QWRF motif-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G24070 AT2G24070 AT2G24070 AT4G30710 AT4G30710 AT4G30710 AT4G30710 AT4G30740 |
| fragaria_vesca | FvH4_1g00660 FvH4_1g00660 FvH4_1g00660 FvH4_1g00660 FvH4_1g00660 FvH4_1g00660 FvH4_1g00660 FvH4_1g00660 FvH4_1g00660 |
| malus_domestica | MD02G1005400.v1.1 MD15G1149900.v1.1 |
| prunus_persica | Prupe.7G265600_v2.0.a1 |
| pyrus_communis | pycom02g00420 pycom02g00430 pycom15g13390 pycom15g13400 |
| rosa_chinensis | RchiOBHm_Chr2g0085281 |
| rosa_laevigata | RLG00000015674 |
| rosa_multiflora | Rmu_co8372449.1_g000001 Rmu_co8388711.1_g000001 Rmu_sc0008510.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00155490 |
| rosa_rugosa | Rorug01G0459000 Rorug01G0459100 Rorug01G0459200 Rorug01G0459200 |
| rosa_samantha | Rh2AG007600 Rh2BG008300 Rh2CG009000 Rh2DG009400 |
| rosa_wichuraiana | Rw2G000720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 523 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1114 |
| Acc36I | ACCTGC | 2 cut(s) | 523, 1732 |
| AccB1I | GGYRCC | 1 cut(s) | 217 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 238, 605, 1532 |
| AccII | CGCG | 2 cut(s) | 824, 994 |
| AciI | CCGC | 5 cut(s) | 207, 272, 466, 822, 1169 |
| AclWI | GGATC | 2 cut(s) | 222, 702 |
| AcoI | YGGCCR | 2 cut(s) | 60, 641 |
| AcsI | RAATTY | 2 cut(s) | 589, 868 |
| AcuI | CTGAAG | 2 cut(s) | 1583, 1710 |
| AcyI | GRCGYC | 1 cut(s) | 350 |
| AfaI | GTAC | 3 cut(s) | 160, 1281, 1455 |
| AfeI | AGCGCT | 1 cut(s) | 1716 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 238, 560, 605, 734, 740, 1088, 1532 |
| AflII | CTTAAG | 1 cut(s) | 1400 |
| AgeI | ACCGGT | 1 cut(s) | 727 |
| AgsI | TTSAA | 6 cut(s) | 1146, 1205, 1321, 1390, 1420, 1460 |
| AjiI | CACGTC | 1 cut(s) | 771 |
| AjnI | CCWGG | 4 cut(s) | 116, 294, 733, 1265 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1775, 1807 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 184, 216 |
| Alw21I | GWGCWC | 2 cut(s) | 457, 1019 |
| Alw26I | GTCTC | 2 cut(s) | 397, 1268 |
| AlwI | GGATC | 2 cut(s) | 222, 702 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1532 |
| Aor51HI | AGCGCT | 1 cut(s) | 1716 |
| AoxI | GGCC | 6 cut(s) | 60, 365, 504, 641, 1045, 1431 |
| ApeKI | GCWGC | 7 cut(s) | 26, 572, 818, 1475, 1679, 1730, 1733 |
| ApoI | RAATTY | 2 cut(s) | 589, 868 |
| AsiGI | ACCGGT | 1 cut(s) | 727 |
| AspLEI | GCGC | 3 cut(s) | 754, 1224, 1717 |
| AspS9I | GGNCC | 2 cut(s) | 292, 902 |
| AsuHPI | GGTGA | 4 cut(s) | 73, 120, 623, 996 |
| AsuII | TTCGAA | 1 cut(s) | 485 |
| AsuNHI | GCTAGC | 1 cut(s) | 22 |
