Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig01061

Orthogroup ID

OG0005734

Physical Location & Seq

Genomic Coordinates Reverse (-)

23680 .. 27189

Gene Structure 3510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G022890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGCGAAAGTAAAGATTGCAGGGACATGGGCGGGTGTGCTGGAGGTCGAACTGGACAATTGGACGGTGCCCATGTTGAGAGAAGAGGTTGCAAAGCGATCCAACTGCGAGCCCGGCTCGATCAACTTGATATGCGCCGGCCGAGTTTTGAAGGACGGCGATGGCAGCGAGAATTTGACCCAACTGGGTGTTAAGAACAACGCAAAGATTCTGGCTAGTCGGGTTTGTGCTCAGGAGGGTAAGTCTTTGGGTCAGGAGCTGATGGCCGAAAGCGAACGCGCTCAGAGACTCGCTCGAGTCAAGGCTGCTGCAACTGCGCTCTCCAAGAGACATGCTGATGGTTCATTGCCAATTGAAGATTTCAATATAGTACTTGAAGATCAGAGTGGAAAGAAAGTACAAATGGGATCGGAGACTGATCAGCGGGCAATCATGATGGGCCTGATGCTCCATACCAATGCAAAGCAATTGATTAAAGCACAAAATTACCAAGATGCATTGGAAGTGCTCACCATGGGAGAGGAGGCTTTCTCTCTTTGTGATCCGAAGGTTATTGAGCTGGTTGACAATCCTTCTATACTGCAAATCGATATGGTTTGGTGTTATTTTATGCTTAGAGACATCAACTGGCTCTCAGTGGCAGGCTTTCGCCTTGAGAAAGCCAGAGAAGGACTTGAACGAAGCTCATGGAAAGGACTCTTCTCATATTTGAGATTGGAGCTGCTGGAAGGGGTGGTGGCCTATCACAGTGGTCAGGTTGATAAGTCAATGAAGGTGTTGACTTCTGCACAAGAGAAGTTCACCCAGCTTCAGGTGCCGGATGAATCTCTTTCTCTTGTGATGAGCATGGGCTTCAGAGAGCGAGATGCAAAAAGGGCACTGAGGATGAGCAATCAAGATGTTTCCAGTGCTGTTGATTTTCTTGTTGCGCAGAAAGCAAAGACAGCCCAAAAACGGGAAGATGATATCCGGCGGCGAGATGAAATTAAGGAGCAAAAGAAGTATGGTACTACACCCCTGAAGAAAGCTGTGGATATCGAGAAATTGAACCAACTGGTCTCCATTGGGTTTGAAAAGGAGCTTGCTGCTGAAGCACTACGAAGAAATGAGAATGACAGTGAGAAGGCATTGGATGATTTGACAAATCCAGAGACAAATTCTTCCATACAGCAACATCTTGAATCAAGGAAAAGTAAACGACAGCGCCAAGCAGTAGATGCTTCAGTTGAAGCCCTTGTACGCATGGGCTTTGACAGATCATTAGCGGTCGAAGCTTTGCGGGGTGGAGGGACAATGGACCAAGCAATCCGTCGACTGCTCTCGGGACAGGCACCAAACCCCACAAATGCTGCTGACCAACCTGAGGCAATTCCTGCAGTCGATGCTAACAACAATAACCAATCTGATGCTGCTACTGACATTGCAAATTCTCTTGCTTCAATGCTTGATGATCAAAATGGTGAAGTCGGAGTTCCTTCAACATCTAGTAATGCATCAGAGCGTGATGCAGAAATGGAAAGCGAACTTGCTGAAGAACTAGCACAAGCAGATGCTTTCACTGACTATGACATCGAAGTTACTAAAGAAGGTGAAGCCATAATCGAGTACTTGGCTCTACTGAATTCAGCGGGAACAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0019222 GO:0019538 GO:0019941 GO:0030162 GO:0030163 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0060255 GO:0061136 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901800 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA ubiquitin

Protein Analysis

546

Amino Acids

60.17

Weight (kDa)

