FvH4_1g00660

QWRF motif-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0002767
Physical Location & Seq
Forward (+)
345843 .. 351391
5549 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g00660.t6

Sequence Viewer

Length: 1842 bp
ATGGTGTGGATGGATGTAGGTGAATCAGACCGCAGGGAGATCCCTAGACCACCGTTGGTTCCCGCCGAAAAGTACAATGCAGCTTCTTCAATCGCCGCCGCCACGCGCCGCCCTCGAATCCGGGAAGTCAGCTCCCGCTACAAGTCACCGACGCCCTCCCGGCCTACCTCAACCGCAACCGTCGGACGTTCTTCATCTCCAAGCGTTTCGAGAACGCCGCGTTCTCCATCATCATCATCATCGTCGGCGCCGAAGAGATCACTGTCCGCGGACCGGAGGAGGCCGGCCACGCCTCCTTCGCCGTCGTCTCAATCGACGCCGGTGAAGGATTCAGCGGCGGATGTTTCGTCGAGAAGAAATGGTCGGTTGCCTGAAGGGGGCTTGTGGCCTTCAACGATGAGAAGCTTGAGCGTTTCGTTTCAGTCTGATACGATTTCGATTCCTGTTAGTGTTAGTAAGAAGGAGAAGCCTGCAGTGACTAGTGCTTTATCGGATCGGACTTTGAGGTCTTCGTCCAATGTGGCTCATAGACAGGGGGAGACAGCTCCGAGGAAGCTCACACCGGAGAGGAAGAGGAGCCCTCTTAGAGGGAAGAATGTGTCTGATCAATCAGAGAATTCGAAACCTGTGGAGAGTGTGCATTCTAGATTGATAGATCAGCATCGATGGCCTAGTAGAATCGGTGGCAAAGTGTCTTTAAATTCCAATTCCAACTCATTAAACACAAGTATGGATCTTGGGCCTAGGATCATTAAGCTTGCCACACCAGCTCCCGGAGTTGGGGCACCTATGCTAAGACGAATGCCTGCAGCTGATCGTTTGGGAAAGCCTGTACAGAAATCGGGTGGTGATGCTGCGATGTTATCAGCACCTCATGAACTTGGTAGATCGAATTCAGTTGATGAGAGTTCACTGCATAAGCTTGTCTCTAATAGGCTTTCAGAAAGGTTGTCAAGTGCAACTCCTAAAGTCAGATCCCTTTCGCGACCGTCCTCTCCTAGTAAGACCTCAATGTTCTCACCTTCTGTTTCAAGAGGTGCCAGTCCATCTCGGTCTTCAAGACCGTCTACTCCTCCTTCTAGAGGTGTTAGTCCATCGAAGACAAGGGTTTCGAGTACTTCTTGTCAATCGAGCAGCGCAACTTCTGTGCTTAGTTTCATTGCTGATTTCAAGGGGAAAAAGAGTGCAGCTTACGTTGAAGATGCTCATCAGCTGCGGCTACTTCACAATAGATTTTTGCAGTGGAGATTTACTAATGCCAGGGCAGAGGCTATACTTTATATTCAGAAAGTAACTGCAGAGAGAACTCTATTGGATGTGTGGAACACTACGCTAAGCTTGTGGGATTCAGTAATCAGGAAAAGAATCAAACTCCAGCAGTTAAATCTTGAGCTTAAGCTGAAGTCTGTATTGAATGGTCAGATGGACTATCTTGATGACTGGGCTTTACTTGAAAGAGATCATATTGCTGCTTTTTCTGGGGCTATGGAAGATTTGGAGGCAAGCACTCTCCGTCTTCCAATAACTGGAGGGGCAAGGACGGATATTGACTCTTTGAAGGTAGCTATTTGCTCTGCTGTTGATGTGATGCAGGCAATGGGATCCTCCATATGCTCTTTGCTCTCTAGGGTGGAGGGCGTGAATGGTTTGGTTTCAGAACTTGCTGTTGTAGCAGCGCAAGAGAAAGCCATGCTTGACGAATGTGAATCATTGCTGGCTTCAGCAGCAGCTATGCAGGTCGAGGAATACAGCCTTAAGACGCAACTCATACAAATGAAACAAGATTTGGGAACTGTCAGCAGCCAATTTTGGCAACCAAGACACCTTCTTGACCCTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
