NEDD8 ultimate buster
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G12550 |
| fragaria_vesca | FvH4_1g01990 FvH4_1g01990 FvH4_1g01990 FvH4_3g33700 |
| malus_domestica | MD15G1162100.v1.1 |
| prunus_persica | Prupe.7G257500_v2.0.a1 |
| pyrus_communis | pycom15g14580 |
| rosa_chinensis | RchiOBHm_Chr2g0087051 RchiOBHm_Chr5g0061231 |
| rosa_laevigata | RLG00000015824 RLG00000035444 |
| rosa_multiflora | Rmu_sc0007612.1_g000046 Rmu_sc0010698.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00019470 Rroxscaffold_2G00153940 |
| rosa_rugosa | Rorug01G0471700.1 Rorug05G0339000 |
| rosa_samantha | Rh2AG025200 Rh2BG025000 Rh2CG025500 Rh2DG025400 Rh5BG413000 Rh5CG437500 |
| rosa_wichuraiana | Rw0G022890 Rw0G023050 Rw2G002000 Rw5G037700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 489 |
| Acc16I | TGCGCA | 1 cut(s) | 136 |
| AccB1I | GGYRCC | 1 cut(s) | 856 |
| AciI | CCGC | 5 cut(s) | 32, 387, 424, 727, 925 |
| AclI | AACGTT | 1 cut(s) | 1467 |
| AclWI | GGATC | 2 cut(s) | 415, 1083 |
| AcoI | YGGCCR | 1 cut(s) | 321 |
| AcsI | RAATTY | 2 cut(s) | 839, 1438 |
| AcuI | CTGAAG | 5 cut(s) | 252, 288, 701, 1152, 1248 |
| AfaI | GTAC | 3 cut(s) | 69, 372, 399 |
| AfeI | AGCGCT | 2 cut(s) | 1137, 1275 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 853, 996, 997 |
| AjnI | CCWGG | 1 cut(s) | 1320 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 386, 418 |
| Alw21I | GWGCWC | 1 cut(s) | 685 |
| Alw26I | GTCTC | 6 cut(s) | 322, 407, 612, 748, 1105, 1512 |
| AlwI | GGATC | 2 cut(s) | 415, 1083 |
| Ama87I | CYCGRG | 1 cut(s) | 294 |
| Aor51HI | AGCGCT | 2 cut(s) | 1137, 1275 |
| AoxI | GGCC | 4 cut(s) | 177, 321, 439, 724 |
| ApeKI | GCWGC | 7 cut(s) | 305, 308, 763, 1127, 1325, 1394, 1421 |
| ApoI | RAATTY | 2 cut(s) | 839, 1438 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1042, 1074 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1008 |
| AspLEI | GCGC | 4 cut(s) | 137, 1138, 1276, 1564 |
| AspS9I | GGNCC | 4 cut(s) | 63, 178, 439, 1493 |
| AsuHPI | GGTGA | 4 cut(s) | 835, 1493, 1520, 1622 |
| AsuII | TTCGAA | 1 cut(s) | 1293 |
| AsuNHI | GCTAGC | 2 cut(s) | 820, 1397 |
| AvaI | CYCGRG | 1 cut(s) | 294 |
| AvaII | GGWCC | 2 cut(s) | 63, 1493 |
| BalI | TGGCCA | 1 cut(s) | 323 |
| BanI | GGYRCC | 1 cut(s) | 856 |
| BanII | GRGCYC | 2 cut(s) | 685, 991 |
| BauI | CACGAG | 1 cut(s) | 702 |
| BbsI | GAAGAC | 2 cut(s) | 276, 363 |
| Bbv12I | GWGCWC | 1 cut(s) | 685 |
| BbvI | GCAGC | 7 cut(s) | 295, 317, 750, 1114, 1312, 1381, 1408 |
| BccI | CCATC | 6 cut(s) | 155, 332, 430, 1333, 1504, 1528 |
| BceAI | ACGGC | 1 cut(s) | 172 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1273, 1307 |
| BciT130I | CCWGG | 1 cut(s) | 1322 |
| BclI | TGATCA | 2 cut(s) | 418, 1471 |
| BcoDI | GTCTC | 6 cut(s) | 322, 407, 612, 748, 1105, 1512 |
| BfaI | CTAG | 4 cut(s) | 216, 821, 1398, 1559 |
| BfmI | CTRYAG | 1 cut(s) | 851 |
| BfoI | RGCGCY | 2 cut(s) | 1139, 1277 |
| BisI | GCNGC | 8 cut(s) | 306, 309, 727, 764, 1128, 1326, 1395, 1422 |
| BlsI | GCNGC | 8 cut(s) | 307, 310, 728, 765, 1129, 1327, 1396, 1423 |
| BmcAI | AGTACT | 1 cut(s) | 372 |
| Bme1390I | CCNGG | 1 cut(s) | 1322 |
| Bme18I | GGWCC | 2 cut(s) | 63, 1493 |
| BmeT110I | CYCGRG | 1 cut(s) | 294 |
| BmgT120I | GGNCC | 4 cut(s) | 63, 178, 439, 1493 |
| BmiI | GGNNCC | 1 cut(s) | 858 |
| BmrFI | CCNGG | 1 cut(s) | 1322 |
| BmsI | GCATC | 6 cut(s) | 435, 484, 898, 1363, 1516, 1561 |
| BmtI | GCTAGC | 2 cut(s) | 824, 1401 |
| BpiI | GAAGAC | 2 cut(s) | 276, 363 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 101, 133, 515, 547 |
| BpmI | CTGGAG | 4 cut(s) | 62, 779, 1064, 1572 |
| Bpu14I | TTCGAA | 1 cut(s) | 1293 |
| BpuEI | CTTGAG | 1 cut(s) | 674 |
| Bsa29I | ATCGAT | 1 cut(s) | 588 |
| BsaI | GGTCTC | 2 cut(s) | 1105, 1512 |
| BsaJI | CCNNGG | 1 cut(s) | 513 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 853, 996, 997 |
| Bse1I | ACTGG | 2 cut(s) | 294, 762 |
| Bse3DI | GCAATG | 3 cut(s) | 344, 920, 1431 |
| BseBI | CCWGG | 1 cut(s) | 1322 |
| BseCI | ATCGAT | 1 cut(s) | 588 |
| BseDI | CCNNGG | 1 cut(s) | 513 |
| BseGI | GGATG | 1 cut(s) | 1180 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 853, 996, 997 |
| BseMI | GCAATG | 3 cut(s) | 344, 920, 1431 |
| BseMII | CTCAG | 5 cut(s) | 402, 648, 1152, 1380, 1521 |
| BseNI | ACTGG | 2 cut(s) | 294, 762 |
| BseRI | GAGGAG | 2 cut(s) | 269, 536 |
| BseXI | GCAGC | 7 cut(s) | 295, 317, 750, 1114, 1312, 1381, 1408 |
| BseYI | CCCAGC | 2 cut(s) | 846, 1328 |
| BsgI | GTGCAG | 1 cut(s) | 813 |
| BshFI | GGCC | 4 cut(s) | 179, 323, 441, 726 |
| BshNI | GGYRCC | 1 cut(s) | 856 |
| BshVI | ATCGAT | 1 cut(s) | 588 |
| BsiHKAI | GWGCWC | 1 cut(s) | 685 |
| BsiHKCI | CYCGRG | 1 cut(s) | 294 |
| BslFI | GGGAC | 2 cut(s) | 37, 1063 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 853, 996, 997 |
| BsmAI | GTCTC | 6 cut(s) | 322, 407, 612, 748, 1105, 1512 |
| BsmFI | GGGAC | 2 cut(s) | 37, 1063 |
| BsnI | GGCC | 4 cut(s) | 179, 323, 441, 726 |
| Bso31I | GGTCTC | 2 cut(s) | 1105, 1512 |
| BsoBI | CYCGRG | 1 cut(s) | 294 |
| Bsp119I | TTCGAA | 1 cut(s) | 1293 |
| Bsp1286I | GDGCHC | 2 cut(s) | 685, 991 |
| Bsp143I | GATC | 7 cut(s) | 98, 379, 407, 418, 1075, 1298, 1471 |
