Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0010684

Physical Location & Seq

Genomic Coordinates Forward (+)

9942027 .. 9946520

Gene Structure 4494 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g11330.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGCCATGGCGGTGGCTCACCACAGAGAGAGCAGCAGTGGGAGCAGTATAAACAAGCACCTCGATGCCGGAAAATATGTACGGTACACATCCGAGCAAGTTGAAGCTCTTGAGAGAGTCTACGCCGAGTGCCCGAAGCCGAGCTCTCTGCGCAGGCAACAGTTGATCCGGGAGTGCCCCATTTTATCAAACATTGAGCCCAGACAGATCAAGGTCTGGTTCCAGAACCGCAGGTGTAGGGAGAAGCAGAGAAAAGAGTCCTCAAGACTGCAGACTGTAAACAGAAAATTATCGGCAATGAACAAACTGCTGATGGAGGAAAATTTGATCGAGATCGATCGATTGCAGAAACAGGTCTCTCAGCTTGTTTGTGAAAATGGATATATGCGCCAACAATTGCATACTGCATCAGCTGCAACTACTGATGCAAGCTGCGACTCTGTGGTGACAACTCCTCAGCATTCTCTCAGAGATGCTAATAACCCTGCAGGACTCCTATCCGTAGCGGAGGAGACATTGGCAGAGTTCCTATCCAAGGCTACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGCAGTGGAGTAGCAGCAAGAGCCTGCGGCCTTGTAAGTTTAGAGCCTACGAAGATTGCAGAGATCCTTAAAGATCGTCCATCTTGGTTCCGGGACTGTCGGAGCCTTGAAGTTTTTACAATGTTTACAGCTGGAAATGGAGGAACTATAGAACTTATATATACACAGACATATGCTCCAACTACATTGGCTCCTGCAAGGGATTTTTGGACCCTAAGATACACTACAACTTTAGACAATGGCAGTTTTGTGGTGTGTGAAAGATCTCTTTCCGGTTCTGGTGCTGGCCCAAATCCTGCTTCTGCTTCACAGTTTGTTAGAGGCGCGATGCTTCCTAGTGGTTATCTGATTCGACCATGTGAGGGTGGAGGATCAATCGTTCATATTGTTGACCACCTGAATCTTGAGGCATGGAGTGTGCCAGAGGTGCTGAGACCGCTTTATGAATCGTCTAAAGTGGTAGCACAAAGAATGACTATTGCTGCGTTGCGCTATATCAGACAAATAGCTGAAGAGACAAGTGGTGAAGTGGTATACAGTTTGGGCAGGCAGCCAGCTGTTCTGCGAACTTTTAGCCAAAGATTGATCAGAGGCTTCAATGATGCTGTCAATGGATTCAATGATGATGGATGGTCATTGGTCAACTGTGATGGTGCTGACGATGTTATAATTGCAGTCAATTCAACTAAGAATCTAACTTCTACCTCGAACCATGCCAATTCCCTTGCATTACTTGGAGGTGTTCTCTGTGCAAAGGCTTCCATGTTACTACAAAATGTGCCCCCTGCTGTTCTTGTTCGTTTCTTAAGGGAGCACCGTTCAGAGTGGGCAGATTTCAATGTTGATGCCTACTCCGCCGTATCTATGAAAGCAGGTGCGTATGCTTATCCTGGGATGAGGCCGACAAGGTTTACCGGGGGACAAATTATCATGCCACTTGGCCACACAATTGAACAAGAAGAGTTGCTTGAAGTTGTTCGACTTGAAGGCCATTCTCTCACTCAAGAGGATGCTTTTGCATCAAGGGACATTCATCTCTTGCAGATATGTAGTGGAGTTGATGAGAATGCTGTCGGAGCCTGCTCTGAGCTTGTTTTCGCTCCAATTGACGAGATGTTTCCAGATGATGCTCCATTGCTTCCCTCTGGTTTCCGTATTATCCCACTGGATTCAAAAACAGGTGATTCAAAGGATACTTTGAATACACATCGAACATTAGATCTGACATCCAGTCTTGAAGTGGGCTCAACAACGAGCAATGCAGCTGGAGAGCTTACTACATTTCACAATACACAGATCGATCAGTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009798 GO:0009799 GO:0009855 GO:0009888 GO:0009889 GO:0009933 GO:0009943 GO:0009944 GO:0009955 GO:0009956 GO:0009987 GO:0010014 GO:0010051 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048507 GO:0048532 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065001 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox MEKHLA START