| AvaII | GGWCC | 2 cut(s) | 292, 902 |
| BaeGI | GKGCMC | 1 cut(s) | 222 |
| BalI | TGGCCA | 1 cut(s) | 643 |
| BanI | GGYRCC | 1 cut(s) | 217 |
| BanII | GRGCYC | 2 cut(s) | 554, 1019 |
| BauI | CACGAG | 1 cut(s) | 9 |
| BbsI | GAAGAC | 1 cut(s) | 1514 |
| Bbv12I | GWGCWC | 2 cut(s) | 457, 1019 |
| BbvCI | CCTCAGC | 1 cut(s) | 755 |
| BbvI | GCAGC | 7 cut(s) | 38, 559, 805, 1462, 1691, 1742, 1745 |
| BceAI | ACGGC | 1 cut(s) | 75 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 497, 531, 1454, 1488 |
| BciT130I | CCWGG | 4 cut(s) | 118, 296, 735, 1267 |
| BclI | TGATCA | 2 cut(s) | 577, 1423 |
| BcoDI | GTCTC | 2 cut(s) | 397, 1268 |
| BfaI | CTAG | 5 cut(s) | 23, 810, 1008, 1086, 1846 |
| BfmI | CTRYAG | 3 cut(s) | 306, 957, 1302 |
| BfoI | RGCGCY | 1 cut(s) | 1718 |
| BfrI | CTTAAG | 1 cut(s) | 1400 |
| BfuAI | ACCTGC | 2 cut(s) | 523, 1732 |
| BglII | AGATCT | 1 cut(s) | 965 |
| BisI | GCNGC | 8 cut(s) | 27, 573, 819, 822, 1476, 1680, 1731, 1734 |
| BlpI | GCTNAGC | 2 cut(s) | 1340, 1579 |
| BlsI | GCNGC | 8 cut(s) | 28, 574, 820, 823, 1477, 1681, 1732, 1735 |
| Bme1390I | CCNGG | 4 cut(s) | 118, 296, 735, 1267 |
| Bme18I | GGWCC | 2 cut(s) | 292, 902 |
| BmgBI | CACGTC | 1 cut(s) | 771 |
| BmgT120I | GGNCC | 2 cut(s) | 292, 902 |
| BmiI | GGNNCC | 4 cut(s) | 57, 219, 551, 732 |
| BmrFI | CCNGG | 4 cut(s) | 118, 296, 735, 1267 |
| BmrI | ACTGGG | 1 cut(s) | 1456 |
| BmsI | GCATC | 6 cut(s) | 766, 805, 998, 1198, 1584, 1616 |
| BmtI | GCTAGC | 1 cut(s) | 26 |
| BmuI | ACTGGG | 1 cut(s) | 1456 |
| BpiI | GAAGAC | 1 cut(s) | 1514 |
| BpmI | CTGGAG | 2 cut(s) | 1364, 1554 |
| Bpu10I | CCTNAGC | 1 cut(s) | 755 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1340, 1579 |
| Bpu14I | TTCGAA | 1 cut(s) | 485 |
| BpuEI | CTTGAG | 2 cut(s) | 1415, 1615 |
| Bsa29I | ATCGAT | 1 cut(s) | 637 |
| BsaBI | GATNNNNATC | 4 cut(s) | 232, 633, 970, 1212 |
| BsaHI | GRCGYC | 1 cut(s) | 350 |
| BsaJI | CCNNGG | 1 cut(s) | 1266 |
| BsaWI | WCCGGW | 1 cut(s) | 727 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 124, 154, 502, 532 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 238, 560, 605, 734, 740, 1088, 1532 |
| Bse118I | RCCGGY | 2 cut(s) | 289, 727 |
| Bse1I | ACTGG | 6 cut(s) | 400, 443, 599, 1451, 1526, 1537 |
| Bse3DI | GCAATG | 2 cut(s) | 194, 1608 |
| Bse8I | GATNNNNATC | 4 cut(s) | 232, 633, 970, 1212 |
| BseBI | CCWGG | 4 cut(s) | 118, 296, 735, 1267 |
| BseCI | ATCGAT | 1 cut(s) | 637 |
| BseDI | CCNNGG | 1 cut(s) | 1266 |
| BseGI | GGATG | 6 cut(s) | 10, 203, 323, 998, 1028, 1607 |
