Rh5BG405900

E3 SUMO-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0005389
Physical Location & Seq
Reverse (-)
65824645 .. 65836774
12130 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG405900.1

Sequence Viewer

Length: 2541 bp
ATGCAGGATCTTGTTGAAAGGATATTGTCCATTCTTTCTGATGAGCAAGTTTCAAAATTGTGGCCAAAGAAGACTGCTGTTGGAAAGGAACAGGTGGCAGAACTTGTAGATGATACCTATAGAAAAATGCAGATATCTGGGGCCACAACTGATTTAGCATCAAAGGGACAATGCATCTCTGATTGCAGTAATGTGAAAGTTAAAGGTGAAATTGATGACCACTTCCACTCAGATATAAAGGTTCGTTGTCTCTGCGGGAATTCATTAGAAACAGAGTCAATGATCAAGTGTGAGGACCTGAGATGTCGTGTTTGGCAACACATGGGTTGCGTTATAATTCCAGAGAAACCGATGGAAGGCAATCCACCAGTTCCGGAATTGTTTTACTGTGAACTATGTCGACTAAGTCGGGCTGACCCGTTTTGGGTTACTGTGCTACATCCTTTACATCCCGTGAAGTTGAATGTTACTAATATTCCGACTGATGGCTCAAACCCTGTACAAAGTGTGGATAAAACATTTCAACTCACAAGAGCGGACAGGGACTTACTGTCTAAACAAGAATATGATGTTCAGGCTTGGTGCATGCTTTTAAATGACAAAGTTTCCTTCAGGATGCAATGGCCACAATATGCAGATCTACAGGTCAATGGTATGCCTGTTCGTGCAATTAATAGACCTGGTTCGCAACTTCTTGGAGCTAATGGTCGTGATGATGGTCCAATTATCACACCATACACGAGAGACGGAATTAATAAGATTTGCTTAACAGGATGTGATGCCCGTATTTTCTGCTTAGGGGTTCGTATTGTGAAGAGGCGCACTGTCCAACAGATTCTCAACCTGATTCCCAAGGAGTCTGATGGTGAGCGTTTTGAAGATGCTCTTGCTCGTGTTTGTCGTTGTGTGGGTGGTGGCACTGCAATGGATAATGCTGATAGTGACAGTGACTTGGAAGTCGTGGCAGATTCGTTTACCGTCAACCTACGTTGTCCTATGAGTGGTTCAAGGATGAAGGTTGCTGGTAGATTCAAACCTTGTCTTCACATGGGCTGTTTTGATCTTGATGTTTTTGTTGAACTAAATCAGCGCTCAAGGAAGTGGCAATGTCCAATTTGTCTAAAGAACTATGCGCTGGAGAATGTTATTATTGATCCTTATTTTAATCGTATAGCTTCCAAGATGAGGCATTGTGGAGAAGATGTTGCAGAGATTGAGGTGAAGCCTGATGGTTCTTGGCGAGTGAAGGTTAAAAGTGAAAGTGAACGCAGGGAACTTGGGGAACTTGGGCGGTGGCACCTTCCTGATAGTACGCTTTGCGTTCCAACACATGGAGAAACTATCCCAAAATCTGAAGTGTTGAAGCCGGTCAAACAGGAAGGGGTTTCAGAAGGTCATACTGGTTTGAAACTAGGAATCAGAAAGAACCGGAATGGTGTTTGGGAATTCAGCAGACCTGAAGAAATGAACACCTCTTCTGGTAATAAATTACAACAGCAGTTTGGAGAACATGAGCTAAAAGTTATCCCCATGAGTAGCAGTGCCACTGGGAGTGGTAGGGATGGTGAAGATGCAAGTGTAAATCAGGAGGGTGGTGGGAATTTTGATTTCTCTACAAACAATGGAATAGAGATGGATTCTTTTTCTCTGAATGTTGATTCAGCATATGGATTTGCGGGACCAAATTCTTCTGCACCAGTAGGAGATGCTGATGTTATTGTACTAAGTGATTCAGATGAAGAAATAATGCCTTCTGAAACCATTTATGGGACTAATTTTACTGATGCTGGTGGGATTGGTTTTCCCATGCCCGCTTCTGGAATTGCTGATTCTTATGGTGAAGATCCCGTGCTTGCTAATGGTGGAAATTCATGCTTGGGTCTTTTTAGTGGCAATGATGATGAATATATGTCCAACTGGTCATCATTACCTCCTGGAACTCATACTAACCCTGGATTCCAATTATTTAGTTCTGAGGCAGATCTACCAGATCCCCTGTGTCTCCCGCAGGATTCTGTAAATTGTTCCACATCTATGAATGGATACACTTTGGCTCCAGAAACTGCCATGGGATCTGCTACTCTAGCCCATGAATCATCTGTTGGTCCTTTAGATGCTGACATGAACGATGGCTTAGTTGACAATCCCTTGGCTTTTGCTGGTGATGATCCCTCTCTTCAAATATTTCTTCCCACAAGACCATCAGATGCATCACTTCAATCCAATTTGAGAGATCGGGCTGATGTGTCGAATGGTGTTCAATCGGAGGATTGGATATCTCTTAGGCTAGGGGGTGATGCCAGTGGCATTAAAGGAGAATCTGGAACTCCAAATGGACAGATTTCGAAACGGCATGTGCCATCTAGAGAAGCTACAATGAATTCTTTGGCTGAAGCTTCTTTGCTTCTCGGTATGAATAATGACAGTGGCAGATCTGACAAGAGAAGTAGGCCGAGATCAAATAGTCCCTTTTCATTTCCTCGCCAAAAACGTTCTTCAAGAACACGGTTGTTTCTTTCTATTGACTCTGACTCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0001101 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006935 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009267 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009553 GO:0009593 GO:0009605 GO:0009628 GO:0009653 GO:0009787 GO:0009791 GO:0009826 GO:0009856 GO:0009908 GO:0009909 GO:0009910 GO:0009966 GO:0009987 GO:0009991 GO:0010035 GO:0010112 GO:0010113 GO:0010183 GO:0010247 GO:0010286 GO:0010337 GO:0010565 GO:0010646 GO:0010817 GO:0016036 GO:0016043 GO:0016049 GO:0016740 GO:0016925 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0019787 GO:0019789 GO:0022414 GO:0023051 GO:0031323 GO:0031347 GO:0031348 GO:0031667 GO:0031668 GO:0031669 GO:0032101 GO:0032102 GO:0032350 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035670 GO:0036211 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044706 GO:0045088 GO:0045824 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050826 GO:0050896 GO:0050918 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051301 GO:0051606 GO:0051704 GO:0051716 GO:0060560 GO:0061458 GO:0061659 GO:0061665 GO:0062012 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0071840 GO:0080134 GO:0090352 GO:0090567 GO:0099402 GO:0140096 GO:1901419 GO:1901564 GO:1901700 GO:1903314 GO:1905957 GO:2000026 GO:2000070 GO:2000241 GO:2000242
KEGG Pathways
Metabolic & Signaling
ko04120 ko04630 ko05160 map04120 map04630 map05160
Pfam Domains
Protein Families
PHD SAP zf-MIZ

Protein Analysis

846

Amino Acids

92.66

Weight (kDa)

5.0

Isoelectric Point (pI)

