Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0010684

Physical Location & Seq

Genomic Coordinates Reverse (-)

27429589 .. 27436778

Gene Structure 7190 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g32190.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

ATGGCGATGGCTGTGGCTCATCATCAGCACAGGGAGAGTAGCAGTGGTAGTAGTATAAACAAGCATCTTAATGATGCTGGGAAATATGTGCGTTACACTTCTGAGCAAGTTGAGGCTCTTGAACGAGTCTATGCCGAGTGCCCGAAGCCGAGTTCTTTGAGAAGGCAGCAGTTGATCCGAGACTGCCCCATTCTTTCGAATATAGAGCCAAAGCAGATCAAAGTCTGGTTTCAGAACCGCAGATGTCGAGAAAAACAGAGAAAAGAGTCTTCGAGGCTTCAGACTGTTAACAGGAAATTATCAGCAATGAATAAGCTGCTTATGGAGGAGAATGATCGACTGCAAAAACAGGTGTCTCAGCTTGTTTGTGAGAATGGGTACATGCGCCAGCAGCTGCATACTGCACCAGCAACTGATGCAAGCTGCGACTCTGTGGTTACAACTCCTCAGCATTCTCTCAGAGATGCTAATAATCCTGCTGGACTCCTCTCCATAGCGGAGGAGACCTTGGCAGAGTTCCTTTCTAAGGCTACAGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCAGTTGGGATCTTTGCTATTTCACAAAGTTGCAGTGGAGTGGCAGCTAGAGCCTGTGGTCTTGTAAGTTTAGAGCCTACGAAGATTGCAGAGATCCTTAAAGATCGTCCATCTTGGTTCCGGGACTGTCGGAGCCTCGAAGTCTTTACTATGTTTCCTGCTGGAAACGGAGGGACTATAGAACTCATATATACTCAGACATATGCTCCAACTACACTGGCTCCTGCAAGGGATTTTTGGACCCTAAGATACACTACTAGTTTAGACAATGGCAGTTTCGTGGTCTGTGAGAGATCGCTTTCTGGTTCTGGTGCTGGTCCCAGTGGAGCTTCTGCTGCCCAGTTTGTTAGAGCTGAAATGCTTCCTAGTGGTTATCTGATTCGACCATGTGAGGGTGGAGGATCAATTATTCATATTGTTGACCACCTGAACCTTGAGGCTTGGAGTGTGCCAGAAGTGCTGCGACCGCTTTATGAATCGTCCAAAGTTGTTGCACAAAAAAGGACTATTGCGGCATTGCGTTACATCAGGCAAATAGCTCAGGAGACAAGTGGTGAAGTTGTCTACAGTTTGGGCAGGCAGCCCGCTGTTCTGCGAACTTTTAGCCAAAGATTAATCAGAGGCTTTAATGATGCTGTCAATGGATTTAATGATGATGGCTGGTCATTGATCAACTGTGATGGTGCTGAAGACATTATAATGGCCGTAAATTCAACCAAGAATTTGACTACTACGAATCCTGCTAATTCCTTTGCTTTTCTTGGTGGTATTCTGTGTGCAAAGGCTTCCATGCTACTCCAAAATGTTCCTCCAGCTGTCCTGGTTCGTTTCTTGAGGGAGCATCGTTCAGAGTGGGCTGATTTCAATGTTGATGCCTATTCTGCTGCATCTTTGAAATCTGGTTCATATGCGTACCCAGGGATGAGGCCAACAAGGTTTACTGGGGGCCAAATCATCATGCCACTTGGTCACACCATTGAACAAGAAGAGTTGCTTGAAGTTGTTCGTCTTGAAGGCCATTCTTTCTCACAAGAAGAAGCATTTGCATCACGGGACATTCATCTCTTACAGATATGTAGTGGAGTTGATGAGAATGCTGTTGGAGCCTGTTCAGAGCTTTTTTTTGCTCCAATTGATGAGATGTTTCCAGATGATGCTCCGTTGCTTCCCTCTGGTTTCCGCATTATTCCTTTGGAATCAAAAACAAGTGATTCAAAAGATGCCTTGGCTACACATCGTACATTAGATCTGACATCCAGTCTTGAAGTGGGCTCAACAACAAACCATAATGCTGGAGATTTGAATTCATTTCATAACACTCGATCAGTATTGACTATTGCCTTCCAGTTTCCGTTCGAGAGTAGTCTACAGGATAATGTTGCATCCATGGCACGCCAATACGTACGAAATGTCATCTCATCAGTGCAGAGAGTTGCGATGGCTATATCTCCATCAGGATTGAGTCCGTCCATGGGACCAAAACTATCTCCTGGCTCTCCAGAAGCTCTAACACTGGCTAACTGGATCTGCCAGAGCTATAGTTATCATTTAGGGGCAGAACTGCTGCAGCCAGATTCCTTGGGTGGTGACTCGATGTTAAAACATCTATGGCATCATCAAGATGCGATTTTGTGTTGTTCATTGAAGTCGGTGCCGGTTTTTATCTTTGCCAACCAGGCTGGGCTTGACATGCTAGAGACTACTCTTGTTGCTCTGCAGGACATCTCATTAGATAAGATATTTGATGAGTCTGGACGTAAGACATTGTGCACCGACTTCGCTAAACTGATGCAGCAGGGATTTGCTTACTTGCCAGCTGGGATTTGCATGTCTACAATGGGGCGCCATGTCTCATATGAACAAGCCATTGGATGGAAAGTTCTTTCTGGAGAAGACAATTCTGTTCATTGCCTTGCTTTCTCGTTTGTAAACTGGTCTTTTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009798 GO:0009799 GO:0009855 GO:0009888 GO:0009889 GO:0009933 GO:0009943 GO:0009944 GO:0009955 GO:0009956 GO:0009987 GO:0010014 GO:0010051 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048507 GO:0048532 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065001 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox MEKHLA START

Protein Analysis

844

Amino Acids

92.58

Weight (kDa)

5.99

Isoelectric Point (pI)

49.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	28 - 86	2.8e-15	Homeodomain
START	PF01852	165 - 373	2.9e-48	START domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60690
fragaria_vesca	FvH4_3g32190 FvH4_3g32190 FvH4_3g32190 FvH4_3g32190
malus_domestica	MD03G1118500.v1.1 MD11G1136800.v1.1
prunus_persica	Prupe.6G102300_v2.0.a1
pyrus_communis	pycom11g11330
rosa_chinensis	RchiOBHm_Chr5g0058801
rosa_laevigata	RLG00000035251
rosa_multiflora	Rmu_sc0005911.1_g000011 Rmu_sc0041020.1_g000002
rosa_roxburghii	Rroxscaffold_1G00021600
rosa_rugosa	Rorug05G0319200
rosa_samantha	Rh5AG384000 Rh5BG395900 Rh5CG419800 Rh5DG411600
rosa_wichuraiana	Rw5G036180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1283
AccB1I	GGYRCC	2 cut(s)	2236, 2427
AccB7I	CCANNNNNTGG	1 cut(s)	2457
AccI	GTMKAC	3 cut(s)	1149, 1951, 2417
AccIII	TCCGGA	1 cut(s)	580
AciI	CCGC	6 cut(s)	238, 497, 1052, 1097, 1170, 1765
