FvH4_1g08150

Prolyl oligopeptidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0013157
Physical Location & Seq
Reverse (-)
4313835 .. 4317327
3493 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08150.t1

Sequence Viewer

Length: 948 bp
ATGGTGTCGTACATGAACGCGTTGCTGTACGGCGTCGGAGGCATCGTCGTCGCCGGCATGGCTCTACTGGTGGCTCTCCAGGAACGACTCGTCTACGTGCCGGTCCTACCGGGGCTGACCAAGTCTTACCAGATTACGCCGGCCCGGCTCCGACTCACCTACGAGGACGTCTGGCTCCGATCCCCGGACGGCGTTCGCCTCCACGCCTGGTTCATCAAGCTCTTCCCTGACTGCCGAGGTCCGACGCTTTTGTTTTTCCAAGAGAATGCTGGAAATATTGCGCATCGTCTTGAAATGGTTCGCATAATGTTGCAAAAGTTGCAGTGTAACGTGTTTATGCTCTCATATCGAGGGTATGGAGCAAGTGACGGATTTCCTTCTCAACATGGAATTATTAAAGATGCTCAGGCTGCGTTGGATCATCTTTCTGAGAGGACTGACATTGACACATCTAGAATAGTTGTCTTCGGAAGGTCGCTTGGGGGTGCAGTTGGATCTGTGGTTGCTAAAAACAATCCTGATAAGGTTGCTGCATTGATTGTTGAAAACACCTTCACATCCATTTTGGACATGGCTGGAGTTTTGCTGCCCTTCCTGAAGTATTTTATCGGAGGCAGTGGTTGCAAAGGTCCCAAAATCCTTAATTTCCTCGTGCGTTCTCCTTGGAGTACAATCGATGTCATTGGCGAGGTTAAGCAGCCGATCCTATTTCTCTCTGGTTTGCAAGACGAGATGATTCCCCCGGTCCACATGCATATGCTGTATGCAAAAGCAGCTGCTCATAATAGGCAATGTGTTTTTGTGGAATTTCCTAATGGTATGCATATGGATACTTGGCTCTCAGGTGGTGATCAATATTGGAGAACAATCAAGGAGTTTCTAAAAGAGCATGTTCCAGAGGGACGAGATGATGAATCATCAAAGACTGCAGTTAAAAGCTCTATTTGA

Protein Analysis

316

Amino Acids

35.0

Weight (kDa)

8.27

Isoelectric Point (pI)

