Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0005734

Physical Location & Seq

Genomic Coordinates Forward (+)

66977465 .. 66979180

Gene Structure 1716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG413000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGCGAAAGTAAAAATTGCAGGGGCATGGGCGGGCGAGCTAGAAGTCGACTTGGACAATTGGACAGTATCAATGCTGAGACAAGAGGTTGCAAAGCGATCGAACTGCGAGCCCAACTCGATCAATCTGATCTGCGCAGGCAAAGTATTGAAGGATGGAGATGGGAGCGAGAATTTGACCCAATTAGGTATTAAGAACAACTCTAAGGTTCTTGCTAGTAGGGTTAGTGCTCAGGAGGGCAAGTCTTTGGGTGAGGAGTTGTTGGCCGAAGGCGAACGCTCTCGGAGATTGGCTCGAATCAAGGCAGCTGCGACTGCAATGGCCAAGAGACATGCAGATGGTTCATTGCCAATTGAAGACTTCAATATAGAACTTGAAGATCAAAGCGGAAAGAAAGTAAAGATGGGAACCGAGACTGATCAGCAGGCAATCATGATAGGTCTGATGCTTCATACAGATGCAAAGAAACTGATTAAAGAACAGAATTATAAAGATGGATTGGAGGTGTTGAGCATGGGAGAGGAGGCCTTCTCTCTATGCGACCCCAAGGTTATTGAGCTGGTTGACAATCCTTCTATACTGCAAATTGATATGGTTTGGTGTTATTTCATGCTCAGAGACATCAACCGTCTCTCGGTGGCGGGAGTTCGGCTTGAGAAGGCTAGAGAAGGACTCGAAAGAGCTCACGGGAAGGATGCTTCTCGTGTGAGACTGATTCAGGCAGGTAGGTATCCGGAGCGTGCACTACATTTGAGACTGGAGCTGCTTGAAGGGGTGGTGGCGTATCATAGTGGTGAGGCTGACAAATCTAAGAAGGTTCTGACTTCTGCCCAAGAAAAGTTCAGGCTGCTACAAGTGTCGGATGAATCTCTTTCACTAGTGATGAGCATGGGATTTAAAGAACTAGATGCAAAAAGGGCTTTGCGGATGAGCAATCAAGATGTTTCCAGTGCCGCTGATTTTCTTGTTGAGCAAAAGGCAAAGAGAGACCAAAAACGGGAAGATGATATCCGGCGGCAACATGAAATTAAGGAGCAAAAGACATATGGTGTGACACCCCTGAAGAAAGCTGTGGATTTGGAGAGATTGAATGAATTGGTCTTCATTGGGTTCCAGAAAGAGCTTGCTGCTGAAGCGCTTAGAAGAAATGAGAATGACAGTGAGAAGGCATTAGATGATTTGACAAATCCAGAAACTAATTCTTCCATACAAGAACAACTTGAATCAAGGAAAAGGAAACGTCAGCGCCGAGCAGTAGATGCTTCAGTTGAAGCACTTGTACGCATGGGCTTTGAAAGATCATTAGTATACGAAGCTTTGCAGGCTGGAGGGACAATGGATGAAGTAATCCATCGATTACTCTCGGTACAAGCATCAAATCCAACAAATGGTGTTAGCCAATCAGCGGCAATCTCCACAGTTTCTGATAACAACAATAGCCAATCTGATGCTGCTAGTGACATTGCGAATTCTCTTGCTTCAATGCTTGAGAATCAAAATGATCAAGCCGGCAGCTCTAGTAATGCGTCAGAGCTTCAGAATCAAAATGATCAAGCTGGAAGTTCTAGTAATGCATCAGAGCGTGATGCAGAAATGGAGAGTGAACTTGCTGAAGAACTGGCACAACAAGACGCTCTCTCTGACTATGACCTTGAAGTTACCAAAGAAGGTGAAGCCATAGCCAAGTACTTGGTTCTTCTGGATTCAGCACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0019222 GO:0019538 GO:0019941 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0060255 GO:0061136 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA ubiquitin