Protein Analysis

645

Amino Acids

70.57

Weight (kDa)

5.77

Isoelectric Point (pI)

45.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60690
fragaria_vesca	FvH4_3g32190 FvH4_3g32190 FvH4_3g32190 FvH4_3g32190
malus_domestica	MD03G1118500.v1.1 MD11G1136800.v1.1
prunus_persica	Prupe.6G102300_v2.0.a1
pyrus_communis	pycom11g11330
rosa_chinensis	RchiOBHm_Chr5g0058801
rosa_laevigata	RLG00000035251
rosa_multiflora	Rmu_sc0005911.1_g000011 Rmu_sc0041020.1_g000002
rosa_roxburghii	Rroxscaffold_1G00021600
rosa_rugosa	Rorug05G0319200
rosa_samantha	Rh5AG384000 Rh5BG395900 Rh5CG419800 Rh5DG411600
rosa_wichuraiana	Rw5G036180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1292
AarI	CACCTGC	2 cut(s)	222, 1487
Acc16I	TGCGCA	1 cut(s)	152
Acc36I	ACCTGC	2 cut(s)	222, 1487
AccI	GTMKAC	2 cut(s)	120, 1158
AccII	CGCG	1 cut(s)	950
AccIII	TCCGGA	1 cut(s)	589
AciI	CCGC	6 cut(s)	11, 229, 506, 651, 1061, 1479
AclWI	GGATC	4 cut(s)	160, 611, 682, 1003
AcoI	YGGCCR	2 cut(s)	3, 1564
AcsI	RAATTY	1 cut(s)	322
AcuI	CTGAAG	1 cut(s)	1155
AfaI	GTAC	2 cut(s)	81, 86
AfiI	CCNNNNNNNGG	2 cut(s)	535, 986
AflII	CTTAAG	1 cut(s)	1429
AhdI	GACNNNNNGTC	1 cut(s)	1854
AjnI	CCWGG	3 cut(s)	571, 583, 1513
AjuI	GAANNNNNNNTTGG	2 cut(s)	907, 939
AloI	GAACNNNNNNTCC	2 cut(s)	987, 1019
Alw21I	GWGCWC	2 cut(s)	146, 1440
Alw26I	GTCTC	4 cut(s)	361, 506, 1051, 1133
AlwI	GGATC	4 cut(s)	160, 611, 682, 1003
AlwNI	CAGNNNCTG	1 cut(s)	548
Aor13HI	TCCGGA	1 cut(s)	589
AoxI	GGCC	6 cut(s)	3, 652, 910, 1523, 1564, 1612
ApeKI	GCWGC	7 cut(s)	33, 413, 432, 638, 1106, 1174, 1886
ApoI	RAATTY	1 cut(s)	322
Asp700I	GAANNNNTTC	1 cut(s)	1599
AspLEI	GCGC	4 cut(s)	153, 390, 950, 1116
AspS9I	GGNCC	4 cut(s)	562, 587, 834, 911
AsuC2I	CCSGG	3 cut(s)	170, 716, 1540
AsuHPI	GGTGA	4 cut(s)	11, 457, 1160, 1817
AvaII	GGWCC	3 cut(s)	562, 587, 834
BaeGI	GKGCMC	3 cut(s)	134, 179, 1407
BalI	TGGCCA	2 cut(s)	5, 1566
BanII	GRGCYC	3 cut(s)	146, 201, 1871
Bbv12I	GWGCWC	2 cut(s)	146, 1440
