Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0011760

Physical Location & Seq

Genomic Coordinates Reverse (-)

246843 .. 252147

Gene Structure 5305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g00460.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

ATGGCAGCTCTCACTCTCACTCTCTTCATCTTCCTCCTCCGCTTCACCACCGCCACTAGCCACCGCCACCTCCTCCACCAGCCCTTCTTCCCAGTCGAATCAGACCCTCCAACTCCATCACCATCTTCCTCTCCCCACCCCTCTCCAATTCCCAAAATGCCCTTCTCCTCCGCCTCATCCTCCTCCCCAACGCCGCCGGATAACAAGCCCTTCTTCCCCTCCATGAAACCCACACCGCCTCCTCCCTCCCCAACAGCCCTCACCTCCTTCCCGGCCAACATTTCCTCCATCCTCTTCCCCCAACCCTCCTCCACCTCCCCCCACCGCCACGTCATCGCCATCGCCGCCTCCGTCTCCATCACCGCCGTCCTCATCATCGTCTCCGCCGCCGCATTTCTCCTCTACCGCCGCCGCCAGAAGCTCGACCCCACTTCCGGCGACGACAAGGCCTCCCGGACCGACAGCCTCCGCCTGTTCCCGCCAAACACCGTCACCTCCGACGGCGTTCACAAGCAGCGTACCACACCCAACAGAACCACCGAGAACTTCCTCTACCTCGGCACATTATCCAACGCTCACGCTACCGACGCCCAAAGCGTCGCCACCACCAGCAATGCCAGCTCCAAGTTCGGCGTTTCTTCTAGCCGCTCCGGCTCGCCGTACCAGAAGCTTGGCTCGCCGGAGCTGACGCCGCTTCCGCCGCTTCCCAAGCACAACTTCCGGCGGAGCTACAAGCACGAACTGGGTTCCGACGACGATGAAGAGGAAGATGAGTTCTTTTCTCCGAGAGGGTCGTCTGCGAGTCCCAAAAAGGTCGCCGGAGTAAGCTCAGATAGAGTGTTCAAGGCGGTAGAAGGCGAGAACATCGGAAGCAGAAGCTTCAATTCAAGAACTGCATCATACCCATGTTCGAAATCTGCTTCTCCAGCAAGTTCTGTGTCCAACACTGTCTCGCCGCAGCTGAATATATCAAGTCCCACAAACTCGCCGGACTCTGTGATCAATTTCATGGCTCCGTCACGGCCTGGTACGGTTCCGGTGGCTGTGTCCCGGTCGATGTCTTCCTCGTCAACGTTTTCTGAGAGAGTTGTTCCCGCGAATGTGCAGAGTTCCCCTGACTTTTTGACACAGATGAAGCAGTCTCTGTTGAGAAATAACAGTGCTCCTAAGCGGTTTGTTCCGATAAGACTGCCTCCGCCGCCTCCTCCGCCACCGCCGCCGAGGTTTTGGGAAGGTCCGGTGAGTCCAGTGGTGAATGCAGGTCCACCTGCTCTTGTCACGCCTACCAGGGCGGGTGTGTTTCAGAATATGGGACCAGTTTTGGCTGGTGAACCATCAGAGAAGAATGGCGTTGAGGAAAAAAGCGAGGAAACTCCTAGGCCAAAGTTGAAGCCTTTACATTGGGACAAAGTTAGGGCCAGCTCAGACCGCGCTATGGTCTGGGATCAGTTAAAATCGAGCTCGTTTCAGTTGAATGAGGAAATGATCGAGACACTTTTTGTGGTAAACAATTCAAGTTTGACACCAAAAGAAAATGCTCGGCGACAAATTCTGCCCTCTCTGAATCAGGAGAATCGTGTGCTGGATCCAAAGAAGTCTCAGAATATTGCAATTTTGTTAAGGGCGCTCAATGTTACCATTGATGAAGTCTGTGAAGCACTCTTGGAAGGAAACTCGGATTCTCTCGGAACGGAACTTCTTGAAAGTTTATTAAAGATGGCTCCAACCAAAGAGGAAGAGCGTAAGCTAAAAGAGTTCAAAGATGAATCACCTTTTAAGCTTGGCCCAGCTGAGAAATTTCTGAAGGCAGTGCTTGATGTACCTTATGCATTTAAGAGGGTGGATGCAATGCTGTACATTGCCAATTTTGATTCAGAAGTAGACTATCTTAAAAGGTCTTTTGAGACATTGGAGGCAGCTTGTGAAGAATTGAAGAACAGCAGAATGTTCTATAAGCTTCTCGAAGCAGTGCTCAAAACTGGGAACCGCATGAATGTTGGCACCACCCGTGGCGATGCTCATGCCTTCAAGCTCGACACACTCCTCAAGCTGGTAGATGTGAAGGGCACTGATGGAAAAACTACTCTGTTGCATTTTGTTGTACAGGAGATCATCAGAGCTGAAGGTTCTCGTCTCTCGGGCATGAATCAGAATGAAACAACTGAGAGCAGTCAACAATCTTCTTTCCGGGATGATGTTGAGTTTAGGAAGCTTGGCCTGCAAGTTGTTTCAGGATTGAGTGGGGAGCTCATTAATGTAAAGAAAACTGCTGGTATGGATTCAGATGTACTGAGCAATGAAGTTGCCAAGATTGCTGGTGGAGTTTCAAAAATAGAAGATGTTGTAAAACTAATTGAAGGAAGTGCATTGAAGGAGAGTAGCCAGAAGTTCTTTGACTCCATGAGTGGGTTCTTGAACAAGGCAAGTGAAGAGATTGTGATGATTCAAGCTAGAGAGAAACTTGCATTCTGCATGGTAAAGGAAATAACAGAATATTTCCATGGGAACTCAGCTAAAGAAGAAGCTCATCCTTTACGTATTTTCACGGTGGTGAGAGATTTTCTGTCCATTCTAGATCAGGCATGCAAGGTAGTTGGCAAAGTTAATGAAAGAACCATAGTTGGGTCAGCACGCCAATTTCCTATTGTCATGAATCCAACCCTGCCACCAGTTTTTCCCGGACCAAGTACAAAACAGCATTATGGTTCCTCGGATGATGAAACCTTGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030312 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0030838 GO:0031333 GO:0031334 GO:0032271 GO:0032272 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051016 GO:0051128 GO:0051129 GO:0051130 GO:0051493 GO:0051494 GO:0051495 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

911

Amino Acids

99.46

Weight (kDa)

8.6

Isoelectric Point (pI)

62.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	454 - 858	6.9e-115	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011760)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43800
fragaria_vesca	FvH4_1g00460
malus_domestica	MD02G1003800.v1.1 MD15G1147100.v1.1
prunus_persica	Prupe.7G267500_v2.0.a1
pyrus_communis	pycom02g00230 pycom15g13200
rosa_chinensis	RchiOBHm_Chr2g0084971
rosa_laevigata	RLG00000015652
rosa_multiflora	Rmu_co8206718.1_g000001 Rmu_sc0017508.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155670
rosa_rugosa	Rorug01G0457400
rosa_samantha	Rh2AG005000 Rh2BG006200 Rh2BG300200 Rh2CG006800 Rh2DG006600
rosa_wichuraiana	Rw2G000500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1276
Acc36I	ACCTGC	2 cut(s)	1250, 1276
AccB1I	GGYRCC	1 cut(s)	2000
AccBSI	CCGCTC	1 cut(s)	648
AccI	GTMKAC	1 cut(s)	1881
AccII	CGCG	2 cut(s)	1097, 1431
AclI	AACGTT	1 cut(s)	1073
AclWI	GGATC	3 cut(s)	1452, 1580, 1593
AcoI	YGGCCR	1 cut(s)	273
AcsI	RAATTY	2 cut(s)	1548, 1796