Protein Analysis

571

Amino Acids

63.13

Weight (kDa)

5.09

Isoelectric Point (pI)

41.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_7	PF22562	291 - 325	8.5e-06	UBA-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G12550
fragaria_vesca	FvH4_1g01990 FvH4_1g01990 FvH4_1g01990 FvH4_3g33700
malus_domestica	MD15G1162100.v1.1
prunus_persica	Prupe.7G257500_v2.0.a1
pyrus_communis	pycom15g14580
rosa_chinensis	RchiOBHm_Chr2g0087051 RchiOBHm_Chr5g0061231
rosa_laevigata	RLG00000015824 RLG00000035444
rosa_multiflora	Rmu_sc0007612.1_g000046 Rmu_sc0010698.1_g000014
rosa_roxburghii	Rroxscaffold_1G00019470 Rroxscaffold_2G00153940
rosa_rugosa	Rorug01G0471700.1 Rorug05G0339000
rosa_samantha	Rh2AG025200 Rh2BG025000 Rh2CG025500 Rh2DG025400 Rh5BG413000 Rh5CG437500
rosa_wichuraiana	Rw0G022890 Rw0G023050 Rw2G002000 Rw5G037700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	489
Acc16I	TGCGCA	1 cut(s)	136
Acc36I	ACCTGC	1 cut(s)	713
AccB7I	CCANNNNNTGG	1 cut(s)	1388
AccI	GTMKAC	2 cut(s)	48, 1308
AccIII	TCCGGA	1 cut(s)	733
AciI	CCGC	7 cut(s)	32, 387, 641, 925, 954, 1015, 1406
AcoI	YGGCCR	2 cut(s)	264, 321
AcsI	RAATTY	2 cut(s)	172, 1468
AcuI	CTGAAG	5 cut(s)	1082, 1152, 1248, 1520, 1632
AfaI	GTAC	3 cut(s)	1281, 1368, 1688
AfeI	AGCGCT	1 cut(s)	1137
AfiI	CCNNNNNNNGG	4 cut(s)	634, 997, 1388, 1405
AhlI	ACTAGT	1 cut(s)	877
Alw21I	GWGCWC	3 cut(s)	232, 685, 745
Alw26I	GTCTC	8 cut(s)	73, 322, 407, 612, 635, 703, 748, 981
Alw44I	GTGCAC	1 cut(s)	741
AlwNI	CAGNNNCTG	1 cut(s)	1424
Aor13HI	TCCGGA	1 cut(s)	733
Aor51HI	AGCGCT	1 cut(s)	1137
AoxI	GGCC	3 cut(s)	264, 321, 525
ApaLI	GTGCAC	1 cut(s)	741
ApeKI	GCWGC	7 cut(s)	305, 308, 763, 847, 1127, 1451, 1512
ApoI	RAATTY	2 cut(s)	172, 1468
AspLEI	GCGC	3 cut(s)	137, 1138, 1248
AsuHPI	GGTGA	3 cut(s)	263, 806, 1682
BaeGI	GKGCMC	1 cut(s)	745
BalI	TGGCCA	1 cut(s)	323
BanII	GRGCYC	2 cut(s)	114, 685
BarI	GAAGNNNNNNTAC	2 cut(s)	1263, 1295