4.98

Isoelectric Point (pI)

40.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G12550
fragaria_vesca	FvH4_1g01990 FvH4_1g01990 FvH4_1g01990 FvH4_3g33700
malus_domestica	MD15G1162100.v1.1
prunus_persica	Prupe.7G257500_v2.0.a1
pyrus_communis	pycom15g14580
rosa_chinensis	RchiOBHm_Chr2g0087051 RchiOBHm_Chr5g0061231
rosa_laevigata	RLG00000015824 RLG00000035444
rosa_multiflora	Rmu_sc0007612.1_g000046 Rmu_sc0010698.1_g000014
rosa_roxburghii	Rroxscaffold_1G00019470 Rroxscaffold_2G00153940
rosa_rugosa	Rorug01G0471700.1 Rorug05G0339000
rosa_samantha	Rh2AG025200 Rh2BG025000 Rh2CG025500 Rh2DG025400 Rh5BG413000 Rh5CG437500
rosa_wichuraiana	Rw0G022890 Rw0G023050 Rw2G002000 Rw5G037700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	930
AccB1I	GGYRCC	3 cut(s)	67, 814, 1330
AccI	GTMKAC	1 cut(s)	1312
AccII	CGCG	1 cut(s)	279
AciI	CCGC	6 cut(s)	32, 424, 973, 1265, 1279, 1628
AclWI	GGATC	3 cut(s)	93, 415, 536
AcoI	YGGCCR	2 cut(s)	139, 264
AcsI	RAATTY	4 cut(s)	172, 1156, 1426, 1621
AcuI	CTGAAG	6 cut(s)	794, 838, 1040, 1110, 1206, 1551
AfaI	GTAC	5 cut(s)	372, 399, 1009, 1239, 1607
AfiI	CCNNNNNNNGG	4 cut(s)	811, 954, 955, 1363
AluBI	AGCT	8 cut(s)	259, 559, 684, 721, 808, 1028, 1081, 1274
AluI	AGCT	8 cut(s)	259, 559, 684, 721, 808, 1028, 1081, 1274
Alw21I	GWGCWC	2 cut(s)	232, 510
Alw26I	GTCTC	6 cut(s)	280, 322, 407, 612, 1063, 1145
AlwI	GGATC	3 cut(s)	93, 415, 536
AlwNI	CAGNNNCTG	1 cut(s)	259
Ama87I	CYCGRG	2 cut(s)	294, 1321
AoxI	GGCC	4 cut(s)	139, 264, 439, 738
ApeKI	GCWGC	7 cut(s)	165, 305, 308, 721, 1085, 1349, 1409
ApoI	RAATTY	4 cut(s)	172, 1156, 1426, 1621
AspLEI	GCGC	5 cut(s)	137, 281, 319, 931, 1206
AspS9I	GGNCC	2 cut(s)	439, 1297
AsuC2I	CCSGG	1 cut(s)	114
AsuHPI	GGTGA	4 cut(s)	502, 793, 1472, 1601
AvaI	CYCGRG	2 cut(s)	294, 1321
AvaII	GGWCC	1 cut(s)	1297
AxyI	CCTNAGG	1 cut(s)	1362
BaeGI	GKGCMC	2 cut(s)	72, 880
BanI	GGYRCC	3 cut(s)	67, 814, 1330
BanII	GRGCYC	1 cut(s)	114
BarI	GAAGNNNNNNTAC	2 cut(s)	1221, 1253
Bbv12I	GWGCWC	2 cut(s)	232, 510
BbvI	GCAGC	7 cut(s)	177, 292, 295, 708, 1072, 1336, 1396
BccI	CCATC	4 cut(s)	155, 256, 332, 430