AcuI	CTGAAG	2 cut(s)	1823, 2142
AcyI	GRCGYC	2 cut(s)	588, 689
AfaI	GTAC	8 cut(s)	520, 662, 1030, 1821, 1856, 2103, 2289, 2689
AfiI	CCNNNNNNNGG	5 cut(s)	434, 1435, 2050, 2406, 2622
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	2 cut(s)	1024, 1286
AjuI	GAANNNNNNNTTGG	4 cut(s)	146, 178, 701, 733
AleI	CACNNNNGTG	1 cut(s)	2549
AloI	GAACNNNNNNTCC	2 cut(s)	758, 790
Alw21I	GWGCWC	4 cut(s)	1165, 1463, 1974, 2250
Alw26I	GTCTC	8 cut(s)	358, 385, 955, 1146, 1484, 1602, 1898, 2138
AlwI	GGATC	3 cut(s)	1452, 1580, 1593
AlwNI	CAGNNNCTG	1 cut(s)	1144
Ama87I	CYCGRG	1 cut(s)	2137
AoxI	GGCC	7 cut(s)	273, 447, 1022, 1379, 1416, 1783, 2215
ApeKI	GCWGC	4 cut(s)	5, 514, 958, 1916
ApoI	RAATTY	2 cut(s)	1548, 1796
AseI	ATTAAT	1 cut(s)	2253
AspA2I	CCTAGG	1 cut(s)	1376
AspLEI	GCGC	2 cut(s)	1433, 1627
AspS9I	GGNCC	7 cut(s)	456, 1235, 1262, 1313, 1416, 1784, 2681
AsuC2I	CCSGG	5 cut(s)	272, 454, 1051, 2189, 2679
AsuII	TTCGAA	1 cut(s)	911
AvaI	CYCGRG	1 cut(s)	2137
AvaII	GGWCC	5 cut(s)	456, 1235, 1262, 1313, 2681
AvrII	CCTAGG	1 cut(s)	1376
BaeGI	GKGCMC	1 cut(s)	2069
BamHI	GGATCC	1 cut(s)	1585
BanI	GGYRCC	1 cut(s)	2000
BanII	GRGCYC	2 cut(s)	1463, 2250
BbsI	GAAGAC	1 cut(s)	1053
Bbv12I	GWGCWC	4 cut(s)	1165, 1463, 1974, 2250
BbvI	GCAGC	4 cut(s)	17, 526, 970, 1928
BccI	CCATC	8 cut(s)	124, 130, 296, 347, 365, 1342, 1711, 2066
BceAI	ACGGC	4 cut(s)	350, 517, 643, 1037
BcgI	CGANNNNNNTGC	4 cut(s)	1171, 1205, 2003, 2037
BciT130I	CCWGG	2 cut(s)	1026, 1288
BclI	TGATCA	1 cut(s)	999
BcnI	CCSGG	5 cut(s)	272, 454, 1051, 2189, 2679
BcoDI	GTCTC	8 cut(s)	358, 385, 955, 1146, 1484, 1602, 1898, 2138
BfaI	CTAG	5 cut(s)	57, 642, 1377, 2451, 2573
BfoI	RGCGCY	1 cut(s)	1628
BfuAI	ACCTGC	2 cut(s)	1250, 1276
BglI	GCCNNNNNGGC	1 cut(s)	651
BlnI	CCTAGG	1 cut(s)	1376
Bme1390I	CCNGG	7 cut(s)	272, 454, 1026, 1051, 1288, 2189, 2679
Bme18I	GGWCC	5 cut(s)	456, 1235, 1262, 1313, 2681
BmeT110I	CYCGRG	1 cut(s)	2137
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	7 cut(s)	456, 1235, 1262, 1313, 1416, 1784, 2681
BmiI	GGNNCC	9 cut(s)	748, 1014, 1035, 1314, 1587, 1722, 1985, 2002, 2707
BmrFI	CCNGG	7 cut(s)	272, 454, 1026, 1051, 1288, 2189, 2679
BmrI	ACTGGG	3 cut(s)	86, 752, 1989
BmsI	GCATC	3 cut(s)	905, 1834, 2005