BauI	CACGAG	1 cut(s)	702
BbsI	GAAGAC	2 cut(s)	363, 1093
Bbv12I	GWGCWC	3 cut(s)	232, 685, 745
BbvI	GCAGC	7 cut(s)	295, 317, 750, 834, 1114, 1438, 1524
BccI	CCATC	6 cut(s)	149, 155, 332, 397, 488, 1359
BcgI	CGANNNNNNTGC	4 cut(s)	81, 87, 115, 121
BciVI	GTATCC	1 cut(s)	741
BclI	TGATCA	3 cut(s)	418, 1501, 1549
BcoDI	GTCTC	8 cut(s)	73, 322, 407, 612, 635, 703, 748, 981
BcuI	ACTAGT	1 cut(s)	877
BfaI	CTAG	8 cut(s)	41, 216, 663, 878, 905, 1455, 1518, 1566
BfoI	RGCGCY	2 cut(s)	1139, 1249
BfuAI	ACCTGC	1 cut(s)	713
BfuI	GTATCC	1 cut(s)	741
BmcAI	AGTACT	1 cut(s)	1688
BmiI	GGNNCC	2 cut(s)	409, 1112
BmsI	GCATC	9 cut(s)	435, 448, 685, 898, 1249, 1382, 1438, 1576, 1583
BpiI	GAAGAC	2 cut(s)	363, 1093
BplI	GAGNNNNNCTC	8 cut(s)	101, 133, 277, 309, 515, 547, 657, 689
BpmI	CTGGAG	2 cut(s)	779, 1347
Bpu10I	CCTNAGC	1 cut(s)	231
BpuEI	CTTGAG	2 cut(s)	674, 1508
Bsa29I	ATCGAT	1 cut(s)	1354
BsaI	GGTCTC	1 cut(s)	981
BsaJI	CCNNGG	1 cut(s)	546
BsaWI	WCCGGW	1 cut(s)	733
BsaXI	ACNNNNNCTCC	2 cut(s)	227, 257
Bsc4I	CCNNNNNNNGG	4 cut(s)	634, 997, 1388, 1405
Bse118I	RCCGGY	1 cut(s)	1508
Bse1I	ACTGG	3 cut(s)	762, 948, 1623
Bse3DI	GCAATG	3 cut(s)	324, 344, 1461
BseAI	TCCGGA	1 cut(s)	733
BseCI	ATCGAT	1 cut(s)	1354
BseDI	CCNNGG	1 cut(s)	546
BseGI	GGATG	5 cut(s)	160, 700, 868, 933, 1345
BseLI	CCNNNNNNNGG	4 cut(s)	634, 997, 1388, 1405
BseMI	GCAATG	3 cut(s)	324, 344, 1461
BseMII	CTCAG	3 cut(s)	68, 245, 628
BseNI	ACTGG	3 cut(s)	762, 948, 1623
BseRI	GAGGAG	2 cut(s)	269, 536
BseSI	GKGCMC	1 cut(s)	745
BseXI	GCAGC	7 cut(s)	295, 317, 750, 834, 1114, 1438, 1524
Bsh1285I	CGRYCG	1 cut(s)	101
BshFI	GGCC	3 cut(s)	266, 323, 527
BshVI	ATCGAT	1 cut(s)	1354
BsiEI	CGRYCG	1 cut(s)	101
BsiHKAI	GWGCWC	3 cut(s)	232, 685, 745
BsiSI	CCGG	3 cut(s)	734, 1012, 1509
BslFI	GGGAC	1 cut(s)	1345
BslI	CCNNNNNNNGG	4 cut(s)	634, 997, 1388, 1405
BsmAI	GTCTC	8 cut(s)	73, 322, 407, 612, 635, 703, 748, 981
BsmBI	CGTCTC	1 cut(s)	635
BsmFI	GGGAC	1 cut(s)	1345
BsnI	GGCC	3 cut(s)	266, 323, 527
Bso31I	GGTCTC	1 cut(s)	981
Bsp1286I	GDGCHC	4 cut(s)	114, 232, 685, 745