BceAI	ACGGC	1 cut(s)	172
BcgI	CGANNNNNNTGC	2 cut(s)	87, 121
BclI	TGATCA	2 cut(s)	418, 1450
BcnI	CCSGG	1 cut(s)	114
BcoDI	GTCTC	6 cut(s)	280, 322, 407, 612, 1063, 1145
BfaI	CTAG	3 cut(s)	216, 1485, 1538
BfmI	CTRYAG	1 cut(s)	1374
BfoI	RGCGCY	1 cut(s)	1207
BisI	GCNGC	8 cut(s)	166, 306, 309, 722, 974, 1086, 1350, 1410
BlsI	GCNGC	8 cut(s)	167, 307, 310, 723, 975, 1087, 1351, 1411
BmcAI	AGTACT	2 cut(s)	372, 1607
Bme1390I	CCNGG	1 cut(s)	114
Bme18I	GGWCC	1 cut(s)	1297
BmeT110I	CYCGRG	2 cut(s)	294, 1321
BmgT120I	GGNCC	2 cut(s)	439, 1297
BmiI	GGNNCC	3 cut(s)	69, 816, 1332
BmrFI	CCNGG	1 cut(s)	114
BmrI	ACTGGG	1 cut(s)	194
BmsI	GCATC	9 cut(s)	435, 484, 856, 1207, 1372, 1396, 1495, 1502, 1540
BmuI	ACTGGG	1 cut(s)	194
BplI	GAGNNNNNCTC	6 cut(s)	101, 133, 277, 309, 515, 547
BpmI	CTGGAG	1 cut(s)	62
Bpu10I	CCTNAGC	1 cut(s)	231
BpuEI	CTTGAG	1 cut(s)	674
BpuMI	CCSGG	1 cut(s)	114
Bsa29I	ATCGAT	1 cut(s)	588
BsaI	GGTCTC	1 cut(s)	1063
BsaJI	CCNNGG	1 cut(s)	513
BsaXI	ACNNNNNCTCC	2 cut(s)	227, 257
Bsc4I	CCNNNNNNNGG	4 cut(s)	811, 954, 955, 1363
Bse118I	RCCGGY	1 cut(s)	137
Bse1I	ACTGG	5 cut(s)	57, 189, 632, 906, 1059
Bse21I	CCTNAGG	1 cut(s)	1362
Bse3DI	GCAATG	2 cut(s)	344, 1419
BseCI	ATCGAT	1 cut(s)	588
BseDI	CCNNGG	1 cut(s)	513
BseGI	GGATG	3 cut(s)	826, 891, 1138
BseLI	CCNNNNNNNGG	4 cut(s)	811, 954, 955, 1363
BseMI	GCAATG	2 cut(s)	344, 1419
BseMII	CTCAG	5 cut(s)	245, 296, 648, 872, 1353
BseNI	ACTGG	5 cut(s)	57, 189, 632, 906, 1059
BseRI	GAGGAG	1 cut(s)	536
BseSI	GKGCMC	2 cut(s)	72, 880
BseX3I	CGGCCG	1 cut(s)	139
BseXI	GCAGC	7 cut(s)	177, 292, 295, 708, 1072, 1336, 1396
BseYI	CCCAGC	1 cut(s)	804
BsgI	GTGCAG	1 cut(s)	771
Bsh1236I	CGCG	1 cut(s)	279
Bsh1285I	CGRYCG	2 cut(s)	142, 1269
BshFI	GGCC	4 cut(s)	141, 266, 441, 740
BshNI	GGYRCC	3 cut(s)	67, 814, 1330
BshVI	ATCGAT	1 cut(s)	588
BsiEI	CGRYCG	2 cut(s)	142, 1269
BsiHKAI	GWGCWC	2 cut(s)	232, 510
BsiHKCI	CYCGRG	2 cut(s)	294, 1321
BsiSI	CCGG	4 cut(s)	114, 138, 818, 970
BslFI	GGGAC	3 cut(s)	37, 1303, 1338
BslI	CCNNNNNNNGG	4 cut(s)	811, 954, 955, 1363
BsmAI	GTCTC	6 cut(s)	280, 322, 407, 612, 1063, 1145