42.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-MIZ PF02891 327 - 375 6.2e-19 MIZ/SP-RING zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 335
AasI GACNNNNNNGTC 1 cut(s) 956
AccB1I GGYRCC 1 cut(s) 1296
AccB7I CCANNNNNTGG 1 cut(s) 1331
AccBSI CCGCTC 1 cut(s) 536
AccI GTMKAC 1 cut(s) 400
AccIII TCCGGA 1 cut(s) 373
AciI CCGC 6 cut(s) 255, 536, 1291, 1676, 1812, 2006
AclI AACGTT 1 cut(s) 2491
AclWI GGATC 6 cut(s) 15, 1148, 1838, 1985, 2080, 2162
AcoI YGGCCR 2 cut(s) 62, 623
AcsI RAATTY 6 cut(s) 259, 1445, 1600, 1684, 1867, 2380
AcuI CTGAAG 4 cut(s) 595, 1374, 1479, 2412
AfaI GTAC 3 cut(s) 501, 1312, 1722
AfeI AGCGCT 1 cut(s) 1091
AfiI CCNNNNNNNGG 8 cut(s) 356, 424, 485, 1001, 1185, 1331, 1767, 1817
AhdI GACNNNNNGTC 1 cut(s) 550
AjnI CCWGG 3 cut(s) 679, 1933, 1951
AjuI GAANNNNNNNTTGG 2 cut(s) 2085, 2117
AluBI AGCT 5 cut(s) 701, 1175, 1516, 2372, 2396
AluI AGCT 5 cut(s) 701, 1175, 1516, 2372, 2396
Alw26I GTCTC 3 cut(s) 254, 738, 2006
AlwI GGATC 6 cut(s) 15, 1148, 1838, 1985, 2080, 2162
AlwNI CAGNNNCTG 1 cut(s) 2063
Aor13HI TCCGGA 1 cut(s) 373
Aor51HI AGCGCT 1 cut(s) 1091
AoxI GGCC 4 cut(s) 62, 141, 623, 2450
ApoI RAATTY 6 cut(s) 259, 1445, 1600, 1684, 1867, 2380
AseI ATTAAT 2 cut(s) 672, 753
AspLEI GCGC 3 cut(s) 822, 1092, 1135
AspS9I GGNCC 5 cut(s) 141, 295, 719, 1679, 2105
AsuHPI GGTGA 7 cut(s) 218, 878, 1231, 1577, 1850, 2174, 2306
AsuII TTCGAA 1 cut(s) 2345
AvaII GGWCC 4 cut(s) 295, 719, 1679, 2105
BalI TGGCCA 2 cut(s) 64, 625
BanI GGYRCC 1 cut(s) 1296
BauI CACGAG 2 cut(s) 739, 891
BbsI GAAGAC 2 cut(s) 77, 1034
BceAI ACGGC 1 cut(s) 2366
BciT130I CCWGG 3 cut(s) 681, 1935, 1953
BciVI GTATCC 1 cut(s) 2036
BclI TGATCA 1 cut(s) 282
BcoDI GTCTC 3 cut(s) 254, 738, 2006
BfaI CTAG 4 cut(s) 1412, 2084, 2288, 2364
BfmI CTRYAG 2 cut(s) 118, 641
BfoI RGCGCY 1 cut(s) 1093
BfuI GTATCC 1 cut(s) 2036
BglII AGATCT 3 cut(s) 637, 1981, 2432
Bme1390I CCNGG 3 cut(s) 681, 1935, 1953
Bme18I GGWCC 4 cut(s) 295, 719, 1679, 2105
BmeRI GACNNNNNGTC 1 cut(s) 550
BmgT120I GGNCC 5 cut(s) 141, 295, 719, 1679, 2105
BmiI GGNNCC 4 cut(s) 142, 1298, 1680, 2055
BmrFI CCNGG 3 cut(s) 681, 1935, 1953
BmrI ACTGGG 1 cut(s) 1557
BmuI ACTGGG 1 cut(s) 1557
BpiI GAAGAC 2 cut(s) 77, 1034