QWRF

Protein Analysis

614

Amino Acids

66.5

Weight (kDa)

10.32

Isoelectric Point (pI)

62.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QWRF PF04484 311 - 566 2.5e-92 QWRF family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 505
Acc36I ACCTGC 1 cut(s) 1726
AccB1I GGYRCC 3 cut(s) 247, 784, 1037
AccB7I CCANNNNNTGG 1 cut(s) 1526
AccI GTMKAC 1 cut(s) 1067
AccII CGCG 4 cut(s) 106, 220, 269, 985
AclWI GGATC 7 cut(s) 34, 501, 741, 755, 969, 1596, 1609
AcoI YGGCCR 1 cut(s) 285
AcsI RAATTY 3 cut(s) 616, 700, 892
AcuI CTGAAG 3 cut(s) 393, 1421, 1704
AcyI GRCGYC 3 cut(s) 152, 248, 317
AfaI GTAC 3 cut(s) 74, 834, 1117
AfiI CCNNNNNNNGG 8 cut(s) 273, 377, 587, 773, 779, 780, 1082, 1526
AflII CTTAAG 2 cut(s) 1394, 1754
AgsI TTSAA 9 cut(s) 90, 393, 1032, 1059, 1171, 1199, 1414, 1454, 1558
AhlI ACTAGT 1 cut(s) 479
AjnI CCWGG 1 cut(s) 1259
AjuI GAANNNNNNNTTGG 2 cut(s) 1769, 1801
Alw26I GTCTC 3 cut(s) 312, 533, 931
AlwI GGATC 7 cut(s) 34, 501, 741, 755, 969, 1596, 1609
AoxI GGCC 6 cut(s) 161, 281, 285, 386, 668, 740
ApoI RAATTY 3 cut(s) 616, 700, 892
ArsI GACNNNNNNTTYG 2 cut(s) 1093, 1125
AspA2I CCTAGG 1 cut(s) 743
AspLEI GCGC 4 cut(s) 108, 250, 1139, 1678
AspS9I GGNCC 2 cut(s) 271, 740
AsuC2I CCSGG 3 cut(s) 122, 160, 774
AsuHPI GGTGA 5 cut(s) 32, 138, 334, 860, 1011
AsuII TTCGAA 1 cut(s) 620
AvaII GGWCC 1 cut(s) 271
AvrII CCTAGG 1 cut(s) 743
BaeGI GKGCMC 1 cut(s) 787
BamHI GGATCC 1 cut(s) 1601
BanI GGYRCC 3 cut(s) 247, 784, 1037
BanII GRGCYC 1 cut(s) 581
BbsI GAAGAC 4 cut(s) 501, 1047, 1106, 1508
BccI CCATC 6 cut(s) 4, 235, 660, 1054, 1102, 1417
BceAI ACGGC 1 cut(s) 286
BciT130I CCWGG 1 cut(s) 1261
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 3 cut(s) 122, 160, 774
BcoDI GTCTC 3 cut(s) 312, 533, 931
BcuI ACTAGT 1 cut(s) 479
BfaI CTAG 9 cut(s) 45, 480, 645, 672, 744, 999, 1080, 1626, 1840
BfmI CTRYAG 3 cut(s) 471, 807, 1296
BfoI RGCGCY 1 cut(s) 251
BfrI CTTAAG 2 cut(s) 1394, 1754
BfuAI ACCTGC 1 cut(s) 1726
BglI GCCNNNNNGGC 1 cut(s) 160
BlnI CCTAGG 1 cut(s) 743
BlpI GCTNAGC 1 cut(s) 1334