| Bsp19I | CCATGG | 1 cut(s) | 513 |
| BspACI | CCGC | 5 cut(s) | 32, 387, 424, 727, 925 |
| BspANI | GGCC | 4 cut(s) | 179, 323, 441, 726 |
| BspCNI | CTCAG | 5 cut(s) | 403, 647, 1153, 1379, 1522 |
| BspDI | ATCGAT | 1 cut(s) | 588 |
| BspHI | TCATGA | 1 cut(s) | 432 |
| BspLI | GGNNCC | 1 cut(s) | 858 |
| BspOI | GCTAGC | 2 cut(s) | 824, 1401 |
| BspPI | GGATC | 2 cut(s) | 415, 1083 |
| BspT104I | TTCGAA | 1 cut(s) | 1293 |
| BspT107I | GGYRCC | 1 cut(s) | 856 |
| BspTNI | GGTCTC | 2 cut(s) | 1105, 1512 |
| BsrDI | GCAATG | 3 cut(s) | 344, 920, 1431 |
| BsrI | ACTGG | 2 cut(s) | 294, 762 |
| BssECI | CCNNGG | 1 cut(s) | 513 |
| BssMI | GATC | 7 cut(s) | 98, 379, 407, 418, 1075, 1298, 1471 |
| BssSI | CACGAG | 1 cut(s) | 702 |
| BssT1I | CCWWGG | 1 cut(s) | 513 |
| Bst2BI | CACGAG | 1 cut(s) | 702 |
| Bst2UI | CCWGG | 1 cut(s) | 1322 |
| Bst4CI | ACNGT | 5 cut(s) | 67, 107, 402, 791, 1523 |
| Bst6I | CTCTTC | 4 cut(s) | 78, 136, 228, 703 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1351, 1360 |
| BstBI | TTCGAA | 1 cut(s) | 1293 |
| BstDEI | CTNAG | 7 cut(s) | 411, 634, 981, 1139, 1161, 1366, 1530 |
| BstDSI | CCRYGG | 1 cut(s) | 513 |
| BstF5I | GGATG | 1 cut(s) | 1180 |
| BstH2I | RGCGCY | 2 cut(s) | 1139, 1277 |
| BstHHI | GCGC | 4 cut(s) | 137, 1138, 1276, 1564 |
| BstKTI | GATC | 7 cut(s) | 101, 382, 410, 421, 1078, 1301, 1474 |
| BstMAI | GTCTC | 6 cut(s) | 322, 407, 612, 748, 1105, 1512 |
| BstMBI | GATC | 7 cut(s) | 98, 379, 407, 418, 1075, 1298, 1471 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 314, 856, 917, 986, 1133, 1166, 1322, 1351, 1360 |
| BstNI | CCWGG | 1 cut(s) | 1322 |
| BstNSI | RCATGY | 1 cut(s) | 335 |
| BstSCI | CCNGG | 1 cut(s) | 1320 |
| BstSFI | CTRYAG | 1 cut(s) | 851 |
| BstV1I | GCAGC | 7 cut(s) | 295, 317, 750, 1114, 1312, 1381, 1408 |
| BstV2I | GAAGAC | 2 cut(s) | 276, 363 |
| BstX2I | RGATCY | 2 cut(s) | 407, 1075 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 319, 1328 |
| BstYI | RGATCY | 2 cut(s) | 407, 1075 |
| Bsu15I | ATCGAT | 1 cut(s) | 588 |
| BsuRI | GGCC | 4 cut(s) | 179, 323, 441, 726 |
| BsuTUI | ATCGAT | 1 cut(s) | 588 |
| BtgI | CCRYGG | 1 cut(s) | 513 |
| BtgZI | GCGATG | 1 cut(s) | 174 |
| BtsCI | GGATG | 1 cut(s) | 1180 |
| BtsI | GCAGTG | 1 cut(s) | 312 |
| BtsIMutI | CAGTG | 3 cut(s) | 312, 642, 796 |
| CciI | TCATGA | 1 cut(s) | 432 |
| CfoI | GCGC | 4 cut(s) | 137, 1138, 1276, 1564 |
| Cfr13I | GGNCC | 4 cut(s) | 63, 178, 439, 1493 |
| ClaI | ATCGAT | 1 cut(s) | 588 |
| CseI | GACGC | 2 cut(s) | 1166, 1427 |
| Csp6I | GTAC | 3 cut(s) | 68, 371, 398 |
| CviAII | CATG | 9 cut(s) | 27, 73, 332, 433, 514, 610, 686, 889, 1285 |
