mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63480 AT5G63480 |
| fragaria_vesca | FvH4_1g29942 FvH4_2g37750 |
| malus_domestica | MD08G1006700.v1.1 MD15G1005900.v1.1 |
| prunus_persica | Prupe.1G358600_v2.0.a1 |
| pyrus_communis | pycom08g00520 pycom15g00450 |
| rosa_chinensis | RchiOBHm_Chr6g0303761 |
| rosa_laevigata | RLG00000011047 RLG00000027493 |
| rosa_multiflora | Rmu_sc0014011.1_g000001 |
| rosa_rugosa | Rorug02G0181300 Rorug04G0014400 Rorug05G0039400 Rorug06G0324600 |
| rosa_samantha | Rh6AG438900 Rh6BG464100 Rh6CG451200 Rh6DG438100 |
| rosa_wichuraiana | Rw6G038000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 149 |
| AccII | CGCG | 1 cut(s) | 176 |
| AciI | CCGC | 7 cut(s) | 92, 171, 174, 213, 221, 270, 276 |
| AclWI | GGATC | 1 cut(s) | 418 |
| AcsI | RAATTY | 1 cut(s) | 367 |
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AflII | CTTAAG | 1 cut(s) | 457 |
| AgsI | TTSAA | 1 cut(s) | 89 |
| AluBI | AGCT | 3 cut(s) | 49, 127, 158 |
| AluI | AGCT | 3 cut(s) | 49, 127, 158 |
| Alw26I | GTCTC | 2 cut(s) | 22, 467 |
| AlwI | GGATC | 1 cut(s) | 418 |
| Ama87I | CYCGRG | 1 cut(s) | 163 |
| ApeKI | GCWGC | 3 cut(s) | 4, 224, 356 |
| ApoI | RAATTY | 1 cut(s) | 367 |
| AsuNHI | GCTAGC | 1 cut(s) | 49 |
| AvaI | CYCGRG | 1 cut(s) | 163 |
| BbsI | GAAGAC | 2 cut(s) | 305, 432 |
| BbvI | GCAGC | 2 cut(s) | 211, 343 |
| BccI | CCATC | 2 cut(s) | 49, 227 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 206, 240 |
| BcoDI | GTCTC | 2 cut(s) | 22, 467 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BfmI | CTRYAG | 1 cut(s) | 5 |
| BfrI | CTTAAG | 1 cut(s) | 457 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 221 |
| BisI | GCNGC | 6 cut(s) | 5, 93, 174, 222, 225, 357 |
| BlsI | GCNGC | 6 cut(s) | 6, 94, 175, 223, 226, 358 |
| BmeT110I | CYCGRG | 1 cut(s) | 163 |
| BmsI | GCATC | 3 cut(s) | 208, 253, 395 |
| BmtI | GCTAGC | 1 cut(s) | 53 |
| BpiI | GAAGAC | 2 cut(s) | 305, 432 |
| BsaI | GGTCTC | 1 cut(s) | 22 |
| BseGI | GGATG | 1 cut(s) | 307 |
| BseMII | CTCAG | 2 cut(s) | 342, 478 |
| BseRI | GAGGAG | 1 cut(s) | 461 |
| BseXI | GCAGC | 2 cut(s) | 211, 343 |
| Bsh1236I | CGCG | 1 cut(s) | 176 |
| BsiHKCI | CYCGRG | 1 cut(s) | 163 |
| BsmAI | GTCTC | 2 cut(s) | 22, 467 |
| Bso31I | GGTCTC | 1 cut(s) | 22 |
| BsoBI | CYCGRG | 1 cut(s) | 163 |
| Bsp143I | GATC | 2 cut(s) | 410, 432 |
| BspACI | CCGC | 7 cut(s) | 92, 171, 174, 213, 221, 270, 276 |
| BspCNI | CTCAG | 2 cut(s) | 341, 477 |
| BspFNI | CGCG | 1 cut(s) | 176 |
