Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0005046

Physical Location & Seq

Genomic Coordinates Reverse (-)

38784975 .. 38788722

Gene Structure 3748 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034225

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGATTCCGGTGGAGAATCGTGGACAGATGTTTGATTTGCCTAAGGAGCTGCCGGATGGGGTGGCCCTGCGGCCGGAGGATTACCAGTTCTTTGGGGCATTGATGAATGAGGAAGAGAATGAGGACTTGTCTGCCGAGGAGGTGAAAGATAGGAGGATTATGAAGCTTTTGCTCAAGGTTAAGAATGGCACGCCGCAGCAGAGGAAGGCAGCATTGAGGCAGATCACTGAGAAGGCTGTTGAGTTTGGTGCCGGGCCGTTGTTTGACCGCATTCTGCCTTTGCTGATGCAACAGAATGGATCAGACATGGACCAGGAGAGGCATCTTCTTGGTATTGATGAAATTGAGGAATATGTCAGGAATACTACTGCTAGGGCTTTCAGTGTTGTGGCTTATGCTGTAGGTATTCCTGCACTCTTGCCGTTTGTGAAAGCTGTGTGCCAGAGCAAGAAATCATGGATGGCACGGCACACTGGGATCAAGATTGTTCAGCAGATTGGCATCTTGATTGGGCCGGCTGTTCTTCCCCACTTGAAGTCGCTGGTGGATATTATAGAACACGGTCTCAGTGATGAAAATCAGAGGGTCCGGACAATTACTGCACTATCTCTTGCTGCTCTAGCTGAGGCTGCTGCCCCATATGGTATTGAAAGCTTTGACAATGTATTGAAGCCATTGTGGCAGGGTACTAGGACTCACCGTGGTAAGGTTTTGGCCGCATTCTTGAAGGCAATTGGTTTTGTTATTCCTCTTATGGATGAAAAGTATGCGAGTTACTATACAAAGGAAGTGATGGTTATTTTAATTCGAGAATTCAAGTCTCCTGATGAAGAAATGAAGAAAATTGTGCTTAAAGTGGTGAAACAATGTGTAAATACAGACGGTGTAGAGCCTGAATACATAAGACATCATATTCTTCCCGAGTTCTTCAGTGACTTTTGGATTAGAAGGATGGCTTTGGATAGAAGAAACTACAGGCAACTAGTTGAAACAACTGTGGAGCTAGCAAACAAAGTGGGTGCTTCTGATGTAATAGGGAGAATTGTTGAGGATCTCAAAGATGACAGTGAACCGTATAGACAAATGGTTGTAGAGACAATTGAGAAGGTGGTTGTAAATTTAGGTGCTTCTGATATTCATCATAGATTGGAGGAGCTTCTCATTGATGGTATTCTTTACGCCTTCCAAGAGCAGACCAGTGACTATGCAAATGTGCTGCTTAGTGGGTTTGGTGCGGTTGTGAATTCTCTTGGCCAAAGGGTGAAATCATACCTTCCCCAGATTTGTGGTATCATCAAGTGGCGCTTGAATAACAAGAGTGCAAAGGTCAGACAGCAAGCTGCAGATCTTATTTCAAGGATTGCTGTGGTCATGAAGATATGCCAAGAGGAACAACTGATGGCTCATCTCGGTGTTGTCTTGTACGAGTATTTGGGAGAAGAGTACCCTGAAGTTCTAGGATCAATTCTGGGAGCATTGAAGGCAATTGTCAATGTTATTGGTATGACAAAGATGACTCTTCCTATAAAGGATTTGATTCCCAGGTTGGCTCCAATTCTGAAGAATAGGCATGAGAAAGTTCAGGAGAACTGTATTGACCTTGTTGGTCGCATTGCTGACCGCGGTGCTGAGTTTGTTCCAGCGAGGGAGTGGATGAGGATCTGTTTTGAGCTTCTTGAGATGCTGAAAGCTCATAAGAAGGGTATCCGGCGAGCTAGTGTGAACACTTTTGGGTACATTGCAAAAGCCATTGGCCCACAAGATGTCCTGGCAACTCTCCTGAATAATCTCAAGGTGCAGGAGCGTCAGAATCGTGTTTGCACGACTGTAGCAATTGCAATAGTAGCTGAAACATGCGCTCCTTTTACGGTTCTGCCTGCTCTGATGAATGAGTACTGTGTTCCAGAGCTTAATGTGCGGAATGGTGTTTTGAAATCCCTCTCTTTCATTTTTGAGTACATTGGTGAAACGGGGAAAGAATATATATATGCAGTGACCCCGTTGCTTGAGGATGCCCTCATGGACAGAGATCTGGTTCACAGGCAAACTGCAGCTTCTGTTGTCAAGCACATGGCTTTAGGAGTAGCTGGATTGGGTTGTGAGGAGGCGTTAGTCCACTTGCTGAACTATGTCTGGCCAAACATATTTGAGACATCCCCACATGTTATAAATGCTGTTATGGAAGCCATTGAAGGGATGAGGGTGGCTTTGGGTCCTGCTGTTGTTCTCAATTACTGTCTCCAGGGGCTGTTCCATCCTGCTAGGAAGGTTAGGGAGGCGTACTGGAAGATTTACAACTCACTGTATATTGGAGCTCAAGATGCTCTTGTGGCAGCCTACCCTTTGCTGGAGGACGAGGAGCATAATGTGTATGCTAGGCCAGAGCTGACAATGTTCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

SF3b1

Protein Analysis

801

Amino Acids

90.04

Weight (kDa)

6.13

Isoelectric Point (pI)

36.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOR1L1_N	PF24714	361 - 582	2.5e-08	TORTIFOLIA1 N-terminal
PPP2R1A-like_HEAT	PF22646	582 - 654	6.3e-19	PPP2R1A-like HEAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005046)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64270
fragaria_vesca	FvH4_2g14010 FvH4_3g24440
malus_domestica	MD17G1162000.v1.1 MD17G1162100.v1.1
prunus_persica	Prupe.8G065000_v2.0.a1 Prupe.8G065000_v2.0.a1
pyrus_communis	pycom17g15510 pycom17g15520
rosa_chinensis	RchiOBHm_Chr5g0043941 RchiOBHm_Chr6g0275901
rosa_laevigata	RLG00000013424 RLG00000034225
rosa_multiflora	Rmu_co8466095.1_g000001 Rmu_sc0002030.1_g000005
rosa_roxburghii	Rroxscaffold_1G00037140 Rroxscaffold_7G00192780
rosa_rugosa	Rorug05G0209100 Rorug06G0097100 Rorug06G0097200
rosa_samantha	Rh5BG301400 Rh5CG329000 Rh5DG310600 Rh6AG208900 Rh6BG213000 Rh6CG215600 Rh6DG205300
rosa_wichuraiana	Rw0G017250 Rw5G027190 Rw6G018210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2168
AccB1I	GGYRCC	1 cut(s)	248
AccII	CGCG	1 cut(s)	1623
AccIII	TCCGGA	1 cut(s)	588
AciI	CCGC	8 cut(s)	70, 194, 268, 717, 1235, 1621, 1623, 1918
AclWI	GGATC	5 cut(s)	307, 485, 1059, 1468, 1667
AcoI	YGGCCR	4 cut(s)	71, 714, 1252, 2135
AcsI	RAATTY	3 cut(s)	812, 1117, 1243
AcuI	CTGAAG	3 cut(s)	913, 1470, 1580
