homeobox-leucine zipper protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60690 |
| fragaria_vesca | FvH4_3g32190 FvH4_3g32190 FvH4_3g32190 FvH4_3g32190 |
| malus_domestica | MD03G1118500.v1.1 MD11G1136800.v1.1 |
| prunus_persica | Prupe.6G102300_v2.0.a1 |
| pyrus_communis | pycom11g11330 |
| rosa_chinensis | RchiOBHm_Chr5g0058801 |
| rosa_laevigata | RLG00000035251 |
| rosa_multiflora | Rmu_sc0005911.1_g000011 Rmu_sc0041020.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00021600 |
| rosa_rugosa | Rorug05G0319200 |
| rosa_samantha | Rh5AG384000 Rh5BG395900 Rh5CG419800 Rh5DG411600 |
| rosa_wichuraiana | Rw5G036180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 222 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1581 |
| Acc36I | ACCTGC | 2 cut(s) | 222, 331 |
| AccBSI | CCGCTC | 1 cut(s) | 1259 |
| AccI | GTMKAC | 3 cut(s) | 120, 154, 1238 |
| AccII | CGCG | 3 cut(s) | 804, 1088, 1910 |
| AccIII | TCCGGA | 2 cut(s) | 568, 1024 |
| AclWI | GGATC | 7 cut(s) | 160, 398, 661, 1384, 2071, 2102, 2193 |
| AcoI | YGGCCR | 2 cut(s) | 186, 680 |
| AcuI | CTGAAG | 5 cut(s) | 888, 1619, 2091, 2373, 2487 |
| AcyI | GRCGYC | 1 cut(s) | 260 |
| AfaI | GTAC | 6 cut(s) | 77, 86, 1645, 1782, 1810, 2169 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 514, 965, 1092, 2041, 2042 |
| AflIII | ACRYGT | 2 cut(s) | 1999, 2419 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1234 |
| AjnI | CCWGG | 3 cut(s) | 550, 562, 2059 |
| Alw21I | GWGCWC | 1 cut(s) | 1341 |
| Alw26I | GTCTC | 3 cut(s) | 485, 1486, 2264 |
| AlwI | GGATC | 7 cut(s) | 160, 398, 661, 1384, 2071, 2102, 2193 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 527 |
| Ama87I | CYCGRG | 3 cut(s) | 621, 1888, 2035 |
| Aor13HI | TCCGGA | 2 cut(s) | 568, 1024 |
| AoxI | GGCC | 4 cut(s) | 186, 680, 890, 956 |
| ApeKI | GCWGC | 6 cut(s) | 382, 617, 899, 1153, 1451, 2459 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2095, 2127 |
| AseI | ATTAAT | 1 cut(s) | 1701 |
| AspS9I | GGNCC | 4 cut(s) | 566, 813, 890, 1841 |
| AsuC2I | CCSGG | 4 cut(s) | 731, 1485, 1648, 1715 |
| AsuHPI | GGTGA | 7 cut(s) | 989, 1139, 1235, 1796, 1839, 2010, 2180 |
| AvaI | CYCGRG | 3 cut(s) | 621, 1888, 2035 |
| AvaII | GGWCC | 3 cut(s) | 566, 813, 1841 |
| BalI | TGGCCA | 1 cut(s) | 188 |
| BanII | GRGCYC | 1 cut(s) | 2048 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2160, 2192 |
| BbsI | GAAGAC | 1 cut(s) | 2422 |
| Bbv12I | GWGCWC | 1 cut(s) | 1341 |
| BbvCI | CCTCAGC | 1 cut(s) | 435 |
| BbvI | GCAGC | 6 cut(s) | 394, 629, 886, 1165, 1438, 2446 |
| BccI | CCATC | 8 cut(s) | 307, 691, 959, 1247, 1635, 1852, 2207, 2404 |
| BceAI | ACGGC | 1 cut(s) | 1649 |
| BciT130I | CCWGG | 3 cut(s) | 552, 564, 2061 |
| BcnI | CCSGG | 4 cut(s) | 731, 1485, 1648, 1715 |
