FvH4_3g32990

E3 SUMO-protein ligase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
28349500 .. 28361097
11598 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g32990.t2

Sequence Viewer

Length: 2520 bp
ATGGATTTGGTAGCTAGTTGCAAGGAAAAGTTGGCATATTTTCGGATAAAAGAGCTCAAGGATGTTCTCACCCAATTAGGTCTGTCAAAGCAGGGGAAGAAGCAGGATCTTGTTGACCGGATATTGTCCCTTCTTTCTGATGAGCAAGTTTCAAAATTGTGGCCAAAGAAGACTGCTGTTGGAAAGGTACAGGTCGCAGAACTTGTAGATGACACCTATAGAAAAATGCAAATATCTGGGGCTACCACTGATTTAGCATCGAAGGGCCAGTGCATCTCTGATAGTAGCAATGTGAAAGTTAAAGGTGAAATTGATGATCCCTTCCACTCAGATATGAAGGTTCGTTGTCTCTGCGGGAGTTCATTAGAAACAGAGTCAATGATCAAGTGTGAGGATCTGAGGTGTCAAGTGTGGCAACACATCGGTTGTGTTATAATTCCAGAGAAGCCGATGGAAGGCAATCCACCAGTTCCTGAATTATTTTATTGTGAACTCTGTCGACTAAGTCGAGCTGACCCGTTTTGGGTAACTGTGCTTCATCCTTTACATCCTGTGAAGTTGAATGTTACTAATATTCCAACTGATGGCTCAAACCCTGTACAAAGTGTGGATAAAACGTTTCAACTCACAAGAGCAGACAGGGACTTGCTGTCTAAACCAGAATATGATGTTCAGGCTTGGTGCATGCTGTTAAATGACAAAGTTTCCTTCAGGATGCAATGGCCACAATATGCAGATCTACAGGTCAATGGTATGCCTGTTCGTGCCATTAATAGACCTAATTCGCAACTTCTTGGAGCTAATGGTCGTGATGATGGTCCCATTATCACACCATACACGAGAGACGGAATTAATAAGATTTGCTTAACAATATGTGATGCCCGTATTTTCTGCTTAGGGGTTCGTATTGTGAAGAGGCGCACTGTCCAACAGATTCTCAATCTGATTCCTAAGGAGTCTGATGGTGAACGATTTGAAGATGCTCTTGCTCGTGTTTGTCGTTGTGTTGGTGGCGGTACTGCAATGGATAATGATGATAGTGACAGTGACTTGGAAGTTGTGGCAGATTCGTTCACCGTCAATCTTCGATGTCCAATGAGTGGTTCAAGGATGAAGGTGGCTGGTAGATTCAAACCTTGTCTTCACATGGGCTGTTTTGATCTGGATGTTTTTGTTGAACTAAATCAGCGTTCAAGGAAGTGGCAATGTCCAATTTGTCTAAAGAACTACGCATTGGAGAATGTCATTGTTGATCCTTATTTTAATCGTATCGCTTCCAAGATGAGACATTGTGGAGAAGATGTTGCAGAGATAGAGGTGAAGCCTGATGGTTCTTGGCGAGCAAAGGTTAAAACTGAAAGTGAATGCAGGGAACTTGGGGAACTTGGGTGGTGGCACCTTCCTGATAGTACGCTTTGCATTCCAACAAATGGAGAAACTACCCCAAAATCGGAGGTGTTGAAGCCGGTCAAACAGGAAGGTGTTTCAGAAGGTCATACTGGTCTAAAACTTGGAATCAGGAAGAACCGGAATGGTGTTTGGGAAGTTAGCAGACCTGAAGAAATGAACACTTCTTCTGGTAACAAGTTACAACAGCAGTTTGGAGAACATGAGCTTAAAGTTATCCCCATGAGTAGCAGTGCCACTGGGAGTGGTAGGGATGGTGAAGATGCAAGTGTAAATCAGGACGGTGGTGGGAATTTTGATTTCTCTACGAACAATGGAATAGAGATGGATTCTTTTTCTCTGAATGTTGATTCAGCATATGGATTTGCAGCACCAAATTCTTCTGCACCAGTAGGAGATGCAGAAGTTATTGTACTAAGTGATTCAGATGAAGACATAATGCCTTCTGAAACCATTTACGGGAATAATTTTTCTGATGCTGGTGGAATTGGTTTTCCTGTGCCCTCTTCAGGAATTGCTGATTCTTACGGTGAAGATCCTGTGCTTGCTAATGGGGGTAATTCATGCTTGGGTCTTTTTAGTGGCAATGACGATGAATATCTGTCCAACTGGCCACCATTACCTCCTGGAACTCAAGGTGGCGCTGGATTCCAATTATTTAGCTCTGAGGCAGATCTACCAGATCCCCTAGTCAGTCTTCATCATGATTCCATAAATTGTTCCACATCTATGAATGGATACACGTTGGCTCCAGAAGCTGCCATGGGATCTGCCACTCTAGCCCATGAATCATCTGTTGGTCCTTTAGATACTGACATGAATGATGGCTTAGTTGATAATCCCTTGGCTTTTACTGGTGATGATCCCTCTCTTCAAATTTTTCTTCCCACAAGACCATCAGATGCATCACTTCAATCCAATATGAGAGATCGGGCTGATGTGTCGAATGGTGTTCATTCAGAGGATTGGATATCTCTTAGGCTAGGGGGTGATGCCAGTGGCTTTAAAGGAGAATCTGGGACTCCAAATGGACAGATTTCTAAAAGGCATGTGCCATCTAGAGAAGCTACAATGAATACTTTGGCTGAAGGTTCGTTTTCTTTTGACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0001101 GO:0002682 GO:0002683 GO:0002831 GO:0002832 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006935 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0009266 GO:0009267 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009553 GO:0009593 GO:0009605 GO:0009628 GO:0009653 GO:0009787 GO:0009791 GO:0009826 GO:0009856 GO:0009908 GO:0009909 GO:0009910 GO:0009966 GO:0009987 GO:0009991 GO:0010035 GO:0010112 GO:0010113 GO:0010183 GO:0010247 GO:0010286 GO:0010337 GO:0010565 GO:0010646 GO:0010817 GO:0016036 GO:0016043 GO:0016049 GO:0016740 GO:0016925 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0019787 GO:0019789 GO:0022414 GO:0023051 GO:0031323 GO:0031347 GO:0031348 GO:0031667 GO:0031668 GO:0031669 GO:0032101 GO:0032102 GO:0032350 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0033554 GO:0035670 GO:0036211 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044706 GO:0045088 GO:0045824 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048868 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050826 GO:0050896 GO:0050918 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051301 GO:0051606 GO:0051704 GO:0051716 GO:0060560 GO:0061458 GO:0061659 GO:0061665 GO:0062012 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0071840 GO:0080134 GO:0090352 GO:0090567 GO:0099402 GO:0140096 GO:1901419 GO:1901564 GO:1901700 GO:1903314 GO:1905957 GO:2000026 GO:2000070 GO:2000241 GO:2000242
Pfam Domains
Protein Families

Protein Analysis

840

Amino Acids

91.66

Weight (kDa)

4.86

