pycom02g06930

Prolyl oligopeptidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0013157
Physical Location & Seq
Reverse (-)
4800661 .. 4803001
2341 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g06930.4

Sequence Viewer

Length: 999 bp
ATGGTGTCGTACGTGAGCGCGCTGATGTACGGAGTGGGAGGCCTAGTGGTGGCCGGCATGGCATTGCTCGTCGCCCTCCAGGAGCGCCTCGTCTACGTCCCCGTCTTGCCGGGTCTCACCAAGTCCTACCCGATTACCCCCGCCCGCCTCCGCCTCACTTACGAGGACGTCTGGCTCCAGTCCTCCGACGGCGTTCGCCTCCACGCTTGGTTCATCAAGCTCTTCCCCCTCTGCCGAGGTCCAACCCTATTGTTTTTCCAAGAAAATGCTGGAAATATTGCTCATCGTCTTGAAATGGTCCGCATAATGTTACAAAAACTGCAATGCAACGTGTTTATGCTTTCATATCGAGGTTATGGAGCAAGTGAAGGATATCCTTCTCAGCACGGGATCATAAAAGATGCTCAGGTTGCATTGGATCACCTATCGCAGAGGACTGACATTGACACATCTAGAATAGTTGTCTTTGGAAGGTCACTTGGGGGTGCAGTTGGAACTGTGGTTGCTAAAAACAACCCTGATAAGGTTGCTGCACTGATACTGGAAAACACTTTCACATCTGTTTTGGACTTGGCTGGAGTTTTATTTCCTTTCTTGAAGTGGTTCATTGGAGGCAGTGGTTCAAAAGGTCCTAAAGTACTTAATTTTCTCGTACGTTCTCCTTGGAGTACAATTGATGTCATTGGTGAGGTTAAGCAGCCAATCCTCTTTCTATCTGGCTTGCAAGATGAGATGGTTCCTCCATCCCATTTGCAAATGCTGTATGCCAAAGCAGCTGCCCGTAATAAGCAGTGTGTTTTTGTGGAATTTCCCACTGGCATGCATATGGATACTTGGCTTGCTGGTGGTGACGATTATTGGAGAACGGTCCAGGAGTTTCTTCAACAACATGTTCCAGCGAAAAAAGATAATGAATCCTCTCACAGTAATAGCGGTAAGTTTTGGTTAATGGAGTCTTCCAAATTCTTTACACACATACAGGGCACACACAAAAGTTGA

Protein Analysis

333

Amino Acids

36.92

Weight (kDa)

9.01

Isoelectric Point (pI)