BsmFI	GGGAC	3 cut(s)	37, 1303, 1338
BsnI	GGCC	4 cut(s)	141, 266, 441, 740
Bso31I	GGTCTC	1 cut(s)	1063
BsoBI	CYCGRG	2 cut(s)	294, 1321
Bsp1286I	GDGCHC	5 cut(s)	72, 114, 232, 510, 880
Bsp143I	GATC	8 cut(s)	98, 120, 379, 407, 418, 541, 1256, 1450
Bsp19I	CCATGG	1 cut(s)	513
BspACI	CCGC	6 cut(s)	32, 424, 973, 1265, 1279, 1628
BspANI	GGCC	4 cut(s)	141, 266, 441, 740
BspCNI	CTCAG	5 cut(s)	244, 295, 647, 873, 1354
BspDI	ATCGAT	1 cut(s)	588
BspFNI	CGCG	1 cut(s)	279
BspHI	TCATGA	1 cut(s)	432
BspLI	GGNNCC	3 cut(s)	69, 816, 1332
BspMAI	CTGCAG	1 cut(s)	1378
BspPI	GGATC	3 cut(s)	93, 415, 536
BspT107I	GGYRCC	3 cut(s)	67, 814, 1330
BspTNI	GGTCTC	1 cut(s)	1063
BsrDI	GCAATG	2 cut(s)	344, 1419
BsrFI	RCCGGY	1 cut(s)	137
BsrI	ACTGG	5 cut(s)	57, 189, 632, 906, 1059
BssAI	RCCGGY	1 cut(s)	137
BssECI	CCNNGG	1 cut(s)	513
BssMI	GATC	8 cut(s)	98, 120, 379, 407, 418, 541, 1256, 1450
BssT1I	CCWWGG	1 cut(s)	513
Bst4CI	ACNGT	3 cut(s)	67, 749, 1118
Bst6I	CTCTTC	2 cut(s)	78, 704
BstAPI	GCANNNNNTGC	3 cut(s)	1217, 1373, 1382
BstC8I	GCNNGC	5 cut(s)	110, 139, 426, 643, 1083
BstDEI	CTNAG	6 cut(s)	231, 282, 614, 634, 881, 1362
BstDSI	CCRYGG	1 cut(s)	513
BstF5I	GGATG	3 cut(s)	826, 891, 1138
BstFNI	CGCG	1 cut(s)	279
BstH2I	RGCGCY	1 cut(s)	1207
BstHHI	GCGC	5 cut(s)	137, 281, 319, 931, 1206
BstKTI	GATC	8 cut(s)	101, 123, 382, 410, 421, 544, 1259, 1453
BstMAI	GTCTC	6 cut(s)	280, 322, 407, 612, 1063, 1145
BstMBI	GATC	8 cut(s)	98, 120, 379, 407, 418, 541, 1256, 1450
BstMCI	CGRYCG	2 cut(s)	142, 1269
BstNSI	RCATGY	1 cut(s)	335
BstSCI	CCNGG	1 cut(s)	112
BstSFI	CTRYAG	1 cut(s)	1374
BstSLI	GKGCMC	2 cut(s)	72, 880
BstUI	CGCG	1 cut(s)	279
BstV1I	GCAGC	7 cut(s)	177, 292, 295, 708, 1072, 1336, 1396
BstZI	CGGCCG	1 cut(s)	139
Bsu15I	ATCGAT	1 cut(s)	588
Bsu36I	CCTNAGG	1 cut(s)	1362
BsuRI	GGCC	4 cut(s)	141, 266, 441, 740
BsuTUI	ATCGAT	1 cut(s)	588
BtgI	CCRYGG	1 cut(s)	513
BtgZI	GCGATG	1 cut(s)	174
BtsCI	GGATG	3 cut(s)	826, 891, 1138
BtsIMutI	CAGTG	6 cut(s)	642, 754, 878, 913, 1123, 1557
Cac8I	GCNNGC	5 cut(s)	110, 139, 426, 643, 1083
CaiI	CAGNNNCTG	1 cut(s)	259
CciI	TCATGA	1 cut(s)	432