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAP PF02037 14 - 44 7.5e-08 SAP domain
zf-MIZ PF02891 360 - 408 6.2e-19 MIZ/SP-RING zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 434
AccB1I GGYRCC 1 cut(s) 1395
AccB7I CCANNNNNTGG 3 cut(s) 584, 1100, 1430
AccI GTMKAC 1 cut(s) 499
AciI CCGC 2 cut(s) 354, 1014
AclI AACGTT 1 cut(s) 617
AclWI GGATC 8 cut(s) 114, 311, 402, 1247, 1937, 2084, 2182, 2264
AcoI YGGCCR 3 cut(s) 161, 722, 2018
AcsI RAATTY 3 cut(s) 1699, 1783, 2283
AcuI CTGAAG 4 cut(s) 694, 1578, 1899, 2514
AfaI GTAC 5 cut(s) 189, 600, 1018, 1411, 1821
AfiI CCNNNNNNNGG 8 cut(s) 455, 523, 584, 1100, 1430, 1450, 1866, 1916
AflIII ACRYGT 1 cut(s) 2148
AhdI GACNNNNNGTC 1 cut(s) 649
AjnI CCWGG 1 cut(s) 2032
AjuI GAANNNNNNNTTGG 6 cut(s) 1087, 1119, 1217, 1249, 2187, 2219
AluBI AGCT 8 cut(s) 14, 55, 512, 800, 1615, 2070, 2165, 2474
AluI AGCT 8 cut(s) 14, 55, 512, 800, 1615, 2070, 2165, 2474
Alw21I GWGCWC 1 cut(s) 57
Alw26I GTCTC 3 cut(s) 353, 837, 1279
AlwI GGATC 8 cut(s) 114, 311, 402, 1247, 1937, 2084, 2182, 2264
AlwNI CAGNNNCTG 2 cut(s) 473, 2165
AoxI GGCC 4 cut(s) 161, 265, 722, 2018
ApeKI GCWGC 2 cut(s) 1775, 2165
ApoI RAATTY 3 cut(s) 1699, 1783, 2283
AseI ATTAAT 2 cut(s) 771, 852
AspLEI GCGC 2 cut(s) 921, 2051
AspS9I GGNCC 3 cut(s) 265, 818, 2207
AsuHPI GGTGA 9 cut(s) 61, 317, 977, 1066, 1330, 1676, 1949, 2276, 2408
AvaII GGWCC 2 cut(s) 818, 2207
AxyI CCTNAGG 1 cut(s) 951
BaeGI GKGCMC 1 cut(s) 1911
BalI TGGCCA 3 cut(s) 163, 724, 2020
BanI GGYRCC 1 cut(s) 1395
BanII GRGCYC 1 cut(s) 57
BarI GAAGNNNNNNTAC 4 cut(s) 519, 551, 1803, 1835
BauI CACGAG 2 cut(s) 838, 990
BbsI GAAGAC 4 cut(s) 176, 1133, 1845, 2096
Bbv12I GWGCWC 1 cut(s) 57
BbvI GCAGC 2 cut(s) 1787, 2152
BciT130I CCWGG 1 cut(s) 2034
BciVI GTATCC 1 cut(s) 2138
BclI TGATCA 1 cut(s) 381
BcoDI GTCTC 3 cut(s) 353, 837, 1279
BfaI CTAG 5 cut(s) 15, 2096, 2186, 2390, 2466
BfmI CTRYAG 2 cut(s) 217, 740
BfoI RGCGCY 1 cut(s) 2052
BfuI GTATCC 1 cut(s) 2138
BglII AGATCT 2 cut(s) 736, 2080
BisI GCNGC 2 cut(s) 1776, 2166
BlsI GCNGC 2 cut(s) 1777, 2167
Bme1390I CCNGG 1 cut(s) 2034
Bme18I GGWCC 2 cut(s) 818, 2207
BmeRI GACNNNNNGTC 1 cut(s) 649
BmgT120I GGNCC 3 cut(s) 265, 818, 2207