AclWI	GGATC	5 cut(s)	169, 602, 673, 994, 2117
AcoI	YGGCCR	1 cut(s)	1287
AcsI	RAATTY	3 cut(s)	1294, 1306, 1888
AcuI	CTGAAG	2 cut(s)	263, 1293
AcyI	GRCGYC	1 cut(s)	2428
AfaI	GTAC	4 cut(s)	380, 1499, 1825, 1989
AfiI	CCNNNNNNNGG	4 cut(s)	526, 977, 2057, 2457
AhdI	GACNNNNNGTC	1 cut(s)	1842
AhlI	ACTAGT	1 cut(s)	842
AjnI	CCWGG	6 cut(s)	562, 574, 1404, 1501, 2074, 2259
AjuI	GAANNNNNNNTTGG	2 cut(s)	2436, 2468
AloI	GAACNNNNNNTCC	2 cut(s)	2448, 2480
Alw21I	GWGCWC	1 cut(s)	2357
Alw26I	GTCTC	6 cut(s)	174, 360, 497, 1124, 2276, 2440
Alw44I	GTGCAC	1 cut(s)	2353
AlwI	GGATC	5 cut(s)	169, 602, 673, 994, 2117
AlwNI	CAGNNNCTG	3 cut(s)	394, 413, 539
Aor13HI	TCCGGA	1 cut(s)	580
AoxI	GGCC	4 cut(s)	1287, 1511, 1531, 1600
ApaLI	GTGCAC	1 cut(s)	2353
ApoI	RAATTY	3 cut(s)	1294, 1306, 1888
AseI	ATTAAT	1 cut(s)	1199
Asp700I	GAANNNNTTC	2 cut(s)	945, 1587
AspLEI	GCGC	2 cut(s)	387, 2430
AspS9I	GGNCC	6 cut(s)	553, 578, 825, 902, 1531, 2060
AsuC2I	CCSGG	1 cut(s)	707
AsuHPI	GGTGA	2 cut(s)	1151, 2183
AsuII	TTCGAA	1 cut(s)	197
AvaII	GGWCC	5 cut(s)	553, 578, 825, 902, 2060
BaeGI	GKGCMC	2 cut(s)	143, 2357
BanI	GGYRCC	2 cut(s)	2236, 2427
BanII	GRGCYC	1 cut(s)	1859
BbsI	GAAGAC	3 cut(s)	261, 1281, 2484
Bbv12I	GWGCWC	1 cut(s)	2357
BbvCI	CCTCAGC	1 cut(s)	447
BccI	CCATC	6 cut(s)	703, 1235, 1259, 2017, 2044, 2451
BceAI	ACGGC	1 cut(s)	1274
BcgI	CGANNNNNNTGC	2 cut(s)	2344, 2378
BciT130I	CCWGG	6 cut(s)	564, 576, 1406, 1503, 2076, 2261
BclI	TGATCA	1 cut(s)	1254
BcnI	CCSGG	1 cut(s)	707
BcoDI	GTCTC	6 cut(s)	174, 360, 497, 1124, 2276, 2440
BcuI	ACTAGT	1 cut(s)	842
BfaI	CTAG	4 cut(s)	633, 843, 951, 2279
BfmI	CTRYAG	7 cut(s)	531, 762, 1150, 1952, 2122, 2150, 2300
BfoI	RGCGCY	1 cut(s)	2431
BglI	GCCNNNNNGGC	1 cut(s)	2261
BglII	AGATCT	1 cut(s)	1831
Bme1390I	CCNGG	7 cut(s)	564, 576, 707, 1406, 1503, 2076, 2261
Bme18I	GGWCC	5 cut(s)	553, 578, 825, 902, 2060
BmeRI	GACNNNNNGTC	1 cut(s)	1842
BmgT120I	GGNCC	6 cut(s)	553, 578, 825, 902, 1531, 2060
BmrFI	CCNGG	7 cut(s)	564, 576, 707, 1406, 1503, 2076, 2261
BmrI	ACTGGG	3 cut(s)	900, 919, 1536
BmuI	ACTGGG	3 cut(s)	900, 919, 1536
BpiI	GAAGAC	3 cut(s)	261, 1281, 2484
BpmI	CTGGAG	4 cut(s)	1380, 1899, 2067, 2493
