TCCGGA 1 cut(s) 574
AciI CCGC 9 cut(s) 66, 456, 737, 836, 1492, 1797, 1877, 2013, 2207
AclI AACGTT 1 cut(s) 2692
AclWI GGATC 8 cut(s) 91, 216, 846, 1349, 2039, 2186, 2281, 2363
AcoI YGGCCR 2 cut(s) 263, 824
AcsI RAATTY 5 cut(s) 460, 1801, 1885, 2068, 2581
AcuI CTGAAG 4 cut(s) 796, 1575, 1680, 2613
AfaI GTAC 3 cut(s) 702, 1513, 1923
AfeI AGCGCT 1 cut(s) 1292
AfiI CCNNNNNNNGG 9 cut(s) 106, 557, 625, 686, 1202, 1386, 1532, 1968, 2018
AhdI GACNNNNNGTC 1 cut(s) 751
AjnI CCWGG 3 cut(s) 880, 2134, 2152
AluBI AGCT 6 cut(s) 892, 902, 1376, 1717, 2573, 2597
AluI AGCT 6 cut(s) 892, 902, 1376, 1717, 2573, 2597
Alw26I GTCTC 3 cut(s) 455, 939, 2207
AlwI GGATC 8 cut(s) 91, 216, 846, 1349, 2039, 2186, 2281, 2363
AlwNI CAGNNNCTG 1 cut(s) 2264
Aor13HI TCCGGA 1 cut(s) 574
Aor51HI AGCGCT 1 cut(s) 1292
AoxI GGCC 3 cut(s) 263, 824, 2651
ApeKI GCWGC 2 cut(s) 637, 889
ApoI RAATTY 5 cut(s) 460, 1801, 1885, 2068, 2581
AseI ATTAAT 2 cut(s) 873, 954
AspLEI GCGC 3 cut(s) 1023, 1293, 1336
AspS9I GGNCC 4 cut(s) 496, 920, 1880, 2306
AsuHPI GGTGA 7 cut(s) 419, 1079, 1432, 1778, 2051, 2375, 2507
AsuII TTCGAA 1 cut(s) 2546
AvaII GGWCC 4 cut(s) 496, 920, 1880, 2306
BaeI ACNNNNGTAYC 2 cut(s) 2696, 2729
BalI TGGCCA 2 cut(s) 265, 826
BanI GGYRCC 1 cut(s) 1497
BauI CACGAG 2 cut(s) 940, 1092
BbsI GAAGAC 4 cut(s) 22, 278, 1235, 1947
BbvI GCAGC 2 cut(s) 624, 901
BceAI ACGGC 1 cut(s) 2567
BciT130I CCWGG 3 cut(s) 882, 2136, 2154
BciVI GTATCC 1 cut(s) 2237
BclI TGATCA 1 cut(s) 483
BcoDI GTCTC 3 cut(s) 455, 939, 2207
BfaI CTAG 4 cut(s) 1613, 2285, 2489, 2565
BfmI CTRYAG 2 cut(s) 319, 842
BfoI RGCGCY 1 cut(s) 1294
BfuI GTATCC 1 cut(s) 2237
BglII AGATCT 2 cut(s) 2182, 2633
BisI GCNGC 3 cut(s) 67, 638, 890
BlpI GCTNAGC 1 cut(s) 1517
BlsI GCNGC 3 cut(s) 68, 639, 891
Bme1390I CCNGG 3 cut(s) 882, 2136, 2154
Bme18I GGWCC 4 cut(s) 496, 920, 1880, 2306
BmeRI GACNNNNNGTC 1 cut(s) 751
BmgT120I GGNCC 4 cut(s) 496, 920, 1880, 2306
BmiI GGNNCC 4 cut(s) 70, 1499, 1881, 2256
BmrFI CCNGG 3 cut(s) 882, 2136, 2154
BmrI ACTGGG 1 cut(s) 1758
BmuI ACTGGG 1 cut(s) 1758
BpiI GAAGAC 4 cut(s) 22, 278, 1235, 1947
BpmI CTGGAG 2 cut(s) 1358, 2241
Bpu10I CCTNAGC 1 cut(s) 997
Bpu1102I GCTNAGC 1 cut(s) 1517
Bpu14I TTCGAA 1 cut(s) 2546
BpuEI CTTGAG 2 cut(s) 143, 1279
Bsa29I ATCGAT 1 cut(s) 95
BsaJI CCNNGG 4 cut(s) 1053, 2152, 2349, 2705
