Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005734

Physical Location & Seq

Genomic Coordinates Forward (+)

29213113 .. 29215161

Gene Structure 2049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g33700.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCGAAAGTAAAAGTTGCAGGGGCGTGGGTGGGCGTGCTTGAAGTCGAATTGGACAAATGGAACGTATCCATGCTGAGACAAGAGGTTGCAAAGAGATCGAACAGCGATCCAAACTTGATCAATCTGATCTGCGCAGGCAGAGTGTTGAAGGATGGAGATGGGAGTGAGAATCTGACCCAAGTAGGTATGAAGAGCAACTCCAAGGTTCTTGCTAGTAGGGTTTCTGCTCAGGAGGGCAAGTCTTTGGGTGAGGAGCTGATGGCTGAAAGCGAACGCTCTCGGAGATTGGCTCGGATCAAGGCAGCAGCGACTGCAATGGCCAAGAGACATGCAGATGGTTCTTTGCCAGTTGAAAACTTCAATATAGAACTTGAAGATCAAAGCGGGAAGAAAGTAAAGATGGGAACGGAGACTGATCAGCAGGCAATCATGATGGGTCTGATGCTTCATACAGATGCAAAGAAACTGATTAAAGAACAGAATTACAAAGATGCATTGGAGGTGTTGAGCATGGGAGAGGAGGCTTTCTCTCTTTGTGACCCCAGTGTTATTGAGCTGGTGGACAATCCTTCTATACTGCAAATCGACATGGTTTGGTGTTATTTCATGCTCAAAGACATCAATTGCCTCTCGGTTGCGGGCCTTCGGCTTGAGAAGGCTAGAGAAGGACTCGAACGAGCTTATGGGAAGAATGCTTCTCGTATGAGACTGCTTCAGGCTGGTAGGTATCCGGAGCGTGCACTACATTTGAGACTGGAGCTACTTGAAGGGGTAGTGGCTTATCATAGTGGTCAGGTTGATTTATCTAGGAAGGTGCTGATTTCTGCCCAAGAAAAGTTTAGGCTACTACAAGTGTCGGATGAATCTCTTTCACTTGTGATGAGCATGGGGTTTAAAGAACTAGATGCAAAGAGGGCATTGCGGATGAGCAATCAAGATGTTTCTAGTGCTGTTGATTTTCTGGTTGAGCAAAAGGCAAAGAGAGACCAACAACGCGAAGATGATATCCGACGGGAACAGGAAATTATGGAGCAAAGGACGTATGGTGTGACACCCTTGAAGAAAGCTGTGGATCTGGAGAGATTGAATGAGTTGGTCTCCACTGGGTTCGAAAAGGAGCTTGCTGCTGAAGCGCTTAGAAGAAATGAGAATGACAGTGAGAAGGCATTACTTGATTTGACAAATCCAGAAGCTAATTCTACCATACAGGAACAACTTGCATCAAGGAAAAGGAAACGTCAGCGCCGAGCAGTAGATGCTTCAGTTGAAGCACTTGTAGGCATGGGATTTGAAAGATCATTAGTGAATGAAGCTTTGCAGGCTGGAGGGACAATGGAGGAAGTAATCCGTTCATTACTCTCAGGACAAGCATTGAATCCGACAAATGGTGTTACCCAATCTGAAGCAATCTCCACAGCTTCTGCTGACAACAATGGCCAAACTGATGCTGCTAGTGACATTGCGAATTCTCTTACTTCAATGCTTGAGAATCAAAATGGTCAAGCCGGAGGTTCTAGACATGCATCAGAGCCTGGAGGTTCTAGTCGTGCATCAGAGCGTGATTCAGAAATGGAGAATGAACTTGCTGAAGAACTAGCACAACAAGACGCTCTCTCTGACTATGACCTTGAAGTTACCAAAGAAGGTGAAGCCATAGGCGAGTACTTGGCTCTTCTGGATTCAGCACAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0019222 GO:0019538 GO:0019941 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0060255 GO:0061136 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA ubiquitin

Protein Analysis

565

Amino Acids

62.14

Weight (kDa)

5.03

Isoelectric Point (pI)

