Splicing factor 3B subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G64270 |
| fragaria_vesca | FvH4_2g14010 FvH4_3g24440 |
| malus_domestica | MD17G1162000.v1.1 MD17G1162100.v1.1 |
| prunus_persica | Prupe.8G065000_v2.0.a1 Prupe.8G065000_v2.0.a1 |
| pyrus_communis | pycom17g15510 pycom17g15520 |
| rosa_chinensis | RchiOBHm_Chr5g0043941 RchiOBHm_Chr6g0275901 |
| rosa_laevigata | RLG00000013424 RLG00000034225 |
| rosa_multiflora | Rmu_co8466095.1_g000001 Rmu_sc0002030.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00037140 Rroxscaffold_7G00192780 |
| rosa_rugosa | Rorug05G0209100 Rorug06G0097100 Rorug06G0097200 |
| rosa_samantha | Rh5BG301400 Rh5CG329000 Rh5DG310600 Rh6AG208900 Rh6BG213000 Rh6CG215600 Rh6DG205300 |
| rosa_wichuraiana | Rw0G017250 Rw5G027190 Rw6G018210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 807, 2807 |
| AatII | GACGTC | 1 cut(s) | 113 |
| AccB1I | GGYRCC | 1 cut(s) | 701 |
| AccI | GTMKAC | 1 cut(s) | 3011 |
| AccII | CGCG | 3 cut(s) | 125, 892, 2262 |
| AccIII | TCCGGA | 1 cut(s) | 1227 |
| AclWI | GGATC | 5 cut(s) | 1124, 1589, 1698, 2107, 2306 |
| AcoI | YGGCCR | 4 cut(s) | 957, 1891, 2245, 2774 |
| AcsI | RAATTY | 2 cut(s) | 376, 1882 |
| AcuI | CTGAAG | 3 cut(s) | 1552, 2109, 2219 |
| AcyI | GRCGYC | 4 cut(s) | 110, 128, 263, 341 |
| AdeI | CACNNNGTG | 1 cut(s) | 302 |
| AfaI | GTAC | 8 cut(s) | 1327, 1873, 1910, 2084, 2375, 2534, 2597, 2921 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 45, 317, 344, 439, 440, 468, 1345, 2832, 2986 |
| AflIII | ACRYGT | 2 cut(s) | 2492, 2800 |
| AhlI | ACTAGT | 1 cut(s) | 1621 |
| AjnI | CCWGG | 6 cut(s) | 29, 298, 762, 2180, 2406, 2880 |
| Alw21I | GWGCWC | 2 cut(s) | 2500, 2956 |
| Alw26I | GTCTC | 6 cut(s) | 158, 1208, 1464, 1727, 2783, 2882 |
| AlwI | GGATC | 5 cut(s) | 1124, 1589, 1698, 2107, 2306 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2696, 2887 |
| Ama87I | CYCGRG | 1 cut(s) | 1559 |
| Aor13HI | TCCGGA | 1 cut(s) | 1227 |
| ApoI | RAATTY | 2 cut(s) | 376, 1882 |
| AspLEI | GCGC | 2 cut(s) | 892, 1944 |
| AsuC2I | CCSGG | 3 cut(s) | 345, 464, 706 |
| AsuHPI | GGTGA | 6 cut(s) | 89, 607, 1328, 1510, 1912, 2615 |
| AsuNHI | GCTAGC | 1 cut(s) | 1642 |
| AvaI | CYCGRG | 1 cut(s) | 1559 |
| AvaII | GGWCC | 7 cut(s) | 4, 256, 430, 459, 760, 1225, 2852 |
| AxyI | CCTNAGG | 1 cut(s) | 546 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1863, 1896 |
| BalI | TGGCCA | 3 cut(s) | 959, 1893, 2776 |