BmuI	ACTGGG	3 cut(s)	86, 752, 1989
BpiI	GAAGAC	1 cut(s)	1053
BpmI	CTGGAG	1 cut(s)	909
Bpu10I	CCTNAGC	1 cut(s)	1167
Bpu14I	TTCGAA	1 cut(s)	911
BpuEI	CTTGAG	1 cut(s)	2030
BpuMI	CCSGG	5 cut(s)	272, 454, 1051, 2189, 2679
BsaAI	YACGTR	1 cut(s)	2537
BsaHI	GRCGYC	2 cut(s)	588, 689
BsaJI	CCNNGG	7 cut(s)	556, 1220, 1287, 1376, 2008, 2500, 2709
BsaWI	WCCGGW	2 cut(s)	1036, 1237
BsaXI	ACNNNNNCTCC	6 cut(s)	223, 253, 269, 299, 434, 464
Bsc4I	CCNNNNNNNGG	5 cut(s)	434, 1435, 2050, 2406, 2622
Bse1I	ACTGG	6 cut(s)	92, 747, 1247, 1316, 1984, 2669
Bse3DI	GCAATG	4 cut(s)	619, 1854, 1857, 2302
BseBI	CCWGG	2 cut(s)	1026, 1288
BseDI	CCNNGG	7 cut(s)	556, 1220, 1287, 1376, 2008, 2500, 2709
BseGI	GGATG	6 cut(s)	176, 288, 1849, 2197, 2527, 2719
BseLI	CCNNNNNNNGG	5 cut(s)	434, 1435, 2050, 2406, 2622
BseMI	GCAATG	4 cut(s)	619, 1854, 1857, 2302
BseMII	CTCAG	8 cut(s)	843, 1071, 1437, 1613, 1782, 2154, 2282, 2523
BseNI	ACTGG	6 cut(s)	92, 747, 1247, 1316, 1984, 2669
BseRI	GAGGAG	9 cut(s)	26, 62, 157, 172, 231, 298, 389, 1194, 2033
BseSI	GKGCMC	1 cut(s)	2069
BseXI	GCAGC	4 cut(s)	17, 526, 970, 1928
BseYI	CCCAGC	1 cut(s)	1786
BsgI	GTGCAG	1 cut(s)	1124
Bsh1236I	CGCG	2 cut(s)	1097, 1431
Bsh1285I	CGRYCG	1 cut(s)	1055
BshFI	GGCC	7 cut(s)	275, 449, 1024, 1381, 1418, 1785, 2217
BshNI	GGYRCC	1 cut(s)	2000
BsiEI	CGRYCG	1 cut(s)	1055
BsiHKAI	GWGCWC	4 cut(s)	1165, 1463, 1974, 2250
BsiHKCI	CYCGRG	1 cut(s)	2137
BslFI	GGGAC	5 cut(s)	789, 960, 1033, 1326, 1418
BslI	CCNNNNNNNGG	5 cut(s)	434, 1435, 2050, 2406, 2622
BsmAI	GTCTC	8 cut(s)	358, 385, 955, 1146, 1484, 1602, 1898, 2138
BsmBI	CGTCTC	3 cut(s)	358, 385, 2138
BsmFI	GGGAC	5 cut(s)	789, 960, 1033, 1326, 1418
BsmI	GAATGC	2 cut(s)	1261, 2465
BsnI	GGCC	7 cut(s)	275, 449, 1024, 1381, 1418, 1785, 2217
BsoBI	CYCGRG	1 cut(s)	2137
Bsp119I	TTCGAA	1 cut(s)	911
Bsp1286I	GDGCHC	5 cut(s)	1165, 1463, 1974, 2069, 2250
Bsp1407I	TGTACA	2 cut(s)	1854, 2101
Bsp143I	GATC	6 cut(s)	999, 1444, 1485, 1585, 2109, 2575
Bsp19I	CCATGG	1 cut(s)	2500
BspANI	GGCC	7 cut(s)	275, 449, 1024, 1381, 1418, 1785, 2217
BspCNI	CTCAG	8 cut(s)	842, 1072, 1436, 1612, 1783, 2155, 2283, 2522
BspFNI	CGCG	2 cut(s)	1097, 1431
BspHI	TCATGA	1 cut(s)	2649
BspLI	GGNNCC	9 cut(s)	748, 1014, 1035, 1314, 1587, 1722, 1985, 2002, 2707
