splicing factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G64270 |
| fragaria_vesca | FvH4_2g14010 FvH4_3g24440 |
| malus_domestica | MD17G1162000.v1.1 MD17G1162100.v1.1 |
| prunus_persica | Prupe.8G065000_v2.0.a1 Prupe.8G065000_v2.0.a1 |
| pyrus_communis | pycom17g15510 pycom17g15520 |
| rosa_chinensis | RchiOBHm_Chr5g0043941 RchiOBHm_Chr6g0275901 |
| rosa_laevigata | RLG00000013424 RLG00000034225 |
| rosa_multiflora | Rmu_co8466095.1_g000001 Rmu_sc0002030.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00037140 Rroxscaffold_7G00192780 |
| rosa_rugosa | Rorug05G0209100 Rorug06G0097100 Rorug06G0097200 |
| rosa_samantha | Rh5BG301400 Rh5CG329000 Rh5DG310600 Rh6AG208900 Rh6BG213000 Rh6CG215600 Rh6DG205300 |
| rosa_wichuraiana | Rw0G017250 Rw5G027190 Rw6G018210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 3292 |
| Acc65I | GGTACC | 1 cut(s) | 2696 |
| AccB1I | GGYRCC | 2 cut(s) | 2696, 3032 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 668, 722, 968, 2706 |
| AccII | CGCG | 4 cut(s) | 96, 206, 3670, 3681 |
| AccIII | TCCGGA | 1 cut(s) | 349 |
| AciI | CCGC | 5 cut(s) | 5, 1142, 2007, 2790, 3679 |
| AclI | AACGTT | 1 cut(s) | 868 |
| AclWI | GGATC | 7 cut(s) | 8, 15, 591, 1133, 1146, 2875, 2946 |
| AcsI | RAATTY | 3 cut(s) | 1494, 1566, 2341 |
| AcuI | CTGAAG | 7 cut(s) | 612, 804, 1380, 1785, 2052, 2096, 3447 |
| AcyI | GRCGYC | 1 cut(s) | 3513 |
| AdeI | CACNNNGTG | 1 cut(s) | 791 |
| AfaI | GTAC | 9 cut(s) | 406, 1574, 2284, 2698, 2852, 3143, 3302, 3365, 3689 |
| AfeI | AGCGCT | 1 cut(s) | 1437 |
| AflII | CTTAAG | 1 cut(s) | 1939 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 996 |
| AhlI | ACTAGT | 1 cut(s) | 2603 |
| AjiI | CACGTC | 2 cut(s) | 241, 3571 |
| AjnI | CCWGG | 8 cut(s) | 661, 691, 757, 787, 931, 949, 1213, 1273 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3318, 3350 |
| Alw21I | GWGCWC | 1 cut(s) | 3724 |
| Alw26I | GTCTC | 6 cut(s) | 322, 422, 457, 565, 1359, 3551 |
| AlwI | GGATC | 7 cut(s) | 8, 15, 591, 1133, 1146, 2875, 2946 |
| Ama87I | CYCGRG | 2 cut(s) | 1028, 2327 |
| Aor13HI | TCCGGA | 1 cut(s) | 349 |
| Aor51HI | AGCGCT | 1 cut(s) | 1437 |
| AoxI | GGCC | 4 cut(s) | 1595, 1710, 3161, 3542 |
| ApoI | RAATTY | 3 cut(s) | 1494, 1566, 2341 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2947, 2979 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2307 |
| Asp718I | GGTACC | 1 cut(s) | 2696 |
| AspA2I | CCTAGG | 2 cut(s) | 221, 284 |
| AspLEI | GCGC | 4 cut(s) | 201, 1438, 3670, 3672 |
| AspS9I | GGNCC | 6 cut(s) | 415, 1016, 1478, 3161, 3543, 3676 |
| AsuC2I | CCSGG | 3 cut(s) | 807, 996, 3749 |
| AsuHPI | GGTGA | 3 cut(s) | 323, 2278, 3265 |
| AvaI | CYCGRG | 2 cut(s) | 1028, 2327 |
| AvaII | GGWCC | 4 cut(s) | 415, 1016, 1478, 3676 |
| AvrII | CCTAGG | 2 cut(s) | 221, 284 |
| AxyI | CCTNAGG | 1 cut(s) | 1230 |
| BaeGI | GKGCMC | 1 cut(s) | 1263 |
| BamHI | GGATCC | 1 cut(s) | 1138 |
| BanI | GGYRCC | 2 cut(s) | 2696, 3032 |
| BauI | CACGAG | 2 cut(s) | 1461, 1659 |
| BbsI | GAAGAC | 4 cut(s) | 603, 3423, 3516, 3765 |
| Bbv12I | GWGCWC | 1 cut(s) | 3724 |
| BbvCI | CCTCAGC | 1 cut(s) | 1439 |
| BceAI | ACGGC | 4 cut(s) | 447, 1270, 1889, 3471 |
| BciT130I | CCWGG | 8 cut(s) | 663, 693, 759, 789, 933, 951, 1215, 1275 |
| BciVI | GTATCC | 1 cut(s) | 1118 |
| BcnI | CCSGG | 3 cut(s) | 807, 996, 3749 |
| BcoDI | GTCTC | 6 cut(s) | 322, 422, 457, 565, 1359, 3551 |
| BcuI | ACTAGT | 1 cut(s) | 2603 |
| BfaI | CTAG | 7 cut(s) | 11, 222, 285, 2604, 2816, 3176, 3485 |
| BfmI | CTRYAG | 2 cut(s) | 2643, 2892 |
| BfoI | RGCGCY | 2 cut(s) | 202, 1439 |
| BfrI | CTTAAG | 1 cut(s) | 1939 |
| BfuAI | ACCTGC | 1 cut(s) | 3292 |
| BfuI | GTATCC | 1 cut(s) | 1118 |
| BglII | AGATCT | 2 cut(s) | 2458, 2688 |
| BlnI | CCTAGG | 2 cut(s) | 221, 284 |
| BlpI | GCTNAGC | 1 cut(s) | 195 |
| Bme18I | GGWCC | 4 cut(s) | 415, 1016, 1478, 3676 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 996 |
| BmeT110I | CYCGRG | 2 cut(s) | 1028, 2327 |
| BmgBI | CACGTC | 2 cut(s) | 241, 3571 |
| BmgT120I | GGNCC | 6 cut(s) | 415, 1016, 1478, 3161, 3543, 3676 |
| BmiI | GGNNCC | 3 cut(s) | 1140, 2698, 3034 |
| BpiI | GAAGAC | 4 cut(s) | 603, 3423, 3516, 3765 |
| BpmI | CTGGAG | 3 cut(s) | 645, 675, 2387 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1439, 1691, 3723 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 195 |
| BpuEI | CTTGAG | 2 cut(s) | 2243, 2447 |
| BpuMI | CCSGG | 3 cut(s) | 807, 996, 3749 |
| Bsa29I | ATCGAT | 3 cut(s) | 1752, 2870, 3003 |
| BsaAI | YACGTR | 1 cut(s) | 1152 |
| BsaBI | GATNNNNATC | 4 cut(s) | 12, 96, 165, 3065 |
| BsaHI | GRCGYC | 1 cut(s) | 3513 |
| BsaWI | WCCGGW | 3 cut(s) | 349, 2299, 3787 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 976, 1006, 3250, 3280, 3612, 3642 |
| Bse1I | ACTGG | 5 cut(s) | 184, 1885, 2022, 2224, 3695 |
| Bse21I | CCTNAGG | 1 cut(s) | 1230 |
| Bse3DI | GCAATG | 4 cut(s) | 468, 1502, 2792, 3144 |
| Bse8I | GATNNNNATC | 4 cut(s) | 12, 96, 165, 3065 |
| BseAI | TCCGGA | 1 cut(s) | 349 |
| BseBI | CCWGG | 8 cut(s) | 663, 693, 759, 789, 933, 951, 1215, 1275 |
