Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0005734

Physical Location & Seq

Genomic Coordinates Forward (+)

1044203 .. 1047792

Gene Structure 3590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g01990.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGAAGAAGCAATCTGCCTATCTATATATATATAAATCCAATCTTTACATTTTCAGTCTTGTTTCAAATTGGTCTGTGATGGCGAAAGTGAAGATTGCAGGGACATGGGTGGGTGTGTTGGAGGTTGAATTGGACAGCTGGACGGTGCCGATGTTGAGAGAAGAGGTTGCAAAGCGATCAAGCTGCGAGCCGGGGTCGATCAATTTGATTTGCGCCGGAAGGGTTTTGAAAGACGGCGACGGCAGCGAGAGTTTGACCCAGTTGGGTGTTAAGAACAACGCCAAGATTCTGGCGAGCAGGGTTTGTGCTCAGGAGGGTAAGTCTTTGGGTCAGGAGTTGATGGCTGAGACTGAACGGGCTCAGAGACTAGCGAGAGTCAAGGCTGCAGCGACTGCGTTGTCCAAAAGGCACGCGGATGGTTCATTGCCGATTGAAGATTTCAATATAGTACTGGAAGATCAGAGTGGGAAGAAAGTGCAAATGGGGTCGGAGACTGATCAACGGGCAATCATGATGGGACTGATGCTTCATACCAATGCAAAGCAACTGATTAAAGCACAAAATTACCAAGATGCATTGGAAGTGCTCACCATGGGGGAGGAAGCTTTCTCTCTCTGTGATCCGAAGGTTATTGAGTTGGTTGACAATCCTTCCATACTGCAAATCGATATGGTTTGGTGTTATTTCATGCTTAGAGACATCAACTGGCTCTCAGTGGCAGGAATTCGCCTTGAGAAAGCCAGACAAGGACTTGAACGAGCTCATGGGAAGGACTCTTCTCGTGTTAGGCTCCTTCAGGCAGGTCACTATCCAGAGCGTGCACTATATTTGAGACTGGAGCTGCTGGAAGGTGTGGTGGCATATCACAGTGGACAGGTTGATAAGTCAATGAAGGTGTTGACCTCTGCACAAGAGAAGTTCACCCAGCTTCAGGTGCCGGATGAATCCCTTTCTCTTGTGATGAGTATGGGCTTTAGAGAAAGAGATGCAAAAAGGGCATTGAGGATGAGCAATCAAGATGTCTCCAGTGCTGTTGATTTTCTTGTTGACCAGAAAGCAAAGAGAGCCCAAAAGCGGGAAGATGATATTCAGCGGCGTAATGAAATTATGGAGCAAAAGAAGTATGGTACCACACCCCTGAAGAAAGCTGTGGATATGGAGAAATTGAACCAACTGGTCTCCATTGGATTTGAAAAGGAACTTGCTGCTGAAGCACTTCGAAGAAATGAGAATGACAGTGAGAAGGCATTAGATGATTTGACAAATCCAGAGACCAATTCTTCCATTCAGCAACACCTTGAATCAAGGAAAAATAAGCGACAGCGCCAAGCAGTAGATGCTTCAGTTGAAGCTCTTGTACGCATGGGCTTTGACAGATCATTAGTGGTCGAGGCTTTGCAGGGTGGAGGGACAATGGACCAAGCAATCCGTCAACTGCTCTCAGGACAGGCACCAAACCCTACAAATGCTGCTGGCCAATCAGAGGCAATCCCTGCAGTTGATGCTAACAACAATAGCCAATCTGAAGCTGCTACTGACATTGCAAATTCTCTTGCTTCAATGCTTGATAATCAAAATGGTCAAGTCGGAGGTCCTTCAACATCTACTAATGCATCAGAGCGTGATGCAGAAATGGAAAGCGAACTTGCTGAAGAACTAGCACAAGGAGATGCTTTCACTGACTATGACATTGAAGTTACCAAAGAAGGTGAAGCCATAAGTGAGTACTTGGCTCTACTTAATTCCGCAGGAACAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0019222 GO:0019538 GO:0019941 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0060255 GO:0061136 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA ubiquitin