BbvCI	CCTCAGC	1 cut(s)	456
BbvI	GCAGC	7 cut(s)	45, 400, 419, 650, 1093, 1186, 1898
BccI	CCATC	5 cut(s)	307, 712, 1244, 1248, 1268
BceAI	ACGGC	1 cut(s)	1466
BcgI	CGANNNNNNTGC	2 cut(s)	130, 164
BciT130I	CCWGG	3 cut(s)	573, 585, 1515
BciVI	GTATCC	1 cut(s)	1810
BclI	TGATCA	1 cut(s)	1209
BcnI	CCSGG	3 cut(s)	170, 716, 1540
BcoDI	GTCTC	4 cut(s)	361, 506, 1051, 1133
BfaI	CTAG	1 cut(s)	960
BfmI	CTRYAG	4 cut(s)	269, 486, 540, 771
BfrI	CTTAAG	1 cut(s)	1429
BfuAI	ACCTGC	2 cut(s)	222, 1487
BfuI	GTATCC	1 cut(s)	1810
BglII	AGATCT	2 cut(s)	887, 1843
BisI	GCNGC	8 cut(s)	34, 414, 433, 639, 652, 1107, 1175, 1887
BlsI	GCNGC	8 cut(s)	35, 415, 434, 640, 653, 1108, 1176, 1888
Bme1390I	CCNGG	6 cut(s)	170, 573, 585, 716, 1515, 1540
Bme18I	GGWCC	3 cut(s)	562, 587, 834
BmeRI	GACNNNNNGTC	1 cut(s)	1854
BmgT120I	GGNCC	4 cut(s)	562, 587, 834, 911
BmiI	GGNNCC	7 cut(s)	221, 563, 713, 728, 816, 836, 1702
BmrFI	CCNGG	6 cut(s)	170, 573, 585, 716, 1515, 1540
BplI	GAGNNNNNCTC	2 cut(s)	1353, 1385
BpmI	CTGGAG	1 cut(s)	1911
Bpu10I	CCTNAGC	1 cut(s)	456
BpuEI	CTTGAG	4 cut(s)	131, 247, 1049, 1611
BpuMI	CCSGG	3 cut(s)	170, 716, 1540
Bsa29I	ATCGAT	3 cut(s)	336, 340, 1923
BsaBI	GATNNNNATC	1 cut(s)	332
BsaI	GGTCTC	2 cut(s)	361, 1051
BsaJI	CCNNGG	5 cut(s)	6, 534, 572, 1514, 1539
BsaWI	WCCGGW	2 cut(s)	589, 896
BsaXI	ACNNNNNCTCC	4 cut(s)	784, 799, 814, 829
Bsc4I	CCNNNNNNNGG	2 cut(s)	535, 986
Bse1I	ACTGG	2 cut(s)	1794, 1854
Bse3DI	GCAATG	3 cut(s)	303, 1757, 1888
Bse8I	GATNNNNATC	1 cut(s)	332
BseAI	TCCGGA	1 cut(s)	589
BseBI	CCWGG	3 cut(s)	573, 585, 1515
BseCI	ATCGAT	3 cut(s)	336, 340, 1923
BseDI	CCNNGG	5 cut(s)	6, 534, 572, 1514, 1539
BseGI	GGATG	6 cut(s)	89, 582, 1259, 1524, 1639, 1850
BseJI	GATNNNNATC	1 cut(s)	332
BseLI	CCNNNNNNNGG	2 cut(s)	535, 986
BseMI	GCAATG	3 cut(s)	303, 1757, 1888
BseMII	CTCAG	5 cut(s)	374, 470, 481, 1046, 1701
BseNI	ACTGG	2 cut(s)	1794, 1854
BseRI	GAGGAG	2 cut(s)	444, 524
BseSI	GKGCMC	3 cut(s)	134, 179, 1407
BseXI	GCAGC	7 cut(s)	45, 400, 419, 650, 1093, 1186, 1898
Bsh1236I	CGCG	1 cut(s)	950
Bsh1285I	CGRYCG	1 cut(s)	340
BshFI	GGCC	6 cut(s)	5, 654, 912, 1525, 1566, 1614
BshVI	ATCGAT	3 cut(s)	336, 340, 1923
BsiEI	CGRYCG	1 cut(s)	340
BsiHKAI	GWGCWC	2 cut(s)	146, 1440
BsiSI	CCGG	6 cut(s)	69, 169, 590, 715, 897, 1539
BslFI	GGGAC	3 cut(s)	731, 1557, 1664