AfaI	GTAC	7 cut(s)	688, 1424, 1445, 1736, 1895, 1958, 2282
AfiI	CCNNNNNNNGG	4 cut(s)	73, 706, 2193, 2347
AflIII	ACRYGT	1 cut(s)	2161
AhlI	ACTAGT	1 cut(s)	982
AjnI	CCWGG	4 cut(s)	312, 1541, 1767, 2241
AloI	GAACNNNNNNTCC	2 cut(s)	71, 103
Alw21I	GWGCWC	1 cut(s)	2317
Alw26I	GTCTC	5 cut(s)	569, 825, 1088, 2144, 2243
AlwI	GGATC	5 cut(s)	307, 485, 1059, 1468, 1667
AlwNI	CAGNNNCTG	2 cut(s)	2057, 2248
Ama87I	CYCGRG	1 cut(s)	920
Aor13HI	TCCGGA	1 cut(s)	588
AoxI	GGCC	9 cut(s)	63, 71, 254, 512, 714, 1252, 1753, 2135, 2378
ApoI	RAATTY	3 cut(s)	812, 1117, 1243
AspLEI	GCGC	2 cut(s)	1305, 1859
AspS9I	GGNCC	7 cut(s)	64, 254, 310, 512, 586, 1754, 2213
AsuC2I	CCSGG	1 cut(s)	253
AsuHPI	GGTGA	5 cut(s)	154, 689, 871, 1273, 1976
AsuNHI	GCTAGC	1 cut(s)	1003
AvaI	CYCGRG	1 cut(s)	920
AvaII	GGWCC	3 cut(s)	310, 586, 2213
AxyI	CCTNAGG	1 cut(s)	42
BalI	TGGCCA	2 cut(s)	1254, 2137
BanI	GGYRCC	1 cut(s)	248
BanII	GRGCYC	1 cut(s)	2317
Bbv12I	GWGCWC	1 cut(s)	2317
BbvCI	CCTCAGC	1 cut(s)	624
BccI	CCATC	7 cut(s)	50, 454, 787, 946, 1160, 1393, 2262
BceAI	ACGGC	3 cut(s)	241, 406, 482
BciT130I	CCWGG	4 cut(s)	314, 1543, 1769, 2243
BciVI	GTATCC	1 cut(s)	1715
BcnI	CCSGG	1 cut(s)	253
BcoDI	GTCTC	5 cut(s)	569, 825, 1088, 2144, 2243
BcuI	ACTAGT	1 cut(s)	982
BfaI	CTAG	9 cut(s)	372, 620, 690, 983, 1004, 1457, 1716, 2262, 2376
BfmI	CTRYAG	5 cut(s)	399, 973, 1341, 1827, 2049
BfoI	RGCGCY	1 cut(s)	1306
BfuI	GTATCC	1 cut(s)	1715
BglI	GCCNNNNNGGC	1 cut(s)	679
BglII	AGATCT	2 cut(s)	1345, 2029
BmcAI	AGTACT	1 cut(s)	1895
Bme1390I	CCNGG	5 cut(s)	253, 314, 1543, 1769, 2243
Bme18I	GGWCC	3 cut(s)	310, 586, 2213
BmeT110I	CYCGRG	1 cut(s)	920
BmgT120I	GGNCC	7 cut(s)	64, 254, 310, 512, 586, 1754, 2213
BmiI	GGNNCC	4 cut(s)	250, 587, 1551, 2214
BmrFI	CCNGG	5 cut(s)	253, 314, 1543, 1769, 2243
BmrI	ACTGGG	1 cut(s)	483
BmsI	GCATC	6 cut(s)	276, 331, 510, 1671, 2002, 2311
BmtI	GCTAGC	1 cut(s)	1007
BmuI	ACTGGG	1 cut(s)	483
BpmI	CTGGAG	2 cut(s)	2225, 2369
Bpu10I	CCTNAGC	1 cut(s)	624
BpuEI	CTTGAG	5 cut(s)	158, 1697, 1775, 2027, 2301
BpuMI	CCSGG	1 cut(s)	253
BsaBI	GATNNNNATC	4 cut(s)	500, 576, 1137, 1658
BsaI	GGTCTC	1 cut(s)	569