| CviQI | GTAC | 3 cut(s) | 68, 371, 398 |
| DdeI | CTNAG | 7 cut(s) | 411, 634, 981, 1139, 1161, 1366, 1530 |
| DpnI | GATC | 7 cut(s) | 100, 381, 409, 420, 1077, 1300, 1473 |
| DpnII | GATC | 7 cut(s) | 98, 379, 407, 418, 1075, 1298, 1471 |
| EaeI | YGGCCR | 1 cut(s) | 321 |
| Eam1104I | CTCTTC | 4 cut(s) | 78, 136, 228, 703 |
| EarI | CTCTTC | 4 cut(s) | 78, 136, 228, 703 |
| Ecl136II | GAGCTC | 1 cut(s) | 683 |
| Eco130I | CCWWGG | 1 cut(s) | 513 |
| Eco24I | GRGCYC | 2 cut(s) | 685, 991 |
| Eco31I | GGTCTC | 2 cut(s) | 1105, 1512 |
| Eco47I | GGWCC | 2 cut(s) | 63, 1493 |
| Eco47III | AGCGCT | 2 cut(s) | 1137, 1275 |
| Eco53kI | GAGCTC | 1 cut(s) | 683 |
| Eco57I | CTGAAG | 5 cut(s) | 252, 288, 701, 1152, 1248 |
| Eco88I | CYCGRG | 1 cut(s) | 294 |
| EcoICRI | GAGCTC | 1 cut(s) | 683 |
| EcoRII | CCWGG | 1 cut(s) | 1320 |
| EcoT14I | CCWWGG | 1 cut(s) | 513 |
| EcoT22I | ATGCAT | 1 cut(s) | 499 |
| EcoT38I | GRGCYC | 2 cut(s) | 685, 991 |
| ErhI | CCWWGG | 1 cut(s) | 513 |
| FaeI | CATG | 9 cut(s) | 30, 76, 335, 436, 517, 613, 689, 892, 1288 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1530, 1562 |
| FaqI | GGGAC | 2 cut(s) | 37, 1063 |
| FatI | CATG | 9 cut(s) | 26, 72, 331, 432, 513, 609, 685, 888, 1284 |
| FauI | CCCGC | 2 cut(s) | 25, 417 |
| FbaI | TGATCA | 2 cut(s) | 418, 1471 |
| Fnu4HI | GCNGC | 8 cut(s) | 306, 309, 727, 764, 1128, 1326, 1395, 1422 |
| FokI | GGATG | 1 cut(s) | 1187 |
| FriOI | GRGCYC | 2 cut(s) | 685, 991 |
| Fsp4HI | GCNGC | 8 cut(s) | 306, 309, 727, 764, 1128, 1326, 1395, 1422 |
| FspBI | CTAG | 4 cut(s) | 216, 821, 1398, 1559 |
| FspI | TGCGCA | 1 cut(s) | 136 |
| GlaI | GCGC | 4 cut(s) | 136, 1137, 1275, 1563 |
| GluI | GCNGC | 8 cut(s) | 306, 309, 727, 764, 1128, 1326, 1395, 1422 |
| GsaI | CCCAGC | 2 cut(s) | 850, 1332 |
| GsuI | CTGGAG | 4 cut(s) | 62, 779, 1064, 1572 |
| HaeII | RGCGCY | 2 cut(s) | 1139, 1277 |
| HaeIII | GGCC | 4 cut(s) | 179, 323, 441, 726 |
| HgaI | GACGC | 2 cut(s) | 1166, 1427 |
| HhaI | GCGC | 4 cut(s) | 137, 1138, 1276, 1564 |
| Hin1II | CATG | 9 cut(s) | 30, 76, 335, 436, 517, 613, 689, 892, 1288 |
| Hin6I | GCGC | 4 cut(s) | 135, 1136, 1274, 1562 |
| HinP1I | GCGC | 4 cut(s) | 135, 1136, 1274, 1562 |
| HincII | GTYRAC | 1 cut(s) | 565 |
| HindII | GTYRAC | 1 cut(s) | 565 |
| HindIII | AAGCTT | 1 cut(s) | 1314 |
| HinfI | GANTC | 8 cut(s) | 144, 208, 297, 695, 711, 1090, 1223, 1643 |
| HphI | GGTGA | 4 cut(s) | 835, 1493, 1520, 1622 |
| Hpy166II | GTNNAC | 1 cut(s) | 565 |
| Hpy188I | TCNGA | 6 cut(s) | 412, 541, 617, 710, 1369, 1582 |