| BanI | GGYRCC | 1 cut(s) | 701 |
| BanII | GRGCYC | 1 cut(s) | 2956 |
| Bbv12I | GWGCWC | 2 cut(s) | 2500, 2956 |
| BbvCI | CCTCAGC | 1 cut(s) | 1263 |
| BccI | CCATC | 9 cut(s) | 368, 554, 1093, 1426, 1585, 1799, 2032, 2653, 2901 |
| BceAI | ACGGC | 3 cut(s) | 655, 694, 1045 |
| BciT130I | CCWGG | 6 cut(s) | 31, 300, 764, 2182, 2408, 2882 |
| BciVI | GTATCC | 1 cut(s) | 2354 |
| BclI | TGATCA | 1 cut(s) | 874 |
| BcnI | CCSGG | 3 cut(s) | 345, 464, 706 |
| BcoDI | GTCTC | 6 cut(s) | 158, 1208, 1464, 1727, 2783, 2882 |
| BcuI | ACTAGT | 1 cut(s) | 1621 |
| BfaI | CTAG | 9 cut(s) | 176, 1011, 1259, 1329, 1622, 1643, 2096, 2901, 3015 |
| BfmI | CTRYAG | 6 cut(s) | 1038, 1612, 1714, 1980, 2466, 2688 |
| BfoI | RGCGCY | 1 cut(s) | 1945 |
| BfuI | GTATCC | 1 cut(s) | 2354 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1318 |
| BglII | AGATCT | 2 cut(s) | 1984, 2668 |
| Bme1390I | CCNGG | 9 cut(s) | 31, 300, 345, 464, 706, 764, 2182, 2408, 2882 |
| Bme18I | GGWCC | 7 cut(s) | 4, 256, 430, 459, 760, 1225, 2852 |
| BmeT110I | CYCGRG | 1 cut(s) | 1559 |
| BmiI | GGNNCC | 8 cut(s) | 6, 257, 432, 461, 703, 1226, 2190, 2853 |
| BmrFI | CCNGG | 9 cut(s) | 31, 300, 345, 464, 706, 764, 2182, 2408, 2882 |
| BmtI | GCTAGC | 1 cut(s) | 1646 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 899, 931 |
| BpmI | CTGGAG | 2 cut(s) | 2864, 3008 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1263 |
| BpuEI | CTTGAG | 5 cut(s) | 611, 2336, 2414, 2666, 2940 |
| BpuMI | CCSGG | 3 cut(s) | 345, 464, 706 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1139, 1215, 2297 |
| BsaHI | GRCGYC | 4 cut(s) | 110, 128, 263, 341 |
| BsaI | GGTCTC | 1 cut(s) | 1208 |
| BsaJI | CCNNGG | 8 cut(s) | 267, 462, 488, 588, 1339, 2180, 2260, 2881 |
| BsaWI | WCCGGW | 2 cut(s) | 511, 1227 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 220, 250, 2482, 2512 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 45, 317, 344, 439, 440, 468, 1345, 2832, 2986 |
| Bse118I | RCCGGY | 1 cut(s) | 1153 |
| Bse1I | ACTGG | 3 cut(s) | 1185, 1836, 2927 |
| Bse21I | CCTNAGG | 1 cut(s) | 546 |
| Bse3DI | GCAATG | 2 cut(s) | 2250, 2376 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1139, 1215, 2297 |
| BseAI | TCCGGA | 1 cut(s) | 1227 |
| BseBI | CCWGG | 6 cut(s) | 31, 300, 764, 2182, 2408, 2882 |
| BseDI | CCNNGG | 8 cut(s) | 267, 462, 488, 588, 1339, 2180, 2260, 2881 |