CfoI	GCGC	5 cut(s)	137, 281, 319, 931, 1206
Cfr10I	RCCGGY	1 cut(s)	137
Cfr13I	GGNCC	2 cut(s)	439, 1297
ClaI	ATCGAT	1 cut(s)	588
Csp6I	GTAC	5 cut(s)	371, 398, 1008, 1238, 1606
CviAII	CATG	8 cut(s)	27, 73, 332, 433, 514, 687, 847, 1243
CviQI	GTAC	5 cut(s)	371, 398, 1008, 1238, 1606
DdeI	CTNAG	6 cut(s)	231, 282, 614, 634, 881, 1362
DpnI	GATC	8 cut(s)	100, 122, 381, 409, 420, 543, 1258, 1452
DpnII	GATC	8 cut(s)	98, 120, 379, 407, 418, 541, 1256, 1450
EaeI	YGGCCR	2 cut(s)	139, 264
EagI	CGGCCG	1 cut(s)	139
Eam1104I	CTCTTC	2 cut(s)	78, 704
EarI	CTCTTC	2 cut(s)	78, 704
EclXI	CGGCCG	1 cut(s)	139
Eco130I	CCWWGG	1 cut(s)	513
Eco24I	GRGCYC	1 cut(s)	114
Eco31I	GGTCTC	1 cut(s)	1063
Eco32I	GATATC	2 cut(s)	967, 1036
Eco47I	GGWCC	1 cut(s)	1297
Eco52I	CGGCCG	1 cut(s)	139
Eco57I	CTGAAG	6 cut(s)	794, 838, 1040, 1110, 1206, 1551
Eco81I	CCTNAGG	1 cut(s)	1362
Eco88I	CYCGRG	2 cut(s)	294, 1321
EcoRI	GAATTC	1 cut(s)	1621
EcoRV	GATATC	2 cut(s)	967, 1036
EcoT14I	CCWWGG	1 cut(s)	513
EcoT22I	ATGCAT	2 cut(s)	499, 1495
EcoT38I	GRGCYC	1 cut(s)	114
ErhI	CCWWGG	1 cut(s)	513
FaeI	CATG	8 cut(s)	30, 76, 335, 436, 517, 690, 850, 1246
FaqI	GGGAC	3 cut(s)	37, 1303, 1338
FatI	CATG	8 cut(s)	26, 72, 331, 432, 513, 686, 846, 1242
FauI	CCCGC	4 cut(s)	25, 417, 1272, 1621
FbaI	TGATCA	2 cut(s)	418, 1450
FblI	GTMKAC	1 cut(s)	1312
Fnu4HI	GCNGC	8 cut(s)	166, 306, 309, 722, 974, 1086, 1350, 1410
FokI	GGATG	3 cut(s)	833, 898, 1145
FriOI	GRGCYC	1 cut(s)	114
Fsp4HI	GCNGC	8 cut(s)	166, 306, 309, 722, 974, 1086, 1350, 1410
FspBI	CTAG	3 cut(s)	216, 1485, 1538
FspI	TGCGCA	1 cut(s)	930
GlaI	GCGC	5 cut(s)	136, 280, 318, 930, 1205
GluI	GCNGC	8 cut(s)	166, 306, 309, 722, 974, 1086, 1350, 1410
GsaI	CCCAGC	1 cut(s)	808
GsuI	CTGGAG	1 cut(s)	62
HaeII	RGCGCY	1 cut(s)	1207
HaeIII	GGCC	4 cut(s)	141, 266, 441, 740
HapII	CCGG	4 cut(s)	114, 138, 818, 970
HhaI	GCGC	5 cut(s)	137, 281, 319, 931, 1206
Hin1II	CATG	8 cut(s)	30, 76, 335, 436, 517, 690, 850, 1246
Hin6I	GCGC	5 cut(s)	135, 279, 317, 929, 1204
HinP1I	GCGC	5 cut(s)	135, 279, 317, 929, 1204
HincII	GTYRAC	3 cut(s)	565, 780, 1313
HindII	GTYRAC	3 cut(s)	565, 780, 1313