| BspMAI | CTGCAG | 1 cut(s) | 9 |
| BspOI | GCTAGC | 1 cut(s) | 53 |
| BspPI | GGATC | 1 cut(s) | 418 |
| BspTI | CTTAAG | 1 cut(s) | 457 |
| BspTNI | GGTCTC | 1 cut(s) | 22 |
| BssMI | GATC | 2 cut(s) | 410, 432 |
| BstAFI | CTTAAG | 1 cut(s) | 457 |
| BstC8I | GCNNGC | 2 cut(s) | 51, 453 |
| BstDEI | CTNAG | 2 cut(s) | 328, 464 |
| BstF5I | GGATG | 1 cut(s) | 307 |
| BstFNI | CGCG | 1 cut(s) | 176 |
| BstKTI | GATC | 2 cut(s) | 413, 435 |
| BstMAI | GTCTC | 2 cut(s) | 22, 467 |
| BstMBI | GATC | 2 cut(s) | 410, 432 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 221, 353 |
| BstSFI | CTRYAG | 1 cut(s) | 5 |
| BstUI | CGCG | 1 cut(s) | 176 |
| BstV1I | GCAGC | 2 cut(s) | 211, 343 |
| BstV2I | GAAGAC | 2 cut(s) | 305, 432 |
| BstX2I | RGATCY | 1 cut(s) | 410 |
| BstYI | RGATCY | 1 cut(s) | 410 |
| BtgZI | GCGATG | 2 cut(s) | 68, 225 |
| BtsCI | GGATG | 1 cut(s) | 307 |
| BtsIMutI | CAGTG | 1 cut(s) | 336 |
| Cac8I | GCNNGC | 2 cut(s) | 51, 453 |
| CviAII | CATG | 3 cut(s) | 115, 494, 546 |
| CviJI | RGCY | 8 cut(s) | 49, 113, 127, 158, 203, 224, 455, 555 |
| CviKI_1 | RGCY | 8 cut(s) | 49, 113, 127, 158, 203, 224, 455, 555 |
| DdeI | CTNAG | 2 cut(s) | 328, 464 |
| DpnI | GATC | 2 cut(s) | 412, 434 |
| DpnII | GATC | 2 cut(s) | 410, 432 |
| EciI | GGCGGA | 3 cut(s) | 160, 202, 291 |
| Eco31I | GGTCTC | 1 cut(s) | 22 |
| Eco32I | GATATC | 1 cut(s) | 538 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| Eco88I | CYCGRG | 1 cut(s) | 163 |
| EcoRV | GATATC | 1 cut(s) | 538 |
| FaeI | CATG | 3 cut(s) | 118, 497, 549 |
| FaiI | YATR | 6 cut(s) | 116, 321, 495, 509, 530, 547 |
| FatI | CATG | 3 cut(s) | 114, 493, 545 |
| FauI | CCCGC | 1 cut(s) | 263 |
| FblI | GTMKAC | 1 cut(s) | 149 |
| Fnu4HI | GCNGC | 6 cut(s) | 5, 93, 174, 222, 225, 357 |
| FokI | GGATG | 1 cut(s) | 314 |
| Fsp4HI | GCNGC | 6 cut(s) | 5, 93, 174, 222, 225, 357 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GluI | GCNGC | 6 cut(s) | 5, 93, 174, 222, 225, 357 |
| Hin1II | CATG | 3 cut(s) | 118, 497, 549 |
| HinfI | GANTC | 3 cut(s) | 254, 310, 361 |
| Hpy166II | GTNNAC | 1 cut(s) | 150 |
| Hpy188I | TCNGA | 4 cut(s) | 102, 253, 391, 467 |
| Hpy188III | TCNNGA | 3 cut(s) | 19, 416, 521 |
| Hpy8I | GTNNAC | 1 cut(s) | 150 |
| Hpy99I | CGWCG | 7 cut(s) | 25, 28, 31, 34, 181, 184, 187 |
| HpyAV | CCTTC | 2 cut(s) | 53, 370 |
| HpyCH4V | TGCA | 3 cut(s) | 7, 397, 479 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 221, 353 |
| HpyF3I | CTNAG | 2 cut(s) | 328, 464 |