| BseJI | GATNNNNATC | 3 cut(s) | 1139, 1215, 2297 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 45, 317, 344, 439, 440, 468, 1345, 2832, 2986 |
| BseMI | GCAATG | 2 cut(s) | 2250, 2376 |
| BseMII | CTCAG | 4 cut(s) | 672, 1219, 1254, 2259 |
| BseNI | ACTGG | 3 cut(s) | 1185, 1836, 2927 |
| BseRI | GAGGAG | 7 cut(s) | 386, 590, 605, 1805, 2148, 2756, 3011 |
| BseYI | CCCAGC | 1 cut(s) | 323 |
| BsgI | GTGCAG | 3 cut(s) | 1035, 1224, 2456 |
| Bsh1236I | CGCG | 3 cut(s) | 125, 892, 2262 |
| BshNI | GGYRCC | 1 cut(s) | 701 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2500, 2956 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1559 |
| BslFI | GGGAC | 3 cut(s) | 134, 173, 269 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 45, 317, 344, 439, 440, 468, 1345, 2832, 2986 |
| BsmAI | GTCTC | 6 cut(s) | 158, 1208, 1464, 1727, 2783, 2882 |
| BsmFI | GGGAC | 3 cut(s) | 134, 173, 269 |
| BsmI | GAATGC | 1 cut(s) | 723 |
| Bso31I | GGTCTC | 1 cut(s) | 1208 |
| BsoBI | CYCGRG | 1 cut(s) | 1559 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2500, 2956 |
| Bsp13I | TCCGGA | 1 cut(s) | 1227 |
| Bsp143I | GATC | 9 cut(s) | 82, 874, 1116, 1581, 1690, 1984, 2099, 2298, 2668 |
| BspCNI | CTCAG | 4 cut(s) | 673, 1218, 1255, 2260 |
| BspEI | TCCGGA | 1 cut(s) | 1227 |
| BspFNI | CGCG | 3 cut(s) | 125, 892, 2262 |
| BspHI | TCATGA | 2 cut(s) | 1777, 2010 |
| BspLI | GGNNCC | 8 cut(s) | 6, 257, 432, 461, 703, 1226, 2190, 2853 |
| BspMAI | CTGCAG | 2 cut(s) | 1984, 2692 |
| BspOI | GCTAGC | 1 cut(s) | 1646 |
| BspPI | GGATC | 5 cut(s) | 1124, 1589, 1698, 2107, 2306 |
| BspT107I | GGYRCC | 1 cut(s) | 701 |
| BspTNI | GGTCTC | 1 cut(s) | 1208 |
| BsrDI | GCAATG | 2 cut(s) | 2250, 2376 |
| BsrFI | RCCGGY | 1 cut(s) | 1153 |
| BsrI | ACTGG | 3 cut(s) | 1185, 1836, 2927 |
| BssAI | RCCGGY | 1 cut(s) | 1153 |
| BssECI | CCNNGG | 8 cut(s) | 267, 462, 488, 588, 1339, 2180, 2260, 2881 |
| BssMI | GATC | 9 cut(s) | 82, 874, 1116, 1581, 1690, 1984, 2099, 2298, 2668 |
| BssNAI | GTATAC | 1 cut(s) | 3012 |
| BssNI | GRCGYC | 4 cut(s) | 110, 128, 263, 341 |
| BssT1I | CCWWGG | 1 cut(s) | 267 |
| Bst1107I | GTATAC | 1 cut(s) | 3012 |
| Bst2UI | CCWGG | 6 cut(s) | 31, 300, 764, 2182, 2408, 2882 |
| Bst6I | CTCTTC | 3 cut(s) | 38, 561, 2073 |
| BstACI | GRCGYC | 4 cut(s) | 110, 128, 263, 341 |
| BstC8I | GCNNGC | 6 cut(s) | 644, 1155, 1644, 1977, 2352, 2517 |
| BstDEI | CTNAG | 6 cut(s) | 546, 681, 1205, 1263, 1859, 2268 |