43.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_7	PF22562	291 - 325	6.3e-06	UBA-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G12550
fragaria_vesca	FvH4_1g01990 FvH4_1g01990 FvH4_1g01990 FvH4_3g33700
malus_domestica	MD15G1162100.v1.1
prunus_persica	Prupe.7G257500_v2.0.a1
pyrus_communis	pycom15g14580
rosa_chinensis	RchiOBHm_Chr2g0087051 RchiOBHm_Chr5g0061231
rosa_laevigata	RLG00000015824 RLG00000035444
rosa_multiflora	Rmu_sc0007612.1_g000046 Rmu_sc0010698.1_g000014
rosa_roxburghii	Rroxscaffold_1G00019470 Rroxscaffold_2G00153940
rosa_rugosa	Rorug01G0471700.1 Rorug05G0339000
rosa_samantha	Rh2AG025200 Rh2BG025000 Rh2CG025500 Rh2DG025400 Rh5BG413000 Rh5CG437500
rosa_wichuraiana	Rw0G022890 Rw0G023050 Rw2G002000 Rw5G037700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	136
AccII	CGCG	1 cut(s)	999
AccIII	TCCGGA	1 cut(s)	733
AciI	CCGC	3 cut(s)	387, 641, 925
AclWI	GGATC	3 cut(s)	104, 305, 1083
AcoI	YGGCCR	2 cut(s)	321, 1438
AcsI	RAATTY	1 cut(s)	1468
AcuI	CTGAAG	5 cut(s)	701, 1152, 1248, 1425, 1611
AfaI	GTAC	1 cut(s)	1667
AfeI	AGCGCT	1 cut(s)	1137
AfiI	CCNNNNNNNGG	1 cut(s)	1388
AjnI	CCWGG	1 cut(s)	1534
AluBI	AGCT	9 cut(s)	259, 559, 683, 763, 1070, 1123, 1196, 1316, 1421
AluI	AGCT	9 cut(s)	259, 559, 683, 763, 1070, 1123, 1196, 1316, 1421
Alw21I	GWGCWC	1 cut(s)	745
Alw26I	GTCTC	7 cut(s)	73, 322, 407, 703, 748, 981, 1105
Alw44I	GTGCAC	1 cut(s)	741
AlwI	GGATC	3 cut(s)	104, 305, 1083
AlwNI	CAGNNNCTG	3 cut(s)	314, 1424, 1535
Aor13HI	TCCGGA	1 cut(s)	733
Aor51HI	AGCGCT	1 cut(s)	1137
AoxI	GGCC	3 cut(s)	321, 643, 1438
ApaLI	GTGCAC	1 cut(s)	741
ApeKI	GCWGC	4 cut(s)	305, 308, 1127, 1451
ApoI	RAATTY	1 cut(s)	1468
AspLEI	GCGC	3 cut(s)	137, 1138, 1248
AspS9I	GGNCC	1 cut(s)	643
AsuHPI	GGTGA	2 cut(s)	263, 1661
AsuII	TTCGAA	1 cut(s)	1113
BaeGI	GKGCMC	1 cut(s)	745
BalI	TGGCCA	2 cut(s)	323, 1440
Bbv12I	GWGCWC	1 cut(s)	745
BbvI	GCAGC	4 cut(s)	317, 320, 1114, 1438
BccI	CCATC	6 cut(s)	149, 155, 256, 332, 397, 430
BcgI	CGANNNNNNTGC	2 cut(s)	81, 115
BciT130I	CCWGG	1 cut(s)	1536
BciVI	GTATCC	2 cut(s)	79, 741
BclI	TGATCA	2 cut(s)	120, 418
BcoDI	GTCTC	7 cut(s)	73, 322, 407, 703, 748, 981, 1105
BfaI	CTAG	9 cut(s)	216, 663, 810, 905, 948, 1455, 1518, 1545, 1598
BfoI	RGCGCY	2 cut(s)	1139, 1249
BfuI	GTATCC	2 cut(s)	79, 741
BisI	GCNGC	4 cut(s)	306, 309, 1128, 1452
BlsI	GCNGC	4 cut(s)	307, 310, 1129, 1453