| BcoDI | GTCTC | 3 cut(s) | 485, 1486, 2264 |
| BfaI | CTAG | 9 cut(s) | 141, 939, 1532, 1562, 1814, 1827, 1878, 2258, 2267 |
| BfmI | CTRYAG | 2 cut(s) | 519, 700 |
| BfuAI | ACCTGC | 2 cut(s) | 222, 331 |
| BglII | AGATCT | 1 cut(s) | 1786 |
| BisI | GCNGC | 6 cut(s) | 383, 618, 900, 1154, 1452, 2460 |
| BlpI | GCTNAGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 6 cut(s) | 384, 619, 901, 1155, 1453, 2461 |
| Bme1390I | CCNGG | 7 cut(s) | 552, 564, 731, 1485, 1648, 1715, 2061 |
| Bme18I | GGWCC | 3 cut(s) | 566, 813, 1841 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1234 |
| BmeT110I | CYCGRG | 3 cut(s) | 621, 1888, 2035 |
| BmgT120I | GGNCC | 4 cut(s) | 566, 813, 890, 1841 |
| BmiI | GGNNCC | 7 cut(s) | 269, 692, 707, 795, 815, 1397, 2047 |
| BmrFI | CCNGG | 7 cut(s) | 552, 564, 731, 1485, 1648, 1715, 2061 |
| BmrI | ACTGGG | 1 cut(s) | 1518 |
| BmuI | ACTGGG | 1 cut(s) | 1518 |
| BpiI | GAAGAC | 1 cut(s) | 2422 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1323, 1355 |
| BpmI | CTGGAG | 2 cut(s) | 254, 903 |
| Bpu10I | CCTNAGC | 3 cut(s) | 135, 201, 435 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 4 cut(s) | 131, 1028, 1581, 1867 |
| BpuMI | CCSGG | 4 cut(s) | 731, 1485, 1648, 1715 |
| Bsa29I | ATCGAT | 1 cut(s) | 1411 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1626 |
| BsaHI | GRCGYC | 1 cut(s) | 260 |
| BsaI | GGTCTC | 1 cut(s) | 1486 |
| BsaJI | CCNNGG | 5 cut(s) | 513, 551, 1327, 1347, 2059 |
| BsaWI | WCCGGW | 4 cut(s) | 282, 568, 1024, 1392 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 778, 808 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 514, 965, 1092, 2041, 2042 |
| Bse1I | ACTGG | 4 cut(s) | 1513, 1581, 2228, 2519 |
| Bse3DI | GCAATG | 2 cut(s) | 613, 2013 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1626 |
| BseAI | TCCGGA | 2 cut(s) | 568, 1024 |
| BseBI | CCWGG | 3 cut(s) | 552, 564, 2061 |
| BseCI | ATCGAT | 1 cut(s) | 1411 |
| BseDI | CCNNGG | 5 cut(s) | 513, 551, 1327, 1347, 2059 |
| BseGI | GGATG | 6 cut(s) | 561, 1033, 1052, 1627, 1723, 2199 |
| BseJI | GATNNNNATC | 1 cut(s) | 1626 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 514, 965, 1092, 2041, 2042 |
| BseMI | GCAATG | 2 cut(s) | 613, 2013 |
| BseMII | CTCAG | 9 cut(s) | 84, 117, 362, 449, 809, 926, 1407, 1842, 2102 |
| BseNI | ACTGG | 4 cut(s) | 1513, 1581, 2228, 2519 |
| BseRI | GAGGAG | 4 cut(s) | 332, 423, 503, 1990 |
| BseXI | GCAGC | 6 cut(s) | 394, 629, 886, 1165, 1438, 2446 |
| BseYI | CCCAGC | 1 cut(s) | 887 |
| Bsh1236I | CGCG | 3 cut(s) | 804, 1088, 1910 |
| BshFI | GGCC | 4 cut(s) | 188, 682, 892, 958 |
| BshVI | ATCGAT | 1 cut(s) | 1411 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1341 |
| BsiHKCI | CYCGRG | 3 cut(s) | 621, 1888, 2035 |