| Hpy188III | TCNNGA | 8 cut(s) | 148, 193, 433, 938, 1081, 1190, 1302, 1411 |
| Hpy8I | GTNNAC | 1 cut(s) | 565 |
| HpyCH4III | ACNGT | 5 cut(s) | 67, 107, 402, 791, 1523 |
| HpyCH4IV | ACGT | 1 cut(s) | 1467 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 314, 856, 917, 986, 1133, 1166, 1322, 1351, 1360 |
| HpyF3I | CTNAG | 7 cut(s) | 411, 634, 981, 1139, 1161, 1366, 1530 |
| HpySE526I | ACGT | 1 cut(s) | 1467 |
| Hsp92II | CATG | 9 cut(s) | 30, 76, 335, 436, 517, 613, 689, 892, 1288 |
| HspAI | GCGC | 4 cut(s) | 135, 1136, 1274, 1562 |
| Ksp22I | TGATCA | 2 cut(s) | 418, 1471 |
| Kzo9I | GATC | 7 cut(s) | 98, 379, 407, 418, 1075, 1298, 1471 |
| LmnI | GCTCC | 5 cut(s) | 618, 760, 1033, 1120, 1342 |
| Lsp1109I | GCAGC | 7 cut(s) | 295, 317, 750, 1114, 1312, 1381, 1408 |
| LweI | GCATC | 6 cut(s) | 435, 484, 898, 1363, 1516, 1561 |
| MaeI | CTAG | 4 cut(s) | 216, 821, 1398, 1559 |
| MaeII | ACGT | 1 cut(s) | 1467 |
| MaeIII | GTNAC | 1 cut(s) | 1597 |
| MalI | GATC | 7 cut(s) | 100, 381, 409, 420, 1077, 1300, 1473 |
| MboI | GATC | 7 cut(s) | 98, 379, 407, 418, 1075, 1298, 1471 |
| MfeI | CAATTG | 2 cut(s) | 182, 1094 |
| MflI | RGATCY | 2 cut(s) | 407, 1075 |
| MhlI | GDGCHC | 2 cut(s) | 685, 991 |
| MlsI | TGGCCA | 1 cut(s) | 323 |
| MluNI | TGGCCA | 1 cut(s) | 323 |
| MlyI | GAGTC | 6 cut(s) | 153, 306, 689, 705, 1232, 1637 |
| MmeI | TCCRAC | 1 cut(s) | 1468 |
| Mox20I | TGGCCA | 1 cut(s) | 323 |
| Mph1103I | ATGCAT | 1 cut(s) | 499 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1008 |
| MscI | TGGCCA | 1 cut(s) | 323 |
| MseI | TTAA | 2 cut(s) | 474, 1257 |
| MslI | CAYNNNNRTG | 2 cut(s) | 336, 456 |
| Msp20I | TGGCCA | 1 cut(s) | 323 |
| MspA1I | CMGCKG | 3 cut(s) | 308, 424, 627 |
| MspR9I | CCNGG | 1 cut(s) | 1322 |
| MunI | CAATTG | 2 cut(s) | 182, 1094 |
| MvaI | CCWGG | 1 cut(s) | 1322 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 314, 856, 917, 986, 1133, 1166, 1322, 1351, 1360 |
| NcoI | CCATGG | 1 cut(s) | 513 |
| NdeII | GATC | 7 cut(s) | 98, 379, 407, 418, 1075, 1298, 1471 |
| NheI | GCTAGC | 2 cut(s) | 820, 1397 |
| NlaIII | CATG | 9 cut(s) | 30, 76, 335, 436, 517, 613, 689, 892, 1288 |
| NlaIV | GGNNCC | 1 cut(s) | 858 |
| NmeAIII | GCCGAG | 1 cut(s) | 1625 |
| NsbI | TGCGCA | 1 cut(s) | 136 |
| NsiI | ATGCAT | 1 cut(s) | 499 |
| NspI | RCATGY | 1 cut(s) | 335 |
| NspV | TTCGAA | 1 cut(s) | 1293 |
| PaeR7I | CTCGAG | 1 cut(s) | 294 |
| PagI | TCATGA | 1 cut(s) | 432 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1008 |
| PfeI | GAWTC | 2 cut(s) | 208, 1090 |
| PkrI | GCNGC | 8 cut(s) | 307, 310, 728, 765, 1129, 1327, 1396, 1423 |