BmiI GGNNCC 3 cut(s) 820, 1397, 2157
BmrFI CCNGG 1 cut(s) 2034
BmrI ACTGGG 1 cut(s) 1656
BmuI ACTGGG 1 cut(s) 1656
BpiI GAAGAC 4 cut(s) 176, 1133, 1845, 2096
BpmI CTGGAG 1 cut(s) 2142
Bpu10I CCTNAGC 1 cut(s) 895
BpuEI CTTGAG 2 cut(s) 41, 2025
BsaBI GATNNNNATC 1 cut(s) 2004
BsaJI CCNNGG 2 cut(s) 2169, 2250
BsaWI WCCGGW 2 cut(s) 117, 1527
BsaXI ACNNNNNCTCC 4 cut(s) 1287, 1317, 2140, 2170
Bsc4I CCNNNNNNNGG 8 cut(s) 455, 523, 584, 1100, 1430, 1450, 1866, 1916
Bse118I RCCGGY 1 cut(s) 1465
Bse1I ACTGG 8 cut(s) 268, 467, 1504, 1651, 1796, 2021, 2266, 2403
Bse21I CCTNAGG 1 cut(s) 951
Bse3DI GCAATG 5 cut(s) 295, 725, 1029, 1211, 1999
Bse8I GATNNNNATC 1 cut(s) 2004
BseBI CCWGG 1 cut(s) 2034
BseDI CCNNGG 2 cut(s) 2169, 2250
BseGI GGATG 7 cut(s) 67, 538, 547, 720, 1116, 1171, 1666
BseJI GATNNNNATC 1 cut(s) 2004
BseLI CCNNNNNNNGG 8 cut(s) 455, 523, 584, 1100, 1430, 1450, 1866, 1916
BseMI GCAATG 5 cut(s) 295, 725, 1029, 1211, 1999
BseMII CTCAG 3 cut(s) 342, 389, 2064
BseNI ACTGG 8 cut(s) 268, 467, 1504, 1651, 1796, 2021, 2266, 2403
BseSI GKGCMC 1 cut(s) 1911
BseXI GCAGC 2 cut(s) 1787, 2152
BsgI GTGCAG 1 cut(s) 1776
BshFI GGCC 4 cut(s) 163, 267, 724, 2020
BshNI GGYRCC 1 cut(s) 1395
BsiHKAI GWGCWC 1 cut(s) 57
BsiSI CCGG 3 cut(s) 118, 1466, 1528
BslFI GGGAC 4 cut(s) 112, 656, 804, 2440
BslI CCNNNNNNNGG 8 cut(s) 455, 523, 584, 1100, 1430, 1450, 1866, 1916
BsmAI GTCTC 3 cut(s) 353, 837, 1279
BsmBI CGTCTC 1 cut(s) 837
BsmFI GGGAC 4 cut(s) 112, 656, 804, 2440
BsmI GAATGC 2 cut(s) 1370, 1419
BsnI GGCC 4 cut(s) 163, 267, 724, 2020
Bsp1286I GDGCHC 2 cut(s) 57, 1911
Bsp1407I TGTACA 1 cut(s) 598
Bsp19I CCATGG 1 cut(s) 2169
BspACI CCGC 2 cut(s) 354, 1014
BspANI GGCC 4 cut(s) 163, 267, 724, 2020
BspCNI CTCAG 3 cut(s) 341, 390, 2065
BspHI TCATGA 1 cut(s) 2110
BspLI GGNNCC 3 cut(s) 820, 1397, 2157
BspPI GGATC 8 cut(s) 114, 311, 402, 1247, 1937, 2084, 2182, 2264
BspT107I GGYRCC 1 cut(s) 1395
BsrDI GCAATG 5 cut(s) 295, 725, 1029, 1211, 1999
BsrFI RCCGGY 1 cut(s) 1465
BsrGI TGTACA 1 cut(s) 598
BsrI ACTGG 8 cut(s) 268, 467, 1504, 1651, 1796, 2021, 2266, 2403
BssAI RCCGGY 1 cut(s) 1465
BssECI CCNNGG 2 cut(s) 2169, 2250
BssSI CACGAG 2 cut(s) 838, 990
BssT1I CCWWGG 2 cut(s) 2169, 2250