Protein Analysis

587

Amino Acids

64.72

Weight (kDa)

5.2

Isoelectric Point (pI)

41.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G12550
fragaria_vesca	FvH4_1g01990 FvH4_1g01990 FvH4_1g01990 FvH4_3g33700
malus_domestica	MD15G1162100.v1.1
prunus_persica	Prupe.7G257500_v2.0.a1
pyrus_communis	pycom15g14580
rosa_chinensis	RchiOBHm_Chr2g0087051 RchiOBHm_Chr5g0061231
rosa_laevigata	RLG00000015824 RLG00000035444
rosa_multiflora	Rmu_sc0007612.1_g000046 Rmu_sc0010698.1_g000014
rosa_roxburghii	Rroxscaffold_1G00019470 Rroxscaffold_2G00153940
rosa_rugosa	Rorug01G0471700.1 Rorug05G0339000
rosa_samantha	Rh2AG025200 Rh2BG025000 Rh2CG025500 Rh2DG025400 Rh5BG413000 Rh5CG437500
rosa_wichuraiana	Rw0G022890 Rw0G023050 Rw2G002000 Rw5G037700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	397
Acc36I	ACCTGC	1 cut(s)	791
Acc65I	GGTACC	1 cut(s)	1127
AccB1I	GGYRCC	4 cut(s)	145, 934, 1127, 1450
AccII	CGCG	1 cut(s)	413
AciI	CCGC	4 cut(s)	413, 1075, 1093, 1746
AclWI	GGATC	1 cut(s)	614
AcoI	YGGCCR	1 cut(s)	1474
AcsI	RAATTY	2 cut(s)	723, 1546
AcuI	CTGAAG	7 cut(s)	779, 914, 1160, 1230, 1326, 1545, 1671
AfaI	GTAC	4 cut(s)	450, 1129, 1359, 1727
AfiI	CCNNNNNNNGG	4 cut(s)	931, 1074, 1075, 1483
AluBI	AGCT	9 cut(s)	138, 183, 605, 761, 841, 928, 1148, 1352, 1529
AluI	AGCT	9 cut(s)	138, 183, 605, 761, 841, 928, 1148, 1352, 1529
Alw21I	GWGCWC	4 cut(s)	310, 588, 763, 823
Alw26I	GTCTC	8 cut(s)	341, 358, 485, 690, 826, 1027, 1183, 1265
Alw44I	GTGCAC	1 cut(s)	819
AlwI	GGATC	1 cut(s)	614
AlwNI	CAGNNNCTG	1 cut(s)	392
AoxI	GGCC	1 cut(s)	1474
ApaLI	GTGCAC	1 cut(s)	819
ApeKI	GCWGC	8 cut(s)	183, 243, 383, 386, 841, 1205, 1469, 1529
ApoI	RAATTY	2 cut(s)	723, 1546
Asp700I	GAANNNNTTC	1 cut(s)	1215
Asp718I	GGTACC	1 cut(s)	1127
AspLEI	GCGC	2 cut(s)	215, 1326
AspS9I	GGNCC	2 cut(s)	1417, 1592
AsuC2I	CCSGG	1 cut(s)	192
AsuHPI	GGTGA	3 cut(s)	580, 913, 1721
AsuII	TTCGAA	1 cut(s)	1219
AvaII	GGWCC	2 cut(s)	1417, 1592