BsaWI WCCGGW 2 cut(s) 574, 1629
BsaXI ACNNNNNCTCC 6 cut(s) 98, 128, 1389, 1419, 2239, 2269
Bsc4I CCNNNNNNNGG 9 cut(s) 106, 557, 625, 686, 1202, 1386, 1532, 1968, 2018
Bse1I ACTGG 7 cut(s) 569, 1568, 1606, 1753, 1898, 2123, 2502
Bse3DI GCAATG 3 cut(s) 1131, 1313, 2101
BseAI TCCGGA 1 cut(s) 574
BseBI CCWGG 3 cut(s) 882, 2136, 2154
BseCI ATCGAT 1 cut(s) 95
BseDI CCNNGG 4 cut(s) 1053, 2152, 2349, 2705
BseGI GGATG 7 cut(s) 169, 640, 649, 822, 980, 1218, 1768
BseLI CCNNNNNNNGG 9 cut(s) 106, 557, 625, 686, 1202, 1386, 1532, 1968, 2018
BseMI GCAATG 3 cut(s) 1131, 1313, 2101
BseMII CTCAG 3 cut(s) 444, 491, 2166
BseNI ACTGG 7 cut(s) 569, 1568, 1606, 1753, 1898, 2123, 2502
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 2 cut(s) 624, 901
BsgI GTGCAG 1 cut(s) 1878
BshFI GGCC 3 cut(s) 265, 826, 2653
BshNI GGYRCC 1 cut(s) 1497
BshVI ATCGAT 1 cut(s) 95
BsiSI CCGG 2 cut(s) 575, 1630
BslFI GGGAC 6 cut(s) 381, 758, 1893, 1984, 2211, 2652
BslI CCNNNNNNNGG 9 cut(s) 106, 557, 625, 686, 1202, 1386, 1532, 1968, 2018
BsmAI GTCTC 3 cut(s) 455, 939, 2207
BsmBI CGTCTC 1 cut(s) 939
BsmFI GGGAC 6 cut(s) 381, 758, 1893, 1984, 2211, 2652
BsnI GGCC 3 cut(s) 265, 826, 2653
Bsp119I TTCGAA 1 cut(s) 2546
Bsp13I TCCGGA 1 cut(s) 574
Bsp1407I TGTACA 1 cut(s) 700
Bsp1720I GCTNAGC 1 cut(s) 1517
BspACI CCGC 9 cut(s) 66, 456, 737, 836, 1492, 1797, 1877, 2013, 2207
BspANI GGCC 3 cut(s) 265, 826, 2653
BspCNI CTCAG 3 cut(s) 443, 492, 2167
BspDI ATCGAT 1 cut(s) 95
BspEI TCCGGA 1 cut(s) 574
BspLI GGNNCC 4 cut(s) 70, 1499, 1881, 2256
BspPI GGATC 8 cut(s) 91, 216, 846, 1349, 2039, 2186, 2281, 2363
BspT104I TTCGAA 1 cut(s) 2546
BspT107I GGYRCC 1 cut(s) 1497
BsrBI CCGCTC 1 cut(s) 737
BsrDI GCAATG 3 cut(s) 1131, 1313, 2101
BsrGI TGTACA 1 cut(s) 700
BsrI ACTGG 7 cut(s) 569, 1568, 1606, 1753, 1898, 2123, 2502
BssECI CCNNGG 4 cut(s) 1053, 2152, 2349, 2705
BssSI CACGAG 2 cut(s) 940, 1092
BssT1I CCWWGG 2 cut(s) 1053, 2349
Bst2BI CACGAG 2 cut(s) 940, 1092
Bst2UI CCWGG 3 cut(s) 882, 2136, 2154
Bst4CI ACNGT 9 cut(s) 590, 634, 753, 1027, 1148, 1180, 1963, 2627, 2709
Bst6I CTCTTC 3 cut(s) 1010, 1681, 2382
BstAUI TGTACA 1 cut(s) 700
BstBI TTCGAA 1 cut(s) 2546
BstC8I GCNNGC 3 cut(s) 788, 2013, 2055
BstDEI CTNAG 9 cut(s) 430, 500, 605, 997, 1517, 1925, 2175, 2335, 2483
BstDSI CCRYGG 1 cut(s) 2705