BmcAI	AGTACT	1 cut(s)	1667
Bme1390I	CCNGG	1 cut(s)	1536
BmgT120I	GGNCC	1 cut(s)	643
BmrFI	CCNGG	1 cut(s)	1536
BmrI	ACTGGG	2 cut(s)	540, 1116
BmsI	GCATC	9 cut(s)	435, 448, 484, 898, 1232, 1249, 1438, 1535, 1562
BmuI	ACTGGG	2 cut(s)	540, 1116
BplI	GAGNNNNNCTC	8 cut(s)	277, 309, 515, 547, 657, 689, 1085, 1117
BpmI	CTGGAG	4 cut(s)	779, 1100, 1347, 1557
Bpu10I	CCTNAGC	1 cut(s)	231
Bpu14I	TTCGAA	1 cut(s)	1113
BpuEI	CTTGAG	2 cut(s)	674, 1508
BsaI	GGTCTC	2 cut(s)	981, 1105
BsaJI	CCNNGG	1 cut(s)	204
BsaWI	WCCGGW	1 cut(s)	733
BsaXI	ACNNNNNCTCC	2 cut(s)	227, 257
Bsc4I	CCNNNNNNNGG	1 cut(s)	1388
Bse1I	ACTGG	4 cut(s)	350, 546, 762, 1111
Bse3DI	GCAATG	3 cut(s)	324, 920, 1461
BseAI	TCCGGA	1 cut(s)	733
BseBI	CCWGG	1 cut(s)	1536
BseDI	CCNNGG	1 cut(s)	204
BseGI	GGATG	3 cut(s)	160, 868, 933
BseLI	CCNNNNNNNGG	1 cut(s)	1388
BseMI	GCAATG	3 cut(s)	324, 920, 1461
BseMII	CTCAG	3 cut(s)	68, 245, 1377
BseNI	ACTGG	4 cut(s)	350, 546, 762, 1111
BseRI	GAGGAG	2 cut(s)	269, 536
BseSI	GKGCMC	1 cut(s)	745
BseXI	GCAGC	4 cut(s)	317, 320, 1114, 1438
Bsh1236I	CGCG	1 cut(s)	999
BshFI	GGCC	3 cut(s)	323, 645, 1440
BsiHKAI	GWGCWC	1 cut(s)	745
BsiSI	CCGG	2 cut(s)	734, 1509
BslFI	GGGAC	1 cut(s)	1345
BslI	CCNNNNNNNGG	1 cut(s)	1388
BsmAI	GTCTC	7 cut(s)	73, 322, 407, 703, 748, 981, 1105
BsmFI	GGGAC	1 cut(s)	1345
BsmI	GAATGC	1 cut(s)	700
BsnI	GGCC	3 cut(s)	323, 645, 1440
Bso31I	GGTCTC	2 cut(s)	981, 1105
Bsp119I	TTCGAA	1 cut(s)	1113
Bsp1286I	GDGCHC	1 cut(s)	745
Bsp13I	TCCGGA	1 cut(s)	733
Bsp143I	GATC	9 cut(s)	98, 109, 120, 129, 297, 379, 418, 1075, 1298
BspACI	CCGC	3 cut(s)	387, 641, 925
BspANI	GGCC	3 cut(s)	323, 645, 1440
BspCNI	CTCAG	3 cut(s)	69, 244, 1376
BspEI	TCCGGA	1 cut(s)	733
BspFNI	CGCG	1 cut(s)	999
BspHI	TCATGA	1 cut(s)	432
BspPI	GGATC	3 cut(s)	104, 305, 1083
BspQI	GCTCTTC	2 cut(s)	188, 1680
BspT104I	TTCGAA	1 cut(s)	1113
BspTNI	GGTCTC	2 cut(s)	981, 1105
BsrDI	GCAATG	3 cut(s)	324, 920, 1461
BsrI	ACTGG	4 cut(s)	350, 546, 762, 1111
BssECI	CCNNGG	1 cut(s)	204
BssMI	GATC	9 cut(s)	98, 109, 120, 129, 297, 379, 418, 1075, 1298
BssT1I	CCWWGG	1 cut(s)	204
Bst2UI	CCWGG	1 cut(s)	1536
Bst4CI	ACNGT	2 cut(s)	1160, 1692
Bst6I	CTCTTC	2 cut(s)	188, 1680
BstAPI	GCANNNNNTGC	2 cut(s)	314, 1259
BstBI	TTCGAA	1 cut(s)	1113
BstC8I	GCNNGC	7 cut(s)	38, 139, 426, 643, 741, 1125, 1323
BstDEI	CTNAG	4 cut(s)	77, 231, 1139, 1363