Bsp13I	TCCGGA	1 cut(s)	733
Bsp143I	GATC	8 cut(s)	98, 120, 129, 379, 418, 1298, 1501, 1549
BspACI	CCGC	7 cut(s)	32, 387, 641, 925, 954, 1015, 1406
BspANI	GGCC	3 cut(s)	266, 323, 527
BspCNI	CTCAG	3 cut(s)	69, 244, 627
BspDI	ATCGAT	1 cut(s)	1354
BspEI	TCCGGA	1 cut(s)	733
BspHI	TCATGA	1 cut(s)	432
BspLI	GGNNCC	2 cut(s)	409, 1112
BspMI	ACCTGC	1 cut(s)	713
BspTNI	GGTCTC	1 cut(s)	981
BsrDI	GCAATG	3 cut(s)	324, 344, 1461
BsrFI	RCCGGY	1 cut(s)	1508
BsrI	ACTGG	3 cut(s)	762, 948, 1623
BssAI	RCCGGY	1 cut(s)	1508
BssECI	CCNNGG	1 cut(s)	546
BssMI	GATC	8 cut(s)	98, 120, 129, 379, 418, 1298, 1501, 1549
BssNAI	GTATAC	1 cut(s)	1309
BssSI	CACGAG	1 cut(s)	702
BssT1I	CCWWGG	1 cut(s)	546
Bst1107I	GTATAC	1 cut(s)	1309
Bst2BI	CACGAG	1 cut(s)	702
Bst4CI	ACNGT	5 cut(s)	67, 629, 1160, 1420, 1713
BstAPI	GCANNNNNTGC	1 cut(s)	1259
BstC8I	GCNNGC	9 cut(s)	34, 38, 110, 139, 426, 741, 1125, 1323, 1510
BstDEI	CTNAG	6 cut(s)	77, 204, 231, 614, 810, 1139
BstF5I	GGATG	5 cut(s)	160, 700, 868, 933, 1345
BstH2I	RGCGCY	2 cut(s)	1139, 1249
BstHHI	GCGC	3 cut(s)	137, 1138, 1248
BstKTI	GATC	8 cut(s)	101, 123, 132, 382, 421, 1301, 1504, 1552
BstMAI	GTCTC	8 cut(s)	73, 322, 407, 612, 635, 703, 748, 981
BstMBI	GATC	8 cut(s)	98, 120, 129, 379, 418, 1298, 1501, 1549
BstMCI	CGRYCG	1 cut(s)	101
BstMWI	GCNNNNNNNGC	5 cut(s)	314, 917, 1133, 1259, 1322
BstNSI	RCATGY	1 cut(s)	335
BstSLI	GKGCMC	1 cut(s)	745
BstV1I	GCAGC	7 cut(s)	295, 317, 750, 834, 1114, 1438, 1524
BstV2I	GAAGAC	2 cut(s)	363, 1093
BstXI	CCANNNNNNTGG	1 cut(s)	1690
BstZ17I	GTATAC	1 cut(s)	1309
Bsu15I	ATCGAT	1 cut(s)	1354
BsuI	GTATCC	1 cut(s)	741
BsuRI	GGCC	3 cut(s)	266, 323, 527
BsuTUI	ATCGAT	1 cut(s)	1354
BtsCI	GGATG	5 cut(s)	160, 700, 868, 933, 1345
BtsIMutI	CAGTG	2 cut(s)	955, 1165
BveI	ACCTGC	1 cut(s)	713
Cac8I	GCNNGC	9 cut(s)	34, 38, 110, 139, 426, 741, 1125, 1323, 1510
CaiI	CAGNNNCTG	1 cut(s)	1424
CciI	TCATGA	1 cut(s)	432
CfoI	GCGC	3 cut(s)	137, 1138, 1248
Cfr10I	RCCGGY	1 cut(s)	1508
ClaI	ATCGAT	1 cut(s)	1354
CseI	GACGC	2 cut(s)	1515, 1640
Csp6I	GTAC	3 cut(s)	1280, 1367, 1687