BspMI	ACCTGC	2 cut(s)	1250, 1276
BspPI	GGATC	3 cut(s)	1452, 1580, 1593
BspQI	GCTCTTC	1 cut(s)	1731
BspT104I	TTCGAA	1 cut(s)	911
BspT107I	GGYRCC	1 cut(s)	2000
BsrBI	CCGCTC	1 cut(s)	648
BsrDI	GCAATG	4 cut(s)	619, 1854, 1857, 2302
BsrGI	TGTACA	2 cut(s)	1854, 2101
BsrI	ACTGG	6 cut(s)	92, 747, 1247, 1316, 1984, 2669
BssECI	CCNNGG	7 cut(s)	556, 1220, 1287, 1376, 2008, 2500, 2709
BssMI	GATC	6 cut(s)	999, 1444, 1485, 1585, 2109, 2575
BssNI	GRCGYC	2 cut(s)	588, 689
BssT1I	CCWWGG	2 cut(s)	1376, 2500
Bst2UI	CCWGG	2 cut(s)	1026, 1288
Bst4CI	ACNGT	5 cut(s)	490, 949, 1033, 1160, 2548
Bst6I	CTCTTC	5 cut(s)	29, 299, 756, 1731, 2424
BstACI	GRCGYC	2 cut(s)	588, 689
BstAUI	TGTACA	2 cut(s)	1854, 2101
BstBAI	YACGTR	1 cut(s)	2537
BstBI	TTCGAA	1 cut(s)	911
BstC8I	GCNNGC	7 cut(s)	619, 656, 677, 1420, 2219, 2584, 2632
BstDEI	CTNAG	9 cut(s)	829, 1080, 1167, 1423, 1599, 1791, 2163, 2291, 2509
BstDSI	CCRYGG	2 cut(s)	2008, 2500
BstF5I	GGATG	6 cut(s)	176, 288, 1849, 2197, 2527, 2719
BstFNI	CGCG	2 cut(s)	1097, 1431
BstH2I	RGCGCY	1 cut(s)	1628
BstHHI	GCGC	2 cut(s)	1433, 1627
BstKTI	GATC	6 cut(s)	1002, 1447, 1488, 1588, 2112, 2578
BstMAI	GTCTC	8 cut(s)	358, 385, 955, 1146, 1484, 1602, 1898, 2138
BstMBI	GATC	6 cut(s)	999, 1444, 1485, 1585, 2109, 2575
BstMCI	CGRYCG	1 cut(s)	1055
BstNI	CCWGG	2 cut(s)	1026, 1288
BstNSI	RCATGY	1 cut(s)	2586
BstSCI	CCNGG	7 cut(s)	270, 452, 1024, 1049, 1286, 2187, 2677
BstSLI	GKGCMC	1 cut(s)	2069
BstSNI	TACGTA	1 cut(s)	2537
BstUI	CGCG	2 cut(s)	1097, 1431
BstV1I	GCAGC	4 cut(s)	17, 526, 970, 1928
BstV2I	GAAGAC	1 cut(s)	1053
BstX2I	RGATCY	1 cut(s)	1585
BstXI	CCANNNNNNTGG	1 cut(s)	671
BstYI	RGATCY	1 cut(s)	1585
BsuRI	GGCC	7 cut(s)	275, 449, 1024, 1381, 1418, 1785, 2217
BtgI	CCRYGG	2 cut(s)	2008, 2500
BtgZI	GCGATG	3 cut(s)	319, 325, 2028
BtrI	CACGTC	1 cut(s)	331
BtsCI	GGATG	6 cut(s)	176, 288, 1849, 2197, 2527, 2719
BtsI	GCAGTG	2 cut(s)	1815, 1974
BtsIMutI	CAGTG	6 cut(s)	945, 1165, 1254, 1815, 1974, 2067
BveI	ACCTGC	2 cut(s)	1250, 1276
Cac8I	GCNNGC	7 cut(s)	619, 656, 677, 1420, 2219, 2584, 2632
CaiI	CAGNNNCTG	1 cut(s)	1144
CciI	TCATGA	1 cut(s)	2649
CfoI	GCGC	2 cut(s)	1433, 1627
Cfr13I	GGNCC	7 cut(s)	456, 1235, 1262, 1313, 1416, 1784, 2681
CpoI	CGGWCCG	1 cut(s)	456