37.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 104 - 190 6.9e-09 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 104 - 193 6e-08 alpha/beta hydrolase fold
DLH PF01738 130 - 275 4.6e-06 Dienelactone hydrolase family
Peptidase_S9 PF00326 132 - 296 2.3e-12 Prolyl oligopeptidase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20520
fragaria_vesca FvH4_1g08150 FvH4_1g08150
malus_domestica MD02G1086100.v1.1 MD15G1213300.v1.1
prunus_persica Prupe.7G203600_v2.0.a1 Prupe.7G203600_v2.0.a1
pyrus_communis pycom02g06930 pycom15g18970
rosa_chinensis RchiOBHm_Chr2g0094221
rosa_laevigata RLG00000016467
rosa_multiflora Rmu_sc0002193.1_g000008
rosa_roxburghii Rroxscaffold_2G00147360
rosa_rugosa Rorug02G0041900
rosa_samantha Rh2AG089700 Rh2BG089800 Rh2CG092300 Rh2DG088600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 171
Acc16I TGCGCA 1 cut(s) 282
AccI GTMKAC 1 cut(s) 93
AccII CGCG 1 cut(s) 20
AclWI GGATC 4 cut(s) 174, 426, 502, 697
AcsI RAATTY 1 cut(s) 806
AcuI CTGAAG 1 cut(s) 617
AcyI GRCGYC 2 cut(s) 33, 168
AfaI GTAC 3 cut(s) 11, 29, 670
AfiI CCNNNNNNNGG 1 cut(s) 184
AflIII ACRYGT 2 cut(s) 18, 330
AgsI TTSAA 2 cut(s) 293, 545
AjnI CCWGG 2 cut(s) 78, 206
AluBI AGCT 3 cut(s) 220, 776, 939
AluI AGCT 3 cut(s) 220, 776, 939
AlwI GGATC 4 cut(s) 174, 426, 502, 697
AoxI GGCC 1 cut(s) 141
ApeKI GCWGC 6 cut(s) 410, 530, 586, 697, 773, 776
ApoI RAATTY 1 cut(s) 806
Asp700I GAANNNNTTC 1 cut(s) 297
AspLEI GCGC 1 cut(s) 283
AspS9I GGNCC 5 cut(s) 103, 142, 239, 629, 745
AsuC2I CCSGG 4 cut(s) 111, 145, 185, 743
AsuHPI GGTGA 2 cut(s) 148, 860
AvaII GGWCC 4 cut(s) 103, 239, 629, 745
BauI CACGAG 1 cut(s) 650
BbsI GAAGAC 1 cut(s) 457
BbvI GCAGC 6 cut(s) 397, 517, 573, 709, 763, 785
BceAI ACGGC 2 cut(s) 46, 205
BcgI CGANNNNNNTGC 2 cut(s) 31, 65
BciT130I CCWGG 2 cut(s) 80, 208
BciVI GTATCC 1 cut(s) 823
BclI TGATCA 1 cut(s) 850
BcnI CCSGG 4 cut(s) 111, 145, 185, 743
BfaI CTAG 1 cut(s) 453
BfmI CTRYAG 1 cut(s) 927
BfuI GTATCC 1 cut(s) 823
BglI GCCNNNNNGGC 2 cut(s) 59, 145
BisI GCNGC 6 cut(s) 411, 531, 587, 698, 774, 777
BlsI GCNGC 6 cut(s) 412, 532, 588, 699, 775, 778
Bme1390I CCNGG 6 cut(s) 80, 111, 145, 185, 208, 743
Bme18I GGWCC 4 cut(s) 103, 239, 629, 745
BmgT120I GGNCC 5 cut(s) 103, 142, 239, 629, 745
BmiI GGNNCC 3 cut(s) 149, 176, 631
BmrFI CCNGG 6 cut(s) 80, 111, 145, 185, 208, 743
BmsI GCATC 3 cut(s) 51, 292, 391
BpiI GAAGAC 1 cut(s) 457
BpmI CTGGAG 2 cut(s) 62, 597
Bpu10I CCTNAGC 1 cut(s) 405
BpuMI CCSGG 4 cut(s) 111, 145, 185, 743
Bsa29I ATCGAT 1 cut(s) 675
BsaAI YACGTR 1 cut(s) 97
BsaHI GRCGYC 2 cut(s) 33, 168
BsaJI CCNNGG 5 cut(s) 110, 183, 235, 662, 741
BsaXI ACNNNNNCTCC 2 cut(s) 30, 60
Bsc4I CCNNNNNNNGG 1 cut(s) 184