BpmI CTGGAG 2 cut(s) 1157, 2040
Bpu10I CCTNAGC 1 cut(s) 796
Bpu14I TTCGAA 1 cut(s) 2345
BpuEI CTTGAG 1 cut(s) 1078
BsaJI CCNNGG 4 cut(s) 852, 1951, 2067, 2148
BsaWI WCCGGW 2 cut(s) 373, 1428
BsaXI ACNNNNNCTCC 4 cut(s) 1188, 1218, 2038, 2068
Bsc4I CCNNNNNNNGG 8 cut(s) 356, 424, 485, 1001, 1185, 1331, 1767, 1817
Bse118I RCCGGY 1 cut(s) 1366
Bse1I ACTGG 6 cut(s) 368, 1405, 1552, 1697, 1922, 2301
Bse3DI GCAATG 4 cut(s) 626, 930, 1112, 1900
BseAI TCCGGA 1 cut(s) 373
BseBI CCWGG 3 cut(s) 681, 1935, 1953
BseDI CCNNGG 4 cut(s) 852, 1951, 2067, 2148
BseGI GGATG 6 cut(s) 439, 448, 621, 779, 1017, 1567
BseLI CCNNNNNNNGG 8 cut(s) 356, 424, 485, 1001, 1185, 1331, 1767, 1817
BseMI GCAATG 4 cut(s) 626, 930, 1112, 1900
BseMII CTCAG 3 cut(s) 243, 290, 1965
BseNI ACTGG 6 cut(s) 368, 1405, 1552, 1697, 1922, 2301
BsgI GTGCAG 1 cut(s) 1677
BshFI GGCC 4 cut(s) 64, 143, 625, 2452
BshNI GGYRCC 1 cut(s) 1296
BsiSI CCGG 3 cut(s) 374, 1367, 1429
BslFI GGGAC 5 cut(s) 180, 557, 1692, 1783, 2451
BslI CCNNNNNNNGG 8 cut(s) 356, 424, 485, 1001, 1185, 1331, 1767, 1817
BsmAI GTCTC 3 cut(s) 254, 738, 2006
BsmBI CGTCTC 1 cut(s) 738
BsmFI GGGAC 5 cut(s) 180, 557, 1692, 1783, 2451
BsnI GGCC 4 cut(s) 64, 143, 625, 2452
Bsp119I TTCGAA 1 cut(s) 2345
Bsp13I TCCGGA 1 cut(s) 373
Bsp1407I TGTACA 1 cut(s) 499
Bsp19I CCATGG 1 cut(s) 2067
BspACI CCGC 6 cut(s) 255, 536, 1291, 1676, 1812, 2006
BspANI GGCC 4 cut(s) 64, 143, 625, 2452
BspCNI CTCAG 3 cut(s) 242, 291, 1966
BspEI TCCGGA 1 cut(s) 373
BspLI GGNNCC 4 cut(s) 142, 1298, 1680, 2055
BspPI GGATC 6 cut(s) 15, 1148, 1838, 1985, 2080, 2162
BspT104I TTCGAA 1 cut(s) 2345
BspT107I GGYRCC 1 cut(s) 1296
BsrBI CCGCTC 1 cut(s) 536
BsrDI GCAATG 4 cut(s) 626, 930, 1112, 1900
BsrFI RCCGGY 1 cut(s) 1366
BsrGI TGTACA 1 cut(s) 499
BsrI ACTGG 6 cut(s) 368, 1405, 1552, 1697, 1922, 2301
BssAI RCCGGY 1 cut(s) 1366
BssECI CCNNGG 4 cut(s) 852, 1951, 2067, 2148
BssSI CACGAG 2 cut(s) 739, 891
BssT1I CCWWGG 3 cut(s) 852, 2067, 2148
Bst2BI CACGAG 2 cut(s) 739, 891
Bst2UI CCWGG 3 cut(s) 681, 1935, 1953
Bst4CI ACNGT 8 cut(s) 389, 433, 552, 826, 947, 979, 2426, 2508
Bst6I CTCTTC 3 cut(s) 809, 1480, 2181
BstAUI TGTACA 1 cut(s) 499
BstBI TTCGAA 1 cut(s) 2345