| BseCI | ATCGAT | 3 cut(s) | 1752, 2870, 3003 |
| BseGI | GGATG | 7 cut(s) | 163, 397, 685, 2170, 3066, 3509, 3661 |
| BseJI | GATNNNNATC | 4 cut(s) | 12, 96, 165, 3065 |
| BseMI | GCAATG | 4 cut(s) | 468, 1502, 2792, 3144 |
| BseMII | CTCAG | 5 cut(s) | 47, 209, 1221, 1430, 3737 |
| BseNI | ACTGG | 5 cut(s) | 184, 1885, 2022, 2224, 3695 |
| BsePI | GCGCGC | 1 cut(s) | 3668 |
| BseRI | GAGGAG | 9 cut(s) | 167, 519, 522, 525, 583, 1407, 2386, 2916, 3555 |
| BseSI | GKGCMC | 1 cut(s) | 1263 |
| BseYI | CCCAGC | 1 cut(s) | 3494 |
| BsgI | GTGCAG | 2 cut(s) | 957, 1803 |
| Bsh1236I | CGCG | 4 cut(s) | 96, 206, 3670, 3681 |
| Bsh1285I | CGRYCG | 4 cut(s) | 94, 118, 2142, 3788 |
| BshFI | GGCC | 4 cut(s) | 1597, 1712, 3163, 3544 |
| BshNI | GGYRCC | 2 cut(s) | 2696, 3032 |
| BshVI | ATCGAT | 3 cut(s) | 1752, 2870, 3003 |
| BsiEI | CGRYCG | 4 cut(s) | 94, 118, 2142, 3788 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3724 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1028, 2327 |
| BsiSI | CCGG | 8 cut(s) | 350, 389, 807, 995, 2300, 3665, 3749, 3788 |
| BslFI | GGGAC | 4 cut(s) | 755, 848, 893, 2823 |
| BsmAI | GTCTC | 6 cut(s) | 322, 422, 457, 565, 1359, 3551 |
| BsmBI | CGTCTC | 1 cut(s) | 422 |
| BsmFI | GGGAC | 4 cut(s) | 755, 848, 893, 2823 |
| BsmI | GAATGC | 2 cut(s) | 2577, 3609 |
| BsnI | GGCC | 4 cut(s) | 1597, 1712, 3163, 3544 |
| BsoBI | CYCGRG | 2 cut(s) | 1028, 2327 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1263, 3724 |
| Bsp13I | TCCGGA | 1 cut(s) | 349 |
| Bsp1407I | TGTACA | 1 cut(s) | 1572 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 195 |
| Bsp19I | CCATGG | 1 cut(s) | 1203 |
| Bsp68I | TCGCGA | 1 cut(s) | 96 |
| BspACI | CCGC | 5 cut(s) | 5, 1142, 2007, 2790, 3679 |
| BspANI | GGCC | 4 cut(s) | 1597, 1712, 3163, 3544 |
| BspCNI | CTCAG | 5 cut(s) | 46, 208, 1222, 1431, 3736 |
| BspDI | ATCGAT | 3 cut(s) | 1752, 2870, 3003 |
| BspEI | TCCGGA | 1 cut(s) | 349 |
| BspFNI | CGCG | 4 cut(s) | 96, 206, 3670, 3681 |
| BspLI | GGNNCC | 3 cut(s) | 1140, 2698, 3034 |
| BspMI | ACCTGC | 1 cut(s) | 3292 |
| BspPI | GGATC | 7 cut(s) | 8, 15, 591, 1133, 1146, 2875, 2946 |
| BspQI | GCTCTTC | 3 cut(s) | 1089, 1341, 1356 |
| BspT107I | GGYRCC | 2 cut(s) | 2696, 3032 |
| BspTI | CTTAAG | 1 cut(s) | 1939 |
| BsrDI | GCAATG | 4 cut(s) | 468, 1502, 2792, 3144 |
| BsrGI | TGTACA | 1 cut(s) | 1572 |
| BsrI | ACTGG | 5 cut(s) | 184, 1885, 2022, 2224, 3695 |
| BssHII | GCGCGC | 1 cut(s) | 3668 |
| BssNI | GRCGYC | 1 cut(s) | 3513 |
| BssSI | CACGAG | 2 cut(s) | 1461, 1659 |