Bpu10I	CCTNAGC	2 cut(s)	447, 1125
Bpu14I	TTCGAA	1 cut(s)	197
BpuEI	CTTGAG	2 cut(s)	1040, 1438
BpuMI	CCSGG	1 cut(s)	707
BsaAI	YACGTR	1 cut(s)	1987
BsaHI	GRCGYC	1 cut(s)	2428
BsaI	GGTCTC	1 cut(s)	497
BsaJI	CCNNGG	8 cut(s)	507, 563, 1501, 1502, 1809, 1971, 2055, 2163
BsaWI	WCCGGW	1 cut(s)	580
BsaXI	ACNNNNNCTCC	4 cut(s)	775, 790, 805, 820
Bsc4I	CCNNNNNNNGG	4 cut(s)	526, 977, 2057, 2457
Bse118I	RCCGGY	1 cut(s)	2239
Bse1I	ACTGG	9 cut(s)	807, 906, 925, 1531, 1842, 1930, 2103, 2111, 2522
Bse3DI	GCAATG	3 cut(s)	312, 1100, 2491
BseAI	TCCGGA	1 cut(s)	580
BseBI	CCWGG	6 cut(s)	564, 576, 1406, 1503, 2076, 2261
BseDI	CCNNGG	8 cut(s)	507, 563, 1501, 1502, 1809, 1971, 2055, 2163
BseGI	GGATG	5 cut(s)	573, 1512, 1838, 1967, 2462
BseLI	CCNNNNNNNGG	4 cut(s)	526, 977, 2057, 2457
BseMI	GCAATG	3 cut(s)	312, 1100, 2491
BseMII	CTCAG	6 cut(s)	93, 371, 461, 472, 794, 1139
BseNI	ACTGG	9 cut(s)	807, 906, 925, 1531, 1842, 1930, 2103, 2111, 2522
BseRI	GAGGAG	4 cut(s)	341, 435, 476, 515
BseSI	GKGCMC	2 cut(s)	143, 2357
BseYI	CCCAGC	3 cut(s)	77, 2264, 2402
BsgI	GTGCAG	2 cut(s)	387, 2030
Bsh1285I	CGRYCG	1 cut(s)	1052
BshFI	GGCC	4 cut(s)	1289, 1513, 1533, 1602
BshNI	GGYRCC	2 cut(s)	2236, 2427
BsiEI	CGRYCG	1 cut(s)	1052
BsiHKAI	GWGCWC	1 cut(s)	2357
BsiSI	CCGG	3 cut(s)	581, 706, 2240
BsiWI	CGTACG	1 cut(s)	1987
BslFI	GGGAC	5 cut(s)	722, 772, 888, 1652, 2073
BslI	CCNNNNNNNGG	4 cut(s)	526, 977, 2057, 2457
BsmAI	GTCTC	6 cut(s)	174, 360, 497, 1124, 2276, 2440
BsmFI	GGGAC	5 cut(s)	722, 772, 888, 1652, 2073
BsmI	GAATGC	2 cut(s)	451, 1684
BsnI	GGCC	4 cut(s)	1289, 1513, 1533, 1602
Bso31I	GGTCTC	1 cut(s)	497
Bsp119I	TTCGAA	1 cut(s)	197
Bsp1286I	GDGCHC	3 cut(s)	143, 1859, 2357
Bsp13I	TCCGGA	1 cut(s)	580
Bsp19I	CCATGG	2 cut(s)	1971, 2055
BspACI	CCGC	6 cut(s)	238, 497, 1052, 1097, 1170, 1765
BspANI	GGCC	4 cut(s)	1289, 1513, 1533, 1602
BspCNI	CTCAG	6 cut(s)	94, 370, 460, 471, 793, 1138
BspEI	TCCGGA	1 cut(s)	580
BspMAI	CTGCAG	2 cut(s)	2154, 2304
BspPI	GGATC	5 cut(s)	169, 602, 673, 994, 2117
BspT104I	TTCGAA	1 cut(s)	197
BspT107I	GGYRCC	2 cut(s)	2236, 2427
BspTNI	GGTCTC	1 cut(s)	497