BstC8I GCNNGC 3 cut(s) 587, 1812, 1854
BstDEI CTNAG 8 cut(s) 229, 299, 404, 796, 1724, 1974, 2134, 2282
BstDSI CCRYGG 1 cut(s) 2067
BstF5I GGATG 6 cut(s) 439, 448, 621, 779, 1017, 1567
BstH2I RGCGCY 1 cut(s) 1093
BstHHI GCGC 3 cut(s) 822, 1092, 1135
BstMAI GTCTC 3 cut(s) 254, 738, 2006
BstMWI GCNNNNNNNGC 1 cut(s) 2084
BstNI CCWGG 3 cut(s) 681, 1935, 1953
BstNSI RCATGY 2 cut(s) 589, 2357
BstSCI CCNGG 3 cut(s) 679, 1933, 1951
BstSFI CTRYAG 2 cut(s) 118, 641
BstV2I GAAGAC 2 cut(s) 77, 1034
BstX2I RGATCY 7 cut(s) 7, 637, 1843, 1981, 1990, 2072, 2432
BstYI RGATCY 7 cut(s) 7, 637, 1843, 1981, 1990, 2072, 2432
BsuI GTATCC 1 cut(s) 2036
BsuRI GGCC 4 cut(s) 64, 143, 625, 2452
BtgI CCRYGG 1 cut(s) 2067
BtsCI GGATG 6 cut(s) 439, 448, 621, 779, 1017, 1567
BtsI GCAGTG 2 cut(s) 918, 1546
BtsIMutI CAGTG 7 cut(s) 822, 918, 952, 1545, 1546, 2308, 2431
Cac8I GCNNGC 3 cut(s) 587, 1812, 1854
CaiI CAGNNNCTG 1 cut(s) 2063
CfoI GCGC 3 cut(s) 822, 1092, 1135
Cfr10I RCCGGY 1 cut(s) 1366
Cfr13I GGNCC 5 cut(s) 141, 295, 719, 1679, 2105
CsiI ACCWGGT 1 cut(s) 679
Csp6I GTAC 3 cut(s) 500, 1311, 1721
CviQI GTAC 3 cut(s) 500, 1311, 1721
DdeI CTNAG 8 cut(s) 229, 299, 404, 796, 1724, 1974, 2134, 2282
DraI TTTAAA 1 cut(s) 594
DrdI GACNNNNNNGTC 1 cut(s) 956
DriI GACNNNNNGTC 1 cut(s) 550
DseDI GACNNNNNNGTC 1 cut(s) 956
EaeI YGGCCR 2 cut(s) 62, 623
Eam1104I CTCTTC 3 cut(s) 809, 1480, 2181
Eam1105I GACNNNNNGTC 1 cut(s) 550
EarI CTCTTC 3 cut(s) 809, 1480, 2181
Eco130I CCWWGG 3 cut(s) 852, 2067, 2148
Eco32I GATATC 2 cut(s) 135, 2277
Eco47I GGWCC 4 cut(s) 295, 719, 1679, 2105
Eco47III AGCGCT 1 cut(s) 1091
Eco57I CTGAAG 4 cut(s) 595, 1374, 1479, 2412
EcoO109I RGGNCCY 1 cut(s) 295
EcoRI GAATTC 3 cut(s) 259, 1445, 2380
EcoRII CCWGG 3 cut(s) 679, 1933, 1951
EcoRV GATATC 2 cut(s) 135, 2277
EcoT14I CCWWGG 3 cut(s) 852, 2067, 2148
EcoT22I ATGCAT 2 cut(s) 176, 2212
ErhI CCWWGG 3 cut(s) 852, 2067, 2148
Esp3I CGTCTC 1 cut(s) 738
FalI AAGNNNNNCTT 4 cut(s) 749, 781, 870, 902
FaqI GGGAC 5 cut(s) 180, 557, 1692, 1783, 2451
FauI CCCGC 4 cut(s) 248, 1669, 1819, 2013
FauNDI CATATG 1 cut(s) 1666
FbaI TGATCA 1 cut(s) 282
FblI GTMKAC 1 cut(s) 400
FokI GGATG 6 cut(s) 426, 435, 628, 786, 1024, 1574