| PleI | GAGTC | 6 cut(s) | 152, 305, 689, 705, 1231, 1637 |
| PpsI | GAGTC | 6 cut(s) | 152, 305, 689, 705, 1231, 1637 |
| PsiI | TTATAA | 1 cut(s) | 489 |
| Psp124BI | GAGCTC | 1 cut(s) | 685 |
| Psp1406I | AACGTT | 1 cut(s) | 1467 |
| Psp6I | CCWGG | 1 cut(s) | 1320 |
| PspFI | CCCAGC | 2 cut(s) | 846, 1328 |
| PspGI | CCWGG | 1 cut(s) | 1320 |
| PspN4I | GGNNCC | 1 cut(s) | 858 |
| PspPI | GGNCC | 4 cut(s) | 63, 178, 439, 1493 |
| PspXI | VCTCGAGB | 1 cut(s) | 294 |
| PsuI | RGATCY | 2 cut(s) | 407, 1075 |
| PvuII | CAGCTG | 2 cut(s) | 308, 627 |
| RsaI | GTAC | 3 cut(s) | 69, 372, 399 |
| RsaNI | GTAC | 3 cut(s) | 68, 371, 398 |
| RseI | CAYNNNNRTG | 2 cut(s) | 336, 456 |
| SacI | GAGCTC | 1 cut(s) | 685 |
| SaqAI | TTAA | 2 cut(s) | 474, 1257 |
| SatI | GCNGC | 8 cut(s) | 306, 309, 727, 764, 1128, 1326, 1395, 1422 |
| Sau3AI | GATC | 7 cut(s) | 98, 379, 407, 418, 1075, 1298, 1471 |
| Sau96I | GGNCC | 4 cut(s) | 63, 178, 439, 1493 |
| ScaI | AGTACT | 1 cut(s) | 372 |
| SchI | GAGTC | 6 cut(s) | 153, 306, 689, 705, 1232, 1637 |
| ScrFI | CCNGG | 1 cut(s) | 1322 |
| SduI | GDGCHC | 2 cut(s) | 685, 991 |
| SfaNI | GCATC | 6 cut(s) | 435, 484, 898, 1363, 1516, 1561 |
| SfcI | CTRYAG | 1 cut(s) | 851 |
| Sfr274I | CTCGAG | 1 cut(s) | 294 |
| SfuI | TTCGAA | 1 cut(s) | 1293 |
| SinI | GGWCC | 2 cut(s) | 63, 1493 |
| SlaI | CTCGAG | 1 cut(s) | 294 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 336, 456 |
| SmlI | CTYRAG | 2 cut(s) | 294, 653 |
| SmoI | CTYRAG | 2 cut(s) | 294, 653 |
| SsiI | CCGC | 5 cut(s) | 32, 387, 424, 727, 925 |
| SspMI | CTAG | 4 cut(s) | 216, 821, 1398, 1559 |
| SstI | GAGCTC | 1 cut(s) | 685 |
| StyD4I | CCNGG | 1 cut(s) | 1320 |
| StyI | CCWWGG | 1 cut(s) | 513 |
| TaaI | ACNGT | 5 cut(s) | 67, 107, 402, 791, 1523 |
| TaiI | ACGT | 1 cut(s) | 1470 |
| TaqI | TCGA | 3 cut(s) | 295, 588, 1293 |
| TatI | WGTACW | 2 cut(s) | 370, 397 |
| TauI | GCSGC | 1 cut(s) | 729 |
| TfiI | GAWTC | 2 cut(s) | 208, 1090 |
| Tru1I | TTAA | 2 cut(s) | 474, 1257 |
| Tru9I | TTAA | 2 cut(s) | 474, 1257 |
| TscAI | CASTG | 3 cut(s) | 319, 642, 796 |
| TseI | GCWGC | 7 cut(s) | 305, 308, 763, 1127, 1325, 1394, 1421 |
| TspDTI | ATGAA | 6 cut(s) | 333, 440, 598, 879, 1038, 1557 |
| TspRI | CASTG | 3 cut(s) | 319, 642, 796 |
| VpaK11BI | GGWCC | 2 cut(s) | 63, 1493 |
| XapI | RAATTY | 2 cut(s) | 839, 1438 |
| XceI | RCATGY | 1 cut(s) | 335 |
| XhoI | CTCGAG | 1 cut(s) | 294 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1008 |
| XspI | CTAG | 4 cut(s) | 216, 821, 1398, 1559 |
| ZrmI | AGTACT | 1 cut(s) | 372 |
| Zsp2I | ATGCAT | 1 cut(s) | 499 |