Bse118I RCCGGY 3 cut(s) 53, 100, 139
Bse1I ACTGG 1 cut(s) 72
Bse3DI GCAATG 1 cut(s) 797
BseBI CCWGG 2 cut(s) 80, 208
BseCI ATCGAT 1 cut(s) 675
BseDI CCNNGG 5 cut(s) 110, 183, 235, 662, 741
BseGI GGATG 1 cut(s) 557
BseLI CCNNNNNNNGG 1 cut(s) 184
BseMI GCAATG 1 cut(s) 797
BseMII CTCAG 3 cut(s) 419, 420, 855
BseNI ACTGG 1 cut(s) 72
BseXI GCAGC 6 cut(s) 397, 517, 573, 709, 763, 785
BsgI GTGCAG 1 cut(s) 507
Bsh1236I CGCG 1 cut(s) 20
BshFI GGCC 1 cut(s) 143
BshVI ATCGAT 1 cut(s) 675
BsiSI CCGG 7 cut(s) 54, 101, 110, 140, 145, 185, 743
BslFI GGGAC 2 cut(s) 615, 915
BslI CCNNNNNNNGG 1 cut(s) 184
BsmFI GGGAC 2 cut(s) 615, 915
BsmI GAATGC 1 cut(s) 271
BsnI GGCC 1 cut(s) 143
Bsp143I GATC 5 cut(s) 179, 418, 494, 702, 850
BspANI GGCC 1 cut(s) 143
BspCNI CTCAG 3 cut(s) 418, 421, 854
BspDI ATCGAT 1 cut(s) 675
BspFNI CGCG 1 cut(s) 20
BspLI GGNNCC 3 cut(s) 149, 176, 631
BspMAI CTGCAG 1 cut(s) 931
BspPI GGATC 4 cut(s) 174, 426, 502, 697
BspQI GCTCTTC 1 cut(s) 227
BsrDI GCAATG 1 cut(s) 797
BsrFI RCCGGY 3 cut(s) 53, 100, 139
BsrI ACTGG 1 cut(s) 72
BssAI RCCGGY 3 cut(s) 53, 100, 139
BssECI CCNNGG 5 cut(s) 110, 183, 235, 662, 741
BssMI GATC 5 cut(s) 179, 418, 494, 702, 850
BssNI GRCGYC 2 cut(s) 33, 168
BssSI CACGAG 1 cut(s) 650
BssT1I CCWWGG 1 cut(s) 662
Bst2BI CACGAG 1 cut(s) 650
Bst2UI CCWGG 2 cut(s) 80, 208
Bst6I CTCTTC 1 cut(s) 227
BstACI GRCGYC 2 cut(s) 33, 168
BstAPI GCANNNNNTGC 2 cut(s) 319, 621
BstBAI YACGTR 1 cut(s) 97
BstC8I GCNNGC 2 cut(s) 55, 141
BstDEI CTNAG 3 cut(s) 405, 429, 841
BstF5I GGATG 1 cut(s) 557
BstFNI CGCG 1 cut(s) 20
BstHHI GCGC 1 cut(s) 283
BstKTI GATC 5 cut(s) 182, 421, 497, 705, 853
BstMBI GATC 5 cut(s) 179, 418, 494, 702, 850
BstMWI GCNNNNNNNGC 7 cut(s) 39, 59, 145, 319, 410, 621, 773
BstNI CCWGG 2 cut(s) 80, 208
BstNSI RCATGY 2 cut(s) 754, 893
BstSCI CCNGG 6 cut(s) 78, 109, 143, 183, 206, 741
BstSFI CTRYAG 1 cut(s) 927
BstUI CGCG 1 cut(s) 20
BstV1I GCAGC 6 cut(s) 397, 517, 573, 709, 763, 785
BstV2I GAAGAC 1 cut(s) 457
BstX2I RGATCY 1 cut(s) 494
BstYI RGATCY 1 cut(s) 494
Bsu15I ATCGAT 1 cut(s) 675
BsuI GTATCC 1 cut(s) 823
BsuRI GGCC 1 cut(s) 143
BsuTUI ATCGAT 1 cut(s) 675
BtsCI GGATG 1 cut(s) 557
BtsI GCAGTG 2 cut(s) 329, 622
BtsIMutI CAGTG 2 cut(s) 329, 622
Cac8I GCNNGC 2 cut(s) 55, 141
CfoI GCGC 1 cut(s) 283
Cfr10I RCCGGY 3 cut(s) 53, 100, 139
Cfr13I GGNCC 5 cut(s) 103, 142, 239, 629, 745
ClaI ATCGAT 1 cut(s) 675
CseI GACGC 2 cut(s) 22, 253
Csp6I GTAC 3 cut(s) 10, 28, 669
CviAII CATG 6 cut(s) 13, 58, 386, 571, 751, 890
CviQI GTAC 3 cut(s) 10, 28, 669
DdeI CTNAG 3 cut(s) 405, 429, 841
DpnI GATC 5 cut(s) 181, 420, 496, 704, 852
DpnII GATC 5 cut(s) 179, 418, 494, 702, 850
Eam1104I CTCTTC 1 cut(s) 227