CviAII	CATG	8 cut(s)	27, 332, 433, 514, 610, 889, 1022, 1285
CviQI	GTAC	3 cut(s)	1280, 1367, 1687
DdeI	CTNAG	6 cut(s)	77, 204, 231, 614, 810, 1139
DpnI	GATC	8 cut(s)	100, 122, 131, 381, 420, 1300, 1503, 1551
DpnII	GATC	8 cut(s)	98, 120, 129, 379, 418, 1298, 1501, 1549
DraI	TTTAAA	1 cut(s)	898
EaeI	YGGCCR	2 cut(s)	264, 321
Ecl136II	GAGCTC	1 cut(s)	683
Eco130I	CCWWGG	1 cut(s)	546
Eco147I	AGGCCT	1 cut(s)	527
Eco24I	GRGCYC	2 cut(s)	114, 685
Eco31I	GGTCTC	1 cut(s)	981
Eco32I	GATATC	1 cut(s)	1009
Eco47III	AGCGCT	1 cut(s)	1137
Eco53kI	GAGCTC	1 cut(s)	683
Eco57I	CTGAAG	5 cut(s)	1082, 1152, 1248, 1520, 1632
EcoICRI	GAGCTC	1 cut(s)	683
EcoRI	GAATTC	1 cut(s)	1468
EcoRV	GATATC	1 cut(s)	1009
EcoT14I	CCWWGG	1 cut(s)	546
EcoT22I	ATGCAT	1 cut(s)	1576
EcoT38I	GRGCYC	2 cut(s)	114, 685
ErhI	CCWWGG	1 cut(s)	546
Esp3I	CGTCTC	1 cut(s)	635
FaeI	CATG	8 cut(s)	30, 335, 436, 517, 613, 892, 1025, 1288
FalI	AAGNNNNNCTT	2 cut(s)	1203, 1235
FaqI	GGGAC	1 cut(s)	1345
FatI	CATG	8 cut(s)	26, 331, 432, 513, 609, 888, 1021, 1284
FauI	CCCGC	2 cut(s)	25, 634
FauNDI	CATATG	1 cut(s)	1045
FbaI	TGATCA	3 cut(s)	418, 1501, 1549
FblI	GTMKAC	2 cut(s)	48, 1308
FokI	GGATG	5 cut(s)	167, 707, 875, 940, 1352
FriOI	GRGCYC	2 cut(s)	114, 685
FspBI	CTAG	8 cut(s)	41, 216, 663, 878, 905, 1455, 1518, 1566
FspI	TGCGCA	1 cut(s)	136
GlaI	GCGC	3 cut(s)	136, 1137, 1247
GsuI	CTGGAG	2 cut(s)	779, 1347
HaeII	RGCGCY	2 cut(s)	1139, 1249
HaeIII	GGCC	3 cut(s)	266, 323, 527
HapII	CCGG	3 cut(s)	734, 1012, 1509
HgaI	GACGC	2 cut(s)	1515, 1640
HhaI	GCGC	3 cut(s)	137, 1138, 1248
Hin1II	CATG	8 cut(s)	30, 335, 436, 517, 613, 892, 1025, 1288
Hin6I	GCGC	3 cut(s)	135, 1136, 1246
HinP1I	GCGC	3 cut(s)	135, 1136, 1246
HincII	GTYRAC	2 cut(s)	49, 565
HindII	GTYRAC	2 cut(s)	49, 565
HindIII	AAGCTT	1 cut(s)	1314
HinfI	GANTC	8 cut(s)	297, 672, 715, 866, 1223, 1492, 1540, 1703
HpaII	CCGG	3 cut(s)	734, 1012, 1509
HphI	GGTGA	3 cut(s)	263, 806, 1682
Hpy166II	GTNNAC	5 cut(s)	49, 565, 743, 1309, 1604
Hpy188III	TCNNGA	7 cut(s)	233, 433, 734, 938, 1114, 1190, 1700
Hpy8I	GTNNAC	5 cut(s)	49, 565, 743, 1309, 1604