BmcAI AGTACT 1 cut(s) 1117
Bme1390I CCNGG 4 cut(s) 122, 160, 774, 1261
Bme18I GGWCC 1 cut(s) 271
BmgT120I GGNCC 2 cut(s) 271, 740
BmiI GGNNCC 6 cut(s) 60, 249, 578, 786, 1039, 1603
BmrFI CCNGG 4 cut(s) 122, 160, 774, 1261
BmrI ACTGGG 1 cut(s) 1450
BmsI GCATC 4 cut(s) 670, 841, 1192, 1578
BmuI ACTGGG 1 cut(s) 1450
BpiI GAAGAC 4 cut(s) 501, 1047, 1106, 1508
BplI GAGNNNNNCTC 2 cut(s) 565, 597
BpmI CTGGAG 2 cut(s) 1358, 1548
Bpu1102I GCTNAGC 1 cut(s) 1334
Bpu14I TTCGAA 1 cut(s) 620
BpuEI CTTGAG 2 cut(s) 427, 1409
BpuMI CCSGG 3 cut(s) 122, 160, 774
Bsa29I ATCGAT 1 cut(s) 664
BsaBI GATNNNNATC 2 cut(s) 660, 1206
BsaHI GRCGYC 3 cut(s) 152, 248, 317
BsaJI CCNNGG 4 cut(s) 267, 548, 743, 1260
BsaWI WCCGGW 2 cut(s) 273, 562
BsaXI ACNNNNNCTCC 2 cut(s) 754, 784
Bsc4I CCNNNNNNNGG 8 cut(s) 273, 377, 587, 773, 779, 780, 1082, 1526
Bse118I RCCGGY 2 cut(s) 283, 319
Bse1I ACTGG 3 cut(s) 1041, 1445, 1531
Bse3DI GCAATG 3 cut(s) 1158, 1602, 1709
Bse8I GATNNNNATC 2 cut(s) 660, 1206
BseBI CCWGG 1 cut(s) 1261
BseCI ATCGAT 1 cut(s) 664
BseDI CCNNGG 4 cut(s) 267, 548, 743, 1260
BseGI GGATG 4 cut(s) 15, 19, 346, 1321
BseJI GATNNNNATC 2 cut(s) 660, 1206
BseLI CCNNNNNNNGG 8 cut(s) 273, 377, 587, 773, 779, 780, 1082, 1526
BseMI GCAATG 3 cut(s) 1158, 1602, 1709
BseNI ACTGG 3 cut(s) 1041, 1445, 1531
BseRI GAGGAG 3 cut(s) 292, 589, 1062
BseSI GKGCMC 1 cut(s) 787
BsgI GTGCAG 1 cut(s) 1206
Bsh1236I CGCG 4 cut(s) 106, 220, 269, 985
Bsh1285I CGRYCG 1 cut(s) 989
BshFI GGCC 6 cut(s) 163, 283, 287, 388, 670, 742
BshNI GGYRCC 3 cut(s) 247, 784, 1037
BshVI ATCGAT 1 cut(s) 664
BsiEI CGRYCG 1 cut(s) 989
BsiSI CCGG 7 cut(s) 121, 160, 274, 284, 320, 563, 774
BslI CCNNNNNNNGG 8 cut(s) 273, 377, 587, 773, 779, 780, 1082, 1526
BsmAI GTCTC 3 cut(s) 312, 533, 931
BsmBI CGTCTC 1 cut(s) 312
BsmI GAATGC 2 cut(s) 640, 807
BsnI GGCC 6 cut(s) 163, 283, 287, 388, 670, 742
Bsp119I TTCGAA 1 cut(s) 620
Bsp1286I GDGCHC 2 cut(s) 581, 787
Bsp1407I TGTACA 1 cut(s) 832
Bsp1720I GCTNAGC 1 cut(s) 1334
Bsp68I TCGCGA 1 cut(s) 985
BspANI GGCC 6 cut(s) 163, 283, 287, 388, 670, 742
BspDI ATCGAT 1 cut(s) 664
BspFNI CGCG 4 cut(s) 106, 220, 269, 985