BstF5I GGATG 7 cut(s) 169, 640, 649, 822, 980, 1218, 1768
BstH2I RGCGCY 1 cut(s) 1294
BstHHI GCGC 3 cut(s) 1023, 1293, 1336
BstMAI GTCTC 3 cut(s) 455, 939, 2207
BstMWI GCNNNNNNNGC 1 cut(s) 2285
BstNI CCWGG 3 cut(s) 882, 2136, 2154
BstNSI RCATGY 2 cut(s) 790, 2558
BstSCI CCNGG 3 cut(s) 880, 2134, 2152
BstSFI CTRYAG 2 cut(s) 319, 842
BstV1I GCAGC 2 cut(s) 624, 901
BstV2I GAAGAC 4 cut(s) 22, 278, 1235, 1947
BstX2I RGATCY 7 cut(s) 208, 838, 2044, 2182, 2191, 2273, 2633
BstYI RGATCY 7 cut(s) 208, 838, 2044, 2182, 2191, 2273, 2633
Bsu15I ATCGAT 1 cut(s) 95
BsuI GTATCC 1 cut(s) 2237
BsuRI GGCC 3 cut(s) 265, 826, 2653
BsuTUI ATCGAT 1 cut(s) 95
BtgI CCRYGG 1 cut(s) 2705
BtsCI GGATG 7 cut(s) 169, 640, 649, 822, 980, 1218, 1768
BtsI GCAGTG 3 cut(s) 827, 1119, 1747
BtsIMutI CAGTG 8 cut(s) 827, 1023, 1119, 1153, 1746, 1747, 2509, 2632
Cac8I GCNNGC 3 cut(s) 788, 2013, 2055
CaiI CAGNNNCTG 1 cut(s) 2264
CfoI GCGC 3 cut(s) 1023, 1293, 1336
Cfr13I GGNCC 4 cut(s) 496, 920, 1880, 2306
ClaI ATCGAT 1 cut(s) 95
CsiI ACCWGGT 1 cut(s) 880
Csp6I GTAC 3 cut(s) 701, 1512, 1922
CviQI GTAC 3 cut(s) 701, 1512, 1922
DdeI CTNAG 9 cut(s) 430, 500, 605, 997, 1517, 1925, 2175, 2335, 2483
DraI TTTAAA 1 cut(s) 795
DrdI GACNNNNNNGTC 1 cut(s) 1157
DriI GACNNNNNGTC 1 cut(s) 751
DseDI GACNNNNNNGTC 1 cut(s) 1157
EaeI YGGCCR 2 cut(s) 263, 824
Eam1104I CTCTTC 3 cut(s) 1010, 1681, 2382
Eam1105I GACNNNNNGTC 1 cut(s) 751
EarI CTCTTC 3 cut(s) 1010, 1681, 2382
Eco130I CCWWGG 2 cut(s) 1053, 2349
Eco32I GATATC 2 cut(s) 336, 2478
Eco47I GGWCC 4 cut(s) 496, 920, 1880, 2306
Eco47III AGCGCT 1 cut(s) 1292
Eco57I CTGAAG 4 cut(s) 796, 1575, 1680, 2613
EcoO109I RGGNCCY 1 cut(s) 496
EcoRI GAATTC 2 cut(s) 460, 2581
EcoRII CCWGG 3 cut(s) 880, 2134, 2152
EcoRV GATATC 2 cut(s) 336, 2478
EcoT14I CCWWGG 2 cut(s) 1053, 2349
EcoT22I ATGCAT 2 cut(s) 377, 2413
ErhI CCWWGG 2 cut(s) 1053, 2349
Esp3I CGTCTC 1 cut(s) 939
FalI AAGNNNNNCTT 4 cut(s) 950, 982, 1071, 1103
FaqI GGGAC 6 cut(s) 381, 758, 1893, 1984, 2211, 2652
FauI CCCGC 5 cut(s) 449, 1790, 1870, 2020, 2214
FauNDI CATATG 1 cut(s) 1867
FbaI TGATCA 1 cut(s) 483
FblI GTMKAC 1 cut(s) 601
Fnu4HI GCNGC 3 cut(s) 67, 638, 890
FokI GGATG 7 cut(s) 176, 627, 636, 829, 987, 1225, 1775
Fsp4HI GCNGC 3 cut(s) 67, 638, 890
FspBI CTAG 4 cut(s) 1613, 2285, 2489, 2565
GlaI GCGC 3 cut(s) 1022, 1292, 1335