| BsiSI | CCGG | 8 cut(s) | 283, 569, 731, 1025, 1393, 1484, 1647, 1715 |
| BslFI | GGGAC | 1 cut(s) | 2041 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 514, 965, 1092, 2041, 2042 |
| BsmAI | GTCTC | 3 cut(s) | 485, 1486, 2264 |
| BsmFI | GGGAC | 1 cut(s) | 2041 |
| BsmI | GAATGC | 3 cut(s) | 439, 1666, 1861 |
| BsnI | GGCC | 4 cut(s) | 188, 682, 892, 958 |
| Bso31I | GGTCTC | 1 cut(s) | 1486 |
| BsoBI | CYCGRG | 3 cut(s) | 621, 1888, 2035 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1341, 2048 |
| Bsp13I | TCCGGA | 2 cut(s) | 568, 1024 |
| Bsp1407I | TGTACA | 1 cut(s) | 1780 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 93 |
| BspANI | GGCC | 4 cut(s) | 188, 682, 892, 958 |
| BspCNI | CTCAG | 9 cut(s) | 85, 118, 361, 448, 810, 925, 1408, 1843, 2101 |
| BspDI | ATCGAT | 1 cut(s) | 1411 |
| BspEI | TCCGGA | 2 cut(s) | 568, 1024 |
| BspFNI | CGCG | 3 cut(s) | 804, 1088, 1910 |
| BspLI | GGNNCC | 7 cut(s) | 269, 692, 707, 795, 815, 1397, 2047 |
| BspMI | ACCTGC | 2 cut(s) | 222, 331 |
| BspPI | GGATC | 7 cut(s) | 160, 398, 661, 1384, 2071, 2102, 2193 |
| BspTNI | GGTCTC | 1 cut(s) | 1486 |
| BsrBI | CCGCTC | 1 cut(s) | 1259 |
| BsrDI | GCAATG | 2 cut(s) | 613, 2013 |
| BsrGI | TGTACA | 1 cut(s) | 1780 |
| BsrI | ACTGG | 4 cut(s) | 1513, 1581, 2228, 2519 |
| BssECI | CCNNGG | 5 cut(s) | 513, 551, 1327, 1347, 2059 |
| BssNI | GRCGYC | 1 cut(s) | 260 |
| BssT1I | CCWWGG | 3 cut(s) | 513, 1327, 1347 |
| Bst2UI | CCWGG | 3 cut(s) | 552, 564, 2061 |
| Bst4CI | ACNGT | 8 cut(s) | 26, 44, 309, 394, 701, 1808, 2022, 2111 |
| BstACI | GRCGYC | 1 cut(s) | 260 |
| BstAUI | TGTACA | 1 cut(s) | 1780 |
| BstC8I | GCNNGC | 5 cut(s) | 802, 1158, 1337, 2380, 2384 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 512 |
| BstF5I | GGATG | 6 cut(s) | 561, 1033, 1052, 1627, 1723, 2199 |
| BstFNI | CGCG | 3 cut(s) | 804, 1088, 1910 |
| BstMAI | GTCTC | 3 cut(s) | 485, 1486, 2264 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 623, 905, 1448, 1670, 1958, 2249 |
| BstNI | CCWGG | 3 cut(s) | 552, 564, 2061 |
| BstNSI | RCATGY | 2 cut(s) | 2266, 2423 |
| BstSCI | CCNGG | 7 cut(s) | 550, 562, 729, 1483, 1646, 1713, 2059 |
| BstSFI | CTRYAG | 2 cut(s) | 519, 700 |
| BstUI | CGCG | 3 cut(s) | 804, 1088, 1910 |
| BstV1I | GCAGC | 6 cut(s) | 394, 629, 886, 1165, 1438, 2446 |
| BstV2I | GAAGAC | 1 cut(s) | 2422 |
| BstX2I | RGATCY | 4 cut(s) | 666, 1786, 2063, 2094 |
| BstYI | RGATCY | 4 cut(s) | 666, 1786, 2063, 2094 |
| Bsu15I | ATCGAT | 1 cut(s) | 1411 |
| BsuRI | GGCC | 4 cut(s) | 188, 682, 892, 958 |
| BsuTUI | ATCGAT | 1 cut(s) | 1411 |
| BtgZI | GCGATG | 1 cut(s) | 311 |
| BtsCI | GGATG | 6 cut(s) | 561, 1033, 1052, 1627, 1723, 2199 |
| BtsI | GCAGTG | 1 cut(s) | 43 |
| BtsIMutI | CAGTG | 4 cut(s) | 43, 1506, 2096, 2235 |