BsaJI	CCNNGG	5 cut(s)	135, 700, 1541, 1621, 2242
BsaWI	WCCGGW	2 cut(s)	7, 588
BsaXI	ACNNNNNCTCC	2 cut(s)	1843, 1873
Bsc4I	CCNNNNNNNGG	4 cut(s)	73, 706, 2193, 2347
Bse118I	RCCGGY	1 cut(s)	514
Bse1I	ACTGG	4 cut(s)	85, 478, 1197, 2288
Bse21I	CCTNAGG	1 cut(s)	42
Bse3DI	GCAATG	2 cut(s)	1611, 1737
Bse8I	GATNNNNATC	4 cut(s)	500, 576, 1137, 1658
BseAI	TCCGGA	1 cut(s)	588
BseBI	CCWGG	4 cut(s)	314, 1543, 1769, 2243
BseDI	CCNNGG	5 cut(s)	135, 700, 1541, 1621, 2242
BseGI	GGATG	9 cut(s)	61, 465, 763, 957, 1659, 2017, 2153, 2202, 2254
BseJI	GATNNNNATC	4 cut(s)	500, 576, 1137, 1658
BseLI	CCNNNNNNNGG	4 cut(s)	73, 706, 2193, 2347
BseMI	GCAATG	2 cut(s)	1611, 1737
BseMII	CTCAG	4 cut(s)	219, 580, 615, 1620
BseNI	ACTGG	4 cut(s)	85, 478, 1197, 2288
BseRI	GAGGAG	4 cut(s)	152, 1166, 2117, 2372
BseX3I	CGGCCG	1 cut(s)	71
BsgI	GTGCAG	3 cut(s)	396, 585, 1817
Bsh1236I	CGCG	1 cut(s)	1623
Bsh1285I	CGRYCG	1 cut(s)	74
BshFI	GGCC	9 cut(s)	65, 73, 256, 514, 716, 1254, 1755, 2137, 2380
BshNI	GGYRCC	1 cut(s)	248
BsiEI	CGRYCG	1 cut(s)	74
BsiHKAI	GWGCWC	1 cut(s)	2317
BsiHKCI	CYCGRG	1 cut(s)	920
BsiSI	CCGG	7 cut(s)	8, 53, 74, 252, 515, 589, 1708
BslI	CCNNNNNNNGG	4 cut(s)	73, 706, 2193, 2347
BsmAI	GTCTC	5 cut(s)	569, 825, 1088, 2144, 2243
BsmI	GAATGC	2 cut(s)	270, 719
BsnI	GGCC	9 cut(s)	65, 73, 256, 514, 716, 1254, 1755, 2137, 2380
Bso31I	GGTCTC	1 cut(s)	569
BsoBI	CYCGRG	1 cut(s)	920
Bsp1286I	GDGCHC	1 cut(s)	2317
Bsp13I	TCCGGA	1 cut(s)	588
Bsp143I	GATC	8 cut(s)	222, 299, 477, 1051, 1345, 1460, 1659, 2029
BspACI	CCGC	8 cut(s)	70, 194, 268, 717, 1235, 1621, 1623, 1918
BspANI	GGCC	9 cut(s)	65, 73, 256, 514, 716, 1254, 1755, 2137, 2380
BspCNI	CTCAG	4 cut(s)	220, 579, 616, 1621
BspEI	TCCGGA	1 cut(s)	588
BspFNI	CGCG	1 cut(s)	1623
BspHI	TCATGA	1 cut(s)	1371
BspLI	GGNNCC	4 cut(s)	250, 587, 1551, 2214
BspMAI	CTGCAG	2 cut(s)	1345, 2053
BspOI	GCTAGC	1 cut(s)	1007
BspPI	GGATC	5 cut(s)	307, 485, 1059, 1468, 1667
BspT107I	GGYRCC	1 cut(s)	248
BspTNI	GGTCTC	1 cut(s)	569
BsrDI	GCAATG	2 cut(s)	1611, 1737
BsrFI	RCCGGY	1 cut(s)	514
BsrI	ACTGG	4 cut(s)	85, 478, 1197, 2288