CseI	GACGC	3 cut(s)	586, 596, 697
Csp6I	GTAC	8 cut(s)	519, 661, 1029, 1820, 1855, 2102, 2288, 2688
CspI	CGGWCCG	1 cut(s)	456
CviQI	GTAC	8 cut(s)	519, 661, 1029, 1820, 1855, 2102, 2288, 2688
DdeI	CTNAG	9 cut(s)	829, 1080, 1167, 1423, 1599, 1791, 2163, 2291, 2509
DpnI	GATC	6 cut(s)	1001, 1446, 1487, 1587, 2111, 2577
DpnII	GATC	6 cut(s)	999, 1444, 1485, 1585, 2109, 2575
EaeI	YGGCCR	1 cut(s)	273
Eam1104I	CTCTTC	5 cut(s)	29, 299, 756, 1731, 2424
EarI	CTCTTC	5 cut(s)	29, 299, 756, 1731, 2424
EciI	GGCGGA	7 cut(s)	160, 373, 458, 687, 739, 1185, 1197
Ecl136II	GAGCTC	2 cut(s)	1461, 2248
Eco105I	TACGTA	1 cut(s)	2537
Eco130I	CCWWGG	2 cut(s)	1376, 2500
Eco147I	AGGCCT	1 cut(s)	449
Eco24I	GRGCYC	2 cut(s)	1463, 2250
Eco47I	GGWCC	5 cut(s)	456, 1235, 1262, 1313, 2681
Eco53kI	GAGCTC	2 cut(s)	1461, 2248
Eco57I	CTGAAG	2 cut(s)	1823, 2142
Eco88I	CYCGRG	1 cut(s)	2137
EcoICRI	GAGCTC	2 cut(s)	1461, 2248
EcoRII	CCWGG	2 cut(s)	1024, 1286
EcoT14I	CCWWGG	2 cut(s)	1376, 2500
EcoT22I	ATGCAT	1 cut(s)	1831
EcoT38I	GRGCYC	2 cut(s)	1463, 2250
ErhI	CCWWGG	2 cut(s)	1376, 2500
Esp3I	CGTCTC	3 cut(s)	358, 385, 2138
FalI	AAGNNNNNCTT	4 cut(s)	197, 229, 701, 733
FaqI	GGGAC	5 cut(s)	789, 960, 1033, 1326, 1418
FauI	CCCGC	3 cut(s)	486, 1102, 1285
FbaI	TGATCA	1 cut(s)	999
FblI	GTMKAC	1 cut(s)	1881
FokI	GGATG	6 cut(s)	163, 275, 1856, 2204, 2514, 2726
FriOI	GRGCYC	2 cut(s)	1463, 2250
FspBI	CTAG	5 cut(s)	57, 642, 1377, 2451, 2573
GlaI	GCGC	2 cut(s)	1432, 1626
GsaI	CCCAGC	1 cut(s)	1790
GsuI	CTGGAG	1 cut(s)	909
HaeII	RGCGCY	1 cut(s)	1628
HaeIII	GGCC	7 cut(s)	275, 449, 1024, 1381, 1418, 1785, 2217
HgaI	GACGC	3 cut(s)	586, 596, 697
HhaI	GCGC	2 cut(s)	1433, 1627
Hin1I	GRCGYC	2 cut(s)	588, 689
Hin6I	GCGC	2 cut(s)	1431, 1625
HinP1I	GCGC	2 cut(s)	1431, 1625
HincII	GTYRAC	2 cut(s)	1071, 2174
HindII	GTYRAC	2 cut(s)	1071, 2174
HindIII	AAGCTT	5 cut(s)	668, 877, 1778, 1955, 2210
Hpy166II	GTNNAC	7 cut(s)	508, 1071, 1265, 1331, 1507, 1882, 2174
Hpy188III	TCNNGA	9 cut(s)	888, 1489, 1568, 1700, 1961, 2232, 2413, 2573, 2650
Hpy8I	GTNNAC	7 cut(s)	508, 1071, 1265, 1331, 1507, 1882, 2174
Hpy99I	CGWCG	6 cut(s)	443, 503, 590, 602, 755, 758
HpyCH4III	ACNGT	5 cut(s)	490, 949, 1033, 1160, 2548
HpyCH4IV	ACGT	3 cut(s)	330, 1073, 2536