BaeGI	GKGCMC	1 cut(s)	823
BalI	TGGCCA	1 cut(s)	1476
BanI	GGYRCC	4 cut(s)	145, 934, 1127, 1450
BanII	GRGCYC	3 cut(s)	361, 763, 1069
BarI	GAAGNNNNNNTAC	2 cut(s)	1341, 1373
BauI	CACGAG	1 cut(s)	780
Bbv12I	GWGCWC	4 cut(s)	310, 588, 763, 823
BbvI	GCAGC	8 cut(s)	170, 255, 370, 398, 828, 1192, 1456, 1516
BccI	CCATC	4 cut(s)	73, 334, 410, 508
BceAI	ACGGC	2 cut(s)	250, 256
BcgI	CGANNNNNNTGC	2 cut(s)	165, 199
BclI	TGATCA	1 cut(s)	496
BcnI	CCSGG	1 cut(s)	192
BcoDI	GTCTC	8 cut(s)	341, 358, 485, 690, 826, 1027, 1183, 1265
BfaI	CTAG	2 cut(s)	368, 1658
BfmI	CTRYAG	2 cut(s)	384, 1494
BfoI	RGCGCY	1 cut(s)	1327
BfuAI	ACCTGC	1 cut(s)	791
BisI	GCNGC	9 cut(s)	184, 244, 384, 387, 842, 1094, 1206, 1470, 1530
BlsI	GCNGC	9 cut(s)	185, 245, 385, 388, 843, 1095, 1207, 1471, 1531
BmcAI	AGTACT	2 cut(s)	450, 1727
Bme1390I	CCNGG	1 cut(s)	192
Bme18I	GGWCC	2 cut(s)	1417, 1592
BmgT120I	GGNCC	2 cut(s)	1417, 1592
BmiI	GGNNCC	5 cut(s)	147, 791, 936, 1129, 1452
BmrFI	CCNGG	1 cut(s)	192
BmrI	ACTGGG	1 cut(s)	253
BmsI	GCATC	8 cut(s)	513, 562, 976, 1327, 1492, 1615, 1622, 1660
BmuI	ACTGGG	1 cut(s)	253
BpmI	CTGGAG	2 cut(s)	857, 1009
Bpu10I	CCTNAGC	1 cut(s)	309
Bpu14I	TTCGAA	1 cut(s)	1219
BpuEI	CTTGAG	1 cut(s)	752
BpuMI	CCSGG	1 cut(s)	192
Bsa29I	ATCGAT	1 cut(s)	666
BsaI	GGTCTC	2 cut(s)	1183, 1265
BsaJI	CCNNGG	2 cut(s)	191, 591
BsaXI	ACNNNNNCTCC	2 cut(s)	305, 335
Bsc4I	CCNNNNNNNGG	4 cut(s)	931, 1074, 1075, 1483
Bse1I	ACTGG	6 cut(s)	259, 456, 710, 840, 1026, 1179
Bse3DI	GCAATG	2 cut(s)	422, 1539
BseCI	ATCGAT	1 cut(s)	666
BseDI	CCNNGG	2 cut(s)	191, 591
BseGI	GGATG	3 cut(s)	421, 946, 1011
BseLI	CCNNNNNNNGG	4 cut(s)	931, 1074, 1075, 1483
BseMI	GCAATG	2 cut(s)	422, 1539
BseMII	CTCAG	5 cut(s)	323, 336, 374, 726, 1455
BseNI	ACTGG	6 cut(s)	259, 456, 710, 840, 1026, 1179
BseSI	GKGCMC	1 cut(s)	823
BseXI	GCAGC	8 cut(s)	170, 255, 370, 398, 828, 1192, 1456, 1516
BseYI	CCCAGC	1 cut(s)	924
BsgI	GTGCAG	1 cut(s)	891
Bsh1236I	CGCG	1 cut(s)	413
BshFI	GGCC	1 cut(s)	1476
BshNI	GGYRCC	4 cut(s)	145, 934, 1127, 1450
BshVI	ATCGAT	1 cut(s)	666
BsiHKAI	GWGCWC	4 cut(s)	310, 588, 763, 823