BslI	CCNNNNNNNGG	2 cut(s)	535, 986
BsmAI	GTCTC	4 cut(s)	361, 506, 1051, 1133
BsmFI	GGGAC	3 cut(s)	731, 1557, 1664
BsmI	GAATGC	2 cut(s)	460, 1696
BsnI	GGCC	6 cut(s)	5, 654, 912, 1525, 1566, 1614
Bso31I	GGTCTC	2 cut(s)	361, 1051
Bsp1286I	GDGCHC	7 cut(s)	134, 146, 179, 201, 1407, 1440, 1871
Bsp13I	TCCGGA	1 cut(s)	589
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	6 cut(s)	11, 229, 506, 651, 1061, 1479
BspANI	GGCC	6 cut(s)	5, 654, 912, 1525, 1566, 1614
BspCNI	CTCAG	5 cut(s)	373, 469, 480, 1047, 1702
BspDI	ATCGAT	3 cut(s)	336, 340, 1923
BspEI	TCCGGA	1 cut(s)	589
BspFNI	CGCG	1 cut(s)	950
BspLI	GGNNCC	7 cut(s)	221, 563, 713, 728, 816, 836, 1702
BspMAI	CTGCAG	2 cut(s)	273, 490
BspMI	ACCTGC	2 cut(s)	222, 1487
BspPI	GGATC	4 cut(s)	160, 611, 682, 1003
BspTI	CTTAAG	1 cut(s)	1429
BspTNI	GGTCTC	2 cut(s)	361, 1051
BsrDI	GCAATG	3 cut(s)	303, 1757, 1888
BsrI	ACTGG	2 cut(s)	1794, 1854
BssECI	CCNNGG	5 cut(s)	6, 534, 572, 1514, 1539
BssNAI	GTATAC	1 cut(s)	1159
BssT1I	CCWWGG	2 cut(s)	6, 534
Bst1107I	GTATAC	1 cut(s)	1159
Bst2UI	CCWGG	3 cut(s)	573, 585, 1515
Bst4CI	ACNGT	8 cut(s)	84, 162, 277, 722, 936, 1163, 1271, 1442
Bst6I	CTCTTC	2 cut(s)	1131, 1578
BstAFI	CTTAAG	1 cut(s)	1429
BstAPI	GCANNNNNTGC	1 cut(s)	413
BstC8I	GCNNGC	7 cut(s)	155, 430, 649, 910, 1172, 1179, 1705
BstDEI	CTNAG	7 cut(s)	360, 456, 467, 839, 1055, 1311, 1710
BstDSI	CCRYGG	1 cut(s)	6
BstENI	CCTNNNNNAGG	1 cut(s)	533
BstF5I	GGATG	6 cut(s)	89, 582, 1259, 1524, 1639, 1850
BstFNI	CGCG	1 cut(s)	950
BstHHI	GCGC	4 cut(s)	153, 390, 950, 1116
BstMAI	GTCTC	4 cut(s)	361, 506, 1051, 1133
BstMCI	CGRYCG	1 cut(s)	340
BstMWI	GCNNNNNNNGC	8 cut(s)	42, 150, 413, 644, 1051, 1060, 1478, 1700
BstNI	CCWGG	3 cut(s)	573, 585, 1515
BstSCI	CCNGG	6 cut(s)	168, 571, 583, 714, 1513, 1538
BstSFI	CTRYAG	4 cut(s)	269, 486, 540, 771
BstSLI	GKGCMC	3 cut(s)	134, 179, 1407
BstUI	CGCG	1 cut(s)	950
BstV1I	GCAGC	7 cut(s)	45, 400, 419, 650, 1093, 1186, 1898
BstX2I	RGATCY	4 cut(s)	603, 687, 887, 1843
BstXI	CCANNNNNNTGG	2 cut(s)	13, 572
BstYI	RGATCY	4 cut(s)	603, 687, 887, 1843
BstZ17I	GTATAC	1 cut(s)	1159
Bsu15I	ATCGAT	3 cut(s)	336, 340, 1923
BsuI	GTATCC	1 cut(s)	1810
BsuRI	GGCC	6 cut(s)	5, 654, 912, 1525, 1566, 1614
BsuTUI	ATCGAT	3 cut(s)	336, 340, 1923
BtgI	CCRYGG	1 cut(s)	6