Bst2BI CACGAG 2 cut(s) 838, 990
Bst2UI CCWGG 1 cut(s) 2034
Bst4CI ACNGT 6 cut(s) 532, 925, 1046, 1078, 1691, 1937
Bst6I CTCTTC 3 cut(s) 908, 1918, 2283
BstAUI TGTACA 1 cut(s) 598
BstC8I GCNNGC 3 cut(s) 686, 1341, 1953
BstDEI CTNAG 9 cut(s) 328, 398, 503, 895, 951, 1823, 2073, 2236, 2384
BstDSI CCRYGG 1 cut(s) 2169
BstF5I GGATG 7 cut(s) 67, 538, 547, 720, 1116, 1171, 1666
BstH2I RGCGCY 1 cut(s) 2052
BstHHI GCGC 2 cut(s) 921, 2051
BstMAI GTCTC 3 cut(s) 353, 837, 1279
BstMWI GCNNNNNNNGC 2 cut(s) 2162, 2186
BstNI CCWGG 1 cut(s) 2034
BstNSI RCATGY 2 cut(s) 688, 2459
BstSCI CCNGG 1 cut(s) 2032
BstSFI CTRYAG 2 cut(s) 217, 740
BstSLI GKGCMC 1 cut(s) 1911
BstV1I GCAGC 2 cut(s) 1787, 2152
BstV2I GAAGAC 4 cut(s) 176, 1133, 1845, 2096
BstX2I RGATCY 7 cut(s) 106, 394, 736, 1942, 2080, 2089, 2174
BstYI RGATCY 7 cut(s) 106, 394, 736, 1942, 2080, 2089, 2174
Bsu36I CCTNAGG 1 cut(s) 951
BsuI GTATCC 1 cut(s) 2138
BsuRI GGCC 4 cut(s) 163, 267, 724, 2020
BtgI CCRYGG 1 cut(s) 2169
BtsCI GGATG 7 cut(s) 67, 538, 547, 720, 1116, 1171, 1666
BtsI GCAGTG 1 cut(s) 1645
BtsIMutI CAGTG 7 cut(s) 246, 275, 921, 1051, 1644, 1645, 2410
Cac8I GCNNGC 3 cut(s) 686, 1341, 1953
CaiI CAGNNNCTG 2 cut(s) 473, 2165
CciI TCATGA 1 cut(s) 2110
CfoI GCGC 2 cut(s) 921, 2051
Cfr10I RCCGGY 1 cut(s) 1465
Cfr13I GGNCC 3 cut(s) 265, 818, 2207
Csp6I GTAC 5 cut(s) 188, 599, 1017, 1410, 1820
CviQI GTAC 5 cut(s) 188, 599, 1017, 1410, 1820
DdeI CTNAG 9 cut(s) 328, 398, 503, 895, 951, 1823, 2073, 2236, 2384
DraI TTTAAA 1 cut(s) 2413
DriI GACNNNNNGTC 1 cut(s) 649
EaeI YGGCCR 3 cut(s) 161, 722, 2018
Eam1104I CTCTTC 3 cut(s) 908, 1918, 2283
Eam1105I GACNNNNNGTC 1 cut(s) 649
EarI CTCTTC 3 cut(s) 908, 1918, 2283
Ecl136II GAGCTC 1 cut(s) 55
Eco130I CCWWGG 2 cut(s) 2169, 2250
Eco24I GRGCYC 1 cut(s) 57
Eco32I GATATC 1 cut(s) 2379
Eco47I GGWCC 2 cut(s) 818, 2207
Eco53kI GAGCTC 1 cut(s) 55
Eco57I CTGAAG 4 cut(s) 694, 1578, 1899, 2514
Eco81I CCTNAGG 1 cut(s) 951
EcoICRI GAGCTC 1 cut(s) 55
EcoRII CCWGG 1 cut(s) 2032
EcoRV GATATC 1 cut(s) 2379
EcoT14I CCWWGG 2 cut(s) 2169, 2250
EcoT22I ATGCAT 1 cut(s) 2314
EcoT38I GRGCYC 1 cut(s) 57
ErhI CCWWGG 2 cut(s) 2169, 2250
Esp3I CGTCTC 1 cut(s) 837