BsiSI	CCGG	3 cut(s)	191, 216, 938
BslFI	GGGAC	3 cut(s)	115, 531, 1423
BslI	CCNNNNNNNGG	4 cut(s)	931, 1074, 1075, 1483
BsmAI	GTCTC	8 cut(s)	341, 358, 485, 690, 826, 1027, 1183, 1265
BsmFI	GGGAC	3 cut(s)	115, 531, 1423
BsnI	GGCC	1 cut(s)	1476
Bso31I	GGTCTC	2 cut(s)	1183, 1265
Bsp119I	TTCGAA	1 cut(s)	1219
Bsp1286I	GDGCHC	6 cut(s)	310, 361, 588, 763, 823, 1069
Bsp143I	GATC	6 cut(s)	176, 198, 457, 496, 619, 1376
Bsp19I	CCATGG	1 cut(s)	591
BspACI	CCGC	4 cut(s)	413, 1075, 1093, 1746
BspANI	GGCC	1 cut(s)	1476
BspCNI	CTCAG	5 cut(s)	322, 337, 373, 725, 1454
BspDI	ATCGAT	1 cut(s)	666
BspFNI	CGCG	1 cut(s)	413
BspHI	TCATGA	1 cut(s)	510
BspLI	GGNNCC	5 cut(s)	147, 791, 936, 1129, 1452
BspMAI	CTGCAG	2 cut(s)	388, 1498
BspMI	ACCTGC	1 cut(s)	791
BspPI	GGATC	1 cut(s)	614
BspT104I	TTCGAA	1 cut(s)	1219
BspT107I	GGYRCC	4 cut(s)	145, 934, 1127, 1450
BspTNI	GGTCTC	2 cut(s)	1183, 1265
BsrDI	GCAATG	2 cut(s)	422, 1539
BsrI	ACTGG	6 cut(s)	259, 456, 710, 840, 1026, 1179
BssECI	CCNNGG	2 cut(s)	191, 591
BssMI	GATC	6 cut(s)	176, 198, 457, 496, 619, 1376
BssSI	CACGAG	1 cut(s)	780
BssT1I	CCWWGG	1 cut(s)	591
Bst2BI	CACGAG	1 cut(s)	780
Bst4CI	ACNGT	3 cut(s)	145, 869, 1238
Bst6I	CTCTTC	2 cut(s)	156, 781
BstAPI	GCANNNNNTGC	4 cut(s)	392, 1337, 1493, 1502
BstBI	TTCGAA	1 cut(s)	1219
BstC8I	GCNNGC	5 cut(s)	188, 295, 411, 819, 1474
BstDEI	CTNAG	6 cut(s)	309, 345, 360, 692, 712, 1441
BstDSI	CCRYGG	1 cut(s)	591
BstF5I	GGATG	3 cut(s)	421, 946, 1011
BstFNI	CGCG	1 cut(s)	413
BstH2I	RGCGCY	1 cut(s)	1327
BstHHI	GCGC	2 cut(s)	215, 1326
BstKTI	GATC	6 cut(s)	179, 201, 460, 499, 622, 1379
BstMAI	GTCTC	8 cut(s)	341, 358, 485, 690, 826, 1027, 1183, 1265
BstMBI	GATC	6 cut(s)	176, 198, 457, 496, 619, 1376
BstMWI	GCNNNNNNNGC	9 cut(s)	243, 392, 934, 995, 1064, 1211, 1337, 1493, 1502
BstSCI	CCNGG	1 cut(s)	190
BstSFI	CTRYAG	2 cut(s)	384, 1494
BstSLI	GKGCMC	1 cut(s)	823
BstUI	CGCG	1 cut(s)	413
BstV1I	GCAGC	8 cut(s)	170, 255, 370, 398, 828, 1192, 1456, 1516
BstXI	CCANNNNNNTGG	1 cut(s)	289
Bsu15I	ATCGAT	1 cut(s)	666
BsuRI	GGCC	1 cut(s)	1476
BsuTUI	ATCGAT	1 cut(s)	666
BtgI	CCRYGG	1 cut(s)	591