BssAI	RCCGGY	1 cut(s)	514
BssECI	CCNNGG	5 cut(s)	135, 700, 1541, 1621, 2242
BssMI	GATC	8 cut(s)	222, 299, 477, 1051, 1345, 1460, 1659, 2029
Bst2UI	CCWGG	4 cut(s)	314, 1543, 1769, 2243
Bst6I	CTCTTC	3 cut(s)	108, 1434, 1524
BstC8I	GCNNGC	6 cut(s)	191, 516, 1005, 1338, 1713, 1878
BstDEI	CTNAG	6 cut(s)	42, 228, 566, 624, 1220, 1629
BstDSI	CCRYGG	2 cut(s)	700, 1621
BstF5I	GGATG	9 cut(s)	61, 465, 763, 957, 1659, 2017, 2153, 2202, 2254
BstFNI	CGCG	1 cut(s)	1623
BstH2I	RGCGCY	1 cut(s)	1306
BstHHI	GCGC	2 cut(s)	1305, 1859
BstKTI	GATC	8 cut(s)	225, 302, 480, 1054, 1348, 1463, 1662, 2032
BstMAI	GTCTC	5 cut(s)	569, 825, 1088, 2144, 2243
BstMBI	GATC	8 cut(s)	222, 299, 477, 1051, 1345, 1460, 1659, 2029
BstMCI	CGRYCG	1 cut(s)	74
BstMWI	GCNNNNNNNGC	9 cut(s)	46, 620, 629, 679, 1481, 1844, 1915, 2321, 2330
BstNI	CCWGG	4 cut(s)	314, 1543, 1769, 2243
BstNSI	RCATGY	2 cut(s)	1857, 2165
BstSCI	CCNGG	5 cut(s)	251, 312, 1541, 1767, 2241
BstSFI	CTRYAG	5 cut(s)	399, 973, 1341, 1827, 2049
BstUI	CGCG	1 cut(s)	1623
BstX2I	RGATCY	4 cut(s)	1051, 1345, 1659, 2029
BstXI	CCANNNNNNTGG	2 cut(s)	92, 1286
BstYI	RGATCY	4 cut(s)	1051, 1345, 1659, 2029
BstZI	CGGCCG	1 cut(s)	71
Bsu36I	CCTNAGG	1 cut(s)	42
BsuI	GTATCC	1 cut(s)	1715
BsuRI	GGCC	9 cut(s)	65, 73, 256, 514, 716, 1254, 1755, 2137, 2380
BtgI	CCRYGG	2 cut(s)	700, 1621
BtsCI	GGATG	9 cut(s)	61, 465, 763, 957, 1659, 2017, 2153, 2202, 2254
BtsI	GCAGTG	1 cut(s)	1998
BtsIMutI	CAGTG	9 cut(s)	225, 388, 471, 574, 937, 1072, 1204, 1998, 2300
Cac8I	GCNNGC	6 cut(s)	191, 516, 1005, 1338, 1713, 1878
CaiI	CAGNNNCTG	2 cut(s)	2057, 2248
CciI	TCATGA	1 cut(s)	1371
CfoI	GCGC	2 cut(s)	1305, 1859
Cfr10I	RCCGGY	1 cut(s)	514
Cfr13I	GGNCC	7 cut(s)	64, 254, 310, 512, 586, 1754, 2213
Cfr42I	CCGCGG	1 cut(s)	1624
CseI	GACGC	1 cut(s)	1793
Csp6I	GTAC	7 cut(s)	687, 1423, 1444, 1735, 1894, 1957, 2281
CspCI	CAANNNNNGTGG	2 cut(s)	996, 1031
CviAII	CATG	8 cut(s)	307, 456, 1372, 1571, 1854, 2020, 2071, 2162
CviQI	GTAC	7 cut(s)	687, 1423, 1444, 1735, 1894, 1957, 2281
DdeI	CTNAG	6 cut(s)	42, 228, 566, 624, 1220, 1629
DpnI	GATC	8 cut(s)	224, 301, 479, 1053, 1347, 1462, 1661, 2031
