mediator of RNA polymerase II transcription subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63480 AT5G63480 |
| fragaria_vesca | FvH4_1g29942 FvH4_2g37750 |
| malus_domestica | MD08G1006700.v1.1 MD15G1005900.v1.1 |
| prunus_persica | Prupe.1G358600_v2.0.a1 |
| pyrus_communis | pycom08g00520 pycom15g00450 |
| rosa_chinensis | RchiOBHm_Chr6g0303761 |
| rosa_laevigata | RLG00000011047 RLG00000027493 |
| rosa_multiflora | Rmu_sc0014011.1_g000001 |
| rosa_rugosa | Rorug02G0181300 Rorug04G0014400 Rorug05G0039400 Rorug06G0324600 |
| rosa_samantha | Rh6AG438900 Rh6BG464100 Rh6CG451200 Rh6DG438100 |
| rosa_wichuraiana | Rw6G038000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 26 |
| AjnI | CCWGG | 1 cut(s) | 152 |
| AluBI | AGCT | 2 cut(s) | 82, 124 |
| AluI | AGCT | 2 cut(s) | 82, 124 |
| Alw26I | GTCTC | 1 cut(s) | 67 |
| BciT130I | CCWGG | 1 cut(s) | 154 |
| BcoDI | GTCTC | 1 cut(s) | 67 |
| BglII | AGATCT | 1 cut(s) | 130 |
| Bme1390I | CCNGG | 1 cut(s) | 154 |
| BmiI | GGNNCC | 1 cut(s) | 19 |
| BmrFI | CCNGG | 1 cut(s) | 154 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 47, 79 |
| Bse1I | ACTGG | 1 cut(s) | 19 |
| BseBI | CCWGG | 1 cut(s) | 154 |
| BseGI | GGATG | 1 cut(s) | 34 |
| BseNI | ACTGG | 1 cut(s) | 19 |
| BseRI | GAGGAG | 1 cut(s) | 68 |
| BsmAI | GTCTC | 1 cut(s) | 67 |
| Bsp143I | GATC | 2 cut(s) | 118, 130 |
| BspACI | CCGC | 1 cut(s) | 26 |
| BspLI | GGNNCC | 1 cut(s) | 19 |
| BsrI | ACTGG | 1 cut(s) | 19 |
| BssMI | GATC | 2 cut(s) | 118, 130 |
| Bst2UI | CCWGG | 1 cut(s) | 154 |
| BstF5I | GGATG | 1 cut(s) | 34 |
| BstKTI | GATC | 2 cut(s) | 121, 133 |
| BstMAI | GTCTC | 1 cut(s) | 67 |
| BstMBI | GATC | 2 cut(s) | 118, 130 |
| BstNI | CCWGG | 1 cut(s) | 154 |
| BstSCI | CCNGG | 1 cut(s) | 152 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| BtsCI | GGATG | 1 cut(s) | 34 |
| CviJI | RGCY | 3 cut(s) | 62, 82, 124 |
| CviKI_1 | RGCY | 3 cut(s) | 62, 82, 124 |
| DpnI | GATC | 2 cut(s) | 120, 132 |
| DpnII | GATC | 2 cut(s) | 118, 130 |
| EcoRII | CCWGG | 1 cut(s) | 152 |
| EcoT22I | ATGCAT | 1 cut(s) | 100 |
| FaiI | YATR | 4 cut(s) | 100, 102, 116, 146 |
| FokI | GGATG | 1 cut(s) | 41 |
| Hpy188I | TCNGA | 2 cut(s) | 10, 176 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| Kzo9I | GATC | 2 cut(s) | 118, 130 |
| LmnI | GCTCC | 1 cut(s) | 79 |
| LpnPI | CCDG | 4 cut(s) | 36, 62, 139, 166 |
| MaeIII | GTNAC | 1 cut(s) | 136 |
| MalI | GATC | 2 cut(s) | 120, 132 |
| MboI | GATC | 2 cut(s) | 118, 130 |
| MboII | GAAGA | 1 cut(s) | 100 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MluCI | AATT | 2 cut(s) | 39, 67 |
| MnlI | CCTC | 2 cut(s) | 46, 73 |
| Mph1103I | ATGCAT | 1 cut(s) | 100 |
| MspR9I | CCNGG | 1 cut(s) | 154 |
| MvaI | CCWGG | 1 cut(s) | 154 |
| NdeII | GATC | 2 cut(s) | 118, 130 |
| NlaIV | GGNNCC | 1 cut(s) | 19 |
| NmuCI | GTSAC | 1 cut(s) | 136 |
| NsiI | ATGCAT | 1 cut(s) | 100 |
| Psp6I | CCWGG | 1 cut(s) | 152 |
| PspGI | CCWGG | 1 cut(s) | 152 |
| PspN4I | GGNNCC | 1 cut(s) | 19 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| Sau3AI | GATC | 2 cut(s) | 118, 130 |
| ScrFI | CCNGG | 1 cut(s) | 154 |
| SetI | ASST | 4 cut(s) | 84, 111, 126, 155 |
| SgeI | CNNG | 9 cut(s) | 27, 35, 89, 95, 118, 140, 146, 165, 166 |
| Sse9I | AATT | 2 cut(s) | 39, 67 |
| SsiI | CCGC | 1 cut(s) | 26 |
| StyD4I | CCNGG | 1 cut(s) | 152 |
| TasI | AATT | 2 cut(s) | 39, 67 |
| TseFI | GTSAC | 1 cut(s) | 136 |
| Tsp45I | GTSAC | 1 cut(s) | 136 |
| TspDTI | ATGAA | 1 cut(s) | 45 |
| TspGWI | ACGGA | 1 cut(s) | 160 |
| Zsp2I | ATGCAT | 1 cut(s) | 100 |