FspBI CTAG 4 cut(s) 1412, 2084, 2288, 2364
GlaI GCGC 3 cut(s) 821, 1091, 1134
GsuI CTGGAG 2 cut(s) 1157, 2040
HaeII RGCGCY 1 cut(s) 1093
HaeIII GGCC 4 cut(s) 64, 143, 625, 2452
HapII CCGG 3 cut(s) 374, 1367, 1429
HhaI GCGC 3 cut(s) 822, 1092, 1135
Hin6I GCGC 3 cut(s) 820, 1090, 1133
HinP1I GCGC 3 cut(s) 820, 1090, 1133
HincII GTYRAC 3 cut(s) 401, 982, 2140
HindII GTYRAC 3 cut(s) 401, 982, 2140
HindIII AAGCTT 1 cut(s) 2394
HpaII CCGG 3 cut(s) 374, 1367, 1429
HphI GGTGA 7 cut(s) 218, 878, 1231, 1577, 1850, 2174, 2306
Hpy166II GTNNAC 6 cut(s) 392, 401, 975, 982, 1265, 2140
Hpy8I GTNNAC 6 cut(s) 392, 401, 975, 982, 1265, 2140
HpyAV CCTTC 8 cut(s) 350, 619, 1009, 1240, 1310, 1373, 1385, 1761
HpyCH4III ACNGT 8 cut(s) 389, 433, 552, 826, 947, 979, 2426, 2508
HpyCH4IV ACGT 2 cut(s) 988, 2491
HpyF10VI GCNNNNNNNGC 1 cut(s) 2084
HpyF3I CTNAG 8 cut(s) 229, 299, 404, 796, 1724, 1974, 2134, 2282
HpySE526I ACGT 2 cut(s) 988, 2491
HspAI GCGC 3 cut(s) 820, 1090, 1133
Kpn2I TCCGGA 1 cut(s) 373
Ksp22I TGATCA 1 cut(s) 282
LmnI GCTCC 2 cut(s) 698, 2059
MabI ACCWGGT 1 cut(s) 679
MaeI CTAG 4 cut(s) 1412, 2084, 2288, 2364
MaeII ACGT 2 cut(s) 988, 2491
MaeIII GTNAC 4 cut(s) 427, 466, 941, 947
MbiI CCGCTC 1 cut(s) 536
MflI RGATCY 7 cut(s) 7, 637, 1843, 1981, 1990, 2072, 2432
MlsI TGGCCA 2 cut(s) 64, 625
MluNI TGGCCA 2 cut(s) 64, 625
MlyI GAGTC 4 cut(s) 284, 866, 2519, 2525
MmeI TCCRAC 5 cut(s) 61, 503, 853, 1349, 1938
Mox20I TGGCCA 2 cut(s) 64, 625
Mph1103I ATGCAT 2 cut(s) 176, 2212
MroI TCCGGA 1 cut(s) 373
MscI TGGCCA 2 cut(s) 64, 625
MseI TTAA 8 cut(s) 201, 593, 672, 753, 767, 1164, 1251, 2310
MslI CAYNNNNRTG 2 cut(s) 923, 2033
Msp20I TGGCCA 2 cut(s) 64, 625
MspI CCGG 3 cut(s) 374, 1367, 1429
MspR9I CCNGG 3 cut(s) 681, 1935, 1953
MvaI CCWGG 3 cut(s) 681, 1935, 1953
MwoI GCNNNNNNNGC 1 cut(s) 2084
NcoI CCATGG 1 cut(s) 2067
NdeI CATATG 1 cut(s) 1666
NlaIV GGNNCC 4 cut(s) 142, 1298, 1680, 2055
NmeAIII GCCGAG 1 cut(s) 2478
NmuCI GTSAC 2 cut(s) 941, 947
NsiI ATGCAT 2 cut(s) 176, 2212
NspI RCATGY 2 cut(s) 589, 2357
NspV TTCGAA 1 cut(s) 2345
PaeI GCATGC 1 cut(s) 589
PcsI WCGNNNNNNNCGW 2 cut(s) 898, 2488
PflFI GACNNNGTC 1 cut(s) 405
PflMI CCANNNNNTGG 1 cut(s) 1331
PfoI TCCNGGA 1 cut(s) 1933