BtgZI	GCGATG	1 cut(s)	965
BtsCI	GGATG	6 cut(s)	89, 582, 1259, 1524, 1639, 1850
BtsI	GCAGTG	2 cut(s)	43, 634
BtsIMutI	CAGTG	3 cut(s)	43, 634, 1787
BveI	ACCTGC	2 cut(s)	222, 1487
Cac8I	GCNNGC	7 cut(s)	155, 430, 649, 910, 1172, 1179, 1705
CaiI	CAGNNNCTG	1 cut(s)	548
CfoI	GCGC	4 cut(s)	153, 390, 950, 1116
Cfr13I	GGNCC	4 cut(s)	562, 587, 834, 911
ClaI	ATCGAT	3 cut(s)	336, 340, 1923
Csp6I	GTAC	2 cut(s)	80, 85
CviAII	CATG	6 cut(s)	7, 981, 1035, 1337, 1387, 1555
CviQI	GTAC	2 cut(s)	80, 85
DdeI	CTNAG	7 cut(s)	360, 456, 467, 839, 1055, 1311, 1710
DriI	GACNNNNNGTC	1 cut(s)	1854
EaeI	YGGCCR	2 cut(s)	3, 1564
Eam1104I	CTCTTC	2 cut(s)	1131, 1578
Eam1105I	GACNNNNNGTC	1 cut(s)	1854
EarI	CTCTTC	2 cut(s)	1131, 1578
EciI	GGCGGA	1 cut(s)	1468
Ecl136II	GAGCTC	1 cut(s)	144
Eco130I	CCWWGG	2 cut(s)	6, 534
Eco24I	GRGCYC	3 cut(s)	146, 201, 1871
Eco31I	GGTCTC	2 cut(s)	361, 1051
Eco47I	GGWCC	3 cut(s)	562, 587, 834
Eco53kI	GAGCTC	1 cut(s)	144
Eco57I	CTGAAG	1 cut(s)	1155
EcoICRI	GAGCTC	1 cut(s)	144
EcoNI	CCTNNNNNAGG	1 cut(s)	533
EcoRII	CCWGG	3 cut(s)	571, 583, 1513
EcoT14I	CCWWGG	2 cut(s)	6, 534
EcoT38I	GRGCYC	3 cut(s)	146, 201, 1871
ErhI	CCWWGG	2 cut(s)	6, 534
FaeI	CATG	6 cut(s)	10, 984, 1038, 1340, 1390, 1558
FalI	AAGNNNNNCTT	2 cut(s)	1575, 1607
FaqI	GGGAC	3 cut(s)	731, 1557, 1664
FatI	CATG	6 cut(s)	6, 980, 1034, 1336, 1386, 1554
FauNDI	CATATG	1 cut(s)	796
FbaI	TGATCA	1 cut(s)	1209
FblI	GTMKAC	2 cut(s)	120, 1158
Fnu4HI	GCNGC	8 cut(s)	34, 414, 433, 639, 652, 1107, 1175, 1887
FokI	GGATG	6 cut(s)	76, 589, 1266, 1531, 1646, 1837
FriOI	GRGCYC	3 cut(s)	146, 201, 1871
Fsp4HI	GCNGC	8 cut(s)	34, 414, 433, 639, 652, 1107, 1175, 1887
FspBI	CTAG	1 cut(s)	960
FspI	TGCGCA	1 cut(s)	152
GlaI	GCGC	4 cut(s)	152, 389, 949, 1115
GluI	GCNGC	8 cut(s)	34, 414, 433, 639, 652, 1107, 1175, 1887
GsuI	CTGGAG	1 cut(s)	1911
HaeIII	GGCC	6 cut(s)	5, 654, 912, 1525, 1566, 1614
HapII	CCGG	6 cut(s)	69, 169, 590, 715, 897, 1539
HhaI	GCGC	4 cut(s)	153, 390, 950, 1116
Hin1II	CATG	6 cut(s)	10, 984, 1038, 1340, 1390, 1558
Hin6I	GCGC	4 cut(s)	151, 388, 948, 1114
HinP1I	GCGC	4 cut(s)	151, 388, 948, 1114
HincII	GTYRAC	2 cut(s)	1015, 1267
HindII	GTYRAC	2 cut(s)	1015, 1267
HpaII	CCGG	6 cut(s)	69, 169, 590, 715, 897, 1539
HphI	GGTGA	4 cut(s)	11, 457, 1160, 1817