| BssT1I | CCWWGG | 5 cut(s) | 221, 284, 1203, 2948, 3516 |
| Bst2BI | CACGAG | 2 cut(s) | 1461, 1659 |
| Bst2UI | CCWGG | 8 cut(s) | 663, 693, 759, 789, 933, 951, 1215, 1275 |
| BstACI | GRCGYC | 1 cut(s) | 3513 |
| BstAFI | CTTAAG | 1 cut(s) | 1939 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 65 |
| BstAUI | TGTACA | 1 cut(s) | 1572 |
| BstBAI | YACGTR | 1 cut(s) | 1152 |
| BstC8I | GCNNGC | 7 cut(s) | 843, 1146, 1869, 2179, 2745, 3647, 3670 |
| BstDEI | CTNAG | 8 cut(s) | 33, 195, 1230, 1439, 1691, 1973, 2527, 3723 |
| BstDSI | CCRYGG | 4 cut(s) | 1012, 1203, 1240, 2107 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 690 |
| BstF5I | GGATG | 7 cut(s) | 163, 397, 685, 2170, 3066, 3509, 3661 |
| BstFNI | CGCG | 4 cut(s) | 96, 206, 3670, 3681 |
| BstH2I | RGCGCY | 2 cut(s) | 202, 1439 |
| BstHHI | GCGC | 4 cut(s) | 201, 1438, 3670, 3672 |
| BstMAI | GTCTC | 6 cut(s) | 322, 422, 457, 565, 1359, 3551 |
| BstMCI | CGRYCG | 4 cut(s) | 94, 118, 2142, 3788 |
| BstNI | CCWGG | 8 cut(s) | 663, 693, 759, 789, 933, 951, 1215, 1275 |
| BstNSI | RCATGY | 1 cut(s) | 3264 |
| BstSFI | CTRYAG | 2 cut(s) | 2643, 2892 |
| BstSLI | GKGCMC | 1 cut(s) | 1263 |
| BstSNI | TACGTA | 1 cut(s) | 1152 |
| BstUI | CGCG | 4 cut(s) | 96, 206, 3670, 3681 |
| BstV2I | GAAGAC | 4 cut(s) | 603, 3423, 3516, 3765 |
| BstX2I | RGATCY | 7 cut(s) | 7, 13, 583, 1138, 2458, 2688, 2938 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2693 |
| BstYI | RGATCY | 7 cut(s) | 7, 13, 583, 1138, 2458, 2688, 2938 |
| Bsu15I | ATCGAT | 3 cut(s) | 1752, 2870, 3003 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1230 |
| BsuI | GTATCC | 1 cut(s) | 1118 |
| BsuRI | GGCC | 4 cut(s) | 1597, 1712, 3163, 3544 |
| BsuTUI | ATCGAT | 3 cut(s) | 1752, 2870, 3003 |
| BtgI | CCRYGG | 4 cut(s) | 1012, 1203, 1240, 2107 |
| BtrI | CACGTC | 2 cut(s) | 241, 3571 |
| BtsCI | GGATG | 7 cut(s) | 163, 397, 685, 2170, 3066, 3509, 3661 |
| BtsI | GCAGTG | 1 cut(s) | 3588 |
| BtsIMutI | CAGTG | 5 cut(s) | 177, 1795, 2015, 2279, 3588 |
| BtuMI | TCGCGA | 1 cut(s) | 96 |
| BveI | ACCTGC | 1 cut(s) | 3292 |
| Cac8I | GCNNGC | 7 cut(s) | 843, 1146, 1869, 2179, 2745, 3647, 3670 |
| CfoI | GCGC | 4 cut(s) | 201, 1438, 3670, 3672 |
| Cfr13I | GGNCC | 6 cut(s) | 415, 1016, 1478, 3161, 3543, 3676 |
| ClaI | ATCGAT | 3 cut(s) | 1752, 2870, 3003 |
| CseI | GACGC | 5 cut(s) | 195, 851, 1721, 3428, 3521 |
| CsiI | ACCWGGT | 2 cut(s) | 757, 787 |
| Csp6I | GTAC | 9 cut(s) | 405, 1573, 2283, 2697, 2851, 3142, 3301, 3364, 3688 |
