Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0011760

Physical Location & Seq

Genomic Coordinates Reverse (-)

409151 .. 413960

Gene Structure 4810 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG006600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2748 bp

ATGGCAGCTCTCAGTACTCTCACTCTGATCATCTTCCTCCTCCGCTTCACCACCGCCACCTGTCACCGCCACCTCCTCCACCAGCCCTTCTTCCCAGTTGAATCAAACCCTCCAACCCAATCACCATCTTCCTCTCCTCCCCACCCCTCTCAAATTCCCAAAATGCCCTTCTCCTCCGCCTCATCCTCCTCCTCGACGCCACCTGATAATAACAAACCCTTCTTTCCCTCCATCAAACCCACGCCGCCTCCTCCCTCCCCAACAGCCCTCACCTCCTTCCCCGCCAACATTTCCTCCATCCTTTTCCCCCAACCCTCTTCCTCCTCCCCCCACCGCCACGTCATCGCCATCGCCGTCTCGGTCTCCGTCACCGCTGCACTCATCATCGCCTTCGCCGCTGCTTTTTTACTCTACCGCCGCCGCCGGAAGCTCGACCCGACCTCGGCCGACGACAAGGCCTCCAGAACCGACAGCCTCCGCCTGTTCCCGCCCAACACCGTCACCTCCGACGGAGTGCACAAGCAGCGTACCACACCCAACAGAACCACCGAGAACTTCCTCTACCTCGGCACATTATCCAGCGCTCATGGAAACGACGAACAAAGCGTCGCCACCACGAGCAATGCCAGCTCCAAGTTCGGGGTTTCAAGCCGGTCTGGCTCGCCGTATCAGAAGCTGGGCTCGCCGGAGCTGACGCCGCTTCCTCCACTTCCCAAGGACAATTTCATACGACGGAGCTACAAGCACGAACTGGGTTCCGACGATGATGAAGGGGAAGACGAGTTCTTTTCTCCGAGAGGCTCTTCTGCGAGTCCGAAAAACGTCGCCGGAGCAAGCTCAGATAGAGTGCTCAAGGCTGTAGAAGGCGACAACTTTGGAAGCAGGAGCTTCAATTCAAGAACTGCATCATACCCATGTTCAAAATCTGCTTCTCCAGTAAGTTCTGTGTCCAACACTGTCTCACCACAGTTGAACTTCAGTCCCACAAGCTTGAAATCGAACTCGCCGGACTCTGTGATCAATTTCATGGCACCGTCTCGGCCTGCTCCGATTCCGGTGGCAGTGTCCCGGTCATTGTCTTCGTCGTCTACTTTATCAGAGAGAGTTTCAGGGAATGTGCAGAGTTCCCCTGACTTTTTGACGCAGATGAAGCAGTCTCTAGTGAGAAACAATAGTGCTCCTAAGCGGTTTGTTCCAATAAGACTGCCTCCGCCGCCTCCTCCACCGCCACCACCCAGGTATTGGGAAGCTTCAGGGACTCCGGTGGCGAATGCAGGTCCACCTGTTCTTGTCACGCCTTCCGGGGCTCCTGTGGTTGAGAATACGGGACCAGTTTTGGCTGGTGAACCAACACAGAAGAATGACATTGAGGAAAAAAGCGAGGAAACTCCTAGGCCAAAGTTGAAGCCTTTACATTGGGACAAAGTTAGGGCCAGCTCAGACCGCGCTATGGTGTGGGATCAGTTAAAATCGAGCTCCTTTCAGTTGAATGAGGAAATGATCGAGACACTTTTTGTGGTAAACAATTCAAGTTTGACACCGAAAGAAAATGCTCGGCGACAGATTCTACCCTCTTTGAATCAGGAGAACCGTGTGCTGGATCCAAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCGCTCAATGTTACCATTGATGAAGTGTGTGAAGCGCTCTTGGAAGGTAATTCGGATTCTCTTGGAACGGAACTTCTTGAAAGTTTATTAAAGATGGCTCCAACCAAAGAGGAAGAATGGAAGCTAAAAGAGTTCAAAGATGAATCACCATTTAAGCTTGGCCCAGCTGAGAAATTTCTAAAGGCAGTGCTTGATGTACCTTATGCATTTAAGAGGGTGGATGCAATGCTGTACATTGCCAATTTTGATTCAGAAGTAGACTATCTTAAAAGGTCTTTTGAGACATTGGAGGCAGCTTGTGAAGAATTGAAGAACAGCAGAATGTTCTTTAAGCTTCTTGAAGCAGTGCTCAAAACTGGGAACCGCATGAATGTCGGCACCAACCGTGGTGATGCTCATGCCTTCAAGCTCGACACACTCCTGAAGCTGGTAGATGTGAAGGGCACTGATGGAAAAACTACTCTGTTGCATTTTGTAGTACAGGAGATCATCAGAGCTGAAGGTTCTCGTCTTTCGGGCGTGAATCAGGATGAAATGGCTGAGAGCAGTCAACAATCTTCTTTCCGGGATGATGTGGAGTTTAGGAAGCGTGGCCTGCAAGTTGTTTCAGGATTGAGTGGAGAGCTCATCAATGTAAAGAAAGCTGCTGGTATGGATTCGGATGTACTGAGCAACGAAGTAGCAAAGATTGCTGGGGGAATTACAAAGATTGAAGAAGTTGTAAAATTAATTGAAGGAAGTGCATTGAAGGAGAGTAGCCAGAAGTTCTTCGACTCCATGAATGGGTTCTTGAAGAAGGCAAGTGAAGAGATTGTGATGATTCAAGCTCGAGAGAAACTTGCATTCTGTATGGTGAAGGAAATAACAGAATATTTCCATGGGAACTCGGCTAAAGAAGAAGCTCATCCTTTCCGGATTTTCACGGTGGTGAGAGACTTCCTTTCAATTCTAGATCAGGCATGCAAGGTAGTTGGCAAAGTTAATGAAAGAACTATAGTTGGGTCTGCCCGTCAATTTCCAATTGTCATGAATCCAACCGTTCCACCAGTTTTTCCTGGACCAAGTACAAAGCAGCATTATGGTTCCTCGGATGATGAAACCTTGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030312 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0030838 GO:0031333 GO:0031334 GO:0032271 GO:0032272 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051016 GO:0051128 GO:0051129 GO:0051130 GO:0051493 GO:0051494 GO:0051495 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

915

Amino Acids

99.99

Weight (kDa)

8.43

Isoelectric Point (pI)

57.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	459 - 863	4.5e-115	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011760)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43800
fragaria_vesca	FvH4_1g00460
malus_domestica	MD02G1003800.v1.1 MD15G1147100.v1.1
prunus_persica	Prupe.7G267500_v2.0.a1
pyrus_communis	pycom02g00230 pycom15g13200
rosa_chinensis	RchiOBHm_Chr2g0084971
rosa_laevigata	RLG00000015652
rosa_multiflora	Rmu_co8206718.1_g000001 Rmu_sc0017508.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155670
rosa_rugosa	Rorug01G0457400
rosa_samantha	Rh2AG005000 Rh2BG006200 Rh2BG300200 Rh2CG006800 Rh2DG006600
rosa_wichuraiana	Rw2G000500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1265
AccB1I	GGYRCC	2 cut(s)	1030, 2015
AccB7I	CCANNNNNTGG	1 cut(s)	1242
AccI	GTMKAC	2 cut(s)	1088, 1896
AccII	CGCG	1 cut(s)	1446
AccIII	TCCGGA	1 cut(s)	2550
AclWI	GGATC	3 cut(s)	1467, 1595, 1608
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	2 cut(s)	153, 1811
AcuI	CTGAAG	4 cut(s)	961, 1236, 2081, 2157
AcyI	GRCGYC	2 cut(s)	197, 695
AfaI	GTAC	7 cut(s)	16, 529, 1836, 1871, 2118, 2304, 2704
AfeI	AGCGCT	2 cut(s)	583, 1674
AfiI	CCNNNNNNNGG	7 cut(s)	442, 639, 1242, 1450, 1597, 2065, 2421
AjiI	CACGTC	1 cut(s)	340
AjnI	CCWGG	2 cut(s)	1235, 2692
AjuI	GAANNNNNNNTTGG	4 cut(s)	152, 184, 707, 739