BstF5I	GGATG	3 cut(s)	160, 868, 933
BstFNI	CGCG	1 cut(s)	999
BstH2I	RGCGCY	2 cut(s)	1139, 1249
BstHHI	GCGC	3 cut(s)	137, 1138, 1248
BstKTI	GATC	9 cut(s)	101, 112, 123, 132, 300, 382, 421, 1078, 1301
BstMAI	GTCTC	7 cut(s)	73, 322, 407, 703, 748, 981, 1105
BstMBI	GATC	9 cut(s)	98, 109, 120, 129, 297, 379, 418, 1075, 1298
BstMWI	GCNNNNNNNGC	5 cut(s)	314, 917, 1133, 1259, 1322
BstNI	CCWGG	1 cut(s)	1536
BstNSI	RCATGY	2 cut(s)	335, 1526
BstSCI	CCNGG	1 cut(s)	1534
BstSLI	GKGCMC	1 cut(s)	745
BstUI	CGCG	1 cut(s)	999
BstV1I	GCAGC	4 cut(s)	317, 320, 1114, 1438
BstX2I	RGATCY	1 cut(s)	1075
BstYI	RGATCY	1 cut(s)	1075
BsuI	GTATCC	2 cut(s)	79, 741
BsuRI	GGCC	3 cut(s)	323, 645, 1440
BtsCI	GGATG	3 cut(s)	160, 868, 933
BtsIMutI	CAGTG	3 cut(s)	553, 1104, 1165
Cac8I	GCNNGC	7 cut(s)	38, 139, 426, 643, 741, 1125, 1323
CaiI	CAGNNNCTG	3 cut(s)	314, 1424, 1535
CciI	TCATGA	1 cut(s)	432
CfoI	GCGC	3 cut(s)	137, 1138, 1248
Cfr13I	GGNCC	1 cut(s)	643
CseI	GACGC	1 cut(s)	1619
Csp6I	GTAC	1 cut(s)	1666
CviAII	CATG	9 cut(s)	73, 332, 433, 514, 592, 610, 889, 1285, 1523
CviQI	GTAC	1 cut(s)	1666
DdeI	CTNAG	4 cut(s)	77, 231, 1139, 1363
DpnI	GATC	9 cut(s)	100, 111, 122, 131, 299, 381, 420, 1077, 1300
DpnII	GATC	9 cut(s)	98, 109, 120, 129, 297, 379, 418, 1075, 1298
DraI	TTTAAA	1 cut(s)	898
EaeI	YGGCCR	2 cut(s)	321, 1438
Eam1104I	CTCTTC	2 cut(s)	188, 1680
EarI	CTCTTC	2 cut(s)	188, 1680
Eco130I	CCWWGG	1 cut(s)	204
Eco31I	GGTCTC	2 cut(s)	981, 1105
Eco32I	GATATC	1 cut(s)	1009
Eco47III	AGCGCT	1 cut(s)	1137
Eco57I	CTGAAG	5 cut(s)	701, 1152, 1248, 1425, 1611
EcoRI	GAATTC	1 cut(s)	1468
EcoRII	CCWGG	1 cut(s)	1534
EcoRV	GATATC	1 cut(s)	1009
EcoT14I	CCWWGG	1 cut(s)	204
EcoT22I	ATGCAT	2 cut(s)	499, 1528
ErhI	CCWWGG	1 cut(s)	204
FaeI	CATG	9 cut(s)	76, 335, 436, 517, 595, 613, 892, 1288, 1526
FaqI	GGGAC	1 cut(s)	1345
FatI	CATG	9 cut(s)	72, 331, 432, 513, 591, 609, 888, 1284, 1522
FauI	CCCGC	2 cut(s)	380, 634
FbaI	TGATCA	2 cut(s)	120, 418
Fnu4HI	GCNGC	4 cut(s)	306, 309, 1128, 1452
FokI	GGATG	3 cut(s)	167, 875, 940
Fsp4HI	GCNGC	4 cut(s)	306, 309, 1128, 1452
FspBI	CTAG	9 cut(s)	216, 663, 810, 905, 948, 1455, 1518, 1545, 1598
FspI	TGCGCA	1 cut(s)	136
GlaI	GCGC	3 cut(s)	136, 1137, 1247
GluI	GCNGC	4 cut(s)	306, 309, 1128, 1452
GsuI	CTGGAG	4 cut(s)	779, 1100, 1347, 1557
HaeII	RGCGCY	2 cut(s)	1139, 1249
HaeIII	GGCC	3 cut(s)	323, 645, 1440