BtsCI	GGATG	3 cut(s)	421, 946, 1011
BtsIMutI	CAGTG	5 cut(s)	720, 874, 1033, 1243, 1677
BveI	ACCTGC	1 cut(s)	791
Cac8I	GCNNGC	5 cut(s)	188, 295, 411, 819, 1474
CaiI	CAGNNNCTG	1 cut(s)	392
CciI	TCATGA	1 cut(s)	510
CfoI	GCGC	2 cut(s)	215, 1326
Cfr13I	GGNCC	2 cut(s)	1417, 1592
ClaI	ATCGAT	1 cut(s)	666
Csp6I	GTAC	4 cut(s)	449, 1128, 1358, 1726
CviAII	CATG	6 cut(s)	105, 511, 592, 688, 764, 1363
CviQI	GTAC	4 cut(s)	449, 1128, 1358, 1726
DdeI	CTNAG	6 cut(s)	309, 345, 360, 692, 712, 1441
DpnI	GATC	6 cut(s)	178, 200, 459, 498, 621, 1378
DpnII	GATC	6 cut(s)	176, 198, 457, 496, 619, 1376
DrdI	GACNNNNNNGTC	1 cut(s)	397
DseDI	GACNNNNNNGTC	1 cut(s)	397
EaeI	YGGCCR	1 cut(s)	1474
Eam1104I	CTCTTC	2 cut(s)	156, 781
EarI	CTCTTC	2 cut(s)	156, 781
Ecl136II	GAGCTC	1 cut(s)	761
Eco130I	CCWWGG	1 cut(s)	591
Eco24I	GRGCYC	3 cut(s)	361, 763, 1069
Eco31I	GGTCTC	2 cut(s)	1183, 1265
Eco47I	GGWCC	2 cut(s)	1417, 1592
Eco53kI	GAGCTC	1 cut(s)	761
Eco57I	CTGAAG	7 cut(s)	779, 914, 1160, 1230, 1326, 1545, 1671
EcoICRI	GAGCTC	1 cut(s)	761
EcoO109I	RGGNCCY	1 cut(s)	1592
EcoRI	GAATTC	1 cut(s)	723
EcoT14I	CCWWGG	1 cut(s)	591
EcoT22I	ATGCAT	2 cut(s)	577, 1615
EcoT38I	GRGCYC	3 cut(s)	361, 763, 1069
ErhI	CCWWGG	1 cut(s)	591
FaeI	CATG	6 cut(s)	108, 514, 595, 691, 767, 1366
FaqI	GGGAC	3 cut(s)	115, 531, 1423
FatI	CATG	6 cut(s)	104, 510, 591, 687, 763, 1362
FauI	CCCGC	1 cut(s)	1068
FbaI	TGATCA	1 cut(s)	496
Fnu4HI	GCNGC	9 cut(s)	184, 244, 384, 387, 842, 1094, 1206, 1470, 1530
FokI	GGATG	3 cut(s)	428, 953, 1018
FriOI	GRGCYC	3 cut(s)	361, 763, 1069
Fsp4HI	GCNGC	9 cut(s)	184, 244, 384, 387, 842, 1094, 1206, 1470, 1530
FspBI	CTAG	2 cut(s)	368, 1658
GlaI	GCGC	2 cut(s)	214, 1325
GluI	GCNGC	9 cut(s)	184, 244, 384, 387, 842, 1094, 1206, 1470, 1530
GsaI	CCCAGC	1 cut(s)	928
GsuI	CTGGAG	2 cut(s)	857, 1009
HaeII	RGCGCY	1 cut(s)	1327
HaeIII	GGCC	1 cut(s)	1476
HapII	CCGG	3 cut(s)	191, 216, 938
HhaI	GCGC	2 cut(s)	215, 1326
Hin1II	CATG	6 cut(s)	108, 514, 595, 691, 767, 1366
Hin6I	GCGC	2 cut(s)	213, 1324
HinP1I	GCGC	2 cut(s)	213, 1324
HincII	GTYRAC	4 cut(s)	643, 900, 1048, 1433
HindII	GTYRAC	4 cut(s)	643, 900, 1048, 1433