AleI	CACNNNNGTG	1 cut(s)	2564
AloI	GAACNNNNNNTCC	2 cut(s)	767, 799
Alw21I	GWGCWC	6 cut(s)	519, 852, 1180, 1478, 1989, 2265
Alw26I	GTCTC	9 cut(s)	361, 367, 964, 1041, 1161, 1499, 1617, 1913, 2565
Alw44I	GTGCAC	1 cut(s)	515
AlwI	GGATC	3 cut(s)	1467, 1595, 1608
AlwNI	CAGNNNCTG	1 cut(s)	676
Ama87I	CYCGRG	1 cut(s)	2466
Aor13HI	TCCGGA	1 cut(s)	2550
Aor51HI	AGCGCT	2 cut(s)	583, 1674
AoxI	GGCC	7 cut(s)	444, 456, 1040, 1394, 1431, 1798, 2230
ApaLI	GTGCAC	1 cut(s)	515
ApeKI	GCWGC	7 cut(s)	5, 374, 398, 523, 1931, 2282, 2710
ApoI	RAATTY	2 cut(s)	153, 1811
ArsI	GACNNNNNNTTYG	2 cut(s)	591, 623
AseI	ATTAAT	1 cut(s)	2366
Asp700I	GAANNNNTTC	2 cut(s)	2405, 2423
AspA2I	CCTAGG	1 cut(s)	1391
AspLEI	GCGC	4 cut(s)	584, 1448, 1642, 1675
AspS9I	GGNCC	5 cut(s)	1277, 1328, 1431, 1799, 2696
AsuC2I	CCSGG	3 cut(s)	1069, 1303, 2204
AvaI	CYCGRG	1 cut(s)	2466
AvaII	GGWCC	3 cut(s)	1277, 1328, 2696
AvrII	CCTAGG	1 cut(s)	1391
BaeGI	GKGCMC	2 cut(s)	519, 2084
BamHI	GGATCC	1 cut(s)	1600
BanI	GGYRCC	2 cut(s)	1030, 2015
BanII	GRGCYC	4 cut(s)	683, 1309, 1478, 2265
BauI	CACGAG	1 cut(s)	616
BbsI	GAAGAC	2 cut(s)	783, 1071
Bbv12I	GWGCWC	6 cut(s)	519, 852, 1180, 1478, 1989, 2265
BbvI	GCAGC	7 cut(s)	17, 361, 385, 535, 1943, 2269, 2722
BccI	CCATC	6 cut(s)	133, 239, 305, 356, 1726, 2081
BceAI	ACGGC	2 cut(s)	338, 649
BcgI	CGANNNNNNTGC	2 cut(s)	1993, 2027
BciT130I	CCWGG	2 cut(s)	1237, 2694
BclI	TGATCA	2 cut(s)	27, 1017
BcnI	CCSGG	3 cut(s)	1069, 1303, 2204
BcoDI	GTCTC	9 cut(s)	361, 367, 964, 1041, 1161, 1499, 1617, 1913, 2565
BfaI	CTAG	3 cut(s)	1160, 1392, 2588
BfmI	CTRYAG	2 cut(s)	858, 2631
BfoI	RGCGCY	3 cut(s)	585, 1643, 1676
BfuAI	ACCTGC	1 cut(s)	1265
BglI	GCCNNNNNGGC	1 cut(s)	657
BlnI	CCTAGG	1 cut(s)	1391
BmcAI	AGTACT	1 cut(s)	16
Bme1390I	CCNGG	5 cut(s)	1069, 1237, 1303, 2204, 2694
Bme18I	GGWCC	3 cut(s)	1277, 1328, 2696
BmeT110I	CYCGRG	1 cut(s)	2466
BmgBI	CACGTC	1 cut(s)	340
BmgT120I	GGNCC	5 cut(s)	1277, 1328, 1431, 1799, 2696
BmiI	GGNNCC	9 cut(s)	757, 1032, 1308, 1329, 1602, 1737, 2000, 2017, 2722
BmrFI	CCNGG	5 cut(s)	1069, 1237, 1303, 2204, 2694
BmrI	ACTGGG	3 cut(s)	89, 761, 2004
BmsI	GCATC	3 cut(s)	914, 1849, 2020
BmuI	ACTGGG	3 cut(s)	89, 761, 2004
BpiI	GAAGAC	2 cut(s)	783, 1071
BpmI	CTGGAG	2 cut(s)	445, 918
Bpu10I	CCTNAGC	1 cut(s)	1182
BpuEI	CTTGAG	1 cut(s)	836
BpuMI	CCSGG	3 cut(s)	1069, 1303, 2204
BsaHI	GRCGYC	2 cut(s)	197, 695
BsaI	GGTCTC	1 cut(s)	367