EarI CTCTTC 1 cut(s) 227
Eco130I CCWWGG 1 cut(s) 662
Eco47I GGWCC 4 cut(s) 103, 239, 629, 745
Eco57I CTGAAG 1 cut(s) 617
EcoO109I RGGNCCY 1 cut(s) 629
EcoRII CCWGG 2 cut(s) 78, 206
EcoT14I CCWWGG 1 cut(s) 662
EcoT22I ATGCAT 2 cut(s) 756, 825
ErhI CCWWGG 1 cut(s) 662
FaeI CATG 6 cut(s) 16, 61, 389, 574, 754, 893
FaqI GGGAC 2 cut(s) 615, 915
FatI CATG 6 cut(s) 12, 57, 385, 570, 750, 889
FauNDI CATATG 2 cut(s) 756, 825
FbaI TGATCA 1 cut(s) 850
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 6 cut(s) 411, 531, 587, 698, 774, 777
FokI GGATG 1 cut(s) 544
Fsp4HI GCNGC 6 cut(s) 411, 531, 587, 698, 774, 777
FspBI CTAG 1 cut(s) 453
FspI TGCGCA 1 cut(s) 282
GlaI GCGC 1 cut(s) 282
GluI GCNGC 6 cut(s) 411, 531, 587, 698, 774, 777
GsuI CTGGAG 2 cut(s) 62, 597
HaeIII GGCC 1 cut(s) 143
HapII CCGG 7 cut(s) 54, 101, 110, 140, 145, 185, 743
HgaI GACGC 2 cut(s) 22, 253
HhaI GCGC 1 cut(s) 283
Hin1I GRCGYC 2 cut(s) 33, 168
Hin1II CATG 6 cut(s) 16, 61, 389, 574, 754, 893
Hin6I GCGC 1 cut(s) 281
HinP1I GCGC 1 cut(s) 281
HinfI GANTC 4 cut(s) 87, 153, 736, 914
HpaII CCGG 7 cut(s) 54, 101, 110, 140, 145, 185, 743
HphI GGTGA 2 cut(s) 148, 860
Hpy166II GTNNAC 2 cut(s) 94, 748
Hpy188I TCNGA 7 cut(s) 38, 152, 179, 243, 430, 470, 611
Hpy188III TCNNGA 5 cut(s) 290, 453, 518, 595, 896
Hpy8I GTNNAC 2 cut(s) 94, 748
Hpy99I CGWCG 4 cut(s) 38, 50, 53, 247
HpyAV CCTTC 4 cut(s) 387, 465, 562, 601
HpyCH4IV ACGT 3 cut(s) 96, 168, 330
HpyF10VI GCNNNNNNNGC 7 cut(s) 39, 59, 145, 319, 410, 621, 773
HpyF3I CTNAG 3 cut(s) 405, 429, 841
HpySE526I ACGT 3 cut(s) 96, 168, 330
Hsp92I GRCGYC 2 cut(s) 33, 168
Hsp92II CATG 6 cut(s) 16, 61, 389, 574, 754, 893
HspAI GCGC 1 cut(s) 281
KroI GCCGGC 2 cut(s) 53, 139
KroNI GCCGGC 2 cut(s) 55, 141
Ksp22I TGATCA 1 cut(s) 850
Kzo9I GATC 5 cut(s) 179, 418, 494, 702, 850
LguI GCTCTTC 1 cut(s) 227
LmnI GCTCC 3 cut(s) 153, 180, 359
Lsp1109I GCAGC 6 cut(s) 397, 517, 573, 709, 763, 785
LweI GCATC 3 cut(s) 51, 292, 391
MaeI CTAG 1 cut(s) 453
MaeII ACGT 3 cut(s) 96, 168, 330
MaeIII GTNAC 2 cut(s) 326, 365
MalI GATC 5 cut(s) 181, 420, 496, 704, 852
MboI GATC 5 cut(s) 179, 418, 494, 702, 850
MboII GAAGA 2 cut(s) 214, 457
MflI RGATCY 1 cut(s) 494
MluCI AATT 3 cut(s) 390, 643, 806
MluI ACGCGT 1 cut(s) 18
MlyI GAGTC 2 cut(s) 81, 147
MmeI TCCRAC 5 cut(s) 16, 175, 266, 396, 472
Mph1103I ATGCAT 2 cut(s) 756, 825
MroNI GCCGGC 2 cut(s) 53, 139
MroXI GAANNNNTTC 1 cut(s) 297
MseI TTAA 4 cut(s) 396, 642, 693, 933
MslI CAYNNNNRTG 1 cut(s) 755
MspA1I CMGCKG 1 cut(s) 776
MspI CCGG 7 cut(s) 54, 101, 110, 140, 145, 185, 743
MspR9I CCNGG 6 cut(s) 80, 111, 145, 185, 208, 743
Mva1269I GAATGC 1 cut(s) 271
MvaI CCWGG 2 cut(s) 80, 208
MvnI CGCG 1 cut(s) 20