| CviAII | CATG | 9 cut(s) | 1108, 1204, 1510, 1863, 1967, 2200, 2978, 3261, 3427 |
| CviQI | GTAC | 9 cut(s) | 405, 1573, 2283, 2697, 2851, 3142, 3301, 3364, 3688 |
| DdeI | CTNAG | 8 cut(s) | 33, 195, 1230, 1439, 1691, 1973, 2527, 3723 |
| DraI | TTTAAA | 2 cut(s) | 280, 2886 |
| DraIII | CACNNNGTG | 1 cut(s) | 791 |
| DriI | GACNNNNNGTC | 1 cut(s) | 996 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 996 |
| EciI | GGCGGA | 2 cut(s) | 20, 1131 |
| Eco105I | TACGTA | 1 cut(s) | 1152 |
| Eco130I | CCWWGG | 5 cut(s) | 221, 284, 1203, 2948, 3516 |
| Eco147I | AGGCCT | 1 cut(s) | 1597 |
| Eco32I | GATATC | 1 cut(s) | 1063 |
| Eco47I | GGWCC | 4 cut(s) | 415, 1016, 1478, 3676 |
| Eco47III | AGCGCT | 1 cut(s) | 1437 |
| Eco57I | CTGAAG | 7 cut(s) | 612, 804, 1380, 1785, 2052, 2096, 3447 |
| Eco81I | CCTNAGG | 1 cut(s) | 1230 |
| Eco88I | CYCGRG | 2 cut(s) | 1028, 2327 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 690 |
| EcoRI | GAATTC | 1 cut(s) | 1566 |
| EcoRII | CCWGG | 8 cut(s) | 661, 691, 757, 787, 931, 949, 1213, 1273 |
| EcoRV | GATATC | 1 cut(s) | 1063 |
| EcoT14I | CCWWGG | 5 cut(s) | 221, 284, 1203, 2948, 3516 |
| ErhI | CCWWGG | 5 cut(s) | 221, 284, 1203, 2948, 3516 |
| Esp3I | CGTCTC | 1 cut(s) | 422 |
| FaeI | CATG | 9 cut(s) | 1111, 1207, 1513, 1866, 1970, 2203, 2981, 3264, 3430 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 48, 80 |
| FaqI | GGGAC | 4 cut(s) | 755, 848, 893, 2823 |
| FatI | CATG | 9 cut(s) | 1107, 1203, 1509, 1862, 1966, 2199, 2977, 3260, 3426 |
| FauNDI | CATATG | 3 cut(s) | 420, 2047, 3477 |
| FokI | GGATG | 7 cut(s) | 170, 404, 692, 2177, 3073, 3516, 3648 |
| FspBI | CTAG | 7 cut(s) | 11, 222, 285, 2604, 2816, 3176, 3485 |
| GlaI | GCGC | 4 cut(s) | 200, 1437, 3669, 3671 |
| GsaI | CCCAGC | 1 cut(s) | 3498 |
| GsuI | CTGGAG | 3 cut(s) | 645, 675, 2387 |
| HaeII | RGCGCY | 2 cut(s) | 202, 1439 |
| HaeIII | GGCC | 4 cut(s) | 1597, 1712, 3163, 3544 |
| HapII | CCGG | 8 cut(s) | 350, 389, 807, 995, 2300, 3665, 3749, 3788 |
| HgaI | GACGC | 5 cut(s) | 195, 851, 1721, 3428, 3521 |
| HhaI | GCGC | 4 cut(s) | 201, 1438, 3670, 3672 |
| Hin1I | GRCGYC | 1 cut(s) | 3513 |
| Hin1II | CATG | 9 cut(s) | 1111, 1207, 1513, 1866, 1970, 2203, 2981, 3264, 3430 |
| Hin6I | GCGC | 4 cut(s) | 199, 1436, 3668, 3670 |
| HinP1I | GCGC | 4 cut(s) | 199, 1436, 3668, 3670 |
| HincII | GTYRAC | 3 cut(s) | 866, 3130, 3795 |
| HindII | GTYRAC | 3 cut(s) | 866, 3130, 3795 |
| HpaII | CCGG | 8 cut(s) | 350, 389, 807, 995, 2300, 3665, 3749, 3788 |