HpyF3I	CTNAG	9 cut(s)	829, 1080, 1167, 1423, 1599, 1791, 2163, 2291, 2509
HpySE526I	ACGT	3 cut(s)	330, 1073, 2536
Hsp92I	GRCGYC	2 cut(s)	588, 689
HspAI	GCGC	2 cut(s)	1431, 1625
Ksp22I	TGATCA	1 cut(s)	999
Kzo9I	GATC	6 cut(s)	999, 1444, 1485, 1585, 2109, 2575
LguI	GCTCTTC	1 cut(s)	1731
LmnI	GCTCC	8 cut(s)	626, 653, 682, 726, 1018, 1168, 1726, 2245
Lsp1109I	GCAGC	4 cut(s)	17, 526, 970, 1928
LweI	GCATC	3 cut(s)	905, 1834, 2005
MaeI	CTAG	5 cut(s)	57, 642, 1377, 2451, 2573
MaeII	ACGT	3 cut(s)	330, 1073, 2536
MaeIII	GTNAC	4 cut(s)	490, 1017, 1276, 1633
MalI	GATC	6 cut(s)	1001, 1446, 1487, 1587, 2111, 2577
MbiI	CCGCTC	1 cut(s)	648
MboI	GATC	6 cut(s)	999, 1444, 1485, 1585, 2109, 2575
MflI	RGATCY	1 cut(s)	1585
MhlI	GDGCHC	5 cut(s)	1165, 1463, 1974, 2069, 2250
MlyI	GAGTC	4 cut(s)	811, 986, 1252, 2390
MmeI	TCCRAC	7 cut(s)	134, 522, 594, 774, 966, 1748, 2681
Mph1103I	ATGCAT	1 cut(s)	1831
MseI	TTAA	8 cut(s)	1451, 1619, 1712, 1776, 1833, 1890, 2253, 2604
MslI	CAYNNNNRTG	2 cut(s)	904, 2549
MspA1I	CMGCKG	2 cut(s)	961, 1790
MspR9I	CCNGG	7 cut(s)	272, 454, 1026, 1051, 1288, 2189, 2679
Mva1269I	GAATGC	2 cut(s)	1261, 2465
MvaI	CCWGG	2 cut(s)	1026, 1288
MvnI	CGCG	2 cut(s)	1097, 1431
NciI	CCSGG	5 cut(s)	272, 454, 1051, 2189, 2679
NcoI	CCATGG	1 cut(s)	2500
NdeII	GATC	6 cut(s)	999, 1444, 1485, 1585, 2109, 2575
NlaIV	GGNNCC	9 cut(s)	748, 1014, 1035, 1314, 1587, 1722, 1985, 2002, 2707
NmeAIII	GCCGAG	3 cut(s)	537, 1245, 1519
NmuCI	GTSAC	3 cut(s)	490, 1017, 1276
NsiI	ATGCAT	1 cut(s)	1831
NspI	RCATGY	1 cut(s)	2586
NspV	TTCGAA	1 cut(s)	911
OliI	CACNNNNGTG	1 cut(s)	2549
PaeI	GCATGC	1 cut(s)	2586
PagI	TCATGA	1 cut(s)	2649
PaqCI	CACCTGC	1 cut(s)	1276
PceI	AGGCCT	1 cut(s)	449
PciSI	GCTCTTC	1 cut(s)	1731
PcsI	WCGNNNNNNNCGW	2 cut(s)	348, 594
PctI	GAATGC	2 cut(s)	1261, 2465
PfoI	TCCNGGA	3 cut(s)	452, 2187, 2677
PleI	GAGTC	4 cut(s)	810, 986, 1251, 2390
PpsI	GAGTC	4 cut(s)	810, 986, 1251, 2390
Ppu21I	YACGTR	1 cut(s)	2537
PshBI	ATTAAT	1 cut(s)	2253
Psp124BI	GAGCTC	2 cut(s)	1463, 2250
Psp1406I	AACGTT	1 cut(s)	1073
Psp6I	CCWGG	2 cut(s)	1024, 1286
PspFI	CCCAGC	1 cut(s)	1786
PspGI	CCWGG	2 cut(s)	1024, 1286
PspN4I	GGNNCC	9 cut(s)	748, 1014, 1035, 1314, 1587, 1722, 1985, 2002, 2707
PspPI	GGNCC	7 cut(s)	456, 1235, 1262, 1313, 1416, 1784, 2681