DpnII	GATC	8 cut(s)	222, 299, 477, 1051, 1345, 1460, 1659, 2029
EaeI	YGGCCR	4 cut(s)	71, 714, 1252, 2135
EagI	CGGCCG	1 cut(s)	71
Eam1104I	CTCTTC	3 cut(s)	108, 1434, 1524
EarI	CTCTTC	3 cut(s)	108, 1434, 1524
Ecl136II	GAGCTC	1 cut(s)	2315
EclXI	CGGCCG	1 cut(s)	71
Eco24I	GRGCYC	1 cut(s)	2317
Eco31I	GGTCTC	1 cut(s)	569
Eco47I	GGWCC	3 cut(s)	310, 586, 2213
Eco52I	CGGCCG	1 cut(s)	71
Eco53kI	GAGCTC	1 cut(s)	2315
Eco57I	CTGAAG	3 cut(s)	913, 1470, 1580
Eco81I	CCTNAGG	1 cut(s)	42
Eco88I	CYCGRG	1 cut(s)	920
EcoICRI	GAGCTC	1 cut(s)	2315
EcoO109I	RGGNCCY	1 cut(s)	2213
EcoRI	GAATTC	2 cut(s)	812, 1243
EcoRII	CCWGG	4 cut(s)	312, 1541, 1767, 2241
EcoT38I	GRGCYC	1 cut(s)	2317
FaeI	CATG	8 cut(s)	310, 459, 1375, 1574, 1857, 2023, 2074, 2165
FalI	AAGNNNNNCTT	6 cut(s)	940, 972, 1289, 1321, 2310, 2342
FatI	CATG	8 cut(s)	306, 455, 1371, 1570, 1853, 2019, 2070, 2161
FauNDI	CATATG	2 cut(s)	640, 2399
FokI	GGATG	9 cut(s)	68, 472, 770, 964, 1666, 2024, 2140, 2209, 2241
FriOI	GRGCYC	1 cut(s)	2317
FspBI	CTAG	9 cut(s)	372, 620, 690, 983, 1004, 1457, 1716, 2262, 2376
GlaI	GCGC	2 cut(s)	1304, 1858
GsuI	CTGGAG	2 cut(s)	2225, 2369
HaeII	RGCGCY	1 cut(s)	1306
HaeIII	GGCC	9 cut(s)	65, 73, 256, 514, 716, 1254, 1755, 2137, 2380
HapII	CCGG	7 cut(s)	8, 53, 74, 252, 515, 589, 1708
HgaI	GACGC	1 cut(s)	1793
HhaI	GCGC	2 cut(s)	1305, 1859
Hin1II	CATG	8 cut(s)	310, 459, 1375, 1574, 1857, 2023, 2074, 2165
Hin6I	GCGC	2 cut(s)	1303, 1857
HinP1I	GCGC	2 cut(s)	1303, 1857
HindIII	AAGCTT	2 cut(s)	164, 652
HinfI	GANTC	6 cut(s)	4, 16, 694, 1516, 1537, 1810
HpaII	CCGG	7 cut(s)	8, 53, 74, 252, 515, 589, 1708
HphI	GGTGA	5 cut(s)	154, 689, 871, 1273, 1976
Hpy166II	GTNNAC	5 cut(s)	23, 1070, 1723, 2038, 2116
Hpy188I	TCNGA	8 cut(s)	304, 582, 1027, 1132, 1331, 1560, 1809, 1884
Hpy8I	GTNNAC	5 cut(s)	23, 1070, 1723, 2038, 2116
HpyF10VI	GCNNNNNNNGC	9 cut(s)	46, 620, 629, 679, 1481, 1844, 1915, 2321, 2330
HpyF3I	CTNAG	6 cut(s)	42, 228, 566, 624, 1220, 1629
Hsp92II	CATG	8 cut(s)	310, 459, 1375, 1574, 1857, 2023, 2074, 2165
HspAI	GCGC	2 cut(s)	1303, 1857
Kpn2I	TCCGGA	1 cut(s)	588