HindIII	AAGCTT	1 cut(s)	1272
HinfI	GANTC	6 cut(s)	208, 288, 297, 696, 824, 1181
HpaII	CCGG	4 cut(s)	114, 138, 818, 970
HphI	GGTGA	4 cut(s)	502, 793, 1472, 1601
Hpy166II	GTNNAC	5 cut(s)	565, 780, 801, 1196, 1313
Hpy188I	TCNGA	8 cut(s)	285, 384, 412, 546, 857, 1405, 1469, 1498
Hpy188III	TCNNGA	8 cut(s)	233, 254, 433, 896, 1039, 1148, 1178, 1323
Hpy8I	GTNNAC	5 cut(s)	565, 780, 801, 1196, 1313
Hpy99I	CGWCG	1 cut(s)	1314
HpyAV	CCTTC	9 cut(s)	145, 541, 582, 662, 722, 766, 1117, 1485, 1580
HpyCH4III	ACNGT	3 cut(s)	67, 749, 1118
HpyF3I	CTNAG	6 cut(s)	231, 282, 614, 634, 881, 1362
Hsp92II	CATG	8 cut(s)	30, 76, 335, 436, 517, 690, 850, 1246
HspAI	GCGC	5 cut(s)	135, 279, 317, 929, 1204
KroI	GCCGGC	1 cut(s)	137
KroNI	GCCGGC	1 cut(s)	139
Ksp22I	TGATCA	2 cut(s)	418, 1450
Kzo9I	GATC	8 cut(s)	98, 120, 379, 407, 418, 541, 1256, 1450
LmnI	GCTCC	5 cut(s)	256, 453, 718, 991, 1078
Lsp1109I	GCAGC	7 cut(s)	177, 292, 295, 708, 1072, 1336, 1396
LweI	GCATC	9 cut(s)	435, 484, 856, 1207, 1372, 1396, 1495, 1502, 1540
MaeI	CTAG	3 cut(s)	216, 1485, 1538
MaeIII	GTNAC	1 cut(s)	1576
MalI	GATC	8 cut(s)	100, 122, 381, 409, 420, 543, 1258, 1452
MboI	GATC	8 cut(s)	98, 120, 379, 407, 418, 541, 1256, 1450
MboII	GAAGA	9 cut(s)	95, 368, 389, 691, 971, 1033, 1113, 1152, 1544
MfeI	CAATTG	3 cut(s)	58, 351, 467
MhlI	GDGCHC	5 cut(s)	72, 114, 232, 510, 880
MlyI	GAGTC	3 cut(s)	282, 306, 690
MmeI	TCCRAC	2 cut(s)	126, 1447
MnlI	CCTC	8 cut(s)	37, 79, 229, 514, 517, 876, 1280, 1357
Mph1103I	ATGCAT	2 cut(s)	499, 1495
MroNI	GCCGGC	1 cut(s)	137
MseI	TTAA	3 cut(s)	192, 474, 987
MslI	CAYNNNNRTG	2 cut(s)	336, 456
MspA1I	CMGCKG	2 cut(s)	424, 1628
MspI	CCGG	4 cut(s)	114, 138, 818, 970
MspR9I	CCNGG	1 cut(s)	114
MunI	CAATTG	3 cut(s)	58, 351, 467
MvnI	CGCG	1 cut(s)	279
NaeI	GCCGGC	1 cut(s)	139
NciI	CCSGG	1 cut(s)	114
NcoI	CCATGG	1 cut(s)	513
NdeII	GATC	8 cut(s)	98, 120, 379, 407, 418, 541, 1256, 1450
NgoMIV	GCCGGC	1 cut(s)	137
NlaIII	CATG	8 cut(s)	30, 76, 335, 436, 517, 690, 850, 1246
NlaIV	GGNNCC	3 cut(s)	69, 816, 1332
NmeAIII	GCCGAG	1 cut(s)	167
NsbI	TGCGCA	1 cut(s)	930