BsrDI	GCAATG	3 cut(s)	312, 1100, 2491
BsrFI	RCCGGY	1 cut(s)	2239
BsrI	ACTGG	9 cut(s)	807, 906, 925, 1531, 1842, 1930, 2103, 2111, 2522
BssAI	RCCGGY	1 cut(s)	2239
BssECI	CCNNGG	8 cut(s)	507, 563, 1501, 1502, 1809, 1971, 2055, 2163
BssNI	GRCGYC	1 cut(s)	2428
BssT1I	CCWWGG	5 cut(s)	507, 1809, 1971, 2055, 2163
Bst2UI	CCWGG	6 cut(s)	564, 576, 1406, 1503, 2076, 2261
Bst4CI	ACNGT	4 cut(s)	286, 713, 1154, 1262
Bst6I	CTCTTC	1 cut(s)	1566
BstACI	GRCGYC	1 cut(s)	2428
BstAPI	GCANNNNNTGC	1 cut(s)	416
BstBAI	YACGTR	1 cut(s)	1987
BstBI	TTCGAA	1 cut(s)	197
BstC8I	GCNNGC	6 cut(s)	389, 421, 1163, 1170, 1978, 2400
BstDEI	CTNAG	8 cut(s)	102, 357, 447, 458, 525, 780, 830, 1125
BstDSI	CCRYGG	2 cut(s)	1971, 2055
BstENI	CCTNNNNNAGG	1 cut(s)	524
BstF5I	GGATG	5 cut(s)	573, 1512, 1838, 1967, 2462
BstH2I	RGCGCY	1 cut(s)	2431
BstHHI	GCGC	2 cut(s)	387, 2430
BstMAI	GTCTC	6 cut(s)	174, 360, 497, 1124, 2276, 2440
BstMCI	CGRYCG	1 cut(s)	1052
BstNI	CCWGG	6 cut(s)	564, 576, 1406, 1503, 2076, 2261
BstNSI	RCATGY	3 cut(s)	385, 2278, 2416
BstSCI	CCNGG	7 cut(s)	562, 574, 705, 1404, 1501, 2074, 2259
BstSFI	CTRYAG	7 cut(s)	531, 762, 1150, 1952, 2122, 2150, 2300
BstSLI	GKGCMC	2 cut(s)	143, 2357
BstSNI	TACGTA	1 cut(s)	1987
BstV2I	GAAGAC	3 cut(s)	261, 1281, 2484
BstX2I	RGATCY	4 cut(s)	594, 678, 1831, 2109
BstXI	CCANNNNNNTGG	2 cut(s)	563, 1877
BstYI	RGATCY	4 cut(s)	594, 678, 1831, 2109
BsuRI	GGCC	4 cut(s)	1289, 1513, 1533, 1602
BtgI	CCRYGG	2 cut(s)	1971, 2055
BtgZI	GCGATG	2 cut(s)	20, 2036
BtsCI	GGATG	5 cut(s)	573, 1512, 1838, 1967, 2462
BtsI	GCAGTG	2 cut(s)	49, 625
BtsIMutI	CAGTG	6 cut(s)	49, 625, 800, 913, 2013, 2096
Cac8I	GCNNGC	6 cut(s)	389, 421, 1163, 1170, 1978, 2400
CaiI	CAGNNNCTG	3 cut(s)	394, 413, 539
CfoI	GCGC	2 cut(s)	387, 2430
Cfr10I	RCCGGY	1 cut(s)	2239
Cfr13I	GGNCC	6 cut(s)	553, 578, 825, 902, 1531, 2060
Csp6I	GTAC	4 cut(s)	379, 1498, 1824, 1988
CviAII	CATG	9 cut(s)	382, 972, 1375, 1543, 1972, 2056, 2275, 2413, 2432
CviQI	GTAC	4 cut(s)	379, 1498, 1824, 1988
DdeI	CTNAG	8 cut(s)	102, 357, 447, 458, 525, 780, 830, 1125
DinI	GGCGCC	1 cut(s)	2429
DriI	GACNNNNNGTC	1 cut(s)	1842
EaeI	YGGCCR	1 cut(s)	1287