| HphI | GGTGA | 3 cut(s) | 323, 2278, 3265 |
| Hpy166II | GTNNAC | 8 cut(s) | 866, 1466, 1606, 2477, 3130, 3523, 3688, 3795 |
| Hpy8I | GTNNAC | 8 cut(s) | 866, 1466, 1606, 2477, 3130, 3523, 3688, 3795 |
| Hpy99I | CGWCG | 3 cut(s) | 242, 2490, 3120 |
| HpyF3I | CTNAG | 8 cut(s) | 33, 195, 1230, 1439, 1691, 1973, 2527, 3723 |
| Hsp92I | GRCGYC | 1 cut(s) | 3513 |
| Hsp92II | CATG | 9 cut(s) | 1111, 1207, 1513, 1866, 1970, 2203, 2981, 3264, 3430 |
| HspAI | GCGC | 4 cut(s) | 199, 1436, 3668, 3670 |
| Kpn2I | TCCGGA | 1 cut(s) | 349 |
| KpnI | GGTACC | 1 cut(s) | 2700 |
| LguI | GCTCTTC | 3 cut(s) | 1089, 1341, 1356 |
| LmnI | GCTCC | 7 cut(s) | 223, 532, 664, 688, 2047, 2531, 3620 |
| MabI | ACCWGGT | 2 cut(s) | 757, 787 |
| MaeI | CTAG | 7 cut(s) | 11, 222, 285, 2604, 2816, 3176, 3485 |
| MfeI | CAATTG | 1 cut(s) | 963 |
| MflI | RGATCY | 7 cut(s) | 7, 13, 583, 1138, 2458, 2688, 2938 |
| MhlI | GDGCHC | 2 cut(s) | 1263, 3724 |
| MlyI | GAGTC | 6 cut(s) | 324, 459, 933, 985, 2917, 3618 |
| MmeI | TCCRAC | 2 cut(s) | 1013, 2535 |
| MroI | TCCGGA | 1 cut(s) | 349 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2307 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2817 |
| MspA1I | CMGCKG | 3 cut(s) | 1703, 3467, 3626 |
| MspCI | CTTAAG | 1 cut(s) | 1939 |
| MspI | CCGG | 8 cut(s) | 350, 389, 807, 995, 2300, 3665, 3749, 3788 |
| MunI | CAATTG | 1 cut(s) | 963 |
| Mva1269I | GAATGC | 2 cut(s) | 2577, 3609 |
| MvaI | CCWGG | 8 cut(s) | 663, 693, 759, 789, 933, 951, 1215, 1275 |
| MvnI | CGCG | 4 cut(s) | 96, 206, 3670, 3681 |
| NciI | CCSGG | 3 cut(s) | 807, 996, 3749 |
| NcoI | CCATGG | 1 cut(s) | 1203 |
| NdeI | CATATG | 3 cut(s) | 420, 2047, 3477 |
| NlaIII | CATG | 9 cut(s) | 1111, 1207, 1513, 1866, 1970, 2203, 2981, 3264, 3430 |
| NlaIV | GGNNCC | 3 cut(s) | 1140, 2698, 3034 |
| NmeAIII | GCCGAG | 1 cut(s) | 3061 |
| NmuCI | GTSAC | 5 cut(s) | 766, 925, 2013, 2518, 2606 |
| NruI | TCGCGA | 1 cut(s) | 96 |
| NspI | RCATGY | 1 cut(s) | 3264 |
| PauI | GCGCGC | 1 cut(s) | 3668 |
| PceI | AGGCCT | 1 cut(s) | 1597 |
| PciSI | GCTCTTC | 3 cut(s) | 1089, 1341, 1356 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 111, 264, 392, 3217 |
| PctI | GAATGC | 2 cut(s) | 2577, 3609 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2307 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 668, 722, 968, 2706 |
| Ple19I | CGATCG | 2 cut(s) | 94, 2142 |
| PleI | GAGTC | 6 cut(s) | 324, 459, 932, 985, 2917, 3617 |
| PpsI | GAGTC | 6 cut(s) | 324, 459, 932, 985, 2917, 3617 |
| Ppu21I | YACGTR | 1 cut(s) | 1152 |