MwoI GCNNNNNNNGC 7 cut(s) 39, 59, 145, 319, 410, 621, 773
NaeI GCCGGC 2 cut(s) 55, 141
NciI CCSGG 4 cut(s) 111, 145, 185, 743
NdeI CATATG 2 cut(s) 756, 825
NdeII GATC 5 cut(s) 179, 418, 494, 702, 850
NgoMIV GCCGGC 2 cut(s) 53, 139
NlaIII CATG 6 cut(s) 16, 61, 389, 574, 754, 893
NlaIV GGNNCC 3 cut(s) 149, 176, 631
NmeAIII GCCGAG 1 cut(s) 260
NmuCI GTSAC 1 cut(s) 365
NsbI TGCGCA 1 cut(s) 282
NsiI ATGCAT 2 cut(s) 756, 825
NspI RCATGY 2 cut(s) 754, 893
PciSI GCTCTTC 1 cut(s) 227
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PctI GAATGC 1 cut(s) 271
PdiI GCCGGC 2 cut(s) 55, 141
PdmI GAANNNNTTC 1 cut(s) 297
PfeI GAWTC 2 cut(s) 736, 914
PflFI GACNNNGTC 1 cut(s) 121
PfoI TCCNGGA 1 cut(s) 78
PkrI GCNGC 6 cut(s) 412, 532, 588, 699, 775, 778
PleI GAGTC 2 cut(s) 81, 147
PpsI GAGTC 2 cut(s) 81, 147
Ppu21I YACGTR 1 cut(s) 97
PpuMI RGGWCCY 1 cut(s) 629
Psp5II RGGWCCY 1 cut(s) 629
Psp6I CCWGG 2 cut(s) 78, 206
PspGI CCWGG 2 cut(s) 78, 206
PspN4I GGNNCC 3 cut(s) 149, 176, 631
PspPI GGNCC 5 cut(s) 103, 142, 239, 629, 745
PspPPI RGGWCCY 1 cut(s) 629
PstI CTGCAG 1 cut(s) 931
PsuI RGATCY 1 cut(s) 494
PsyI GACNNNGTC 1 cut(s) 121
PvuII CAGCTG 1 cut(s) 776
RsaI GTAC 3 cut(s) 11, 29, 670
RsaNI GTAC 3 cut(s) 10, 28, 669
RseI CAYNNNNRTG 1 cut(s) 755
SapI GCTCTTC 1 cut(s) 227
SaqAI TTAA 4 cut(s) 396, 642, 693, 933
SatI GCNGC 6 cut(s) 411, 531, 587, 698, 774, 777
Sau3AI GATC 5 cut(s) 179, 418, 494, 702, 850
Sau96I GGNCC 5 cut(s) 103, 142, 239, 629, 745
SchI GAGTC 2 cut(s) 81, 147
ScrFI CCNGG 6 cut(s) 80, 111, 145, 185, 208, 743
SfaNI GCATC 3 cut(s) 51, 292, 391
SfcI CTRYAG 1 cut(s) 927
SinI GGWCC 4 cut(s) 103, 239, 629, 745
SmiMI CAYNNNNRTG 1 cut(s) 755
Sse9I AATT 3 cut(s) 390, 643, 806
SspI AATATT 2 cut(s) 277, 857
SspMI CTAG 1 cut(s) 453
StyD4I CCNGG 6 cut(s) 78, 109, 143, 183, 206, 741
StyI CCWWGG 1 cut(s) 662
TaiI ACGT 3 cut(s) 99, 171, 333
TaqI TCGA 2 cut(s) 349, 675
TasI AATT 3 cut(s) 390, 643, 806
TatI WGTACW 1 cut(s) 668
TfiI GAWTC 2 cut(s) 736, 914
Tru1I TTAA 4 cut(s) 396, 642, 693, 933
Tru9I TTAA 4 cut(s) 396, 642, 693, 933
TscAI CASTG 2 cut(s) 329, 622
TseFI GTSAC 1 cut(s) 365
TseI GCWGC 6 cut(s) 410, 530, 586, 697, 773, 776
Tsp45I GTSAC 1 cut(s) 365
TspDTI ATGAA 3 cut(s) 29, 202, 927
TspGWI ACGGA 1 cut(s) 384
TspRI CASTG 2 cut(s) 329, 622
Tth111I GACNNNGTC 1 cut(s) 121
VpaK11BI GGWCC 4 cut(s) 103, 239, 629, 745
XapI RAATTY 1 cut(s) 806
XbaI TCTAGA 1 cut(s) 452
XceI RCATGY 2 cut(s) 754, 893
XcmI CCANNNNNNNNNTGG 2 cut(s) 266, 568
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 297
XspI CTAG 1 cut(s) 453
ZraI GACGTC 1 cut(s) 169
Zsp2I ATGCAT 2 cut(s) 756, 825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.