Eam1104I	CTCTTC	1 cut(s)	1566
Eam1105I	GACNNNNNGTC	1 cut(s)	1842
EarI	CTCTTC	1 cut(s)	1566
Eco105I	TACGTA	1 cut(s)	1987
Eco130I	CCWWGG	5 cut(s)	507, 1809, 1971, 2055, 2163
Eco24I	GRGCYC	1 cut(s)	1859
Eco31I	GGTCTC	1 cut(s)	497
Eco47I	GGWCC	5 cut(s)	553, 578, 825, 902, 2060
Eco57I	CTGAAG	2 cut(s)	263, 1293
EcoNI	CCTNNNNNAGG	1 cut(s)	524
EcoRI	GAATTC	1 cut(s)	1888
EcoRII	CCWGG	6 cut(s)	562, 574, 1404, 1501, 2074, 2259
EcoT14I	CCWWGG	5 cut(s)	507, 1809, 1971, 2055, 2163
EcoT38I	GRGCYC	1 cut(s)	1859
EgeI	GGCGCC	1 cut(s)	2429
EheI	GGCGCC	1 cut(s)	2429
ErhI	CCWWGG	5 cut(s)	507, 1809, 1971, 2055, 2163
FaeI	CATG	9 cut(s)	385, 975, 1378, 1546, 1975, 2059, 2278, 2416, 2435
FalI	AAGNNNNNCTT	2 cut(s)	1563, 1595
FaqI	GGGAC	5 cut(s)	722, 772, 888, 1652, 2073
FatI	CATG	9 cut(s)	381, 971, 1374, 1542, 1971, 2055, 2274, 2412, 2431
FauI	CCCGC	1 cut(s)	1177
FauNDI	CATATG	3 cut(s)	787, 1492, 2440
FbaI	TGATCA	1 cut(s)	1254
FblI	GTMKAC	3 cut(s)	1149, 1951, 2417
FokI	GGATG	5 cut(s)	580, 1519, 1825, 1954, 2469
FriOI	GRGCYC	1 cut(s)	1859
FspBI	CTAG	4 cut(s)	633, 843, 951, 2279
GlaI	GCGC	2 cut(s)	386, 2429
GsaI	CCCAGC	3 cut(s)	81, 2268, 2406
GsuI	CTGGAG	4 cut(s)	1380, 1899, 2067, 2493
HaeII	RGCGCY	1 cut(s)	2431
HaeIII	GGCC	4 cut(s)	1289, 1513, 1533, 1602
HapII	CCGG	3 cut(s)	581, 706, 2240
HhaI	GCGC	2 cut(s)	387, 2430
Hin1I	GRCGYC	1 cut(s)	2428
Hin1II	CATG	9 cut(s)	385, 975, 1378, 1546, 1975, 2059, 2278, 2416, 2435
Hin6I	GCGC	2 cut(s)	385, 2428
HinP1I	GCGC	2 cut(s)	385, 2428
HincII	GTYRAC	2 cut(s)	289, 1006
HindII	GTYRAC	2 cut(s)	289, 1006
HpaI	GTTAAC	1 cut(s)	289
HpaII	CCGG	3 cut(s)	581, 706, 2240
HphI	GGTGA	2 cut(s)	1151, 2183
Hpy166II	GTNNAC	8 cut(s)	289, 1006, 1150, 1524, 1952, 2355, 2418, 2515
Hpy8I	GTNNAC	8 cut(s)	289, 1006, 1150, 1524, 1952, 2355, 2418, 2515
HpyAV	CCTTC	3 cut(s)	156, 1592, 1936
HpyCH4III	ACNGT	4 cut(s)	286, 713, 1154, 1262
HpyCH4IV	ACGT	2 cut(s)	1986, 2341
HpyF3I	CTNAG	8 cut(s)	102, 357, 447, 458, 525, 780, 830, 1125
HpySE526I	ACGT	2 cut(s)	1986, 2341
Hsp92I	GRCGYC	1 cut(s)	2428
Hsp92II	CATG	9 cut(s)	385, 975, 1378, 1546, 1975, 2059, 2278, 2416, 2435
HspAI	GCGC	2 cut(s)	385, 2428