BsaJI	CCNNGG	9 cut(s)	441, 565, 714, 1235, 1302, 1391, 2023, 2515, 2724
BsaWI	WCCGGW	3 cut(s)	1054, 1261, 2550
BsaXI	ACNNNNNCTCC	6 cut(s)	232, 262, 278, 308, 443, 473
Bsc4I	CCNNNNNNNGG	7 cut(s)	442, 639, 1242, 1450, 1597, 2065, 2421
Bse118I	RCCGGY	1 cut(s)	651
Bse1I	ACTGG	6 cut(s)	95, 756, 935, 1331, 1999, 2684
Bse3DI	GCAATG	3 cut(s)	628, 1869, 1872
BseAI	TCCGGA	1 cut(s)	2550
BseBI	CCWGG	2 cut(s)	1237, 2694
BseDI	CCNNGG	9 cut(s)	441, 565, 714, 1235, 1302, 1391, 2023, 2515, 2724
BseGI	GGATG	8 cut(s)	182, 297, 1864, 2173, 2212, 2305, 2542, 2734
BseLI	CCNNNNNNNGG	7 cut(s)	442, 639, 1242, 1450, 1597, 2065, 2421
BseMI	GCAATG	3 cut(s)	628, 1869, 1872
BseMII	CTCAG	7 cut(s)	25, 852, 1452, 1628, 1797, 2169, 2297
BseNI	ACTGG	6 cut(s)	95, 756, 935, 1331, 1999, 2684
BseRI	GAGGAG	9 cut(s)	29, 65, 126, 163, 178, 181, 240, 313, 1209
BseSI	GKGCMC	2 cut(s)	519, 2084
BseX3I	CGGCCG	1 cut(s)	444
BseXI	GCAGC	7 cut(s)	17, 361, 385, 535, 1943, 2269, 2722
BseYI	CCCAGC	3 cut(s)	676, 1801, 2330
BsgI	GTGCAG	2 cut(s)	360, 1139
Bsh1236I	CGCG	1 cut(s)	1446
Bsh1285I	CGRYCG	1 cut(s)	447
BshFI	GGCC	7 cut(s)	446, 458, 1042, 1396, 1433, 1800, 2232
BshNI	GGYRCC	2 cut(s)	1030, 2015
BsiEI	CGRYCG	1 cut(s)	447
BsiHKAI	GWGCWC	6 cut(s)	519, 852, 1180, 1478, 1989, 2265
BsiHKCI	CYCGRG	1 cut(s)	2466
BslFI	GGGAC	5 cut(s)	966, 1051, 1270, 1341, 1433
BslI	CCNNNNNNNGG	7 cut(s)	442, 639, 1242, 1450, 1597, 2065, 2421
BsmAI	GTCTC	9 cut(s)	361, 367, 964, 1041, 1161, 1499, 1617, 1913, 2565
BsmBI	CGTCTC	2 cut(s)	361, 1041
BsmFI	GGGAC	5 cut(s)	966, 1051, 1270, 1341, 1433
BsmI	GAATGC	2 cut(s)	1276, 2480
BsnI	GGCC	7 cut(s)	446, 458, 1042, 1396, 1433, 1800, 2232
Bso31I	GGTCTC	1 cut(s)	367
BsoBI	CYCGRG	1 cut(s)	2466
Bsp1286I	GDGCHC	9 cut(s)	519, 683, 852, 1180, 1309, 1478, 1989, 2084, 2265
Bsp13I	TCCGGA	1 cut(s)	2550
Bsp1407I	TGTACA	1 cut(s)	1869
Bsp143I	GATC	7 cut(s)	27, 1017, 1459, 1500, 1600, 2124, 2590
Bsp19I	CCATGG	1 cut(s)	2515
BspANI	GGCC	7 cut(s)	446, 458, 1042, 1396, 1433, 1800, 2232
BspCNI	CTCAG	7 cut(s)	24, 851, 1451, 1627, 1798, 2170, 2298
BspEI	TCCGGA	1 cut(s)	2550
BspFNI	CGCG	1 cut(s)	1446
BspHI	TCATGA	1 cut(s)	2664
BspLI	GGNNCC	9 cut(s)	757, 1032, 1308, 1329, 1602, 1737, 2000, 2017, 2722
BspMI	ACCTGC	1 cut(s)	1265
BspPI	GGATC	3 cut(s)	1467, 1595, 1608
BspQI	GCTCTTC	1 cut(s)	808
BspT107I	GGYRCC	2 cut(s)	1030, 2015
BspTNI	GGTCTC	1 cut(s)	367
BsrDI	GCAATG	3 cut(s)	628, 1869, 1872
BsrFI	RCCGGY	1 cut(s)	651