| BseJI | GATNNNNATC | 4 cut(s) | 232, 633, 970, 1212 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 238, 560, 605, 734, 740, 1088, 1532 |
| BseMI | GCAATG | 2 cut(s) | 194, 1608 |
| BseMII | CTCAG | 8 cut(s) | 464, 746, 1263, 1331, 1425, 1497, 1593, 1774 |
| BseNI | ACTGG | 6 cut(s) | 400, 443, 599, 1451, 1526, 1537 |
| BseRI | GAGGAG | 4 cut(s) | 510, 772, 1068, 1104 |
| BseSI | GKGCMC | 1 cut(s) | 222 |
| BseX3I | CGGCCG | 1 cut(s) | 60 |
| BseXI | GCAGC | 7 cut(s) | 38, 559, 805, 1462, 1691, 1742, 1745 |
| Bsh1236I | CGCG | 2 cut(s) | 824, 994 |
| Bsh1285I | CGRYCG | 2 cut(s) | 63, 466 |
| BshFI | GGCC | 6 cut(s) | 62, 367, 506, 643, 1047, 1433 |
| BshNI | GGYRCC | 1 cut(s) | 217 |
| BshTI | ACCGGT | 1 cut(s) | 727 |
| BshVI | ATCGAT | 1 cut(s) | 637 |
| BsiEI | CGRYCG | 2 cut(s) | 63, 466 |
| BsiHKAI | GWGCWC | 2 cut(s) | 457, 1019 |
| BsiSI | CCGG | 4 cut(s) | 59, 290, 353, 728 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 238, 560, 605, 734, 740, 1088, 1532 |
| BsmAI | GTCTC | 2 cut(s) | 397, 1268 |
| BsmI | GAATGC | 1 cut(s) | 613 |
| BsnI | GGCC | 6 cut(s) | 62, 367, 506, 643, 1047, 1433 |
| Bsp119I | TTCGAA | 1 cut(s) | 485 |
| Bsp1286I | GDGCHC | 4 cut(s) | 222, 457, 554, 1019 |
| Bsp143I | GATC | 7 cut(s) | 227, 577, 628, 694, 965, 1423, 1465 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1340, 1579 |
| Bsp68I | TCGCGA | 1 cut(s) | 994 |
| BspACI | CCGC | 5 cut(s) | 207, 272, 466, 822, 1169 |
| BspANI | GGCC | 6 cut(s) | 62, 367, 506, 643, 1047, 1433 |
| BspCNI | CTCAG | 8 cut(s) | 465, 747, 1264, 1332, 1424, 1496, 1592, 1773 |
| BspDI | ATCGAT | 1 cut(s) | 637 |
| BspFNI | CGCG | 2 cut(s) | 824, 994 |
| BspLI | GGNNCC | 4 cut(s) | 57, 219, 551, 732 |
| BspMAI | CTGCAG | 2 cut(s) | 961, 1306 |
| BspMI | ACCTGC | 2 cut(s) | 523, 1732 |
| BspOI | GCTAGC | 1 cut(s) | 26 |
| BspPI | GGATC | 2 cut(s) | 222, 702 |
| BspT104I | TTCGAA | 1 cut(s) | 485 |
| BspT107I | GGYRCC | 1 cut(s) | 217 |
| BspTI | CTTAAG | 1 cut(s) | 1400 |
| BsrDI | GCAATG | 2 cut(s) | 194, 1608 |
| BsrFI | RCCGGY | 2 cut(s) | 289, 727 |
| BsrI | ACTGG | 6 cut(s) | 400, 443, 599, 1451, 1526, 1537 |
| BssAI | RCCGGY | 2 cut(s) | 289, 727 |
| BssECI | CCNNGG | 1 cut(s) | 1266 |
| BssMI | GATC | 7 cut(s) | 227, 577, 628, 694, 965, 1423, 1465 |
| BssNI | GRCGYC | 1 cut(s) | 350 |
| BssSI | CACGAG | 1 cut(s) | 9 |
| Bst2BI | CACGAG | 1 cut(s) | 9 |
| Bst2UI | CCWGG | 4 cut(s) | 118, 296, 735, 1267 |
| Bst4CI | ACNGT | 3 cut(s) | 51, 1279, 1652 |
| BstACI | GRCGYC | 1 cut(s) | 350 |
| BstAFI | CTTAAG | 1 cut(s) | 1400 |
| BstBI | TTCGAA | 1 cut(s) | 485 |