BspHI TCATGA 1 cut(s) 874
BspLI GGNNCC 6 cut(s) 60, 249, 578, 786, 1039, 1603
BspMAI CTGCAG 3 cut(s) 475, 811, 1300
BspMI ACCTGC 1 cut(s) 1726
BspPI GGATC 7 cut(s) 34, 501, 741, 755, 969, 1596, 1609
BspT104I TTCGAA 1 cut(s) 620
BspT107I GGYRCC 3 cut(s) 247, 784, 1037
BspTI CTTAAG 2 cut(s) 1394, 1754
BsrDI GCAATG 3 cut(s) 1158, 1602, 1709
BsrFI RCCGGY 2 cut(s) 283, 319
BsrGI TGTACA 1 cut(s) 832
BsrI ACTGG 3 cut(s) 1041, 1445, 1531
BssAI RCCGGY 2 cut(s) 283, 319
BssECI CCNNGG 4 cut(s) 267, 548, 743, 1260
BssNI GRCGYC 3 cut(s) 152, 248, 317
BssT1I CCWWGG 1 cut(s) 743
Bst2UI CCWGG 1 cut(s) 1261
Bst4CI ACNGT 6 cut(s) 54, 181, 264, 990, 1065, 1795
Bst6I CTCTTC 2 cut(s) 248, 566
BstACI GRCGYC 3 cut(s) 152, 248, 317
BstAFI CTTAAG 2 cut(s) 1394, 1754
BstAUI TGTACA 1 cut(s) 832
BstBI TTCGAA 1 cut(s) 620
BstC8I GCNNGC 7 cut(s) 285, 471, 759, 807, 1504, 1593, 1716
BstDEI CTNAG 4 cut(s) 584, 794, 1151, 1334
BstDSI CCRYGG 1 cut(s) 267
BstENI CCTNNNNNAGG 2 cut(s) 585, 1080
BstF5I GGATG 4 cut(s) 15, 19, 346, 1321
BstFNI CGCG 4 cut(s) 106, 220, 269, 985
BstH2I RGCGCY 1 cut(s) 251
BstHHI GCGC 4 cut(s) 108, 250, 1139, 1678
BstMAI GTCTC 3 cut(s) 312, 533, 931
BstMCI CGRYCG 1 cut(s) 989
BstMWI GCNNNNNNNGC 7 cut(s) 160, 289, 298, 667, 767, 1670, 1724
BstNI CCWGG 1 cut(s) 1261
BstSCI CCNGG 4 cut(s) 120, 158, 772, 1259
BstSFI CTRYAG 3 cut(s) 471, 807, 1296
BstSLI GKGCMC 1 cut(s) 787
BstUI CGCG 4 cut(s) 106, 220, 269, 985
BstV2I GAAGAC 4 cut(s) 501, 1047, 1106, 1508
BstX2I RGATCY 4 cut(s) 39, 733, 974, 1601
BstYI RGATCY 4 cut(s) 39, 733, 974, 1601
Bsu15I ATCGAT 1 cut(s) 664
BsuRI GGCC 6 cut(s) 163, 283, 287, 388, 670, 742
BsuTUI ATCGAT 1 cut(s) 664
BtgI CCRYGG 1 cut(s) 267
BtgZI GCGATG 1 cut(s) 872
BtsCI GGATG 4 cut(s) 15, 19, 346, 1321
BtsI GCAGTG 3 cut(s) 480, 911, 1247
BtsIMutI CAGTG 4 cut(s) 260, 480, 911, 1247
BtuMI TCGCGA 1 cut(s) 985
BveI ACCTGC 1 cut(s) 1726
Cac8I GCNNGC 7 cut(s) 285, 471, 759, 807, 1504, 1593, 1716
CciI TCATGA 1 cut(s) 874
CfoI GCGC 4 cut(s) 108, 250, 1139, 1678
Cfr10I RCCGGY 2 cut(s) 283, 319
Cfr13I GGNCC 2 cut(s) 271, 740
Cfr42I CCGCGG 1 cut(s) 270