FalI AAGNNNNNCTT 4 cut(s) 848, 880, 969, 1001
FaqI GGGAC 4 cut(s) 112, 656, 804, 2440
FauI CCCGC 1 cut(s) 347
FauNDI CATATG 1 cut(s) 1765
FbaI TGATCA 1 cut(s) 381
FblI GTMKAC 1 cut(s) 499
Fnu4HI GCNGC 2 cut(s) 1776, 2166
FokI GGATG 7 cut(s) 74, 525, 534, 727, 1123, 1178, 1673
FriOI GRGCYC 1 cut(s) 57
Fsp4HI GCNGC 2 cut(s) 1776, 2166
FspBI CTAG 5 cut(s) 15, 2096, 2186, 2390, 2466
GlaI GCGC 2 cut(s) 920, 2050
GluI GCNGC 2 cut(s) 1776, 2166
GsuI CTGGAG 1 cut(s) 2142
HaeII RGCGCY 1 cut(s) 2052
HaeIII GGCC 4 cut(s) 163, 267, 724, 2020
HapII CCGG 3 cut(s) 118, 1466, 1528
HhaI GCGC 2 cut(s) 921, 2051
Hin6I GCGC 2 cut(s) 919, 2049
HinP1I GCGC 2 cut(s) 919, 2049
HincII GTYRAC 2 cut(s) 115, 500
HindII GTYRAC 2 cut(s) 115, 500
HpaII CCGG 3 cut(s) 118, 1466, 1528
HphI GGTGA 9 cut(s) 61, 317, 977, 1066, 1330, 1676, 1949, 2276, 2408
Hpy166II GTNNAC 5 cut(s) 115, 491, 500, 968, 1074
Hpy8I GTNNAC 5 cut(s) 115, 491, 500, 968, 1074
HpyCH4III ACNGT 6 cut(s) 532, 925, 1046, 1078, 1691, 1937
HpyCH4IV ACGT 2 cut(s) 617, 2150
HpyF10VI GCNNNNNNNGC 2 cut(s) 2162, 2186
HpyF3I CTNAG 9 cut(s) 328, 398, 503, 895, 951, 1823, 2073, 2236, 2384
HpySE526I ACGT 2 cut(s) 617, 2150
HspAI GCGC 2 cut(s) 919, 2049
Ksp22I TGATCA 1 cut(s) 381
LmnI GCTCC 2 cut(s) 797, 2161
Lsp1109I GCAGC 2 cut(s) 1787, 2152
MaeI CTAG 5 cut(s) 15, 2096, 2186, 2390, 2466
MaeII ACGT 2 cut(s) 617, 2150
MaeIII GTNAC 6 cut(s) 526, 565, 1040, 1046, 1580, 1587
MflI RGATCY 7 cut(s) 106, 394, 736, 1942, 2080, 2089, 2174
MhlI GDGCHC 2 cut(s) 57, 1911
MlsI TGGCCA 3 cut(s) 163, 724, 2020
MluNI TGGCCA 3 cut(s) 163, 724, 2020
MlyI GAGTC 3 cut(s) 383, 965, 2422
MmeI TCCRAC 5 cut(s) 160, 602, 952, 1448, 2037
Mox20I TGGCCA 3 cut(s) 163, 724, 2020
Mph1103I ATGCAT 1 cut(s) 2314
MscI TGGCCA 3 cut(s) 163, 724, 2020
MslI CAYNNNNRTG 1 cut(s) 2135
Msp20I TGGCCA 3 cut(s) 163, 724, 2020
MspI CCGG 3 cut(s) 118, 1466, 1528
MspR9I CCNGG 1 cut(s) 2034
Mva1269I GAATGC 2 cut(s) 1370, 1419
MvaI CCWGG 1 cut(s) 2034
MwoI GCNNNNNNNGC 2 cut(s) 2162, 2186
NcoI CCATGG 1 cut(s) 2169
NdeI CATATG 1 cut(s) 1765
NlaIV GGNNCC 3 cut(s) 820, 1397, 2157
NmuCI GTSAC 2 cut(s) 1040, 1046
NsiI ATGCAT 1 cut(s) 2314
NspI RCATGY 2 cut(s) 688, 2459