| BveI | ACCTGC | 2 cut(s) | 222, 331 |
| Cac8I | GCNNGC | 5 cut(s) | 802, 1158, 1337, 2380, 2384 |
| CaiI | CAGNNNCTG | 1 cut(s) | 527 |
| Cfr13I | GGNCC | 4 cut(s) | 566, 813, 890, 1841 |
| ClaI | ATCGAT | 1 cut(s) | 1411 |
| CseI | GACGC | 1 cut(s) | 249 |
| Csp6I | GTAC | 6 cut(s) | 76, 85, 1644, 1781, 1809, 2168 |
| CviAII | CATG | 3 cut(s) | 2236, 2263, 2420 |
| CviQI | GTAC | 6 cut(s) | 76, 85, 1644, 1781, 1809, 2168 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1581 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1234 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1581 |
| EaeI | YGGCCR | 2 cut(s) | 186, 680 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1234 |
| Eco130I | CCWWGG | 3 cut(s) | 513, 1327, 1347 |
| Eco147I | AGGCCT | 1 cut(s) | 958 |
| Eco24I | GRGCYC | 1 cut(s) | 2048 |
| Eco31I | GGTCTC | 1 cut(s) | 1486 |
| Eco47I | GGWCC | 3 cut(s) | 566, 813, 1841 |
| Eco57I | CTGAAG | 5 cut(s) | 888, 1619, 2091, 2373, 2487 |
| Eco88I | CYCGRG | 3 cut(s) | 621, 1888, 2035 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 512 |
| EcoRII | CCWGG | 3 cut(s) | 550, 562, 2059 |
| EcoT14I | CCWWGG | 3 cut(s) | 513, 1327, 1347 |
| EcoT22I | ATGCAT | 3 cut(s) | 1248, 1444, 1609 |
| EcoT38I | GRGCYC | 1 cut(s) | 2048 |
| ErhI | CCWWGG | 3 cut(s) | 513, 1327, 1347 |
| FaeI | CATG | 3 cut(s) | 2239, 2266, 2423 |
| FaqI | GGGAC | 1 cut(s) | 2041 |
| FatI | CATG | 3 cut(s) | 2235, 2262, 2419 |
| FauI | CCCGC | 1 cut(s) | 809 |
| FblI | GTMKAC | 3 cut(s) | 120, 154, 1238 |
| Fnu4HI | GCNGC | 6 cut(s) | 383, 618, 900, 1154, 1452, 2460 |
| FokI | GGATG | 6 cut(s) | 568, 1039, 1040, 1634, 1730, 2186 |
| FriOI | GRGCYC | 1 cut(s) | 2048 |
| Fsp4HI | GCNGC | 6 cut(s) | 383, 618, 900, 1154, 1452, 2460 |
| FspBI | CTAG | 9 cut(s) | 141, 939, 1532, 1562, 1814, 1827, 1878, 2258, 2267 |
| GluI | GCNGC | 6 cut(s) | 383, 618, 900, 1154, 1452, 2460 |
| GsaI | CCCAGC | 1 cut(s) | 891 |
| GsuI | CTGGAG | 2 cut(s) | 254, 903 |
| HaeIII | GGCC | 4 cut(s) | 188, 682, 892, 958 |
| HapII | CCGG | 8 cut(s) | 283, 569, 731, 1025, 1393, 1484, 1647, 1715 |
| HgaI | GACGC | 1 cut(s) | 249 |
| Hin1I | GRCGYC | 1 cut(s) | 260 |
| Hin1II | CATG | 3 cut(s) | 2239, 2266, 2423 |
| HincII | GTYRAC | 4 cut(s) | 155, 400, 1794, 2406 |
| HindII | GTYRAC | 4 cut(s) | 155, 400, 1794, 2406 |
| HpaI | GTTAAC | 2 cut(s) | 400, 1794 |
| HpaII | CCGG | 8 cut(s) | 283, 569, 731, 1025, 1393, 1484, 1647, 1715 |
| HphI | GGTGA | 7 cut(s) | 989, 1139, 1235, 1796, 1839, 2010, 2180 |
| Hpy99I | CGWCG | 4 cut(s) | 156, 265, 1232, 2162 |
| HpyAV | CCTTC | 5 cut(s) | 1143, 1574, 1643, 2397, 2509 |
| HpyCH4III | ACNGT | 8 cut(s) | 26, 44, 309, 394, 701, 1808, 2022, 2111 |
| HpyCH4IV | ACGT | 3 cut(s) | 78, 773, 1999 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 623, 905, 1448, 1670, 1958, 2249 |