| BstC8I | GCNNGC | 5 cut(s) | 24, 720, 981, 1510, 1599 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 558, 1086 |
| BstF5I | GGATG | 6 cut(s) | 10, 203, 323, 998, 1028, 1607 |
| BstFNI | CGCG | 2 cut(s) | 824, 994 |
| BstH2I | RGCGCY | 1 cut(s) | 1718 |
| BstHHI | GCGC | 3 cut(s) | 754, 1224, 1717 |
| BstKTI | GATC | 7 cut(s) | 230, 580, 631, 697, 968, 1426, 1468 |
| BstMAI | GTCTC | 2 cut(s) | 397, 1268 |
| BstMBI | GATC | 7 cut(s) | 227, 577, 628, 694, 965, 1423, 1465 |
| BstMCI | CGRYCG | 2 cut(s) | 63, 466 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1676, 1721, 1730 |
| BstNI | CCWGG | 4 cut(s) | 118, 296, 735, 1267 |
| BstNSI | RCATGY | 1 cut(s) | 896 |
| BstSCI | CCNGG | 4 cut(s) | 116, 294, 733, 1265 |
| BstSFI | CTRYAG | 3 cut(s) | 306, 957, 1302 |
| BstSLI | GKGCMC | 1 cut(s) | 222 |
| BstUI | CGCG | 2 cut(s) | 824, 994 |
| BstV1I | GCAGC | 7 cut(s) | 38, 559, 805, 1462, 1691, 1742, 1745 |
| BstV2I | GAAGAC | 1 cut(s) | 1514 |
| BstX2I | RGATCY | 3 cut(s) | 227, 694, 965 |
| BstYI | RGATCY | 3 cut(s) | 227, 694, 965 |
| BstZI | CGGCCG | 1 cut(s) | 60 |
| Bsu15I | ATCGAT | 1 cut(s) | 637 |
| BsuRI | GGCC | 6 cut(s) | 62, 367, 506, 643, 1047, 1433 |
| BsuTUI | ATCGAT | 1 cut(s) | 637 |
| BtgZI | GCGATG | 1 cut(s) | 975 |
| BtrI | CACGTC | 1 cut(s) | 771 |
| BtsCI | GGATG | 6 cut(s) | 10, 203, 323, 998, 1028, 1607 |
| BtsIMutI | CAGTG | 1 cut(s) | 1533 |
| BtuMI | TCGCGA | 1 cut(s) | 994 |
| BveI | ACCTGC | 2 cut(s) | 523, 1732 |
| Cac8I | GCNNGC | 5 cut(s) | 24, 720, 981, 1510, 1599 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1532 |
| CfoI | GCGC | 3 cut(s) | 754, 1224, 1717 |
| Cfr10I | RCCGGY | 2 cut(s) | 289, 727 |
| Cfr13I | GGNCC | 2 cut(s) | 292, 902 |
| ClaI | ATCGAT | 1 cut(s) | 637 |
| CseI | GACGC | 4 cut(s) | 188, 239, 358, 1795 |
| Csp6I | GTAC | 3 cut(s) | 159, 1280, 1454 |
| CspAI | ACCGGT | 1 cut(s) | 727 |
| CviAII | CATG | 2 cut(s) | 893, 1696 |
| CviQI | GTAC | 3 cut(s) | 159, 1280, 1454 |
| DpnI | GATC | 7 cut(s) | 229, 579, 630, 696, 967, 1425, 1467 |
| DpnII | GATC | 7 cut(s) | 227, 577, 628, 694, 965, 1423, 1465 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1114 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1114 |
| EaeI | YGGCCR | 2 cut(s) | 60, 641 |
| EagI | CGGCCG | 1 cut(s) | 60 |
| Ecl136II | GAGCTC | 1 cut(s) | 1017 |
| EclXI | CGGCCG | 1 cut(s) | 60 |
| Eco147I | AGGCCT | 1 cut(s) | 1047 |
| Eco24I | GRGCYC | 2 cut(s) | 554, 1019 |
| Eco47I | GGWCC | 2 cut(s) | 292, 902 |
| Eco47III | AGCGCT | 1 cut(s) | 1716 |
| Eco52I | CGGCCG | 1 cut(s) | 60 |
| Eco53kI | GAGCTC | 1 cut(s) | 1017 |