NsiI	ATGCAT	2 cut(s)	499, 1495
NspI	RCATGY	1 cut(s)	335
PaeR7I	CTCGAG	1 cut(s)	294
PagI	TCATGA	1 cut(s)	432
PdiI	GCCGGC	1 cut(s)	139
PfeI	GAWTC	3 cut(s)	208, 824, 1181
PkrI	GCNGC	8 cut(s)	167, 307, 310, 723, 975, 1087, 1351, 1411
PleI	GAGTC	3 cut(s)	282, 305, 690
PpsI	GAGTC	3 cut(s)	282, 305, 690
PspFI	CCCAGC	1 cut(s)	804
PspN4I	GGNNCC	3 cut(s)	69, 816, 1332
PspPI	GGNCC	2 cut(s)	439, 1297
PspXI	VCTCGAGB	1 cut(s)	294
PstI	CTGCAG	1 cut(s)	1378
PstNI	CAGNNNCTG	1 cut(s)	259
RsaI	GTAC	5 cut(s)	372, 399, 1009, 1239, 1607
RsaNI	GTAC	5 cut(s)	371, 398, 1008, 1238, 1606
RseI	CAYNNNNRTG	2 cut(s)	336, 456
SalI	GTCGAC	1 cut(s)	1311
SaqAI	TTAA	3 cut(s)	192, 474, 987
SatI	GCNGC	8 cut(s)	166, 306, 309, 722, 974, 1086, 1350, 1410
Sau3AI	GATC	8 cut(s)	98, 120, 379, 407, 418, 541, 1256, 1450
Sau96I	GGNCC	2 cut(s)	439, 1297
ScaI	AGTACT	2 cut(s)	372, 1607
SchI	GAGTC	3 cut(s)	282, 306, 690
ScrFI	CCNGG	1 cut(s)	114
SduI	GDGCHC	5 cut(s)	72, 114, 232, 510, 880
SfaNI	GCATC	9 cut(s)	435, 484, 856, 1207, 1372, 1396, 1495, 1502, 1540
SfcI	CTRYAG	1 cut(s)	1374
Sfr274I	CTCGAG	1 cut(s)	294
SinI	GGWCC	1 cut(s)	1297
SlaI	CTCGAG	1 cut(s)	294
SmiMI	CAYNNNNRTG	2 cut(s)	336, 456
SmlI	CTYRAG	2 cut(s)	294, 653
SmoI	CTYRAG	2 cut(s)	294, 653
SsiI	CCGC	6 cut(s)	32, 424, 973, 1265, 1279, 1628
SspMI	CTAG	3 cut(s)	216, 1485, 1538
StyD4I	CCNGG	1 cut(s)	112
StyI	CCWWGG	1 cut(s)	513
TaaI	ACNGT	3 cut(s)	67, 749, 1118
TatI	WGTACW	3 cut(s)	370, 397, 1605
TauI	GCSGC	1 cut(s)	976
TfiI	GAWTC	3 cut(s)	208, 824, 1181
Tru1I	TTAA	3 cut(s)	192, 474, 987
Tru9I	TTAA	3 cut(s)	192, 474, 987
TscAI	CASTG	6 cut(s)	642, 754, 885, 913, 1123, 1564
TseI	GCWGC	7 cut(s)	165, 305, 308, 721, 1085, 1349, 1409
TspDTI	ATGAA	4 cut(s)	333, 785, 837, 996
TspGWI	ACGGA	1 cut(s)	1298
TspRI	CASTG	6 cut(s)	642, 754, 885, 913, 1123, 1564
VpaK11BI	GGWCC	1 cut(s)	1297
XapI	RAATTY	4 cut(s)	172, 1156, 1426, 1621
XceI	RCATGY	1 cut(s)	335
XhoI	CTCGAG	1 cut(s)	294
XmiI	GTMKAC	1 cut(s)	1312
XspI	CTAG	3 cut(s)	216, 1485, 1538
ZrmI	AGTACT	2 cut(s)	372, 1607
Zsp2I	ATGCAT	2 cut(s)	499, 1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.