PleI GAGTC 4 cut(s) 283, 865, 2519, 2525
PpsI GAGTC 4 cut(s) 283, 865, 2519, 2525
PpuMI RGGWCCY 1 cut(s) 295
PshBI ATTAAT 2 cut(s) 672, 753
PsiI TTATAA 1 cut(s) 335
Psp1406I AACGTT 1 cut(s) 2491
Psp5II RGGWCCY 1 cut(s) 295
Psp6I CCWGG 3 cut(s) 679, 1933, 1951
PspGI CCWGG 3 cut(s) 679, 1933, 1951
PspN4I GGNNCC 4 cut(s) 142, 1298, 1680, 2055
PspPI GGNCC 5 cut(s) 141, 295, 719, 1679, 2105
PspPPI RGGWCCY 1 cut(s) 295
PstNI CAGNNNCTG 1 cut(s) 2063
PsuI RGATCY 7 cut(s) 7, 637, 1843, 1981, 1990, 2072, 2432
PsyI GACNNNGTC 1 cut(s) 405
RsaI GTAC 3 cut(s) 501, 1312, 1722
RsaNI GTAC 3 cut(s) 500, 1311, 1721
RseI CAYNNNNRTG 2 cut(s) 923, 2033
SalI GTCGAC 1 cut(s) 399
SaqAI TTAA 8 cut(s) 201, 593, 672, 753, 767, 1164, 1251, 2310
Sau96I GGNCC 5 cut(s) 141, 295, 719, 1679, 2105
SchI GAGTC 4 cut(s) 284, 866, 2519, 2525
ScrFI CCNGG 3 cut(s) 681, 1935, 1953
SexAI ACCWGGT 1 cut(s) 679
SfcI CTRYAG 2 cut(s) 118, 641
SfuI TTCGAA 1 cut(s) 2345
SinI GGWCC 4 cut(s) 295, 719, 1679, 2105
SmiMI CAYNNNNRTG 2 cut(s) 923, 2033
SmlI CTYRAG 1 cut(s) 1093
SmoI CTYRAG 1 cut(s) 1093
SphI GCATGC 1 cut(s) 589
SsiI CCGC 6 cut(s) 255, 536, 1291, 1676, 1812, 2006
SspI AATATT 2 cut(s) 475, 2184
SspMI CTAG 4 cut(s) 1412, 2084, 2288, 2364
StyD4I CCNGG 3 cut(s) 679, 1933, 1951
StyI CCWWGG 3 cut(s) 852, 2067, 2148
TaaI ACNGT 8 cut(s) 389, 433, 552, 826, 947, 979, 2426, 2508
TaiI ACGT 2 cut(s) 991, 2494
TaqI TCGA 3 cut(s) 400, 2249, 2345
TatI WGTACW 2 cut(s) 499, 1720
Tru1I TTAA 8 cut(s) 201, 593, 672, 753, 767, 1164, 1251, 2310
Tru9I TTAA 8 cut(s) 201, 593, 672, 753, 767, 1164, 1251, 2310
TscAI CASTG 7 cut(s) 829, 925, 952, 1546, 1552, 2308, 2431
TseFI GTSAC 2 cut(s) 941, 947
Tsp45I GTSAC 2 cut(s) 941, 947
TspGWI ACGGA 1 cut(s) 762
TspRI CASTG 7 cut(s) 829, 925, 952, 1546, 1552, 2308, 2431
Tth111I GACNNNGTC 1 cut(s) 405
Van91I CCANNNNNTGG 1 cut(s) 1331
VpaK11BI GGWCC 4 cut(s) 295, 719, 1679, 2105
VspI ATTAAT 2 cut(s) 672, 753
XapI RAATTY 6 cut(s) 259, 1445, 1600, 1684, 1867, 2380
XbaI TCTAGA 1 cut(s) 2363
XceI RCATGY 2 cut(s) 589, 2357
XmiI GTMKAC 1 cut(s) 400
XspI CTAG 4 cut(s) 1412, 2084, 2288, 2364
Zsp2I ATGCAT 2 cut(s) 176, 2212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.