HapII	CCGG	2 cut(s)	734, 1509
HgaI	GACGC	1 cut(s)	1619
HhaI	GCGC	3 cut(s)	137, 1138, 1248
Hin1II	CATG	9 cut(s)	76, 335, 436, 517, 595, 613, 892, 1288, 1526
Hin6I	GCGC	3 cut(s)	135, 1136, 1246
HinP1I	GCGC	3 cut(s)	135, 1136, 1246
HindIII	AAGCTT	1 cut(s)	1314
HinfI	GANTC	7 cut(s)	172, 672, 866, 1378, 1492, 1565, 1682
HpaII	CCGG	2 cut(s)	734, 1509
HphI	GGTGA	2 cut(s)	263, 1661
Hpy166II	GTNNAC	2 cut(s)	565, 743
Hpy188III	TCNNGA	9 cut(s)	233, 433, 734, 938, 1079, 1190, 1365, 1518, 1679
Hpy8I	GTNNAC	2 cut(s)	565, 743
Hpy99I	CGWCG	1 cut(s)	1017
HpyAV	CCTTC	9 cut(s)	145, 582, 652, 656, 662, 764, 808, 1159, 1640
HpyCH4III	ACNGT	2 cut(s)	1160, 1692
HpyCH4IV	ACGT	3 cut(s)	66, 1043, 1240
HpyF10VI	GCNNNNNNNGC	5 cut(s)	314, 917, 1133, 1259, 1322
HpyF3I	CTNAG	4 cut(s)	77, 231, 1139, 1363
HpySE526I	ACGT	3 cut(s)	66, 1043, 1240
Hsp92II	CATG	9 cut(s)	76, 335, 436, 517, 595, 613, 892, 1288, 1526
HspAI	GCGC	3 cut(s)	135, 1136, 1246
Kpn2I	TCCGGA	1 cut(s)	733
Ksp22I	TGATCA	2 cut(s)	120, 418
Kzo9I	GATC	9 cut(s)	98, 109, 120, 129, 297, 379, 418, 1075, 1298
LguI	GCTCTTC	2 cut(s)	188, 1680
LmnI	GCTCC	5 cut(s)	256, 736, 760, 1033, 1120
Lsp1109I	GCAGC	4 cut(s)	317, 320, 1114, 1438
LweI	GCATC	9 cut(s)	435, 448, 484, 898, 1232, 1249, 1438, 1535, 1562
MaeI	CTAG	9 cut(s)	216, 663, 810, 905, 948, 1455, 1518, 1545, 1598
MaeII	ACGT	3 cut(s)	66, 1043, 1240
MaeIII	GTNAC	5 cut(s)	539, 1051, 1393, 1457, 1636
MalI	GATC	9 cut(s)	100, 111, 122, 131, 299, 381, 420, 1077, 1300
MboI	GATC	9 cut(s)	98, 109, 120, 129, 297, 379, 418, 1075, 1298
MboII	GAAGA	9 cut(s)	205, 389, 403, 703, 1013, 1075, 1155, 1604, 1667
MfeI	CAATTG	1 cut(s)	625
MflI	RGATCY	1 cut(s)	1075
MhlI	GDGCHC	1 cut(s)	745
MlsI	TGGCCA	2 cut(s)	323, 1440
MluCI	AATT	6 cut(s)	50, 484, 625, 1026, 1198, 1468
MluNI	TGGCCA	2 cut(s)	323, 1440
MlyI	GAGTC	1 cut(s)	666
MmeI	TCCRAC	3 cut(s)	840, 1036, 1406
Mox20I	TGGCCA	2 cut(s)	323, 1440
Mph1103I	ATGCAT	2 cut(s)	499, 1528
MroI	TCCGGA	1 cut(s)	733
MscI	TGGCCA	2 cut(s)	323, 1440
MseI	TTAA	2 cut(s)	474, 897
MslI	CAYNNNNRTG	2 cut(s)	336, 456
Msp20I	TGGCCA	2 cut(s)	323, 1440
MspI	CCGG	2 cut(s)	734, 1509
MspR9I	CCNGG	1 cut(s)	1536
MunI	CAATTG	1 cut(s)	625
Mva1269I	GAATGC	1 cut(s)	700
MvaI	CCWGG	1 cut(s)	1536
MvnI	CGCG	1 cut(s)	999
MwoI	GCNNNNNNNGC	5 cut(s)	314, 917, 1133, 1259, 1322
NdeII	GATC	9 cut(s)	98, 109, 120, 129, 297, 379, 418, 1075, 1298
