mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63480 AT5G63480 |
| fragaria_vesca | FvH4_1g29942 FvH4_2g37750 |
| malus_domestica | MD08G1006700.v1.1 MD15G1005900.v1.1 |
| prunus_persica | Prupe.1G358600_v2.0.a1 |
| pyrus_communis | pycom08g00520 pycom15g00450 |
| rosa_chinensis | RchiOBHm_Chr6g0303761 |
| rosa_laevigata | RLG00000011047 RLG00000027493 |
| rosa_multiflora | Rmu_sc0014011.1_g000001 |
| rosa_rugosa | Rorug02G0181300 Rorug04G0014400 Rorug05G0039400 Rorug06G0324600 |
| rosa_samantha | Rh6AG438900 Rh6BG464100 Rh6CG451200 Rh6DG438100 |
| rosa_wichuraiana | Rw6G038000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 111 |
| AclWI | GGATC | 1 cut(s) | 121 |
| AcoI | YGGCCR | 1 cut(s) | 61 |
| AcsI | RAATTY | 1 cut(s) | 286 |
| AcuI | CTGAAG | 1 cut(s) | 225 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 107 |
| AhlI | ACTAGT | 1 cut(s) | 89 |
| AjnI | CCWGG | 1 cut(s) | 100 |
| AluBI | AGCT | 2 cut(s) | 13, 298 |
| AluI | AGCT | 2 cut(s) | 13, 298 |
| AlwI | GGATC | 1 cut(s) | 121 |
| AoxI | GGCC | 1 cut(s) | 61 |
| ApoI | RAATTY | 1 cut(s) | 286 |
| AspS9I | GGNCC | 1 cut(s) | 95 |
| AsuC2I | CCSGG | 1 cut(s) | 164 |
| AvaII | GGWCC | 1 cut(s) | 95 |
| BauI | CACGAG | 1 cut(s) | 194 |
| BbsI | GAAGAC | 1 cut(s) | 66 |
| BceAI | ACGGC | 1 cut(s) | 171 |
| BciT130I | CCWGG | 1 cut(s) | 102 |
| BclI | TGATCA | 1 cut(s) | 337 |
| BcnI | CCSGG | 1 cut(s) | 164 |
| BcuI | ACTAGT | 1 cut(s) | 89 |
| BfaI | CTAG | 2 cut(s) | 90, 346 |
| BfmI | CTRYAG | 1 cut(s) | 302 |
| Bme1390I | CCNGG | 2 cut(s) | 102, 164 |
| Bme18I | GGWCC | 1 cut(s) | 95 |
| BmgT120I | GGNCC | 1 cut(s) | 95 |
| BmrFI | CCNGG | 2 cut(s) | 102, 164 |
| BmsI | GCATC | 1 cut(s) | 239 |
| BpiI | GAAGAC | 1 cut(s) | 66 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 188, 220 |
| BpuEI | CTTGAG | 2 cut(s) | 140, 301 |
| BpuMI | CCSGG | 1 cut(s) | 164 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 116, 146 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 107 |
| Bse1I | ACTGG | 1 cut(s) | 291 |
| BseBI | CCWGG | 1 cut(s) | 102 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 107 |
| BseMII | CTCAG | 1 cut(s) | 219 |
| BseNI | ACTGG | 1 cut(s) | 291 |
| BseRI | GAGGAG | 1 cut(s) | 137 |
| BsgI | GTGCAG | 1 cut(s) | 54 |
| BshFI | GGCC | 1 cut(s) | 63 |
| BsiSI | CCGG | 1 cut(s) | 163 |
| BslFI | GGGAC | 1 cut(s) | 18 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 107 |
| BsmFI | GGGAC | 1 cut(s) | 18 |
| BsnI | GGCC | 1 cut(s) | 63 |
| Bsp143I | GATC | 2 cut(s) | 113, 337 |
| BspACI | CCGC | 1 cut(s) | 111 |
| BspANI | GGCC | 1 cut(s) | 63 |
| BspCNI | CTCAG | 1 cut(s) | 218 |
| BspPI | GGATC | 1 cut(s) | 121 |
| BsrI | ACTGG | 1 cut(s) | 291 |
| BssMI | GATC | 2 cut(s) | 113, 337 |
| BssSI | CACGAG | 1 cut(s) | 194 |
| Bst2BI | CACGAG | 1 cut(s) | 194 |
| Bst2UI | CCWGG | 1 cut(s) | 102 |
| Bst4CI | ACNGT | 1 cut(s) | 306 |
| BstDEI | CTNAG | 1 cut(s) | 205 |
| BstKTI | GATC | 2 cut(s) | 116, 340 |
| BstMBI | GATC | 2 cut(s) | 113, 337 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 164, 173 |
| BstNI | CCWGG | 1 cut(s) | 102 |
| BstSCI | CCNGG | 2 cut(s) | 100, 162 |
| BstSFI | CTRYAG | 1 cut(s) | 302 |
| BstV2I | GAAGAC | 1 cut(s) | 66 |
| BstX2I | RGATCY | 1 cut(s) | 113 |
| BstYI | RGATCY | 1 cut(s) | 113 |