| Hsp92II | CATG | 3 cut(s) | 118, 497, 549 |
| Kzo9I | GATC | 2 cut(s) | 410, 432 |
| LmnI | GCTCC | 2 cut(s) | 46, 448 |
| LpnPI | CCDG | 3 cut(s) | 29, 246, 429 |
| Lsp1109I | GCAGC | 2 cut(s) | 211, 343 |
| LweI | GCATC | 3 cut(s) | 208, 253, 395 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MaeIII | GTNAC | 1 cut(s) | 331 |
| MalI | GATC | 2 cut(s) | 412, 434 |
| MboI | GATC | 2 cut(s) | 410, 432 |
| MboII | GAAGA | 4 cut(s) | 89, 305, 437, 496 |
| MfeI | CAATTG | 1 cut(s) | 71 |
| MflI | RGATCY | 1 cut(s) | 410 |
| MluCI | AATT | 4 cut(s) | 71, 105, 367, 440 |
| MlyI | GAGTC | 1 cut(s) | 319 |
| MnlI | CCTC | 3 cut(s) | 272, 298, 439 |
| MseI | TTAA | 2 cut(s) | 458, 498 |
| MspCI | CTTAAG | 1 cut(s) | 457 |
| MunI | CAATTG | 1 cut(s) | 71 |
| MvnI | CGCG | 1 cut(s) | 176 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 221, 353 |
| NdeII | GATC | 2 cut(s) | 410, 432 |
| NheI | GCTAGC | 1 cut(s) | 49 |
| NlaIII | CATG | 3 cut(s) | 118, 497, 549 |
| NmuCI | GTSAC | 1 cut(s) | 331 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 26, 29, 35, 213 |
| PfeI | GAWTC | 2 cut(s) | 254, 361 |
| PkrI | GCNGC | 6 cut(s) | 6, 94, 175, 223, 226, 358 |
| PleI | GAGTC | 1 cut(s) | 318 |
| PpsI | GAGTC | 1 cut(s) | 318 |
| PstI | CTGCAG | 1 cut(s) | 9 |
| PsuI | RGATCY | 1 cut(s) | 410 |
| SaqAI | TTAA | 2 cut(s) | 458, 498 |
| SatI | GCNGC | 6 cut(s) | 5, 93, 174, 222, 225, 357 |
| Sau3AI | GATC | 2 cut(s) | 410, 432 |
| SchI | GAGTC | 1 cut(s) | 319 |
| SetI | ASST | 4 cut(s) | 18, 51, 129, 160 |
| SfaNI | GCATC | 3 cut(s) | 208, 253, 395 |
| SfcI | CTRYAG | 1 cut(s) | 5 |
| SmlI | CTYRAG | 1 cut(s) | 457 |
| SmoI | CTYRAG | 1 cut(s) | 457 |
| Sse9I | AATT | 4 cut(s) | 71, 105, 367, 440 |
| SsiI | CCGC | 7 cut(s) | 92, 171, 174, 213, 221, 270, 276 |
| SspMI | CTAG | 1 cut(s) | 50 |
| TaqI | TCGA | 2 cut(s) | 20, 435 |
| TasI | AATT | 4 cut(s) | 71, 105, 367, 440 |
| TauI | GCSGC | 3 cut(s) | 95, 176, 224 |
| TfiI | GAWTC | 2 cut(s) | 254, 361 |
| Tru1I | TTAA | 2 cut(s) | 458, 498 |
| Tru9I | TTAA | 2 cut(s) | 458, 498 |
| TscAI | CASTG | 1 cut(s) | 336 |
| TseFI | GTSAC | 1 cut(s) | 331 |
| TseI | GCWGC | 3 cut(s) | 4, 224, 356 |
| Tsp45I | GTSAC | 1 cut(s) | 331 |
| TspDTI | ATGAA | 2 cut(s) | 131, 482 |
| TspGWI | ACGGA | 1 cut(s) | 126 |
| TspRI | CASTG | 1 cut(s) | 336 |
| Vha464I | CTTAAG | 1 cut(s) | 457 |
| XapI | RAATTY | 1 cut(s) | 367 |
| XmiI | GTMKAC | 1 cut(s) | 149 |
| XspI | CTAG | 1 cut(s) | 50 |