Hpy166II	GTNNAC	8 cut(s)	87, 121, 280, 750, 1015, 1159, 1267, 1536
Hpy8I	GTNNAC	8 cut(s)	87, 121, 280, 750, 1015, 1159, 1267, 1536
HpyAV	CCTTC	1 cut(s)	1604
HpyCH4III	ACNGT	8 cut(s)	84, 162, 277, 722, 936, 1163, 1271, 1442
HpyF10VI	GCNNNNNNNGC	8 cut(s)	42, 150, 413, 644, 1051, 1060, 1478, 1700
HpyF3I	CTNAG	7 cut(s)	360, 456, 467, 839, 1055, 1311, 1710
Hsp92II	CATG	6 cut(s)	10, 984, 1038, 1340, 1390, 1558
HspAI	GCGC	4 cut(s)	151, 388, 948, 1114
Kpn2I	TCCGGA	1 cut(s)	589
Ksp22I	TGATCA	1 cut(s)	1209
LmnI	GCTCC	8 cut(s)	42, 726, 805, 820, 1435, 1700, 1729, 1759
Lsp1109I	GCAGC	7 cut(s)	45, 400, 419, 650, 1093, 1186, 1898
MaeI	CTAG	1 cut(s)	960
MaeIII	GTNAC	2 cut(s)	445, 1389
MboII	GAAGA	3 cut(s)	688, 1148, 1595
MfeI	CAATTG	3 cut(s)	395, 1572, 1728
MflI	RGATCY	4 cut(s)	603, 687, 887, 1843
MhlI	GDGCHC	7 cut(s)	134, 146, 179, 201, 1407, 1440, 1871
MlsI	TGGCCA	2 cut(s)	5, 1566
MluCI	AATT	9 cut(s)	287, 322, 395, 1293, 1303, 1342, 1548, 1572, 1728
MluNI	TGGCCA	2 cut(s)	5, 1566
MlyI	GAGTC	4 cut(s)	126, 266, 431, 486
MmeI	TCCRAC	3 cut(s)	704, 827, 1678
Mox20I	TGGCCA	2 cut(s)	5, 1566
MroI	TCCGGA	1 cut(s)	589
MroXI	GAANNNNTTC	1 cut(s)	1599
MscI	TGGCCA	2 cut(s)	5, 1566
MseI	TTAA	2 cut(s)	693, 1430
MslI	CAYNNNNRTG	2 cut(s)	11, 63
Msp20I	TGGCCA	2 cut(s)	5, 1566
MspA1I	CMGCKG	4 cut(s)	413, 755, 1181, 1889
MspCI	CTTAAG	1 cut(s)	1429
MspI	CCGG	6 cut(s)	69, 169, 590, 715, 897, 1539
MspR9I	CCNGG	6 cut(s)	170, 573, 585, 716, 1515, 1540
MunI	CAATTG	3 cut(s)	395, 1572, 1728
Mva1269I	GAATGC	2 cut(s)	460, 1696
MvaI	CCWGG	3 cut(s)	573, 585, 1515
MvnI	CGCG	1 cut(s)	950
MwoI	GCNNNNNNNGC	8 cut(s)	42, 150, 413, 644, 1051, 1060, 1478, 1700
NciI	CCSGG	3 cut(s)	170, 716, 1540
NcoI	CCATGG	1 cut(s)	6
NdeI	CATATG	1 cut(s)	796
NlaIII	CATG	6 cut(s)	10, 984, 1038, 1340, 1390, 1558
NlaIV	GGNNCC	7 cut(s)	221, 563, 713, 728, 816, 836, 1702
NmeAIII	GCCGAG	2 cut(s)	151, 165
NmuCI	GTSAC	1 cut(s)	445
NsbI	TGCGCA	1 cut(s)	152
PaqCI	CACCTGC	2 cut(s)	222, 1487
PctI	GAATGC	2 cut(s)	460, 1696
PdmI	GAANNNNTTC	1 cut(s)	1599
PfeI	GAWTC	8 cut(s)	593, 973, 1024, 1070, 1239, 1315, 1793, 1808
PfoI	TCCNGGA	2 cut(s)	168, 714
PkrI	GCNGC	8 cut(s)	35, 415, 434, 640, 653, 1108, 1176, 1888
Ple19I	CGATCG	1 cut(s)	340
PleI	GAGTC	4 cut(s)	125, 265, 431, 486
PpsI	GAGTC	4 cut(s)	125, 265, 431, 486