| BstDSI | CCRYGG | 2 cut(s) | 1339, 2260 |
| BstFNI | CGCG | 3 cut(s) | 125, 892, 2262 |
| BstH2I | RGCGCY | 1 cut(s) | 1945 |
| BstHHI | GCGC | 2 cut(s) | 892, 1944 |
| BstKTI | GATC | 9 cut(s) | 85, 877, 1119, 1584, 1693, 1987, 2102, 2301, 2671 |
| BstMAI | GTCTC | 6 cut(s) | 158, 1208, 1464, 1727, 2783, 2882 |
| BstMBI | GATC | 9 cut(s) | 82, 874, 1116, 1581, 1690, 1984, 2099, 2298, 2668 |
| BstNI | CCWGG | 6 cut(s) | 31, 300, 764, 2182, 2408, 2882 |
| BstNSI | RCATGY | 2 cut(s) | 2496, 2804 |
| BstSCI | CCNGG | 9 cut(s) | 29, 298, 343, 462, 704, 762, 2180, 2406, 2880 |
| BstSFI | CTRYAG | 6 cut(s) | 1038, 1612, 1714, 1980, 2466, 2688 |
| BstUI | CGCG | 3 cut(s) | 125, 892, 2262 |
| BstX2I | RGATCY | 4 cut(s) | 1690, 1984, 2298, 2668 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 274, 1925 |
| BstYI | RGATCY | 4 cut(s) | 1690, 1984, 2298, 2668 |
| BstZ17I | GTATAC | 1 cut(s) | 3012 |
| Bsu36I | CCTNAGG | 1 cut(s) | 546 |
| BsuI | GTATCC | 1 cut(s) | 2354 |
| BtgI | CCRYGG | 2 cut(s) | 1339, 2260 |
| BtgZI | GCGATG | 1 cut(s) | 399 |
| BtsI | GCAGTG | 1 cut(s) | 2637 |
| BtsIMutI | CAGTG | 6 cut(s) | 1027, 1178, 1213, 1711, 1843, 2637 |
| Cac8I | GCNNGC | 6 cut(s) | 644, 1155, 1644, 1977, 2352, 2517 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2696, 2887 |
| CciI | TCATGA | 2 cut(s) | 1777, 2010 |
| CfoI | GCGC | 2 cut(s) | 892, 1944 |
| Cfr10I | RCCGGY | 1 cut(s) | 1153 |
| Cfr42I | CCGCGG | 1 cut(s) | 2263 |
| CseI | GACGC | 5 cut(s) | 131, 136, 271, 349, 2432 |
| CsiI | ACCWGGT | 1 cut(s) | 298 |
| Csp6I | GTAC | 8 cut(s) | 1326, 1872, 1909, 2083, 2374, 2533, 2596, 2920 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1635, 1670 |
| CviQI | GTAC | 8 cut(s) | 1326, 1872, 1909, 2083, 2374, 2533, 2596, 2920 |
| DdeI | CTNAG | 6 cut(s) | 546, 681, 1205, 1263, 1859, 2268 |
| DpnI | GATC | 9 cut(s) | 84, 876, 1118, 1583, 1692, 1986, 2101, 2300, 2670 |
| DpnII | GATC | 9 cut(s) | 82, 874, 1116, 1581, 1690, 1984, 2099, 2298, 2668 |
| DraIII | CACNNNGTG | 1 cut(s) | 302 |
| EaeI | YGGCCR | 4 cut(s) | 957, 1891, 2245, 2774 |
| Eam1104I | CTCTTC | 3 cut(s) | 38, 561, 2073 |
| EarI | CTCTTC | 3 cut(s) | 38, 561, 2073 |
| EciI | GGCGGA | 1 cut(s) | 333 |
| Ecl136II | GAGCTC | 1 cut(s) | 2954 |
| Eco130I | CCWWGG | 1 cut(s) | 267 |
| Eco24I | GRGCYC | 1 cut(s) | 2956 |
| Eco31I | GGTCTC | 1 cut(s) | 1208 |
| Eco47I | GGWCC | 7 cut(s) | 4, 256, 430, 459, 760, 1225, 2852 |