BsrGI	TGTACA	1 cut(s)	1869
BsrI	ACTGG	6 cut(s)	95, 756, 935, 1331, 1999, 2684
BssAI	RCCGGY	1 cut(s)	651
BssECI	CCNNGG	9 cut(s)	441, 565, 714, 1235, 1302, 1391, 2023, 2515, 2724
BssMI	GATC	7 cut(s)	27, 1017, 1459, 1500, 1600, 2124, 2590
BssNI	GRCGYC	2 cut(s)	197, 695
BssSI	CACGAG	1 cut(s)	616
BssT1I	CCWWGG	3 cut(s)	714, 1391, 2515
Bst2BI	CACGAG	1 cut(s)	616
Bst2UI	CCWGG	2 cut(s)	1237, 2694
Bst4CI	ACNGT	8 cut(s)	499, 958, 969, 1035, 1592, 2024, 2563, 2677
Bst6I	CTCTTC	3 cut(s)	322, 808, 2439
BstACI	GRCGYC	2 cut(s)	197, 695
BstAPI	GCANNNNNTGC	1 cut(s)	2327
BstAUI	TGTACA	1 cut(s)	1869
BstC8I	GCNNGC	8 cut(s)	628, 662, 683, 835, 1044, 1435, 2234, 2599
BstDEI	CTNAG	8 cut(s)	11, 838, 1182, 1438, 1614, 1806, 2178, 2306
BstDSI	CCRYGG	2 cut(s)	2023, 2515
BstF5I	GGATG	8 cut(s)	182, 297, 1864, 2173, 2212, 2305, 2542, 2734
BstFNI	CGCG	1 cut(s)	1446
BstH2I	RGCGCY	3 cut(s)	585, 1643, 1676
BstHHI	GCGC	4 cut(s)	584, 1448, 1642, 1675
BstKTI	GATC	7 cut(s)	30, 1020, 1462, 1503, 1603, 2127, 2593
BstMAI	GTCTC	9 cut(s)	361, 367, 964, 1041, 1161, 1499, 1617, 1913, 2565
BstMBI	GATC	7 cut(s)	27, 1017, 1459, 1500, 1600, 2124, 2590
BstMCI	CGRYCG	1 cut(s)	447
BstNI	CCWGG	2 cut(s)	1237, 2694
BstNSI	RCATGY	1 cut(s)	2601
BstSCI	CCNGG	5 cut(s)	1067, 1235, 1301, 2202, 2692
BstSFI	CTRYAG	2 cut(s)	858, 2631
BstSLI	GKGCMC	2 cut(s)	519, 2084
BstUI	CGCG	1 cut(s)	1446
BstV1I	GCAGC	7 cut(s)	17, 361, 385, 535, 1943, 2269, 2722
BstV2I	GAAGAC	2 cut(s)	783, 1071
BstX2I	RGATCY	1 cut(s)	1600
BstYI	RGATCY	1 cut(s)	1600
BstZI	CGGCCG	1 cut(s)	444
BsuRI	GGCC	7 cut(s)	446, 458, 1042, 1396, 1433, 1800, 2232
BtgI	CCRYGG	2 cut(s)	2023, 2515
BtgZI	GCGATG	3 cut(s)	328, 334, 370
BtrI	CACGTC	1 cut(s)	340
BtsCI	GGATG	8 cut(s)	182, 297, 1864, 2173, 2212, 2305, 2542, 2734
BtsI	GCAGTG	3 cut(s)	1068, 1830, 1989
BtsIMutI	CAGTG	5 cut(s)	954, 1068, 1830, 1989, 2082
BveI	ACCTGC	1 cut(s)	1265
Cac8I	GCNNGC	8 cut(s)	628, 662, 683, 835, 1044, 1435, 2234, 2599
CaiI	CAGNNNCTG	1 cut(s)	676
CciI	TCATGA	1 cut(s)	2664
CfoI	GCGC	4 cut(s)	584, 1448, 1642, 1675
Cfr10I	RCCGGY	1 cut(s)	651
Cfr13I	GGNCC	5 cut(s)	1277, 1328, 1431, 1799, 2696
CseI	GACGC	4 cut(s)	205, 595, 703, 1150
Csp6I	GTAC	7 cut(s)	15, 528, 1835, 1870, 2117, 2303, 2703
CviAII	CATG	9 cut(s)	587, 915, 1027, 2005, 2036, 2416, 2516, 2598, 2665
CviQI	GTAC	7 cut(s)	15, 528, 1835, 1870, 2117, 2303, 2703
DdeI	CTNAG	8 cut(s)	11, 838, 1182, 1438, 1614, 1806, 2178, 2306