ClaI ATCGAT 1 cut(s) 664
CpoI CGGWCCG 1 cut(s) 271
CseI GACGC 3 cut(s) 160, 325, 1768
Csp6I GTAC 3 cut(s) 73, 833, 1116
CspI CGGWCCG 1 cut(s) 271
CviAII CATG 2 cut(s) 875, 1690
CviQI GTAC 3 cut(s) 73, 833, 1116
DdeI CTNAG 4 cut(s) 584, 794, 1151, 1334
DinI GGCGCC 1 cut(s) 249
DraI TTTAAA 1 cut(s) 699
DrdI GACNNNNNNGTC 1 cut(s) 505
DseDI GACNNNNNNGTC 1 cut(s) 505
EaeI YGGCCR 1 cut(s) 285
Eam1104I CTCTTC 2 cut(s) 248, 566
EarI CTCTTC 2 cut(s) 248, 566
EciI GGCGGA 1 cut(s) 353
Eco130I CCWWGG 1 cut(s) 743
Eco24I GRGCYC 1 cut(s) 581
Eco47I GGWCC 1 cut(s) 271
Eco57I CTGAAG 3 cut(s) 393, 1421, 1704
EcoNI CCTNNNNNAGG 2 cut(s) 585, 1080
EcoRI GAATTC 2 cut(s) 616, 892
EcoRII CCWGG 1 cut(s) 1259
EcoT14I CCWWGG 1 cut(s) 743
EcoT38I GRGCYC 1 cut(s) 581
EgeI GGCGCC 1 cut(s) 249
EheI GGCGCC 1 cut(s) 249
ErhI CCWWGG 1 cut(s) 743
Esp3I CGTCTC 1 cut(s) 312
FaeI CATG 2 cut(s) 878, 1693
FalI AAGNNNNNCTT 2 cut(s) 1677, 1709
FatI CATG 2 cut(s) 874, 1689
FauI CCCGC 2 cut(s) 70, 143
FauNDI CATATG 1 cut(s) 1610
FbaI TGATCA 1 cut(s) 604
FblI GTMKAC 1 cut(s) 1067
FokI GGATG 4 cut(s) 22, 26, 353, 1328
FriOI GRGCYC 1 cut(s) 581
FseI GGCCGGCC 1 cut(s) 287
FspBI CTAG 9 cut(s) 45, 480, 645, 672, 744, 999, 1080, 1626, 1840
GlaI GCGC 4 cut(s) 107, 249, 1138, 1677
GsuI CTGGAG 2 cut(s) 1358, 1548
HaeII RGCGCY 1 cut(s) 251
HaeIII GGCC 6 cut(s) 163, 283, 287, 388, 670, 742
HapII CCGG 7 cut(s) 121, 160, 274, 284, 320, 563, 774
HgaI GACGC 3 cut(s) 160, 325, 1768
HhaI GCGC 4 cut(s) 108, 250, 1139, 1678
Hin1I GRCGYC 3 cut(s) 152, 248, 317
Hin1II CATG 2 cut(s) 878, 1693
Hin6I GCGC 4 cut(s) 106, 248, 1137, 1676
HinP1I GCGC 4 cut(s) 106, 248, 1137, 1676
HindIII AAGCTT 4 cut(s) 403, 755, 920, 1336
HinfI GANTC 9 cut(s) 23, 117, 329, 439, 678, 1346, 1365, 1550, 1706
HpaII CCGG 7 cut(s) 121, 160, 274, 284, 320, 563, 774
HphI GGTGA 5 cut(s) 32, 138, 334, 860, 1011
Hpy166II GTNNAC 2 cut(s) 911, 1068
Hpy8I GTNNAC 2 cut(s) 911, 1068
Hpy99I CGWCG 6 cut(s) 154, 185, 247, 307, 319, 352
HpyAV CCTTC 9 cut(s) 306, 319, 368, 399, 454, 1032, 1086, 1552, 1835
HpyCH4III ACNGT 6 cut(s) 54, 181, 264, 990, 1065, 1795