GluI GCNGC 3 cut(s) 67, 638, 890
GsuI CTGGAG 2 cut(s) 1358, 2241
HaeII RGCGCY 1 cut(s) 1294
HaeIII GGCC 3 cut(s) 265, 826, 2653
HapII CCGG 2 cut(s) 575, 1630
HhaI GCGC 3 cut(s) 1023, 1293, 1336
Hin6I GCGC 3 cut(s) 1021, 1291, 1334
HinP1I GCGC 3 cut(s) 1021, 1291, 1334
HincII GTYRAC 2 cut(s) 602, 2341
HindII GTYRAC 2 cut(s) 602, 2341
HindIII AAGCTT 1 cut(s) 2595
HpaII CCGG 2 cut(s) 575, 1630
HphI GGTGA 7 cut(s) 419, 1079, 1432, 1778, 2051, 2375, 2507
Hpy166II GTNNAC 6 cut(s) 90, 593, 602, 1176, 1466, 2341
Hpy8I GTNNAC 6 cut(s) 90, 593, 602, 1176, 1466, 2341
Hpy99I CGWCG 2 cut(s) 77, 2105
HpyAV CCTTC 9 cut(s) 433, 551, 820, 1210, 1441, 1511, 1574, 1586, 1962
HpyCH4III ACNGT 9 cut(s) 590, 634, 753, 1027, 1148, 1180, 1963, 2627, 2709
HpyCH4IV ACGT 2 cut(s) 1189, 2692
HpyF10VI GCNNNNNNNGC 1 cut(s) 2285
HpyF3I CTNAG 9 cut(s) 430, 500, 605, 997, 1517, 1925, 2175, 2335, 2483
HpySE526I ACGT 2 cut(s) 1189, 2692
HspAI GCGC 3 cut(s) 1021, 1291, 1334
Kpn2I TCCGGA 1 cut(s) 574
Ksp22I TGATCA 1 cut(s) 483
LmnI GCTCC 3 cut(s) 74, 899, 2260
Lsp1109I GCAGC 2 cut(s) 624, 901
MabI ACCWGGT 1 cut(s) 880
MaeI CTAG 4 cut(s) 1613, 2285, 2489, 2565
MaeII ACGT 2 cut(s) 1189, 2692
MaeIII GTNAC 4 cut(s) 628, 667, 1142, 1148
MbiI CCGCTC 1 cut(s) 737
MfeI CAATTG 1 cut(s) 82
MflI RGATCY 7 cut(s) 208, 838, 2044, 2182, 2191, 2273, 2633
MlsI TGGCCA 2 cut(s) 265, 826
MluNI TGGCCA 2 cut(s) 265, 826
MlyI GAGTC 4 cut(s) 485, 1067, 2720, 2726
MmeI TCCRAC 5 cut(s) 262, 704, 1054, 1550, 2139
Mox20I TGGCCA 2 cut(s) 265, 826
Mph1103I ATGCAT 2 cut(s) 377, 2413
MroI TCCGGA 1 cut(s) 574
MscI TGGCCA 2 cut(s) 265, 826
MseI TTAA 9 cut(s) 35, 402, 794, 873, 954, 968, 1365, 1452, 2511
MslI CAYNNNNRTG 2 cut(s) 1124, 2234
Msp20I TGGCCA 2 cut(s) 265, 826
MspI CCGG 2 cut(s) 575, 1630
MspR9I CCNGG 3 cut(s) 882, 2136, 2154
MunI CAATTG 1 cut(s) 82
MvaI CCWGG 3 cut(s) 882, 2136, 2154
MwoI GCNNNNNNNGC 1 cut(s) 2285
NdeI CATATG 1 cut(s) 1867
NlaIV GGNNCC 4 cut(s) 70, 1499, 1881, 2256
NmeAIII GCCGAG 1 cut(s) 2679
NmuCI GTSAC 2 cut(s) 1142, 1148
NsiI ATGCAT 2 cut(s) 377, 2413
NspI RCATGY 2 cut(s) 790, 2558
NspV TTCGAA 1 cut(s) 2546
PaeI GCATGC 1 cut(s) 790
PcsI WCGNNNNNNNCGW 2 cut(s) 1099, 2689
PflFI GACNNNGTC 1 cut(s) 606
PflMI CCANNNNNTGG 1 cut(s) 1532
PfoI TCCNGGA 1 cut(s) 2134
PkrI GCNGC 3 cut(s) 68, 639, 891
PleI GAGTC 4 cut(s) 484, 1066, 2720, 2726