DpnI	GATC	7 cut(s)	29, 1019, 1461, 1502, 1602, 2126, 2592
DpnII	GATC	7 cut(s)	27, 1017, 1459, 1500, 1600, 2124, 2590
EaeI	YGGCCR	1 cut(s)	444
EagI	CGGCCG	1 cut(s)	444
Eam1104I	CTCTTC	3 cut(s)	322, 808, 2439
EarI	CTCTTC	3 cut(s)	322, 808, 2439
EciI	GGCGGA	3 cut(s)	166, 467, 1200
Ecl136II	GAGCTC	2 cut(s)	1476, 2263
EclXI	CGGCCG	1 cut(s)	444
Eco130I	CCWWGG	3 cut(s)	714, 1391, 2515
Eco147I	AGGCCT	1 cut(s)	458
Eco24I	GRGCYC	4 cut(s)	683, 1309, 1478, 2265
Eco31I	GGTCTC	1 cut(s)	367
Eco47I	GGWCC	3 cut(s)	1277, 1328, 2696
Eco47III	AGCGCT	2 cut(s)	583, 1674
Eco52I	CGGCCG	1 cut(s)	444
Eco53kI	GAGCTC	2 cut(s)	1476, 2263
Eco57I	CTGAAG	4 cut(s)	961, 1236, 2081, 2157
Eco88I	CYCGRG	1 cut(s)	2466
EcoICRI	GAGCTC	2 cut(s)	1476, 2263
EcoRII	CCWGG	2 cut(s)	1235, 2692
EcoT14I	CCWWGG	3 cut(s)	714, 1391, 2515
EcoT22I	ATGCAT	1 cut(s)	1846
EcoT38I	GRGCYC	4 cut(s)	683, 1309, 1478, 2265
ErhI	CCWWGG	3 cut(s)	714, 1391, 2515
Esp3I	CGTCTC	2 cut(s)	361, 1041
FaeI	CATG	9 cut(s)	590, 918, 1030, 2008, 2039, 2419, 2519, 2601, 2668
FaqI	GGGAC	5 cut(s)	966, 1051, 1270, 1341, 1433
FatI	CATG	9 cut(s)	586, 914, 1026, 2004, 2035, 2415, 2515, 2597, 2664
FauI	CCCGC	2 cut(s)	289, 495
FbaI	TGATCA	2 cut(s)	27, 1017
FblI	GTMKAC	2 cut(s)	1088, 1896
FokI	GGATG	8 cut(s)	169, 284, 1871, 2180, 2219, 2312, 2529, 2741
FriOI	GRGCYC	4 cut(s)	683, 1309, 1478, 2265
FspBI	CTAG	3 cut(s)	1160, 1392, 2588
GlaI	GCGC	4 cut(s)	583, 1447, 1641, 1674
GsaI	CCCAGC	3 cut(s)	680, 1805, 2334
GsuI	CTGGAG	2 cut(s)	445, 918
HaeII	RGCGCY	3 cut(s)	585, 1643, 1676
HaeIII	GGCC	7 cut(s)	446, 458, 1042, 1396, 1433, 1800, 2232
HgaI	GACGC	4 cut(s)	205, 595, 703, 1150
HhaI	GCGC	4 cut(s)	584, 1448, 1642, 1675
Hin1I	GRCGYC	2 cut(s)	197, 695
Hin1II	CATG	9 cut(s)	590, 918, 1030, 2008, 2039, 2419, 2519, 2601, 2668
Hin6I	GCGC	4 cut(s)	582, 1446, 1640, 1673
HinP1I	GCGC	4 cut(s)	582, 1446, 1640, 1673
HincII	GTYRAC	1 cut(s)	2189
HindII	GTYRAC	1 cut(s)	2189
HindIII	AAGCTT	4 cut(s)	988, 1248, 1793, 1970
Hpy166II	GTNNAC	7 cut(s)	517, 1089, 1280, 1346, 1522, 1897, 2189
Hpy8I	GTNNAC	7 cut(s)	517, 1089, 1280, 1346, 1522, 1897, 2189
Hpy99I	CGWCG	9 cut(s)	199, 452, 512, 599, 611, 735, 764, 827, 1087
HpyCH4III	ACNGT	8 cut(s)	499, 958, 969, 1035, 1592, 2024, 2563, 2677
HpyCH4IV	ACGT	2 cut(s)	339, 822
HpyF3I	CTNAG	8 cut(s)	11, 838, 1182, 1438, 1614, 1806, 2178, 2306
HpySE526I	ACGT	2 cut(s)	339, 822
Hsp92I	GRCGYC	2 cut(s)	197, 695