HindIII	AAGCTT	1 cut(s)	603
HinfI	GANTC	5 cut(s)	286, 375, 773, 944, 1301
HpaII	CCGG	3 cut(s)	191, 216, 938
HphI	GGTGA	3 cut(s)	580, 913, 1721
Hpy166II	GTNNAC	7 cut(s)	643, 821, 872, 900, 921, 1048, 1433
Hpy188I	TCNGA	8 cut(s)	363, 462, 490, 624, 1483, 1525, 1589, 1618
Hpy188III	TCNNGA	7 cut(s)	311, 332, 511, 812, 1016, 1268, 1443
Hpy8I	GTNNAC	7 cut(s)	643, 821, 872, 900, 921, 1048, 1433
Hpy99I	CGWCG	1 cut(s)	242
HpyCH4III	ACNGT	3 cut(s)	145, 869, 1238
HpyF10VI	GCNNNNNNNGC	9 cut(s)	243, 392, 934, 995, 1064, 1211, 1337, 1493, 1502
HpyF3I	CTNAG	6 cut(s)	309, 345, 360, 692, 712, 1441
Hsp92II	CATG	6 cut(s)	108, 514, 595, 691, 767, 1366
HspAI	GCGC	2 cut(s)	213, 1324
KpnI	GGTACC	1 cut(s)	1131
Ksp22I	TGATCA	1 cut(s)	496
Kzo9I	GATC	6 cut(s)	176, 198, 457, 496, 619, 1376
LmnI	GCTCC	3 cut(s)	795, 838, 1111
Lsp1109I	GCAGC	8 cut(s)	170, 255, 370, 398, 828, 1192, 1456, 1516
LweI	GCATC	8 cut(s)	513, 562, 976, 1327, 1492, 1615, 1622, 1660
MaeI	CTAG	2 cut(s)	368, 1658
MaeIII	GTNAC	2 cut(s)	803, 1696
MalI	GATC	6 cut(s)	178, 200, 459, 498, 621, 1378
MboI	GATC	6 cut(s)	176, 198, 457, 496, 619, 1376
MhlI	GDGCHC	6 cut(s)	310, 361, 588, 763, 823, 1069
MlsI	TGGCCA	1 cut(s)	1476
MluNI	TGGCCA	1 cut(s)	1476
MlyI	GAGTC	2 cut(s)	384, 767
MmeI	TCCRAC	3 cut(s)	99, 468, 1567
Mox20I	TGGCCA	1 cut(s)	1476
Mph1103I	ATGCAT	2 cut(s)	577, 1615
MroXI	GAANNNNTTC	1 cut(s)	1215
MscI	TGGCCA	1 cut(s)	1476
MseI	TTAA	3 cut(s)	270, 552, 1740
MslI	CAYNNNNRTG	2 cut(s)	414, 534
Msp20I	TGGCCA	1 cut(s)	1476
MspA1I	CMGCKG	2 cut(s)	138, 1093
MspI	CCGG	3 cut(s)	191, 216, 938
MspR9I	CCNGG	1 cut(s)	192
MvnI	CGCG	1 cut(s)	413
MwoI	GCNNNNNNNGC	9 cut(s)	243, 392, 934, 995, 1064, 1211, 1337, 1493, 1502
NciI	CCSGG	1 cut(s)	192
NcoI	CCATGG	1 cut(s)	591
NdeII	GATC	6 cut(s)	176, 198, 457, 496, 619, 1376
NlaIII	CATG	6 cut(s)	108, 514, 595, 691, 767, 1366
NlaIV	GGNNCC	5 cut(s)	147, 791, 936, 1129, 1452
NmuCI	GTSAC	1 cut(s)	803
NsiI	ATGCAT	2 cut(s)	577, 1615
NspV	TTCGAA	1 cut(s)	1219
PagI	TCATGA	1 cut(s)	510
PdmI	GAANNNNTTC	1 cut(s)	1215
PfeI	GAWTC	3 cut(s)	286, 944, 1301