| BsuRI | GGCC | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 1 cut(s) | 95 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 73, 108 |
| CviJI | RGCY | 7 cut(s) | 13, 41, 63, 128, 158, 167, 298 |
| CviKI_1 | RGCY | 7 cut(s) | 13, 41, 63, 128, 158, 167, 298 |
| DdeI | CTNAG | 1 cut(s) | 205 |
| DpnI | GATC | 2 cut(s) | 115, 339 |
| DpnII | GATC | 2 cut(s) | 113, 337 |
| EaeI | YGGCCR | 1 cut(s) | 61 |
| EciI | GGCGGA | 1 cut(s) | 126 |
| Eco47I | GGWCC | 1 cut(s) | 95 |
| Eco57I | CTGAAG | 1 cut(s) | 225 |
| EcoRII | CCWGG | 1 cut(s) | 100 |
| EcoT22I | ATGCAT | 1 cut(s) | 254 |
| FaiI | YATR | 5 cut(s) | 53, 55, 57, 141, 336 |
| FaqI | GGGAC | 1 cut(s) | 18 |
| FbaI | TGATCA | 1 cut(s) | 337 |
| FspBI | CTAG | 2 cut(s) | 90, 346 |
| HaeIII | GGCC | 1 cut(s) | 63 |
| HapII | CCGG | 1 cut(s) | 163 |
| HincII | GTYRAC | 1 cut(s) | 202 |
| HindII | GTYRAC | 1 cut(s) | 202 |
| HinfI | GANTC | 2 cut(s) | 68, 181 |
| HpaII | CCGG | 1 cut(s) | 163 |
| Hpy166II | GTNNAC | 1 cut(s) | 202 |
| Hpy188I | TCNGA | 3 cut(s) | 208, 248, 310 |
| Hpy188III | TCNNGA | 3 cut(s) | 119, 194, 280 |
| Hpy8I | GTNNAC | 1 cut(s) | 202 |
| HpyAV | CCTTC | 1 cut(s) | 249 |
| HpyCH4III | ACNGT | 1 cut(s) | 306 |
| HpyCH4V | TGCA | 3 cut(s) | 35, 252, 258 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 164, 173 |
| HpyF3I | CTNAG | 1 cut(s) | 205 |
| Ksp22I | TGATCA | 1 cut(s) | 337 |
| Kzo9I | GATC | 2 cut(s) | 113, 337 |
| LpnPI | CCDG | 5 cut(s) | 21, 87, 114, 176, 304 |
| LweI | GCATC | 1 cut(s) | 239 |
| MaeI | CTAG | 2 cut(s) | 90, 346 |
| MaeIII | GTNAC | 1 cut(s) | 151 |
| MalI | GATC | 2 cut(s) | 115, 339 |
| MboI | GATC | 2 cut(s) | 113, 337 |
| MboII | GAAGA | 1 cut(s) | 66 |
| MflI | RGATCY | 1 cut(s) | 113 |
| MluCI | AATT | 4 cut(s) | 187, 232, 259, 286 |
| MmeI | TCCRAC | 1 cut(s) | 299 |
| MnlI | CCTC | 4 cut(s) | 108, 115, 118, 190 |
| Mph1103I | ATGCAT | 1 cut(s) | 254 |
| MspI | CCGG | 1 cut(s) | 163 |
| MspR9I | CCNGG | 2 cut(s) | 102, 164 |
| MvaI | CCWGG | 1 cut(s) | 102 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 164, 173 |
| NciI | CCSGG | 1 cut(s) | 164 |
| NdeII | GATC | 2 cut(s) | 113, 337 |
| NmeAIII | GCCGAG | 1 cut(s) | 202 |
| NmuCI | GTSAC | 1 cut(s) | 151 |
| NsiI | ATGCAT | 1 cut(s) | 254 |
| PfeI | GAWTC | 2 cut(s) | 68, 181 |
| Psp6I | CCWGG | 1 cut(s) | 100 |
| PspGI | CCWGG | 1 cut(s) | 100 |
| PspPI | GGNCC | 1 cut(s) | 95 |
| PsuI | RGATCY | 1 cut(s) | 113 |
| Sau3AI | GATC | 2 cut(s) | 113, 337 |
| Sau96I | GGNCC | 1 cut(s) | 95 |
| ScrFI | CCNGG | 2 cut(s) | 102, 164 |
| SetI | ASST | 3 cut(s) | 15, 201, 300 |
| SfaNI | GCATC | 1 cut(s) | 239 |
| SfcI | CTRYAG | 1 cut(s) | 302 |
| SinI | GGWCC | 1 cut(s) | 95 |
| SmlI | CTYRAG | 2 cut(s) | 119, 280 |
| SmoI | CTYRAG | 2 cut(s) | 119, 280 |
| SpeI | ACTAGT | 1 cut(s) | 89 |
| Sse9I | AATT | 4 cut(s) | 187, 232, 259, 286 |
| SsiI | CCGC | 1 cut(s) | 111 |
| SspMI | CTAG | 2 cut(s) | 90, 346 |
| StyD4I | CCNGG | 2 cut(s) | 100, 162 |
| TaaI | ACNGT | 1 cut(s) | 306 |
| TasI | AATT | 4 cut(s) | 187, 232, 259, 286 |
| TfiI | GAWTC | 2 cut(s) | 68, 181 |
| TseFI | GTSAC | 1 cut(s) | 151 |
| Tsp45I | GTSAC | 1 cut(s) | 151 |
| TspDTI | ATGAA | 1 cut(s) | 212 |
| VpaK11BI | GGWCC | 1 cut(s) | 95 |
| XapI | RAATTY | 1 cut(s) | 286 |
| XspI | CTAG | 2 cut(s) | 90, 346 |
| Zsp2I | ATGCAT | 1 cut(s) | 254 |