HpyCH4IV ACGT 2 cut(s) 187, 1194
HpyF10VI GCNNNNNNNGC 7 cut(s) 160, 289, 298, 667, 767, 1670, 1724
HpyF3I CTNAG 4 cut(s) 584, 794, 1151, 1334
HpySE526I ACGT 2 cut(s) 187, 1194
Hsp92I GRCGYC 3 cut(s) 152, 248, 317
Hsp92II CATG 2 cut(s) 878, 1693
HspAI GCGC 4 cut(s) 106, 248, 1137, 1676
KasI GGCGCC 1 cut(s) 247
KroI GCCGGC 1 cut(s) 283
KroNI GCCGGC 1 cut(s) 285
Ksp22I TGATCA 1 cut(s) 604
KspI CCGCGG 1 cut(s) 270
LmnI GCTCC 4 cut(s) 137, 550, 576, 775
LweI GCATC 4 cut(s) 670, 841, 1192, 1578
MaeI CTAG 9 cut(s) 45, 480, 645, 672, 744, 999, 1080, 1626, 1840
MaeII ACGT 2 cut(s) 187, 1194
MaeIII GTNAC 3 cut(s) 144, 475, 1291
MflI RGATCY 4 cut(s) 39, 733, 974, 1601
MhlI GDGCHC 2 cut(s) 581, 787
MluCI AATT 5 cut(s) 616, 700, 706, 892, 1805
Mly113I GGCGCC 1 cut(s) 248
MlyI GAGTC 1 cut(s) 1544
MmeI TCCRAC 2 cut(s) 163, 735
MroNI GCCGGC 1 cut(s) 283
MseI TTAA 6 cut(s) 698, 719, 753, 1382, 1395, 1755
MslI CAYNNNNRTG 2 cut(s) 728, 1772
MspA1I CMGCKG 4 cut(s) 269, 335, 812, 1213
MspCI CTTAAG 2 cut(s) 1394, 1754
MspI CCGG 7 cut(s) 121, 160, 274, 284, 320, 563, 774
MspR9I CCNGG 4 cut(s) 122, 160, 774, 1261
Mva1269I GAATGC 2 cut(s) 640, 807
MvaI CCWGG 1 cut(s) 1261
MvnI CGCG 4 cut(s) 106, 220, 269, 985
MwoI GCNNNNNNNGC 7 cut(s) 160, 289, 298, 667, 767, 1670, 1724
NaeI GCCGGC 1 cut(s) 285
NarI GGCGCC 1 cut(s) 248
NciI CCSGG 3 cut(s) 122, 160, 774
NdeI CATATG 1 cut(s) 1610
NgoMIV GCCGGC 1 cut(s) 283
NlaIII CATG 2 cut(s) 878, 1693
NlaIV GGNNCC 6 cut(s) 60, 249, 578, 786, 1039, 1603
NmuCI GTSAC 2 cut(s) 144, 475
NruI TCGCGA 1 cut(s) 985
NspV TTCGAA 1 cut(s) 620
PagI TCATGA 1 cut(s) 874
PcsI WCGNNNNNNNCGW 2 cut(s) 248, 311
PctI GAATGC 2 cut(s) 640, 807
PdiI GCCGGC 1 cut(s) 285
PfeI GAWTC 8 cut(s) 23, 117, 329, 439, 678, 1346, 1365, 1706
PflMI CCANNNNNTGG 1 cut(s) 1526
PfoI TCCNGGA 2 cut(s) 120, 772
PleI GAGTC 1 cut(s) 1544
PluTI GGCGCC 1 cut(s) 251
PpsI GAGTC 1 cut(s) 1544
Psp6I CCWGG 1 cut(s) 1259
PspGI CCWGG 1 cut(s) 1259
PspN4I GGNNCC 6 cut(s) 60, 249, 578, 786, 1039, 1603
PspPI GGNCC 2 cut(s) 271, 740
PstI CTGCAG 3 cut(s) 475, 811, 1300
PsuI RGATCY 4 cut(s) 39, 733, 974, 1601