| HpySE526I | ACGT | 3 cut(s) | 78, 773, 1999 |
| Hsp92I | GRCGYC | 1 cut(s) | 260 |
| Hsp92II | CATG | 3 cut(s) | 2239, 2266, 2423 |
| Kpn2I | TCCGGA | 2 cut(s) | 568, 1024 |
| KspAI | GTTAAC | 2 cut(s) | 400, 1794 |
| Lsp1109I | GCAGC | 6 cut(s) | 394, 629, 886, 1165, 1438, 2446 |
| MaeI | CTAG | 9 cut(s) | 141, 939, 1532, 1562, 1814, 1827, 1878, 2258, 2267 |
| MaeII | ACGT | 3 cut(s) | 78, 773, 1999 |
| MaeIII | GTNAC | 7 cut(s) | 38, 424, 695, 1223, 1614, 2077, 2105 |
| MbiI | CCGCTC | 1 cut(s) | 1259 |
| MboII | GAAGA | 6 cut(s) | 667, 1274, 1565, 1613, 2427, 2480 |
| MfeI | CAATTG | 2 cut(s) | 161, 1542 |
| MflI | RGATCY | 4 cut(s) | 666, 1786, 2063, 2094 |
| MhlI | GDGCHC | 2 cut(s) | 1341, 2048 |
| MlsI | TGGCCA | 1 cut(s) | 188 |
| MluCI | AATT | 6 cut(s) | 161, 1106, 1312, 1542, 1916, 2051 |
| MluNI | TGGCCA | 1 cut(s) | 188 |
| MlyI | GAGTC | 7 cut(s) | 781, 1058, 1127, 1522, 1758, 2047, 2156 |
| MmeI | TCCRAC | 1 cut(s) | 1648 |
| Mox20I | TGGCCA | 1 cut(s) | 188 |
| Mph1103I | ATGCAT | 3 cut(s) | 1248, 1444, 1609 |
| MroI | TCCGGA | 2 cut(s) | 568, 1024 |
| MscI | TGGCCA | 1 cut(s) | 188 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1251, 2193 |
| Msp20I | TGGCCA | 1 cut(s) | 188 |
| MspA1I | CMGCKG | 2 cut(s) | 92, 1451 |
| MspI | CCGG | 8 cut(s) | 283, 569, 731, 1025, 1393, 1484, 1647, 1715 |
| MspR9I | CCNGG | 7 cut(s) | 552, 564, 731, 1485, 1648, 1715, 2061 |
| MunI | CAATTG | 2 cut(s) | 161, 1542 |
| Mva1269I | GAATGC | 3 cut(s) | 439, 1666, 1861 |
| MvaI | CCWGG | 3 cut(s) | 552, 564, 2061 |
| MvnI | CGCG | 3 cut(s) | 804, 1088, 1910 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 623, 905, 1448, 1670, 1958, 2249 |
| NciI | CCSGG | 4 cut(s) | 731, 1485, 1648, 1715 |
| NlaIII | CATG | 3 cut(s) | 2239, 2266, 2423 |
| NlaIV | GGNNCC | 7 cut(s) | 269, 692, 707, 795, 815, 1397, 2047 |
| NmuCI | GTSAC | 5 cut(s) | 38, 424, 695, 1223, 1614 |
| NsiI | ATGCAT | 3 cut(s) | 1248, 1444, 1609 |
| NspI | RCATGY | 2 cut(s) | 2266, 2423 |
| PaeR7I | CTCGAG | 2 cut(s) | 621, 1888 |
| PaqCI | CACCTGC | 1 cut(s) | 222 |
| PceI | AGGCCT | 1 cut(s) | 958 |
| PciI | ACATGT | 1 cut(s) | 2419 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1662 |
| PctI | GAATGC | 3 cut(s) | 439, 1666, 1861 |
| PfeI | GAWTC | 7 cut(s) | 416, 572, 1503, 1743, 2144, 2321, 2394 |
| PfoI | TCCNGGA | 2 cut(s) | 1483, 1713 |
| PkrI | GCNGC | 6 cut(s) | 384, 619, 901, 1155, 1453, 2461 |
| PleI | GAGTC | 7 cut(s) | 781, 1057, 1126, 1521, 1757, 2046, 2156 |
| PpsI | GAGTC | 7 cut(s) | 781, 1057, 1126, 1521, 1757, 2046, 2156 |
| PscI | ACATGT | 1 cut(s) | 2419 |
| PshBI | ATTAAT | 1 cut(s) | 1701 |
| Psp6I | CCWGG | 3 cut(s) | 550, 562, 2059 |
| PspFI | CCCAGC | 1 cut(s) | 887 |