| Eco57I | CTGAAG | 2 cut(s) | 1583, 1710 |
| EcoICRI | GAGCTC | 1 cut(s) | 1017 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 558, 1086 |
| EcoRI | GAATTC | 1 cut(s) | 589 |
| EcoRII | CCWGG | 4 cut(s) | 116, 294, 733, 1265 |
| EcoT38I | GRGCYC | 2 cut(s) | 554, 1019 |
| FaeI | CATG | 2 cut(s) | 896, 1699 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 902, 934, 1683, 1715 |
| FatI | CATG | 2 cut(s) | 892, 1695 |
| FauI | CCCGC | 1 cut(s) | 279 |
| FauNDI | CATATG | 1 cut(s) | 1616 |
| FbaI | TGATCA | 2 cut(s) | 577, 1423 |
| Fnu4HI | GCNGC | 8 cut(s) | 27, 573, 819, 822, 1476, 1680, 1731, 1734 |
| FokI | GGATG | 6 cut(s) | 17, 190, 310, 985, 1015, 1594 |
| FriOI | GRGCYC | 2 cut(s) | 554, 1019 |
| Fsp4HI | GCNGC | 8 cut(s) | 27, 573, 819, 822, 1476, 1680, 1731, 1734 |
| FspBI | CTAG | 5 cut(s) | 23, 810, 1008, 1086, 1846 |
| GlaI | GCGC | 3 cut(s) | 753, 1223, 1716 |
| GluI | GCNGC | 8 cut(s) | 27, 573, 819, 822, 1476, 1680, 1731, 1734 |
| GsuI | CTGGAG | 2 cut(s) | 1364, 1554 |
| HaeII | RGCGCY | 1 cut(s) | 1718 |
| HaeIII | GGCC | 6 cut(s) | 62, 367, 506, 643, 1047, 1433 |
| HapII | CCGG | 4 cut(s) | 59, 290, 353, 728 |
| HgaI | GACGC | 4 cut(s) | 188, 239, 358, 1795 |
| HhaI | GCGC | 3 cut(s) | 754, 1224, 1717 |
| Hin1I | GRCGYC | 1 cut(s) | 350 |
| Hin1II | CATG | 2 cut(s) | 896, 1699 |
| Hin6I | GCGC | 3 cut(s) | 752, 1222, 1715 |
| HinP1I | GCGC | 3 cut(s) | 752, 1222, 1715 |
| HindIII | AAGCTT | 2 cut(s) | 527, 911 |
| HinfI | GANTC | 6 cut(s) | 299, 418, 738, 1352, 1371, 1556 |
| HpaII | CCGG | 4 cut(s) | 59, 290, 353, 728 |
| HphI | GGTGA | 4 cut(s) | 73, 120, 623, 996 |
| Hpy166II | GTNNAC | 2 cut(s) | 14, 1648 |
| Hpy188III | TCNNGA | 9 cut(s) | 11, 327, 618, 900, 993, 1059, 1086, 1363, 1835 |
| Hpy8I | GTNNAC | 2 cut(s) | 14, 1648 |
| HpyAV | CCTTC | 8 cut(s) | 162, 264, 378, 406, 427, 1065, 1092, 1558 |
| HpyCH4III | ACNGT | 3 cut(s) | 51, 1279, 1652 |
| HpyCH4IV | ACGT | 1 cut(s) | 770 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1676, 1721, 1730 |
| HpySE526I | ACGT | 1 cut(s) | 770 |
| Hsp92I | GRCGYC | 1 cut(s) | 350 |
| Hsp92II | CATG | 2 cut(s) | 896, 1699 |
| HspAI | GCGC | 3 cut(s) | 752, 1222, 1715 |
| Ksp22I | TGATCA | 2 cut(s) | 577, 1423 |
| Kzo9I | GATC | 7 cut(s) | 227, 577, 628, 694, 965, 1423, 1465 |
| LmnI | GCTCC | 2 cut(s) | 523, 549 |
| Lsp1109I | GCAGC | 7 cut(s) | 38, 559, 805, 1462, 1691, 1742, 1745 |
| LweI | GCATC | 6 cut(s) | 766, 805, 998, 1198, 1584, 1616 |
| MaeI | CTAG | 5 cut(s) | 23, 810, 1008, 1086, 1846 |
| MaeII | ACGT | 1 cut(s) | 770 |