| Eco53kI | GAGCTC | 1 cut(s) | 2954 |
| Eco57I | CTGAAG | 3 cut(s) | 1552, 2109, 2219 |
| Eco81I | CCTNAGG | 1 cut(s) | 546 |
| Eco88I | CYCGRG | 1 cut(s) | 1559 |
| EcoICRI | GAGCTC | 1 cut(s) | 2954 |
| EcoO109I | RGGNCCY | 2 cut(s) | 459, 2852 |
| EcoRI | GAATTC | 1 cut(s) | 1882 |
| EcoRII | CCWGG | 6 cut(s) | 29, 298, 762, 2180, 2406, 2880 |
| EcoT14I | CCWWGG | 1 cut(s) | 267 |
| EcoT38I | GRGCYC | 1 cut(s) | 2956 |
| ErhI | CCWWGG | 1 cut(s) | 267 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1579, 1611, 1928, 1960, 2949, 2981 |
| FaqI | GGGAC | 3 cut(s) | 134, 173, 269 |
| FauI | CCCGC | 1 cut(s) | 433 |
| FauNDI | CATATG | 2 cut(s) | 1279, 3038 |
| FbaI | TGATCA | 1 cut(s) | 874 |
| FblI | GTMKAC | 1 cut(s) | 3011 |
| FriOI | GRGCYC | 1 cut(s) | 2956 |
| FspBI | CTAG | 9 cut(s) | 176, 1011, 1259, 1329, 1622, 1643, 2096, 2901, 3015 |
| GlaI | GCGC | 2 cut(s) | 891, 1943 |
| GsaI | CCCAGC | 1 cut(s) | 327 |
| GsuI | CTGGAG | 2 cut(s) | 2864, 3008 |
| HaeII | RGCGCY | 1 cut(s) | 1945 |
| HgaI | GACGC | 5 cut(s) | 131, 136, 271, 349, 2432 |
| HhaI | GCGC | 2 cut(s) | 892, 1944 |
| Hin1I | GRCGYC | 4 cut(s) | 110, 128, 263, 341 |
| Hin6I | GCGC | 2 cut(s) | 890, 1942 |
| HinP1I | GCGC | 2 cut(s) | 890, 1942 |
| HindIII | AAGCTT | 4 cut(s) | 473, 617, 920, 1291 |
| HphI | GGTGA | 6 cut(s) | 89, 607, 1328, 1510, 1912, 2615 |
| Hpy166II | GTNNAC | 6 cut(s) | 527, 1709, 2362, 2677, 2755, 3012 |
| Hpy8I | GTNNAC | 6 cut(s) | 527, 1709, 2362, 2677, 2755, 3012 |
| Hpy99I | CGWCG | 4 cut(s) | 112, 115, 130, 343 |
| HpyCH4IV | ACGT | 1 cut(s) | 110 |
| HpyF3I | CTNAG | 6 cut(s) | 546, 681, 1205, 1263, 1859, 2268 |
| HpySE526I | ACGT | 1 cut(s) | 110 |
| Hsp92I | GRCGYC | 4 cut(s) | 110, 128, 263, 341 |
| HspAI | GCGC | 2 cut(s) | 890, 1942 |
| Kpn2I | TCCGGA | 1 cut(s) | 1227 |
| KroI | GCCGGC | 1 cut(s) | 1153 |
| KroNI | GCCGGC | 1 cut(s) | 1155 |
| Ksp22I | TGATCA | 1 cut(s) | 874 |
| KspI | CCGCGG | 1 cut(s) | 2263 |
| Kzo9I | GATC | 9 cut(s) | 82, 874, 1116, 1581, 1690, 1984, 2099, 2298, 2668 |
| MabI | ACCWGGT | 1 cut(s) | 298 |
| MaeI | CTAG | 9 cut(s) | 176, 1011, 1259, 1329, 1622, 1643, 2096, 2901, 3015 |
| MaeII | ACGT | 1 cut(s) | 110 |
| MaeIII | GTNAC | 5 cut(s) | 304, 1176, 1412, 1571, 2632 |
| MalI | GATC | 9 cut(s) | 84, 876, 1118, 1583, 1692, 1986, 2101, 2300, 2670 |
| MboI | GATC | 9 cut(s) | 82, 874, 1116, 1581, 1690, 1984, 2099, 2298, 2668 |