PkrI	GCNGC	9 cut(s)	185, 245, 385, 388, 843, 1095, 1207, 1471, 1531
PleI	GAGTC	2 cut(s)	383, 767
PpsI	GAGTC	2 cut(s)	383, 767
PpuMI	RGGWCCY	1 cut(s)	1592
Psp124BI	GAGCTC	1 cut(s)	763
Psp5II	RGGWCCY	1 cut(s)	1592
PspFI	CCCAGC	1 cut(s)	924
PspN4I	GGNNCC	5 cut(s)	147, 791, 936, 1129, 1452
PspPI	GGNCC	2 cut(s)	1417, 1592
PspPPI	RGGWCCY	1 cut(s)	1592
PstI	CTGCAG	2 cut(s)	388, 1498
PstNI	CAGNNNCTG	1 cut(s)	392
PvuII	CAGCTG	1 cut(s)	138
RsaI	GTAC	4 cut(s)	450, 1129, 1359, 1727
RsaNI	GTAC	4 cut(s)	449, 1128, 1358, 1726
RseI	CAYNNNNRTG	2 cut(s)	414, 534
SacI	GAGCTC	1 cut(s)	763
SaqAI	TTAA	3 cut(s)	270, 552, 1740
SatI	GCNGC	9 cut(s)	184, 244, 384, 387, 842, 1094, 1206, 1470, 1530
Sau3AI	GATC	6 cut(s)	176, 198, 457, 496, 619, 1376
Sau96I	GGNCC	2 cut(s)	1417, 1592
ScaI	AGTACT	2 cut(s)	450, 1727
SchI	GAGTC	2 cut(s)	384, 767
ScrFI	CCNGG	1 cut(s)	192
SduI	GDGCHC	6 cut(s)	310, 361, 588, 763, 823, 1069
SfaNI	GCATC	8 cut(s)	513, 562, 976, 1327, 1492, 1615, 1622, 1660
SfcI	CTRYAG	2 cut(s)	384, 1494
SfuI	TTCGAA	1 cut(s)	1219
SinI	GGWCC	2 cut(s)	1417, 1592
SmiMI	CAYNNNNRTG	2 cut(s)	414, 534
SmlI	CTYRAG	1 cut(s)	731
SmoI	CTYRAG	1 cut(s)	731
SsiI	CCGC	4 cut(s)	413, 1075, 1093, 1746
SspMI	CTAG	2 cut(s)	368, 1658
SstI	GAGCTC	1 cut(s)	763
StyD4I	CCNGG	1 cut(s)	190
StyI	CCWWGG	1 cut(s)	591
TaaI	ACNGT	3 cut(s)	145, 869, 1238
TaqI	TCGA	4 cut(s)	197, 666, 1219, 1389
TatI	WGTACW	2 cut(s)	448, 1725
TauI	GCSGC	1 cut(s)	1096
TfiI	GAWTC	3 cut(s)	286, 944, 1301
Tru1I	TTAA	3 cut(s)	270, 552, 1740
Tru9I	TTAA	3 cut(s)	270, 552, 1740
TscAI	CASTG	5 cut(s)	720, 874, 1033, 1243, 1684
TseFI	GTSAC	1 cut(s)	803
TseI	GCWGC	8 cut(s)	183, 243, 383, 386, 841, 1205, 1469, 1529
Tsp45I	GTSAC	1 cut(s)	803
TspDTI	ATGAA	7 cut(s)	17, 411, 518, 676, 905, 957, 1116
TspGWI	ACGGA	1 cut(s)	1418
TspRI	CASTG	5 cut(s)	720, 874, 1033, 1243, 1684
VneI	GTGCAC	1 cut(s)	819
VpaK11BI	GGWCC	2 cut(s)	1417, 1592
XapI	RAATTY	2 cut(s)	723, 1546
XmnI	GAANNNNTTC	1 cut(s)	1215
XspI	CTAG	2 cut(s)	368, 1658
ZrmI	AGTACT	2 cut(s)	450, 1727
Zsp2I	ATGCAT	2 cut(s)	577, 1615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.