PpsI GAGTC 4 cut(s) 484, 1066, 2720, 2726
PpuMI RGGWCCY 1 cut(s) 496
PshBI ATTAAT 2 cut(s) 873, 954
PsiI TTATAA 1 cut(s) 536
Psp1406I AACGTT 1 cut(s) 2692
Psp5II RGGWCCY 1 cut(s) 496
Psp6I CCWGG 3 cut(s) 880, 2134, 2152
PspGI CCWGG 3 cut(s) 880, 2134, 2152
PspN4I GGNNCC 4 cut(s) 70, 1499, 1881, 2256
PspPI GGNCC 4 cut(s) 496, 920, 1880, 2306
PspPPI RGGWCCY 1 cut(s) 496
PstNI CAGNNNCTG 1 cut(s) 2264
PsuI RGATCY 7 cut(s) 208, 838, 2044, 2182, 2191, 2273, 2633
PsyI GACNNNGTC 1 cut(s) 606
RsaI GTAC 3 cut(s) 702, 1513, 1923
RsaNI GTAC 3 cut(s) 701, 1512, 1922
RseI CAYNNNNRTG 2 cut(s) 1124, 2234
SalI GTCGAC 1 cut(s) 600
SaqAI TTAA 9 cut(s) 35, 402, 794, 873, 954, 968, 1365, 1452, 2511
SatI GCNGC 3 cut(s) 67, 638, 890
Sau96I GGNCC 4 cut(s) 496, 920, 1880, 2306
SchI GAGTC 4 cut(s) 485, 1067, 2720, 2726
ScrFI CCNGG 3 cut(s) 882, 2136, 2154
SexAI ACCWGGT 1 cut(s) 880
SfcI CTRYAG 2 cut(s) 319, 842
SfuI TTCGAA 1 cut(s) 2546
SinI GGWCC 4 cut(s) 496, 920, 1880, 2306
SmiMI CAYNNNNRTG 2 cut(s) 1124, 2234
SmlI CTYRAG 2 cut(s) 158, 1294
SmoI CTYRAG 2 cut(s) 158, 1294
SphI GCATGC 1 cut(s) 790
SsiI CCGC 9 cut(s) 66, 456, 737, 836, 1492, 1797, 1877, 2013, 2207
SspI AATATT 2 cut(s) 676, 2385
SspMI CTAG 4 cut(s) 1613, 2285, 2489, 2565
StyD4I CCNGG 3 cut(s) 880, 2134, 2152
StyI CCWWGG 2 cut(s) 1053, 2349
TaaI ACNGT 9 cut(s) 590, 634, 753, 1027, 1148, 1180, 1963, 2627, 2709
TaiI ACGT 2 cut(s) 1192, 2695
TaqI TCGA 4 cut(s) 95, 601, 2450, 2546
TatI WGTACW 2 cut(s) 700, 1921
TauI GCSGC 1 cut(s) 69
Tru1I TTAA 9 cut(s) 35, 402, 794, 873, 954, 968, 1365, 1452, 2511
Tru9I TTAA 9 cut(s) 35, 402, 794, 873, 954, 968, 1365, 1452, 2511
TscAI CASTG 8 cut(s) 827, 1030, 1126, 1153, 1747, 1753, 2509, 2632
TseFI GTSAC 2 cut(s) 1142, 1148
TseI GCWGC 2 cut(s) 637, 889
Tsp45I GTSAC 2 cut(s) 1142, 1148
TspGWI ACGGA 3 cut(s) 27, 61, 963
TspRI CASTG 8 cut(s) 827, 1030, 1126, 1153, 1747, 1753, 2509, 2632
Tth111I GACNNNGTC 1 cut(s) 606
Van91I CCANNNNNTGG 1 cut(s) 1532
VpaK11BI GGWCC 4 cut(s) 496, 920, 1880, 2306
VspI ATTAAT 2 cut(s) 873, 954
XapI RAATTY 5 cut(s) 460, 1801, 1885, 2068, 2581
XbaI TCTAGA 1 cut(s) 2564
XceI RCATGY 2 cut(s) 790, 2558
XmiI GTMKAC 1 cut(s) 601
XspI CTAG 4 cut(s) 1613, 2285, 2489, 2565
Zsp2I ATGCAT 2 cut(s) 377, 2413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.