| MfeI | CAATTG | 5 cut(s) | 392, 1371, 1737, 2124, 2472 |
| MflI | RGATCY | 4 cut(s) | 1690, 1984, 2298, 2668 |
| MhlI | GDGCHC | 2 cut(s) | 2500, 2956 |
| MlsI | TGGCCA | 3 cut(s) | 959, 1893, 2776 |
| MluNI | TGGCCA | 3 cut(s) | 959, 1893, 2776 |
| MlyI | GAGTC | 4 cut(s) | 229, 487, 1327, 2149 |
| MmeI | TCCRAC | 3 cut(s) | 93, 233, 1767 |
| Mox20I | TGGCCA | 3 cut(s) | 959, 1893, 2776 |
| MroI | TCCGGA | 1 cut(s) | 1227 |
| MroNI | GCCGGC | 1 cut(s) | 1153 |
| MscI | TGGCCA | 3 cut(s) | 959, 1893, 2776 |
| MseI | TTAA | 4 cut(s) | 633, 1442, 1491, 2550 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2049 |
| Msp20I | TGGCCA | 3 cut(s) | 959, 1893, 2776 |
| MspA1I | CMGCKG | 2 cut(s) | 935, 2262 |
| MspR9I | CCNGG | 9 cut(s) | 31, 300, 345, 464, 706, 764, 2182, 2408, 2882 |
| MunI | CAATTG | 5 cut(s) | 392, 1371, 1737, 2124, 2472 |
| Mva1269I | GAATGC | 1 cut(s) | 723 |
| MvaI | CCWGG | 6 cut(s) | 31, 300, 764, 2182, 2408, 2882 |
| MvnI | CGCG | 3 cut(s) | 125, 892, 2262 |
| NaeI | GCCGGC | 1 cut(s) | 1155 |
| NciI | CCSGG | 3 cut(s) | 345, 464, 706 |
| NdeI | CATATG | 2 cut(s) | 1279, 3038 |
| NdeII | GATC | 9 cut(s) | 82, 874, 1116, 1581, 1690, 1984, 2099, 2298, 2668 |
| NgoMIV | GCCGGC | 1 cut(s) | 1153 |
| NheI | GCTAGC | 1 cut(s) | 1642 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 257, 432, 461, 703, 1226, 2190, 2853 |
| NmeAIII | GCCGAG | 2 cut(s) | 513, 613 |
| NmuCI | GTSAC | 3 cut(s) | 304, 1176, 2632 |
| NspI | RCATGY | 2 cut(s) | 2496, 2804 |
| PagI | TCATGA | 2 cut(s) | 1777, 2010 |
| PciI | ACATGT | 2 cut(s) | 2492, 2800 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 21, 236 |
| PctI | GAATGC | 1 cut(s) | 723 |
| PdiI | GCCGGC | 1 cut(s) | 1155 |
| PfeI | GAWTC | 9 cut(s) | 65, 151, 194, 406, 508, 520, 844, 2176, 2449 |
| PleI | GAGTC | 4 cut(s) | 229, 487, 1327, 2149 |
| PpsI | GAGTC | 4 cut(s) | 229, 487, 1327, 2149 |
| PpuMI | RGGWCCY | 2 cut(s) | 459, 2852 |
| PscI | ACATGT | 2 cut(s) | 2492, 2800 |
| PsiI | TTATAA | 2 cut(s) | 807, 2807 |
| Psp124BI | GAGCTC | 1 cut(s) | 2956 |
| Psp5II | RGGWCCY | 2 cut(s) | 459, 2852 |
| Psp6I | CCWGG | 6 cut(s) | 29, 298, 762, 2180, 2406, 2880 |
| PspFI | CCCAGC | 1 cut(s) | 323 |
| PspGI | CCWGG | 6 cut(s) | 29, 298, 762, 2180, 2406, 2880 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 257, 432, 461, 703, 1226, 2190, 2853 |
| PspPPI | RGGWCCY | 2 cut(s) | 459, 2852 |