HpyCH4III	ACNGT	5 cut(s)	67, 629, 1160, 1420, 1713
HpyCH4IV	ACGT	1 cut(s)	1240
HpyF10VI	GCNNNNNNNGC	5 cut(s)	314, 917, 1133, 1259, 1322
HpyF3I	CTNAG	6 cut(s)	77, 204, 231, 614, 810, 1139
HpySE526I	ACGT	1 cut(s)	1240
Hsp92II	CATG	8 cut(s)	30, 335, 436, 517, 613, 892, 1025, 1288
HspAI	GCGC	3 cut(s)	135, 1136, 1246
Kpn2I	TCCGGA	1 cut(s)	733
KroI	GCCGGC	1 cut(s)	1508
KroNI	GCCGGC	1 cut(s)	1510
Ksp22I	TGATCA	3 cut(s)	418, 1501, 1549
Kzo9I	GATC	8 cut(s)	98, 120, 129, 379, 418, 1298, 1501, 1549
LmnI	GCTCC	4 cut(s)	165, 736, 760, 1033
Lsp1109I	GCAGC	7 cut(s)	295, 317, 750, 834, 1114, 1438, 1524
LweI	GCATC	9 cut(s)	435, 448, 685, 898, 1249, 1382, 1438, 1576, 1583
MaeI	CTAG	8 cut(s)	41, 216, 663, 878, 905, 1455, 1518, 1566
MaeII	ACGT	1 cut(s)	1240
MaeIII	GTNAC	3 cut(s)	1051, 1457, 1657
MalI	GATC	8 cut(s)	100, 122, 131, 381, 420, 1300, 1503, 1551
MboI	GATC	8 cut(s)	98, 120, 129, 379, 418, 1298, 1501, 1549
MboII	GAAGA	9 cut(s)	368, 389, 1013, 1075, 1093, 1155, 1194, 1625, 1688
MfeI	CAATTG	2 cut(s)	58, 351
MhlI	GDGCHC	4 cut(s)	114, 232, 685, 745
MlsI	TGGCCA	1 cut(s)	323
MluNI	TGGCCA	1 cut(s)	323
MlyI	GAGTC	1 cut(s)	666
MmeI	TCCRAC	2 cut(s)	840, 1406
MnlI	CCTC	8 cut(s)	79, 229, 247, 496, 514, 517, 790, 1322
Mox20I	TGGCCA	1 cut(s)	323
Mph1103I	ATGCAT	1 cut(s)	1576
MroI	TCCGGA	1 cut(s)	733
MroNI	GCCGGC	1 cut(s)	1508
MscI	TGGCCA	1 cut(s)	323
MseI	TTAA	4 cut(s)	192, 474, 897, 1029
MslI	CAYNNNNRTG	3 cut(s)	336, 456, 792
Msp20I	TGGCCA	1 cut(s)	323
MspA1I	CMGCKG	3 cut(s)	308, 956, 1406
MspI	CCGG	3 cut(s)	734, 1012, 1509
MunI	CAATTG	2 cut(s)	58, 351
MwoI	GCNNNNNNNGC	5 cut(s)	314, 917, 1133, 1259, 1322
NaeI	GCCGGC	1 cut(s)	1510
NdeI	CATATG	1 cut(s)	1045
NdeII	GATC	8 cut(s)	98, 120, 129, 379, 418, 1298, 1501, 1549
NgoMIV	GCCGGC	1 cut(s)	1508
NlaIII	CATG	8 cut(s)	30, 335, 436, 517, 613, 892, 1025, 1288
NlaIV	GGNNCC	2 cut(s)	409, 1112
NmeAIII	GCCGAG	1 cut(s)	1274
NmuCI	GTSAC	2 cut(s)	1051, 1457
NsbI	TGCGCA	1 cut(s)	136
NsiI	ATGCAT	1 cut(s)	1576
NspI	RCATGY	1 cut(s)	335
PagI	TCATGA	1 cut(s)	432
PceI	AGGCCT	1 cut(s)	527