PsiI	TTATAA	1 cut(s)	1292
Psp124BI	GAGCTC	1 cut(s)	146
Psp6I	CCWGG	3 cut(s)	571, 583, 1513
PspGI	CCWGG	3 cut(s)	571, 583, 1513
PspN4I	GGNNCC	7 cut(s)	221, 563, 713, 728, 816, 836, 1702
PspPI	GGNCC	4 cut(s)	562, 587, 834, 911
PstI	CTGCAG	2 cut(s)	273, 490
PstNI	CAGNNNCTG	1 cut(s)	548
PsuI	RGATCY	4 cut(s)	603, 687, 887, 1843
PvuI	CGATCG	1 cut(s)	340
PvuII	CAGCTG	4 cut(s)	413, 755, 1181, 1889
RsaI	GTAC	2 cut(s)	81, 86
RsaNI	GTAC	2 cut(s)	80, 85
RseI	CAYNNNNRTG	2 cut(s)	11, 63
SacI	GAGCTC	1 cut(s)	146
SaqAI	TTAA	2 cut(s)	693, 1430
SatI	GCNGC	8 cut(s)	34, 414, 433, 639, 652, 1107, 1175, 1887
Sau96I	GGNCC	4 cut(s)	562, 587, 834, 911
SbfI	CCTGCAGG	1 cut(s)	490
SchI	GAGTC	4 cut(s)	126, 266, 431, 486
ScrFI	CCNGG	6 cut(s)	170, 573, 585, 716, 1515, 1540
SdaI	CCTGCAGG	1 cut(s)	490
SduI	GDGCHC	7 cut(s)	134, 146, 179, 201, 1407, 1440, 1871
SfcI	CTRYAG	4 cut(s)	269, 486, 540, 771
SinI	GGWCC	3 cut(s)	562, 587, 834
SmiMI	CAYNNNNRTG	2 cut(s)	11, 63
SmlI	CTYRAG	5 cut(s)	110, 262, 1028, 1429, 1626
SmoI	CTYRAG	5 cut(s)	110, 262, 1028, 1429, 1626
Sse8387I	CCTGCAGG	1 cut(s)	490
Sse9I	AATT	9 cut(s)	287, 322, 395, 1293, 1303, 1342, 1548, 1572, 1728
SsiI	CCGC	6 cut(s)	11, 229, 506, 651, 1061, 1479
SspMI	CTAG	1 cut(s)	960
SstI	GAGCTC	1 cut(s)	146
StyD4I	CCNGG	6 cut(s)	168, 571, 583, 714, 1513, 1538
StyI	CCWWGG	2 cut(s)	6, 534
TaaI	ACNGT	8 cut(s)	84, 162, 277, 722, 936, 1163, 1271, 1442
TaqI	TCGA	9 cut(s)	63, 330, 336, 340, 976, 1331, 1603, 1834, 1923
TasI	AATT	9 cut(s)	287, 322, 395, 1293, 1303, 1342, 1548, 1572, 1728
TauI	GCSGC	1 cut(s)	654
TfiI	GAWTC	8 cut(s)	593, 973, 1024, 1070, 1239, 1315, 1793, 1808
Tru1I	TTAA	2 cut(s)	693, 1430
Tru9I	TTAA	2 cut(s)	693, 1430
TscAI	CASTG	3 cut(s)	43, 634, 1794
TseFI	GTSAC	1 cut(s)	445
TseI	GCWGC	7 cut(s)	33, 413, 432, 638, 1106, 1174, 1886
Tsp45I	GTSAC	1 cut(s)	445
TspDTI	ATGAA	6 cut(s)	314, 593, 995, 1083, 1505, 1646
TspGWI	ACGGA	2 cut(s)	490, 1766
TspRI	CASTG	3 cut(s)	43, 634, 1794
Vha464I	CTTAAG	1 cut(s)	1429
VpaK11BI	GGWCC	3 cut(s)	562, 587, 834
XagI	CCTNNNNNAGG	1 cut(s)	533
XapI	RAATTY	1 cut(s)	322
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1861
XmiI	GTMKAC	2 cut(s)	120, 1158
XmnI	GAANNNNTTC	1 cut(s)	1599
XspI	CTAG	1 cut(s)	960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.