KasI	GGCGCC	1 cut(s)	2427
Kpn2I	TCCGGA	1 cut(s)	580
Ksp22I	TGATCA	1 cut(s)	1254
KspAI	GTTAAC	1 cut(s)	289
LmnI	GCTCC	8 cut(s)	717, 796, 811, 911, 1423, 1688, 1717, 1747
MaeI	CTAG	4 cut(s)	633, 843, 951, 2279
MaeII	ACGT	2 cut(s)	1986, 2341
MaeIII	GTNAC	5 cut(s)	92, 436, 1106, 1553, 2171
MboII	GAAGA	6 cut(s)	261, 679, 1286, 1583, 1631, 2489
MfeI	CAATTG	1 cut(s)	1716
MflI	RGATCY	4 cut(s)	594, 678, 1831, 2109
MhlI	GDGCHC	3 cut(s)	143, 1859, 2357
MluCI	AATT	8 cut(s)	296, 990, 1294, 1306, 1330, 1716, 1888, 2482
Mly113I	GGCGCC	1 cut(s)	2428
MlyI	GAGTC	7 cut(s)	135, 275, 422, 477, 2056, 2168, 2342
MmeI	TCCRAC	3 cut(s)	695, 818, 1666
MroI	TCCGGA	1 cut(s)	580
MroXI	GAANNNNTTC	2 cut(s)	945, 1587
MseI	TTAA	7 cut(s)	69, 288, 684, 1199, 1212, 1233, 2183
MslI	CAYNNNNRTG	3 cut(s)	69, 1283, 2205
MspA1I	CMGCKG	4 cut(s)	394, 1172, 1400, 2402
MspI	CCGG	3 cut(s)	581, 706, 2240
MspR9I	CCNGG	7 cut(s)	564, 576, 707, 1406, 1503, 2076, 2261
MunI	CAATTG	1 cut(s)	1716
Mva1269I	GAATGC	2 cut(s)	451, 1684
MvaI	CCWGG	6 cut(s)	564, 576, 1406, 1503, 2076, 2261
NarI	GGCGCC	1 cut(s)	2428
NciI	CCSGG	1 cut(s)	707
NcoI	CCATGG	2 cut(s)	1971, 2055
NdeI	CATATG	3 cut(s)	787, 1492, 2440
NlaIII	CATG	9 cut(s)	385, 975, 1378, 1546, 1975, 2059, 2278, 2416, 2435
NmeAIII	GCCGAG	2 cut(s)	160, 174
NmuCI	GTSAC	2 cut(s)	1553, 2171
NspI	RCATGY	3 cut(s)	385, 2278, 2416
NspV	TTCGAA	1 cut(s)	197
PasI	CCCWGGG	1 cut(s)	1502
PctI	GAATGC	2 cut(s)	451, 1684
PdmI	GAANNNNTTC	2 cut(s)	945, 1587
PfeI	GAWTC	7 cut(s)	584, 964, 1061, 1321, 1781, 1796, 2159
Pfl23II	CGTACG	1 cut(s)	1987
PflMI	CCANNNNNTGG	1 cut(s)	2457
PfoI	TCCNGGA	1 cut(s)	705
PleI	GAGTC	7 cut(s)	134, 274, 422, 477, 2055, 2168, 2341
PluTI	GGCGCC	1 cut(s)	2431
PpsI	GAGTC	7 cut(s)	134, 274, 422, 477, 2055, 2168, 2341
Ppu21I	YACGTR	1 cut(s)	1987
PshBI	ATTAAT	1 cut(s)	1199
PsiI	TTATAA	1 cut(s)	1283
Psp6I	CCWGG	6 cut(s)	562, 574, 1404, 1501, 2074, 2259
PspFI	CCCAGC	3 cut(s)	77, 2264, 2402
PspGI	CCWGG	6 cut(s)	562, 574, 1404, 1501, 2074, 2259
PspLI	CGTACG	1 cut(s)	1987
PspPI	GGNCC	6 cut(s)	553, 578, 825, 902, 1531, 2060
PstI	CTGCAG	2 cut(s)	2154, 2304