Hsp92II	CATG	9 cut(s)	590, 918, 1030, 2008, 2039, 2419, 2519, 2601, 2668
HspAI	GCGC	4 cut(s)	582, 1446, 1640, 1673
Kpn2I	TCCGGA	1 cut(s)	2550
Ksp22I	TGATCA	2 cut(s)	27, 1017
Kzo9I	GATC	7 cut(s)	27, 1017, 1459, 1500, 1600, 2124, 2590
LguI	GCTCTTC	1 cut(s)	808
Lsp1109I	GCAGC	7 cut(s)	17, 361, 385, 535, 1943, 2269, 2722
LweI	GCATC	3 cut(s)	914, 1849, 2020
MaeI	CTAG	3 cut(s)	1160, 1392, 2588
MaeII	ACGT	2 cut(s)	339, 822
MaeIII	GTNAC	5 cut(s)	62, 367, 499, 1291, 1648
MalI	GATC	7 cut(s)	29, 1019, 1461, 1502, 1602, 2126, 2592
MboI	GATC	7 cut(s)	27, 1017, 1459, 1500, 1600, 2124, 2590
MfeI	CAATTG	1 cut(s)	2658
MflI	RGATCY	1 cut(s)	1600
MhlI	GDGCHC	9 cut(s)	519, 683, 852, 1180, 1309, 1478, 1989, 2084, 2265
MlyI	GAGTC	4 cut(s)	820, 1004, 1252, 2405
MmeI	TCCRAC	6 cut(s)	137, 531, 783, 975, 1763, 2696
Mph1103I	ATGCAT	1 cut(s)	1846
MroI	TCCGGA	1 cut(s)	2550
MroXI	GAANNNNTTC	2 cut(s)	2405, 2423
MseI	TTAA	8 cut(s)	1466, 1727, 1791, 1848, 1905, 1968, 2366, 2619
MslI	CAYNNNNRTG	2 cut(s)	913, 2564
MspA1I	CMGCKG	3 cut(s)	374, 398, 1805
MspR9I	CCNGG	5 cut(s)	1069, 1237, 1303, 2204, 2694
MunI	CAATTG	1 cut(s)	2658
Mva1269I	GAATGC	2 cut(s)	1276, 2480
MvaI	CCWGG	2 cut(s)	1237, 2694
MvnI	CGCG	1 cut(s)	1446
NciI	CCSGG	3 cut(s)	1069, 1303, 2204
NcoI	CCATGG	1 cut(s)	2515
NdeII	GATC	7 cut(s)	27, 1017, 1459, 1500, 1600, 2124, 2590
NlaIII	CATG	9 cut(s)	590, 918, 1030, 2008, 2039, 2419, 2519, 2601, 2668
NlaIV	GGNNCC	9 cut(s)	757, 1032, 1308, 1329, 1602, 1737, 2000, 2017, 2722
NmeAIII	GCCGAG	5 cut(s)	422, 546, 1018, 1534, 2504
NmuCI	GTSAC	4 cut(s)	62, 367, 499, 1291
NsiI	ATGCAT	1 cut(s)	1846
NspI	RCATGY	1 cut(s)	2601
OliI	CACNNNNGTG	1 cut(s)	2564
PaeI	GCATGC	1 cut(s)	2601
PaeR7I	CTCGAG	1 cut(s)	2466
PagI	TCATGA	1 cut(s)	2664
PceI	AGGCCT	1 cut(s)	458
PciSI	GCTCTTC	1 cut(s)	808
PcsI	WCGNNNNNNNCGW	2 cut(s)	351, 603
PctI	GAATGC	2 cut(s)	1276, 2480
PdmI	GAANNNNTTC	2 cut(s)	2405, 2423
PflMI	CCANNNNNTGG	1 cut(s)	1242
PfoI	TCCNGGA	2 cut(s)	2202, 2692
PleI	GAGTC	4 cut(s)	819, 1004, 1252, 2405
PpsI	GAGTC	4 cut(s)	819, 1004, 1252, 2405
PshBI	ATTAAT	1 cut(s)	2366
Psp124BI	GAGCTC	2 cut(s)	1478, 2265
Psp6I	CCWGG	2 cut(s)	1235, 2692
PspFI	CCCAGC	3 cut(s)	676, 1801, 2330
PspGI	CCWGG	2 cut(s)	1235, 2692
PspN4I	GGNNCC	9 cut(s)	757, 1032, 1308, 1329, 1602, 1737, 2000, 2017, 2722
PspPI	GGNCC	5 cut(s)	1277, 1328, 1431, 1799, 2696
PsrI	GAACNNNNNNTAC	2 cut(s)	545, 577
PstNI	CAGNNNCTG	1 cut(s)	676