| PstI | CTGCAG | 2 cut(s) | 1984, 2692 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2696, 2887 |
| PsuI | RGATCY | 4 cut(s) | 1690, 1984, 2298, 2668 |
| PvuII | CAGCTG | 1 cut(s) | 935 |
| RsaI | GTAC | 8 cut(s) | 1327, 1873, 1910, 2084, 2375, 2534, 2597, 2921 |
| RsaNI | GTAC | 8 cut(s) | 1326, 1872, 1909, 2083, 2374, 2533, 2596, 2920 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2049 |
| SacI | GAGCTC | 1 cut(s) | 2956 |
| SacII | CCGCGG | 1 cut(s) | 2263 |
| SaqAI | TTAA | 4 cut(s) | 633, 1442, 1491, 2550 |
| Sau3AI | GATC | 9 cut(s) | 82, 874, 1116, 1581, 1690, 1984, 2099, 2298, 2668 |
| SchI | GAGTC | 4 cut(s) | 229, 487, 1327, 2149 |
| ScrFI | CCNGG | 9 cut(s) | 31, 300, 345, 464, 706, 764, 2182, 2408, 2882 |
| SduI | GDGCHC | 2 cut(s) | 2500, 2956 |
| SexAI | ACCWGGT | 1 cut(s) | 298 |
| SfcI | CTRYAG | 6 cut(s) | 1038, 1612, 1714, 1980, 2466, 2688 |
| Sfr303I | CCGCGG | 1 cut(s) | 2263 |
| SgrBI | CCGCGG | 1 cut(s) | 2263 |
| SinI | GGWCC | 7 cut(s) | 4, 256, 430, 459, 760, 1225, 2852 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2049 |
| SmlI | CTYRAG | 5 cut(s) | 626, 2315, 2429, 2645, 2955 |
| SmoI | CTYRAG | 5 cut(s) | 626, 2315, 2429, 2645, 2955 |
| SpeI | ACTAGT | 1 cut(s) | 1621 |
| SspMI | CTAG | 9 cut(s) | 176, 1011, 1259, 1329, 1622, 1643, 2096, 2901, 3015 |
| SstI | GAGCTC | 1 cut(s) | 2956 |
| StyD4I | CCNGG | 9 cut(s) | 29, 298, 343, 462, 704, 762, 2180, 2406, 2880 |
| StyI | CCWWGG | 1 cut(s) | 267 |
| TaiI | ACGT | 1 cut(s) | 113 |
| TaqI | TCGA | 2 cut(s) | 480, 1447 |
| TatI | WGTACW | 1 cut(s) | 2595 |
| TauI | GCSGC | 4 cut(s) | 281, 287, 649, 2250 |
| TfiI | GAWTC | 9 cut(s) | 65, 151, 194, 406, 508, 520, 844, 2176, 2449 |
| Tru1I | TTAA | 4 cut(s) | 633, 1442, 1491, 2550 |
| Tru9I | TTAA | 4 cut(s) | 633, 1442, 1491, 2550 |
| TscAI | CASTG | 6 cut(s) | 1027, 1185, 1213, 1711, 1843, 2637 |
| TseFI | GTSAC | 3 cut(s) | 304, 1176, 2632 |
| Tsp45I | GTSAC | 3 cut(s) | 304, 1176, 2632 |
| TspGWI | ACGGA | 1 cut(s) | 399 |
| TspRI | CASTG | 6 cut(s) | 1027, 1185, 1213, 1711, 1843, 2637 |
| VpaK11BI | GGWCC | 7 cut(s) | 4, 256, 430, 459, 760, 1225, 2852 |
| XapI | RAATTY | 2 cut(s) | 376, 1882 |
| XceI | RCATGY | 2 cut(s) | 2496, 2804 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2286 |
| XmiI | GTMKAC | 1 cut(s) | 3011 |
| XspI | CTAG | 9 cut(s) | 176, 1011, 1259, 1329, 1622, 1643, 2096, 2901, 3015 |
| ZraI | GACGTC | 1 cut(s) | 111 |