NlaIII	CATG	9 cut(s)	76, 335, 436, 517, 595, 613, 892, 1288, 1526
NmeAIII	GCCGAG	1 cut(s)	1274
NmuCI	GTSAC	3 cut(s)	539, 1051, 1457
NsbI	TGCGCA	1 cut(s)	136
NsiI	ATGCAT	2 cut(s)	499, 1528
NspI	RCATGY	2 cut(s)	335, 1526
NspV	TTCGAA	1 cut(s)	1113
PagI	TCATGA	1 cut(s)	432
PciSI	GCTCTTC	2 cut(s)	188, 1680
PcsI	WCGNNNNNNNCGW	1 cut(s)	1246
PctI	GAATGC	1 cut(s)	700
PfeI	GAWTC	6 cut(s)	172, 866, 1378, 1492, 1565, 1682
PkrI	GCNGC	4 cut(s)	307, 310, 1129, 1453
PleI	GAGTC	1 cut(s)	666
PpsI	GAGTC	1 cut(s)	666
Psp6I	CCWGG	1 cut(s)	1534
PspGI	CCWGG	1 cut(s)	1534
PspPI	GGNCC	1 cut(s)	643
PstNI	CAGNNNCTG	3 cut(s)	314, 1424, 1535
PsuI	RGATCY	1 cut(s)	1075
RsaI	GTAC	1 cut(s)	1667
RsaNI	GTAC	1 cut(s)	1666
RseI	CAYNNNNRTG	2 cut(s)	336, 456
SapI	GCTCTTC	2 cut(s)	188, 1680
SaqAI	TTAA	2 cut(s)	474, 897
SatI	GCNGC	4 cut(s)	306, 309, 1128, 1452
Sau3AI	GATC	9 cut(s)	98, 109, 120, 129, 297, 379, 418, 1075, 1298
Sau96I	GGNCC	1 cut(s)	643
ScaI	AGTACT	1 cut(s)	1667
SchI	GAGTC	1 cut(s)	666
ScrFI	CCNGG	1 cut(s)	1536
SduI	GDGCHC	1 cut(s)	745
SfaNI	GCATC	9 cut(s)	435, 448, 484, 898, 1232, 1249, 1438, 1535, 1562
SfuI	TTCGAA	1 cut(s)	1113
SmiMI	CAYNNNNRTG	2 cut(s)	336, 456
SmlI	CTYRAG	2 cut(s)	653, 1487
SmoI	CTYRAG	2 cut(s)	653, 1487
Sse9I	AATT	6 cut(s)	50, 484, 625, 1026, 1198, 1468
SsiI	CCGC	3 cut(s)	387, 641, 925
SspMI	CTAG	9 cut(s)	216, 663, 810, 905, 948, 1455, 1518, 1545, 1598
StyD4I	CCNGG	1 cut(s)	1534
StyI	CCWWGG	1 cut(s)	204
TaaI	ACNGT	2 cut(s)	1160, 1692
TaiI	ACGT	3 cut(s)	69, 1046, 1243
TaqI	TCGA	5 cut(s)	48, 101, 588, 675, 1113
TasI	AATT	6 cut(s)	50, 484, 625, 1026, 1198, 1468
TatI	WGTACW	1 cut(s)	1665
TfiI	GAWTC	6 cut(s)	172, 866, 1378, 1492, 1565, 1682
Tru1I	TTAA	2 cut(s)	474, 897
Tru9I	TTAA	2 cut(s)	474, 897
TscAI	CASTG	3 cut(s)	553, 1111, 1165
TseFI	GTSAC	3 cut(s)	539, 1051, 1457
TseI	GCWGC	4 cut(s)	305, 308, 1127, 1451
Tsp45I	GTSAC	3 cut(s)	539, 1051, 1457
TspDTI	ATGAA	7 cut(s)	206, 440, 598, 879, 1326, 1344, 1596
TspGWI	ACGGA	2 cut(s)	425, 1340
TspRI	CASTG	3 cut(s)	553, 1111, 1165
VneI	GTGCAC	1 cut(s)	741
XapI	RAATTY	1 cut(s)	1468
XbaI	TCTAGA	1 cut(s)	1517
XceI	RCATGY	2 cut(s)	335, 1526
XspI	CTAG	9 cut(s)	216, 663, 810, 905, 948, 1455, 1518, 1545, 1598
ZrmI	AGTACT	1 cut(s)	1667
Zsp2I	ATGCAT	2 cut(s)	499, 1528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.