PvuII CAGCTG 2 cut(s) 812, 1213
RigI GGCCGGCC 1 cut(s) 287
RruI TCGCGA 1 cut(s) 985
RsaI GTAC 3 cut(s) 74, 834, 1117
RsaNI GTAC 3 cut(s) 73, 833, 1116
RseI CAYNNNNRTG 2 cut(s) 728, 1772
Rsr2I CGGWCCG 1 cut(s) 271
RsrII CGGWCCG 1 cut(s) 271
SacII CCGCGG 1 cut(s) 270
SaqAI TTAA 6 cut(s) 698, 719, 753, 1382, 1395, 1755
Sau96I GGNCC 2 cut(s) 271, 740
ScaI AGTACT 1 cut(s) 1117
SchI GAGTC 1 cut(s) 1544
ScrFI CCNGG 4 cut(s) 122, 160, 774, 1261
SduI GDGCHC 2 cut(s) 581, 787
SfaNI GCATC 4 cut(s) 670, 841, 1192, 1578
SfcI CTRYAG 3 cut(s) 471, 807, 1296
SfoI GGCGCC 1 cut(s) 249
Sfr303I CCGCGG 1 cut(s) 270
SfuI TTCGAA 1 cut(s) 620
SgrAI CRCCGGYG 1 cut(s) 319
SgrBI CCGCGG 1 cut(s) 270
SinI GGWCC 1 cut(s) 271
SmiMI CAYNNNNRTG 2 cut(s) 728, 1772
SmlI CTYRAG 4 cut(s) 406, 1388, 1394, 1754
SmoI CTYRAG 4 cut(s) 406, 1388, 1394, 1754
SpeI ACTAGT 1 cut(s) 479
Sse9I AATT 5 cut(s) 616, 700, 706, 892, 1805
SspDI GGCGCC 1 cut(s) 247
SspMI CTAG 9 cut(s) 45, 480, 645, 672, 744, 999, 1080, 1626, 1840
StyD4I CCNGG 4 cut(s) 120, 158, 772, 1259
StyI CCWWGG 1 cut(s) 743
TaaI ACNGT 6 cut(s) 54, 181, 264, 990, 1065, 1795
TaiI ACGT 2 cut(s) 190, 1197
TaqII GACCGA 1 cut(s) 1041
TasI AATT 5 cut(s) 616, 700, 706, 892, 1805
TatI WGTACW 3 cut(s) 72, 832, 1115
TauI GCSGC 6 cut(s) 98, 101, 111, 220, 338, 1219
TfiI GAWTC 8 cut(s) 23, 117, 329, 439, 678, 1346, 1365, 1706
Tru1I TTAA 6 cut(s) 698, 719, 753, 1382, 1395, 1755
Tru9I TTAA 6 cut(s) 698, 719, 753, 1382, 1395, 1755
TscAI CASTG 4 cut(s) 267, 480, 918, 1247
TseFI GTSAC 2 cut(s) 144, 475
Tsp45I GTSAC 2 cut(s) 144, 475
TspDTI ATGAA 4 cut(s) 183, 891, 1147, 1790
TspGWI ACGGA 2 cut(s) 1502, 1556
TspRI CASTG 4 cut(s) 267, 480, 918, 1247
Van91I CCANNNNNTGG 1 cut(s) 1526
Vha464I CTTAAG 2 cut(s) 1394, 1754
VpaK11BI GGWCC 1 cut(s) 271
XagI CCTNNNNNAGG 2 cut(s) 585, 1080
XapI RAATTY 3 cut(s) 616, 700, 892
XbaI TCTAGA 2 cut(s) 644, 1079
XmaJI CCTAGG 1 cut(s) 743
XmiI GTMKAC 1 cut(s) 1067
XspI CTAG 9 cut(s) 45, 480, 645, 672, 744, 999, 1080, 1626, 1840
ZrmI AGTACT 1 cut(s) 1117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.