| PspGI | CCWGG | 3 cut(s) | 550, 562, 2059 |
| PspN4I | GGNNCC | 7 cut(s) | 269, 692, 707, 795, 815, 1397, 2047 |
| PspPI | GGNCC | 4 cut(s) | 566, 813, 890, 1841 |
| PspXI | VCTCGAGB | 1 cut(s) | 621 |
| PstNI | CAGNNNCTG | 1 cut(s) | 527 |
| PsuI | RGATCY | 4 cut(s) | 666, 1786, 2063, 2094 |
| PvuII | CAGCTG | 1 cut(s) | 92 |
| RsaI | GTAC | 6 cut(s) | 77, 86, 1645, 1782, 1810, 2169 |
| RsaNI | GTAC | 6 cut(s) | 76, 85, 1644, 1781, 1809, 2168 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1251, 2193 |
| SalI | GTCGAC | 1 cut(s) | 153 |
| SatI | GCNGC | 6 cut(s) | 383, 618, 900, 1154, 1452, 2460 |
| Sau96I | GGNCC | 4 cut(s) | 566, 813, 890, 1841 |
| SchI | GAGTC | 7 cut(s) | 781, 1058, 1127, 1522, 1758, 2047, 2156 |
| ScrFI | CCNGG | 7 cut(s) | 552, 564, 731, 1485, 1648, 1715, 2061 |
| SduI | GDGCHC | 2 cut(s) | 1341, 2048 |
| SfcI | CTRYAG | 2 cut(s) | 519, 700 |
| Sfr274I | CTCGAG | 2 cut(s) | 621, 1888 |
| SinI | GGWCC | 3 cut(s) | 566, 813, 1841 |
| SlaI | CTCGAG | 2 cut(s) | 621, 1888 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1251, 2193 |
| SmlI | CTYRAG | 6 cut(s) | 110, 621, 1007, 1596, 1882, 1888 |
| SmoI | CTYRAG | 6 cut(s) | 110, 621, 1007, 1596, 1882, 1888 |
| Sse9I | AATT | 6 cut(s) | 161, 1106, 1312, 1542, 1916, 2051 |
| SseBI | AGGCCT | 1 cut(s) | 958 |
| SspI | AATATT | 2 cut(s) | 193, 1306 |
| SspMI | CTAG | 9 cut(s) | 141, 939, 1532, 1562, 1814, 1827, 1878, 2258, 2267 |
| StuI | AGGCCT | 1 cut(s) | 958 |
| StyD4I | CCNGG | 7 cut(s) | 550, 562, 729, 1483, 1646, 1713, 2059 |
| StyI | CCWWGG | 3 cut(s) | 513, 1327, 1347 |
| TaaI | ACNGT | 8 cut(s) | 26, 44, 309, 394, 701, 1808, 2022, 2111 |
| TaiI | ACGT | 3 cut(s) | 81, 776, 2002 |
| TaqII | GACCGA | 1 cut(s) | 1829 |
| TasI | AATT | 6 cut(s) | 161, 1106, 1312, 1542, 1916, 2051 |
| TatI | WGTACW | 1 cut(s) | 1780 |
| TfiI | GAWTC | 7 cut(s) | 416, 572, 1503, 1743, 2144, 2321, 2394 |
| TscAI | CASTG | 4 cut(s) | 43, 1513, 2096, 2235 |
| TseFI | GTSAC | 5 cut(s) | 38, 424, 695, 1223, 1614 |
| TseI | GCWGC | 6 cut(s) | 382, 617, 899, 1153, 1451, 2459 |
| Tsp45I | GTSAC | 5 cut(s) | 38, 424, 695, 1223, 1614 |
| TspDTI | ATGAA | 8 cut(s) | 62, 314, 389, 572, 668, 2224, 2334, 2445 |
| TspGWI | ACGGA | 3 cut(s) | 140, 158, 683 |
| TspRI | CASTG | 4 cut(s) | 43, 1513, 2096, 2235 |
| VpaK11BI | GGWCC | 3 cut(s) | 566, 813, 1841 |
| VspI | ATTAAT | 1 cut(s) | 1701 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 512 |
| XbaI | TCTAGA | 1 cut(s) | 2257 |
| XceI | RCATGY | 2 cut(s) | 2266, 2423 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1121 |
| XhoI | CTCGAG | 2 cut(s) | 621, 1888 |
| XmiI | GTMKAC | 3 cut(s) | 120, 154, 1238 |
| XspI | CTAG | 9 cut(s) | 141, 939, 1532, 1562, 1814, 1827, 1878, 2258, 2267 |
| Zsp2I | ATGCAT | 3 cut(s) | 1248, 1444, 1609 |