PsuI	RGATCY	1 cut(s)	1600
PvuII	CAGCTG	1 cut(s)	1805
RsaI	GTAC	7 cut(s)	16, 529, 1836, 1871, 2118, 2304, 2704
RsaNI	GTAC	7 cut(s)	15, 528, 1835, 1870, 2117, 2303, 2703
RseI	CAYNNNNRTG	2 cut(s)	913, 2564
SacI	GAGCTC	2 cut(s)	1478, 2265
SapI	GCTCTTC	1 cut(s)	808
SaqAI	TTAA	8 cut(s)	1466, 1727, 1791, 1848, 1905, 1968, 2366, 2619
Sau3AI	GATC	7 cut(s)	27, 1017, 1459, 1500, 1600, 2124, 2590
Sau96I	GGNCC	5 cut(s)	1277, 1328, 1431, 1799, 2696
ScaI	AGTACT	1 cut(s)	16
SchI	GAGTC	4 cut(s)	820, 1004, 1252, 2405
ScrFI	CCNGG	5 cut(s)	1069, 1237, 1303, 2204, 2694
SduI	GDGCHC	9 cut(s)	519, 683, 852, 1180, 1309, 1478, 1989, 2084, 2265
SfaNI	GCATC	3 cut(s)	914, 1849, 2020
SfcI	CTRYAG	2 cut(s)	858, 2631
Sfr274I	CTCGAG	1 cut(s)	2466
SinI	GGWCC	3 cut(s)	1277, 1328, 2696
SlaI	CTCGAG	1 cut(s)	2466
SmiMI	CAYNNNNRTG	2 cut(s)	913, 2564
SmlI	CTYRAG	2 cut(s)	851, 2466
SmoI	CTYRAG	2 cut(s)	851, 2466
SphI	GCATGC	1 cut(s)	2601
SseBI	AGGCCT	1 cut(s)	458
SspI	AATATT	2 cut(s)	1621, 2510
SspMI	CTAG	3 cut(s)	1160, 1392, 2588
SstI	GAGCTC	2 cut(s)	1478, 2265
StuI	AGGCCT	1 cut(s)	458
StyD4I	CCNGG	5 cut(s)	1067, 1235, 1301, 2202, 2692
StyI	CCWWGG	3 cut(s)	714, 1391, 2515
TaaI	ACNGT	8 cut(s)	499, 958, 969, 1035, 1592, 2024, 2563, 2677
TaiI	ACGT	2 cut(s)	342, 825
TaqI	TCGA	8 cut(s)	194, 432, 998, 1472, 1503, 2049, 2409, 2467
TaqII	GACCGA	1 cut(s)	349
TatI	WGTACW	5 cut(s)	14, 1869, 2116, 2302, 2702
TauI	GCSGC	6 cut(s)	247, 398, 420, 423, 700, 1216
Tru1I	TTAA	8 cut(s)	1466, 1727, 1791, 1848, 1905, 1968, 2366, 2619
Tru9I	TTAA	8 cut(s)	1466, 1727, 1791, 1848, 1905, 1968, 2366, 2619
TscAI	CASTG	5 cut(s)	961, 1068, 1830, 1989, 2089
TseFI	GTSAC	4 cut(s)	62, 367, 499, 1291
TseI	GCWGC	7 cut(s)	5, 374, 398, 523, 1931, 2282, 2710
Tsp45I	GTSAC	4 cut(s)	62, 367, 499, 1291
TspGWI	ACGGA	4 cut(s)	355, 525, 748, 1721
TspRI	CASTG	5 cut(s)	961, 1068, 1830, 1989, 2089
Van91I	CCANNNNNTGG	1 cut(s)	1242
VneI	GTGCAC	1 cut(s)	515
VpaK11BI	GGWCC	3 cut(s)	1277, 1328, 2696
VspI	ATTAAT	1 cut(s)	2366
XapI	RAATTY	2 cut(s)	153, 1811
XbaI	TCTAGA	1 cut(s)	2587
XceI	RCATGY	1 cut(s)	2601
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1239
XhoI	CTCGAG	1 cut(s)	2466
XmaJI	CCTAGG	1 cut(s)	1391
XmiI	GTMKAC	2 cut(s)	1088, 1896
XmnI	GAANNNNTTC	2 cut(s)	2405, 2423
XspI	CTAG	3 cut(s)	1160, 1392, 2588
ZrmI	AGTACT	1 cut(s)	16
Zsp2I	ATGCAT	1 cut(s)	1846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.