| MaeIII | GTNAC | 5 cut(s) | 79, 126, 1036, 1297, 1528 |
| MalI | GATC | 7 cut(s) | 229, 579, 630, 696, 967, 1425, 1467 |
| MboI | GATC | 7 cut(s) | 227, 577, 628, 694, 965, 1423, 1465 |
| MboII | GAAGA | 8 cut(s) | 294, 342, 474, 660, 798, 1217, 1508, 1514 |
| MfeI | CAATTG | 1 cut(s) | 212 |
| MflI | RGATCY | 3 cut(s) | 227, 694, 965 |
| MhlI | GDGCHC | 4 cut(s) | 222, 457, 554, 1019 |
| MlsI | TGGCCA | 1 cut(s) | 643 |
| MluCI | AATT | 9 cut(s) | 108, 212, 317, 589, 673, 868, 883, 1194, 1811 |
| MluNI | TGGCCA | 1 cut(s) | 643 |
| MlyI | GAGTC | 1 cut(s) | 747 |
| MmeI | TCCRAC | 3 cut(s) | 161, 326, 486 |
| Mox20I | TGGCCA | 1 cut(s) | 643 |
| MscI | TGGCCA | 1 cut(s) | 643 |
| MseI | TTAA | 6 cut(s) | 558, 680, 837, 947, 1176, 1401 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1778 |
| Msp20I | TGGCCA | 1 cut(s) | 643 |
| MspA1I | CMGCKG | 1 cut(s) | 1583 |
| MspCI | CTTAAG | 1 cut(s) | 1400 |
| MspI | CCGG | 4 cut(s) | 59, 290, 353, 728 |
| MspR9I | CCNGG | 4 cut(s) | 118, 296, 735, 1267 |
| MunI | CAATTG | 1 cut(s) | 212 |
| Mva1269I | GAATGC | 1 cut(s) | 613 |
| MvaI | CCWGG | 4 cut(s) | 118, 296, 735, 1267 |
| MvnI | CGCG | 2 cut(s) | 824, 994 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1676, 1721, 1730 |
| NdeI | CATATG | 1 cut(s) | 1616 |
| NdeII | GATC | 7 cut(s) | 227, 577, 628, 694, 965, 1423, 1465 |
| NheI | GCTAGC | 1 cut(s) | 22 |
| NlaIII | CATG | 2 cut(s) | 896, 1699 |
| NlaIV | GGNNCC | 4 cut(s) | 57, 219, 551, 732 |
| NmeAIII | GCCGAG | 1 cut(s) | 142 |
| NmuCI | GTSAC | 3 cut(s) | 79, 126, 1528 |
| NruI | TCGCGA | 1 cut(s) | 994 |
| NspI | RCATGY | 1 cut(s) | 896 |
| NspV | TTCGAA | 1 cut(s) | 485 |
| PaqCI | CACCTGC | 1 cut(s) | 523 |
| PceI | AGGCCT | 1 cut(s) | 1047 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 94 |
| PctI | GAATGC | 1 cut(s) | 613 |
| PfeI | GAWTC | 5 cut(s) | 299, 418, 1352, 1371, 1556 |
| PflFI | GACNNNGTC | 1 cut(s) | 1111 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 238, 605, 1532 |
| PfoI | TCCNGGA | 2 cut(s) | 294, 733 |
| PinAI | ACCGGT | 1 cut(s) | 727 |
| PkrI | GCNGC | 8 cut(s) | 28, 574, 820, 823, 1477, 1681, 1732, 1735 |
| PleI | GAGTC | 1 cut(s) | 746 |
| PpsI | GAGTC | 1 cut(s) | 746 |
| Psp124BI | GAGCTC | 1 cut(s) | 1019 |
| Psp6I | CCWGG | 4 cut(s) | 116, 294, 733, 1265 |
| PspGI | CCWGG | 4 cut(s) | 116, 294, 733, 1265 |
| PspN4I | GGNNCC | 4 cut(s) | 57, 219, 551, 732 |
| PspPI | GGNCC | 2 cut(s) | 292, 902 |
| PstI | CTGCAG | 2 cut(s) | 961, 1306 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1532 |
| PsuI | RGATCY | 3 cut(s) | 227, 694, 965 |