KroI	GCCGGC	1 cut(s)	514
KroNI	GCCGGC	1 cut(s)	516
KspI	CCGCGG	1 cut(s)	1624
Kzo9I	GATC	8 cut(s)	222, 299, 477, 1051, 1345, 1460, 1659, 2029
LmnI	GCTCC	9 cut(s)	46, 1000, 1153, 1472, 1555, 1801, 1864, 2312, 2359
LweI	GCATC	6 cut(s)	276, 331, 510, 1671, 2002, 2311
MaeI	CTAG	9 cut(s)	372, 620, 690, 983, 1004, 1457, 1716, 2262, 2376
MaeIII	GTNAC	4 cut(s)	773, 932, 1199, 1993
MalI	GATC	8 cut(s)	224, 301, 479, 1053, 1347, 1462, 1661, 2031
MboI	GATC	8 cut(s)	222, 299, 477, 1051, 1345, 1460, 1659, 2029
MfeI	CAATTG	4 cut(s)	732, 1098, 1485, 1833
MflI	RGATCY	4 cut(s)	1051, 1345, 1659, 2029
MhlI	GDGCHC	1 cut(s)	2317
MlsI	TGGCCA	2 cut(s)	1254, 2137
MluNI	TGGCCA	2 cut(s)	1254, 2137
MlyI	GAGTC	2 cut(s)	688, 1510
Mox20I	TGGCCA	2 cut(s)	1254, 2137
MroI	TCCGGA	1 cut(s)	588
MroNI	GCCGGC	1 cut(s)	514
MscI	TGGCCA	2 cut(s)	1254, 2137
MseI	TTAA	4 cut(s)	180, 803, 852, 1911
MslI	CAYNNNNRTG	1 cut(s)	1410
Msp20I	TGGCCA	2 cut(s)	1254, 2137
MspA1I	CMGCKG	1 cut(s)	1623
MspI	CCGG	7 cut(s)	8, 53, 74, 252, 515, 589, 1708
MspR9I	CCNGG	5 cut(s)	253, 314, 1543, 1769, 2243
MunI	CAATTG	4 cut(s)	732, 1098, 1485, 1833
Mva1269I	GAATGC	2 cut(s)	270, 719
MvaI	CCWGG	4 cut(s)	314, 1543, 1769, 2243
MvnI	CGCG	1 cut(s)	1623
MwoI	GCNNNNNNNGC	9 cut(s)	46, 620, 629, 679, 1481, 1844, 1915, 2321, 2330
NaeI	GCCGGC	1 cut(s)	516
NciI	CCSGG	1 cut(s)	253
NdeI	CATATG	2 cut(s)	640, 2399
NdeII	GATC	8 cut(s)	222, 299, 477, 1051, 1345, 1460, 1659, 2029
NgoMIV	GCCGGC	1 cut(s)	514
NheI	GCTAGC	1 cut(s)	1003
NlaIII	CATG	8 cut(s)	310, 459, 1375, 1574, 1857, 2023, 2074, 2165
NlaIV	GGNNCC	4 cut(s)	250, 587, 1551, 2214
NmeAIII	GCCGAG	1 cut(s)	160
NmuCI	GTSAC	3 cut(s)	932, 1199, 1993
NspI	RCATGY	2 cut(s)	1857, 2165
PagI	TCATGA	1 cut(s)	1371
PciI	ACATGT	1 cut(s)	2161
PctI	GAATGC	2 cut(s)	270, 719
PdiI	GCCGGC	1 cut(s)	516
PfeI	GAWTC	4 cut(s)	4, 16, 1537, 1810
PleI	GAGTC	2 cut(s)	688, 1510
PpsI	GAGTC	2 cut(s)	688, 1510
PpuMI	RGGWCCY	1 cut(s)	2213
PscI	ACATGT	1 cut(s)	2161
PsiI	TTATAA	1 cut(s)	2168
Psp124BI	GAGCTC	1 cut(s)	2317
Psp5II	RGGWCCY	1 cut(s)	2213
Psp6I	CCWGG	4 cut(s)	312, 1541, 1767, 2241