PaeI GCATGC 1 cut(s) 688
PagI TCATGA 1 cut(s) 2110
PcsI WCGNNNNNNNCGW 2 cut(s) 505, 997
PctI GAATGC 2 cut(s) 1370, 1419
PflFI GACNNNGTC 1 cut(s) 504
PflMI CCANNNNNTGG 3 cut(s) 584, 1100, 1430
PfoI TCCNGGA 1 cut(s) 2032
PkrI GCNGC 2 cut(s) 1777, 2167
PleI GAGTC 3 cut(s) 382, 964, 2422
PpsI GAGTC 3 cut(s) 382, 964, 2422
PshBI ATTAAT 2 cut(s) 771, 852
PsiI TTATAA 1 cut(s) 434
Psp124BI GAGCTC 1 cut(s) 57
Psp1406I AACGTT 1 cut(s) 617
Psp6I CCWGG 1 cut(s) 2032
PspGI CCWGG 1 cut(s) 2032
PspN4I GGNNCC 3 cut(s) 820, 1397, 2157
PspPI GGNCC 3 cut(s) 265, 818, 2207
PstNI CAGNNNCTG 2 cut(s) 473, 2165
PsuI RGATCY 7 cut(s) 106, 394, 736, 1942, 2080, 2089, 2174
PsyI GACNNNGTC 1 cut(s) 504
RsaI GTAC 5 cut(s) 189, 600, 1018, 1411, 1821
RsaNI GTAC 5 cut(s) 188, 599, 1017, 1410, 1820
RseI CAYNNNNRTG 1 cut(s) 2135
SacI GAGCTC 1 cut(s) 57
SalI GTCGAC 1 cut(s) 498
SatI GCNGC 2 cut(s) 1776, 2166
Sau96I GGNCC 3 cut(s) 265, 818, 2207
SchI GAGTC 3 cut(s) 383, 965, 2422
ScrFI CCNGG 1 cut(s) 2034
SduI GDGCHC 2 cut(s) 57, 1911
SfcI CTRYAG 2 cut(s) 217, 740
SinI GGWCC 2 cut(s) 818, 2207
SmiMI CAYNNNNRTG 1 cut(s) 2135
SmlI CTYRAG 2 cut(s) 56, 2040
SmoI CTYRAG 2 cut(s) 56, 2040
SphI GCATGC 1 cut(s) 688
SsiI CCGC 2 cut(s) 354, 1014
SspI AATATT 1 cut(s) 574
SspMI CTAG 5 cut(s) 15, 2096, 2186, 2390, 2466
SstI GAGCTC 1 cut(s) 57
StyD4I CCNGG 1 cut(s) 2032
StyI CCWWGG 2 cut(s) 2169, 2250
TaaI ACNGT 6 cut(s) 532, 925, 1046, 1078, 1691, 1937
TaiI ACGT 2 cut(s) 620, 2153
TaqI TCGA 5 cut(s) 260, 499, 508, 1087, 2351
TatI WGTACW 2 cut(s) 598, 1819
TscAI CASTG 7 cut(s) 253, 275, 928, 1051, 1645, 1651, 2410
TseFI GTSAC 2 cut(s) 1040, 1046
TseI GCWGC 2 cut(s) 1775, 2165
Tsp45I GTSAC 2 cut(s) 1040, 1046
TspGWI ACGGA 1 cut(s) 861
TspRI CASTG 7 cut(s) 253, 275, 928, 1051, 1645, 1651, 2410
Tth111I GACNNNGTC 1 cut(s) 504
Van91I CCANNNNNTGG 3 cut(s) 584, 1100, 1430
VpaK11BI GGWCC 2 cut(s) 818, 2207
VspI ATTAAT 2 cut(s) 771, 852
XapI RAATTY 3 cut(s) 1699, 1783, 2283
XbaI TCTAGA 1 cut(s) 2465
XceI RCATGY 2 cut(s) 688, 2459
XmiI GTMKAC 1 cut(s) 499
XspI CTAG 5 cut(s) 15, 2096, 2186, 2390, 2466
Zsp2I ATGCAT 1 cut(s) 2314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.