| PsyI | GACNNNGTC | 1 cut(s) | 1111 |
| PvuII | CAGCTG | 1 cut(s) | 1583 |
| RruI | TCGCGA | 1 cut(s) | 994 |
| RsaI | GTAC | 3 cut(s) | 160, 1281, 1455 |
| RsaNI | GTAC | 3 cut(s) | 159, 1280, 1454 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1778 |
| SacI | GAGCTC | 1 cut(s) | 1019 |
| SaqAI | TTAA | 6 cut(s) | 558, 680, 837, 947, 1176, 1401 |
| SatI | GCNGC | 8 cut(s) | 27, 573, 819, 822, 1476, 1680, 1731, 1734 |
| Sau3AI | GATC | 7 cut(s) | 227, 577, 628, 694, 965, 1423, 1465 |
| Sau96I | GGNCC | 2 cut(s) | 292, 902 |
| SchI | GAGTC | 1 cut(s) | 747 |
| ScrFI | CCNGG | 4 cut(s) | 118, 296, 735, 1267 |
| SduI | GDGCHC | 4 cut(s) | 222, 457, 554, 1019 |
| SfaNI | GCATC | 6 cut(s) | 766, 805, 998, 1198, 1584, 1616 |
| SfcI | CTRYAG | 3 cut(s) | 306, 957, 1302 |
| SfuI | TTCGAA | 1 cut(s) | 485 |
| SinI | GGWCC | 2 cut(s) | 292, 902 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1778 |
| SmlI | CTYRAG | 3 cut(s) | 1394, 1400, 1630 |
| SmoI | CTYRAG | 3 cut(s) | 1394, 1400, 1630 |
| Sse9I | AATT | 9 cut(s) | 108, 212, 317, 589, 673, 868, 883, 1194, 1811 |
| SseBI | AGGCCT | 1 cut(s) | 1047 |
| SsiI | CCGC | 5 cut(s) | 207, 272, 466, 822, 1169 |
| SspMI | CTAG | 5 cut(s) | 23, 810, 1008, 1086, 1846 |
| SstI | GAGCTC | 1 cut(s) | 1019 |
| StuI | AGGCCT | 1 cut(s) | 1047 |
| StyD4I | CCNGG | 4 cut(s) | 116, 294, 733, 1265 |
| TaaI | ACNGT | 3 cut(s) | 51, 1279, 1652 |
| TaiI | ACGT | 1 cut(s) | 773 |
| TaqI | TCGA | 8 cut(s) | 97, 416, 485, 523, 603, 637, 862, 1060 |
| TasI | AATT | 9 cut(s) | 108, 212, 317, 589, 673, 868, 883, 1194, 1811 |
| TatI | WGTACW | 2 cut(s) | 1279, 1453 |
| TauI | GCSGC | 1 cut(s) | 824 |
| TfiI | GAWTC | 5 cut(s) | 299, 418, 1352, 1371, 1556 |
| Tru1I | TTAA | 6 cut(s) | 558, 680, 837, 947, 1176, 1401 |
| Tru9I | TTAA | 6 cut(s) | 558, 680, 837, 947, 1176, 1401 |
| TscAI | CASTG | 1 cut(s) | 1533 |
| TseFI | GTSAC | 3 cut(s) | 79, 126, 1528 |
| TseI | GCWGC | 7 cut(s) | 26, 572, 818, 1475, 1679, 1730, 1733 |
| Tsp45I | GTSAC | 3 cut(s) | 79, 126, 1528 |
| TspDTI | ATGAA | 3 cut(s) | 855, 1017, 1796 |
| TspGWI | ACGGA | 1 cut(s) | 1508 |
| TspRI | CASTG | 1 cut(s) | 1533 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1111 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 238, 605, 1532 |
| Vha464I | CTTAAG | 1 cut(s) | 1400 |
| VpaK11BI | GGWCC | 2 cut(s) | 292, 902 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 558, 1086 |
| XapI | RAATTY | 2 cut(s) | 589, 868 |
| XbaI | TCTAGA | 1 cut(s) | 1085 |
| XceI | RCATGY | 1 cut(s) | 896 |
| XspI | CTAG | 5 cut(s) | 23, 810, 1008, 1086, 1846 |