PspGI	CCWGG	4 cut(s)	312, 1541, 1767, 2241
PspN4I	GGNNCC	4 cut(s)	250, 587, 1551, 2214
PspPI	GGNCC	7 cut(s)	64, 254, 310, 512, 586, 1754, 2213
PspPPI	RGGWCCY	1 cut(s)	2213
PstI	CTGCAG	2 cut(s)	1345, 2053
PstNI	CAGNNNCTG	2 cut(s)	2057, 2248
PsuI	RGATCY	4 cut(s)	1051, 1345, 1659, 2029
RsaI	GTAC	7 cut(s)	688, 1424, 1445, 1736, 1895, 1958, 2282
RsaNI	GTAC	7 cut(s)	687, 1423, 1444, 1735, 1894, 1957, 2281
RseI	CAYNNNNRTG	1 cut(s)	1410
SacI	GAGCTC	1 cut(s)	2317
SacII	CCGCGG	1 cut(s)	1624
SaqAI	TTAA	4 cut(s)	180, 803, 852, 1911
Sau3AI	GATC	8 cut(s)	222, 299, 477, 1051, 1345, 1460, 1659, 2029
Sau96I	GGNCC	7 cut(s)	64, 254, 310, 512, 586, 1754, 2213
ScaI	AGTACT	1 cut(s)	1895
SchI	GAGTC	2 cut(s)	688, 1510
ScrFI	CCNGG	5 cut(s)	253, 314, 1543, 1769, 2243
SduI	GDGCHC	1 cut(s)	2317
SfaNI	GCATC	6 cut(s)	276, 331, 510, 1671, 2002, 2311
SfcI	CTRYAG	5 cut(s)	399, 973, 1341, 1827, 2049
Sfr303I	CCGCGG	1 cut(s)	1624
SgrBI	CCGCGG	1 cut(s)	1624
SinI	GGWCC	3 cut(s)	310, 586, 2213
SmiMI	CAYNNNNRTG	1 cut(s)	1410
SmlI	CTYRAG	5 cut(s)	173, 1676, 1790, 2006, 2316
SmoI	CTYRAG	5 cut(s)	173, 1676, 1790, 2006, 2316
SpeI	ACTAGT	1 cut(s)	982
SsiI	CCGC	8 cut(s)	70, 194, 268, 717, 1235, 1621, 1623, 1918
SspMI	CTAG	9 cut(s)	372, 620, 690, 983, 1004, 1457, 1716, 2262, 2376
SstI	GAGCTC	1 cut(s)	2317
StyD4I	CCNGG	5 cut(s)	251, 312, 1541, 1767, 2241
TaqI	TCGA	1 cut(s)	808
TatI	WGTACW	2 cut(s)	1893, 1956
TauI	GCSGC	3 cut(s)	73, 196, 719
TfiI	GAWTC	4 cut(s)	4, 16, 1537, 1810
Tru1I	TTAA	4 cut(s)	180, 803, 852, 1911
Tru9I	TTAA	4 cut(s)	180, 803, 852, 1911
TscAI	CASTG	9 cut(s)	232, 388, 478, 574, 937, 1072, 1204, 1998, 2307
TseFI	GTSAC	3 cut(s)	932, 1199, 1993
Tsp45I	GTSAC	3 cut(s)	932, 1199, 1993
TspRI	CASTG	9 cut(s)	232, 388, 478, 574, 937, 1072, 1204, 1998, 2307
VpaK11BI	GGWCC	3 cut(s)	310, 586, 2213
XapI	RAATTY	3 cut(s)	812, 1117, 1243
XceI	RCATGY	2 cut(s)	1857, 2165
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1647
XspI	CTAG	9 cut(s)	372, 620, 690, 983, 1004, 1457, 1716, 2262, 2376
ZrmI	AGTACT	1 cut(s)	1895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.