PcsI	WCGNNNNNNNCGW	1 cut(s)	1246
PdiI	GCCGGC	1 cut(s)	1510
PfeI	GAWTC	7 cut(s)	297, 715, 866, 1223, 1492, 1540, 1703
PflMI	CCANNNNNTGG	1 cut(s)	1388
Ple19I	CGATCG	1 cut(s)	101
PleI	GAGTC	1 cut(s)	666
PpsI	GAGTC	1 cut(s)	666
PsiI	TTATAA	1 cut(s)	489
Psp124BI	GAGCTC	1 cut(s)	685
PspN4I	GGNNCC	2 cut(s)	409, 1112
PstNI	CAGNNNCTG	1 cut(s)	1424
PvuI	CGATCG	1 cut(s)	101
PvuII	CAGCTG	1 cut(s)	308
RsaI	GTAC	3 cut(s)	1281, 1368, 1688
RsaNI	GTAC	3 cut(s)	1280, 1367, 1687
RseI	CAYNNNNRTG	3 cut(s)	336, 456, 792
SacI	GAGCTC	1 cut(s)	685
SalI	GTCGAC	1 cut(s)	47
SaqAI	TTAA	4 cut(s)	192, 474, 897, 1029
Sau3AI	GATC	8 cut(s)	98, 120, 129, 379, 418, 1298, 1501, 1549
ScaI	AGTACT	1 cut(s)	1688
SchI	GAGTC	1 cut(s)	666
SduI	GDGCHC	4 cut(s)	114, 232, 685, 745
SfaNI	GCATC	9 cut(s)	435, 448, 685, 898, 1249, 1382, 1438, 1576, 1583
SmiMI	CAYNNNNRTG	3 cut(s)	336, 456, 792
SmlI	CTYRAG	2 cut(s)	653, 1487
SmoI	CTYRAG	2 cut(s)	653, 1487
SpeI	ACTAGT	1 cut(s)	877
SseBI	AGGCCT	1 cut(s)	527
SsiI	CCGC	7 cut(s)	32, 387, 641, 925, 954, 1015, 1406
SspMI	CTAG	8 cut(s)	41, 216, 663, 878, 905, 1455, 1518, 1566
SstI	GAGCTC	1 cut(s)	685
StuI	AGGCCT	1 cut(s)	527
StyI	CCWWGG	1 cut(s)	546
TaaI	ACNGT	5 cut(s)	67, 629, 1160, 1420, 1713
TaiI	ACGT	1 cut(s)	1243
TaqI	TCGA	6 cut(s)	48, 101, 119, 295, 675, 1354
TatI	WGTACW	1 cut(s)	1686
TauI	GCSGC	3 cut(s)	956, 1018, 1409
TfiI	GAWTC	7 cut(s)	297, 715, 866, 1223, 1492, 1540, 1703
Tru1I	TTAA	4 cut(s)	192, 474, 897, 1029
Tru9I	TTAA	4 cut(s)	192, 474, 897, 1029
TscAI	CASTG	2 cut(s)	955, 1165
TseFI	GTSAC	2 cut(s)	1051, 1457
TseI	GCWGC	7 cut(s)	305, 308, 763, 847, 1127, 1451, 1512
Tsp45I	GTSAC	2 cut(s)	1051, 1457
TspDTI	ATGAA	8 cut(s)	333, 440, 598, 879, 1038, 1093, 1107, 1356
TspRI	CASTG	2 cut(s)	955, 1165
Van91I	CCANNNNNTGG	1 cut(s)	1388
VneI	GTGCAC	1 cut(s)	741
XapI	RAATTY	2 cut(s)	172, 1468
XceI	RCATGY	1 cut(s)	335
XmiI	GTMKAC	2 cut(s)	48, 1308
XspI	CTAG	8 cut(s)	41, 216, 663, 878, 905, 1455, 1518, 1566
ZrmI	AGTACT	1 cut(s)	1688
Zsp2I	ATGCAT	1 cut(s)	1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.