PsrI	GAACNNNNNNTAC	2 cut(s)	536, 568
PstNI	CAGNNNCTG	1 cut(s)	1144
PsuI	RGATCY	1 cut(s)	1585
PvuII	CAGCTG	2 cut(s)	961, 1790
RsaI	GTAC	8 cut(s)	520, 662, 1030, 1821, 1856, 2103, 2289, 2689
RsaNI	GTAC	8 cut(s)	519, 661, 1029, 1820, 1855, 2102, 2288, 2688
RseI	CAYNNNNRTG	2 cut(s)	904, 2549
Rsr2I	CGGWCCG	1 cut(s)	456
RsrII	CGGWCCG	1 cut(s)	456
SacI	GAGCTC	2 cut(s)	1463, 2250
SapI	GCTCTTC	1 cut(s)	1731
SaqAI	TTAA	8 cut(s)	1451, 1619, 1712, 1776, 1833, 1890, 2253, 2604
Sau3AI	GATC	6 cut(s)	999, 1444, 1485, 1585, 2109, 2575
Sau96I	GGNCC	7 cut(s)	456, 1235, 1262, 1313, 1416, 1784, 2681
SchI	GAGTC	4 cut(s)	811, 986, 1252, 2390
ScrFI	CCNGG	7 cut(s)	272, 454, 1026, 1051, 1288, 2189, 2679
SduI	GDGCHC	5 cut(s)	1165, 1463, 1974, 2069, 2250
SfaNI	GCATC	3 cut(s)	905, 1834, 2005
SfuI	TTCGAA	1 cut(s)	911
SinI	GGWCC	5 cut(s)	456, 1235, 1262, 1313, 2681
SmiMI	CAYNNNNRTG	2 cut(s)	904, 2549
SmlI	CTYRAG	1 cut(s)	2045
SmoI	CTYRAG	1 cut(s)	2045
SnaBI	TACGTA	1 cut(s)	2537
SphI	GCATGC	1 cut(s)	2586
SseBI	AGGCCT	1 cut(s)	449
SspI	AATATT	2 cut(s)	1606, 2495
SspMI	CTAG	5 cut(s)	57, 642, 1377, 2451, 2573
SstI	GAGCTC	2 cut(s)	1463, 2250
StuI	AGGCCT	1 cut(s)	449
StyD4I	CCNGG	7 cut(s)	270, 452, 1024, 1049, 1286, 2187, 2677
StyI	CCWWGG	2 cut(s)	1376, 2500
TaaI	ACNGT	5 cut(s)	490, 949, 1033, 1160, 2548
TaiI	ACGT	3 cut(s)	333, 1076, 2539
TaqI	TCGA	8 cut(s)	96, 423, 911, 1055, 1457, 1488, 1962, 2034
TaqII	GACCGA	1 cut(s)	473
TatI	WGTACW	4 cut(s)	1854, 2101, 2287, 2687
Tru1I	TTAA	8 cut(s)	1451, 1619, 1712, 1776, 1833, 1890, 2253, 2604
Tru9I	TTAA	8 cut(s)	1451, 1619, 1712, 1776, 1833, 1890, 2253, 2604
TscAI	CASTG	6 cut(s)	952, 1165, 1254, 1815, 1974, 2074
TseFI	GTSAC	3 cut(s)	490, 1017, 1276
TseI	GCWGC	4 cut(s)	5, 514, 958, 1916
Tsp45I	GTSAC	3 cut(s)	490, 1017, 1276
TspGWI	ACGGA	3 cut(s)	340, 1005, 1706
TspRI	CASTG	6 cut(s)	952, 1165, 1254, 1815, 1974, 2074
VpaK11BI	GGWCC	5 cut(s)	456, 1235, 1262, 1313, 2681
VspI	ATTAAT	1 cut(s)	2253
XapI	RAATTY	2 cut(s)	1548, 1796
XbaI	TCTAGA	1 cut(s)	2572
XceI	RCATGY	1 cut(s)	2586
XmaJI	CCTAGG	1 cut(s)	1376
XmiI	GTMKAC	1 cut(s)	1881
XspI	CTAG	5 cut(s)	57, 642, 1377, 2451, 2573
Zsp2I	ATGCAT	1 cut(s)	1831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.