PstNI	CAGNNNCTG	3 cut(s)	394, 413, 539
PsuI	RGATCY	4 cut(s)	594, 678, 1831, 2109
PvuII	CAGCTG	3 cut(s)	394, 1400, 2402
RsaI	GTAC	4 cut(s)	380, 1499, 1825, 1989
RsaNI	GTAC	4 cut(s)	379, 1498, 1824, 1988
RseI	CAYNNNNRTG	3 cut(s)	69, 1283, 2205
SaqAI	TTAA	7 cut(s)	69, 288, 684, 1199, 1212, 1233, 2183
Sau96I	GGNCC	6 cut(s)	553, 578, 825, 902, 1531, 2060
SchI	GAGTC	7 cut(s)	135, 275, 422, 477, 2056, 2168, 2342
ScrFI	CCNGG	7 cut(s)	564, 576, 707, 1406, 1503, 2076, 2261
SduI	GDGCHC	3 cut(s)	143, 1859, 2357
SfcI	CTRYAG	7 cut(s)	531, 762, 1150, 1952, 2122, 2150, 2300
SfoI	GGCGCC	1 cut(s)	2429
SfuI	TTCGAA	1 cut(s)	197
SinI	GGWCC	5 cut(s)	553, 578, 825, 902, 2060
SmiMI	CAYNNNNRTG	3 cut(s)	69, 1283, 2205
SmlI	CTYRAG	2 cut(s)	1019, 1417
SmoI	CTYRAG	2 cut(s)	1019, 1417
SnaBI	TACGTA	1 cut(s)	1987
SpeI	ACTAGT	1 cut(s)	842
Sse9I	AATT	8 cut(s)	296, 990, 1294, 1306, 1330, 1716, 1888, 2482
SsiI	CCGC	6 cut(s)	238, 497, 1052, 1097, 1170, 1765
SspDI	GGCGCC	1 cut(s)	2427
SspMI	CTAG	4 cut(s)	633, 843, 951, 2279
StyD4I	CCNGG	7 cut(s)	562, 574, 705, 1404, 1501, 2074, 2259
StyI	CCWWGG	5 cut(s)	507, 1809, 1971, 2055, 2163
TaaI	ACNGT	4 cut(s)	286, 713, 1154, 1262
TaiI	ACGT	2 cut(s)	1989, 2344
TasI	AATT	8 cut(s)	296, 990, 1294, 1306, 1330, 1716, 1888, 2482
TauI	GCSGC	1 cut(s)	1100
TfiI	GAWTC	7 cut(s)	584, 964, 1061, 1321, 1781, 1796, 2159
Tru1I	TTAA	7 cut(s)	69, 288, 684, 1199, 1212, 1233, 2183
Tru9I	TTAA	7 cut(s)	69, 288, 684, 1199, 1212, 1233, 2183
TscAI	CASTG	6 cut(s)	49, 625, 807, 913, 2013, 2103
TseFI	GTSAC	2 cut(s)	1553, 2171
Tsp45I	GTSAC	2 cut(s)	1553, 2171
TspGWI	ACGGA	4 cut(s)	768, 1734, 1926, 2040
TspRI	CASTG	6 cut(s)	49, 625, 807, 913, 2013, 2103
Van91I	CCANNNNNTGG	1 cut(s)	2457
VneI	GTGCAC	1 cut(s)	2353
VpaK11BI	GGWCC	5 cut(s)	553, 578, 825, 902, 2060
VspI	ATTAAT	1 cut(s)	1199
XagI	CCTNNNNNAGG	1 cut(s)	524
XapI	RAATTY	3 cut(s)	1294, 1306, 1888
XceI	RCATGY	3 cut(s)	385, 2278, 2416
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1849
XmiI	GTMKAC	3 cut(s)	1149, 1951, 2417
XmnI	GAANNNNTTC	2 cut(s)	945, 1587
XspI	CTAG	4 cut(s)	633, 843, 951, 2279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.