| Psp1406I | AACGTT | 1 cut(s) | 868 |
| Psp6I | CCWGG | 8 cut(s) | 661, 691, 757, 787, 931, 949, 1213, 1273 |
| PspFI | CCCAGC | 1 cut(s) | 3494 |
| PspGI | CCWGG | 8 cut(s) | 661, 691, 757, 787, 931, 949, 1213, 1273 |
| PspN4I | GGNNCC | 3 cut(s) | 1140, 2698, 3034 |
| PspPI | GGNCC | 6 cut(s) | 415, 1016, 1478, 3161, 3543, 3676 |
| PsuI | RGATCY | 7 cut(s) | 7, 13, 583, 1138, 2458, 2688, 2938 |
| PteI | GCGCGC | 1 cut(s) | 3668 |
| PvuI | CGATCG | 2 cut(s) | 94, 2142 |
| PvuII | CAGCTG | 3 cut(s) | 1703, 3467, 3626 |
| RruI | TCGCGA | 1 cut(s) | 96 |
| RsaI | GTAC | 9 cut(s) | 406, 1574, 2284, 2698, 2852, 3143, 3302, 3365, 3689 |
| RsaNI | GTAC | 9 cut(s) | 405, 1573, 2283, 2697, 2851, 3142, 3301, 3364, 3688 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2817 |
| SapI | GCTCTTC | 3 cut(s) | 1089, 1341, 1356 |
| Sau96I | GGNCC | 6 cut(s) | 415, 1016, 1478, 3161, 3543, 3676 |
| SchI | GAGTC | 6 cut(s) | 324, 459, 933, 985, 2917, 3618 |
| SduI | GDGCHC | 2 cut(s) | 1263, 3724 |
| SexAI | ACCWGGT | 2 cut(s) | 757, 787 |
| SfcI | CTRYAG | 2 cut(s) | 2643, 2892 |
| SinI | GGWCC | 4 cut(s) | 415, 1016, 1478, 3676 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2817 |
| SmlI | CTYRAG | 3 cut(s) | 1939, 2258, 2462 |
| SmoI | CTYRAG | 3 cut(s) | 1939, 2258, 2462 |
| SnaBI | TACGTA | 1 cut(s) | 1152 |
| SpeI | ACTAGT | 1 cut(s) | 2603 |
| SseBI | AGGCCT | 1 cut(s) | 1597 |
| SsiI | CCGC | 5 cut(s) | 5, 1142, 2007, 2790, 3679 |
| SspMI | CTAG | 7 cut(s) | 11, 222, 285, 2604, 2816, 3176, 3485 |
| StuI | AGGCCT | 1 cut(s) | 1597 |
| StyI | CCWWGG | 5 cut(s) | 221, 284, 1203, 2948, 3516 |
| TatI | WGTACW | 4 cut(s) | 1572, 2282, 3363, 3687 |
| TscAI | CASTG | 5 cut(s) | 184, 1795, 2022, 2279, 3588 |
| TseFI | GTSAC | 5 cut(s) | 766, 925, 2013, 2518, 2606 |
| Tsp45I | GTSAC | 5 cut(s) | 766, 925, 2013, 2518, 2606 |
| TspGWI | ACGGA | 4 cut(s) | 61, 120, 428, 1001 |
| TspRI | CASTG | 5 cut(s) | 184, 1795, 2022, 2279, 3588 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 668, 722, 968, 2706 |
| Vha464I | CTTAAG | 1 cut(s) | 1939 |
| VpaK11BI | GGWCC | 4 cut(s) | 415, 1016, 1478, 3676 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 690 |
| XapI | RAATTY | 3 cut(s) | 1494, 1566, 2341 |
| XbaI | TCTAGA | 1 cut(s) | 10 |
| XceI | RCATGY | 1 cut(s) | 3264 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3054 |
| XmaJI | CCTAGG | 2 cut(s) | 221, 284 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2307 |
| XspI | CTAG | 7 cut(s) | 11, 222, 285, 2604, 2816, 3176, 3485 |