42.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20520
fragaria_vesca FvH4_1g08150 FvH4_1g08150
malus_domestica MD02G1086100.v1.1 MD15G1213300.v1.1
prunus_persica Prupe.7G203600_v2.0.a1 Prupe.7G203600_v2.0.a1
pyrus_communis pycom02g06930 pycom15g18970
rosa_chinensis RchiOBHm_Chr2g0094221
rosa_laevigata RLG00000016467
rosa_multiflora Rmu_sc0002193.1_g000008
rosa_roxburghii Rroxscaffold_2G00147360
rosa_rugosa Rorug02G0041900
rosa_samantha Rh2AG089700 Rh2BG089800 Rh2CG092300 Rh2DG088600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 171
AccI GTMKAC 1 cut(s) 93
AccII CGCG 1 cut(s) 20
AciI CCGC 5 cut(s) 141, 145, 151, 301, 933
AclWI GGATC 2 cut(s) 398, 426
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 2 cut(s) 806, 962
AcyI GRCGYC 1 cut(s) 168
AfaI GTAC 5 cut(s) 11, 29, 639, 654, 670
AfiI CCNNNNNNNGG 2 cut(s) 49, 523
AflIII ACRYGT 2 cut(s) 330, 889
AgsI TTSAA 4 cut(s) 293, 598, 624, 884
AjnI CCWGG 2 cut(s) 78, 870
AluBI AGCT 2 cut(s) 220, 776
AluI AGCT 2 cut(s) 220, 776
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 2 cut(s) 398, 426
AoxI GGCC 2 cut(s) 40, 51
ApeKI GCWGC 4 cut(s) 530, 697, 773, 776
ApoI RAATTY 2 cut(s) 806, 962
Asp700I GAANNNNTTC 1 cut(s) 602
AspLEI GCGC 3 cut(s) 20, 22, 87
AspS9I GGNCC 4 cut(s) 239, 298, 629, 868
AsuC2I CCSGG 1 cut(s) 111
AsuHPI GGTGA 4 cut(s) 109, 413, 698, 860
AvaII GGWCC 4 cut(s) 239, 298, 629, 868
BaeGI GKGCMC 1 cut(s) 986
BbsI GAAGAC 1 cut(s) 948
BbvI GCAGC 4 cut(s) 517, 709, 763, 785
BccI CCATC 2 cut(s) 727, 751
BceAI ACGGC 1 cut(s) 205
BciT130I CCWGG 2 cut(s) 80, 872
BciVI GTATCC 1 cut(s) 823
BcnI CCSGG 1 cut(s) 111
BcoDI GTCTC 1 cut(s) 119
BfaI CTAG 2 cut(s) 44, 453
BfoI RGCGCY 1 cut(s) 88
BfuI GTATCC 1 cut(s) 823
BglI GCCNNNNNGGC 1 cut(s) 59
BisI GCNGC 4 cut(s) 531, 698, 774, 777
BlsI GCNGC 4 cut(s) 532, 699, 775, 778
BmcAI AGTACT 1 cut(s) 639
Bme1390I CCNGG 3 cut(s) 80, 111, 872
Bme18I GGWCC 4 cut(s) 239, 298, 629, 868
BmgT120I GGNCC 4 cut(s) 239, 298, 629, 868
BmiI GGNNCC 2 cut(s) 176, 738
BmrFI CCNGG 3 cut(s) 80, 111, 872
BmsI GCATC 1 cut(s) 391
BpiI GAAGAC 1 cut(s) 948
BpmI CTGGAG 3 cut(s) 62, 161, 597
Bpu10I CCTNAGC 1 cut(s) 405
BpuMI CCSGG 1 cut(s) 111
BsaAI YACGTR 1 cut(s) 13
BsaHI GRCGYC 1 cut(s) 168
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 2 cut(s) 235, 662
BsaXI ACNNNNNCTCC 2 cut(s) 30, 60
Bsc4I CCNNNNNNNGG 2 cut(s) 49, 523
Bse118I RCCGGY 1 cut(s) 53
Bse1I ACTGG 3 cut(s) 178, 546, 820
Bse3DI GCAATG 2 cut(s) 62, 329
BseBI CCWGG 2 cut(s) 80, 872
BseDI CCNNGG 2 cut(s) 235, 662
BseGI GGATG 1 cut(s) 743
BseLI CCNNNNNNNGG 2 cut(s) 49, 523
BseMI GCAATG 2 cut(s) 62, 329
BseMII CTCAG 2 cut(s) 395, 419
BseNI ACTGG 3 cut(s) 178, 546, 820
BsePI GCGCGC 1 cut(s) 18
BseSI GKGCMC 1 cut(s) 986
BseXI GCAGC 4 cut(s) 517, 709, 763, 785
BsgI GTGCAG 2 cut(s) 507, 516
Bsh1236I CGCG 1 cut(s) 20
BshFI GGCC 2 cut(s) 42, 53
BsiSI CCGG 2 cut(s) 54, 110
BsiWI CGTACG 2 cut(s) 9, 652
BslFI GGGAC 1 cut(s) 83
BslI CCNNNNNNNGG 2 cut(s) 49, 523
BsmAI GTCTC 1 cut(s) 119
BsmFI GGGAC 1 cut(s) 83
BsnI GGCC 2 cut(s) 42, 53
Bso31I GGTCTC 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 986
Bsp143I GATC 2 cut(s) 390, 418
BspACI CCGC 5 cut(s) 141, 145, 151, 301, 933
BspANI GGCC 2 cut(s) 42, 53
BspCNI CTCAG 2 cut(s) 394, 418
BspFNI CGCG 1 cut(s) 20
BspLI GGNNCC 2 cut(s) 176, 738
BspPI GGATC 2 cut(s) 398, 426
BspQI GCTCTTC 1 cut(s) 227
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 2 cut(s) 62, 329
BsrFI RCCGGY 1 cut(s) 53
BsrI ACTGG 3 cut(s) 178, 546, 820
BssAI RCCGGY 1 cut(s) 53
BssECI CCNNGG 2 cut(s) 235, 662
BssHII GCGCGC 1 cut(s) 18
BssMI GATC 2 cut(s) 390, 418
BssNI GRCGYC 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 662
Bst2UI CCWGG 2 cut(s) 80, 872
Bst4CI ACNGT 3 cut(s) 499, 868, 926
Bst6I CTCTTC 1 cut(s) 227
BstACI GRCGYC 1 cut(s) 168
BstBAI YACGTR 1 cut(s) 13
BstC8I GCNNGC 6 cut(s) 20, 55, 145, 722, 821, 840
BstDEI CTNAG 2 cut(s) 381, 405
BstF5I GGATG 1 cut(s) 743
BstFNI CGCG 1 cut(s) 20
BstH2I RGCGCY 1 cut(s) 88
BstHHI GCGC 3 cut(s) 20, 22, 87
BstKTI GATC 2 cut(s) 393, 421
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 2 cut(s) 390, 418
BstMWI GCNNNNNNNGC 3 cut(s) 59, 410, 773
BstNI CCWGG 2 cut(s) 80, 872
BstNSI RCATGY 2 cut(s) 823, 893
BstSCI CCNGG 3 cut(s) 78, 109, 870
BstSLI GKGCMC 1 cut(s) 986
BstUI CGCG 1 cut(s) 20
BstV1I GCAGC 4 cut(s) 517, 709, 763, 785
BstV2I GAAGAC 1 cut(s) 948
BsuI GTATCC 1 cut(s) 823
BsuRI GGCC 2 cut(s) 42, 53
BtsCI GGATG 1 cut(s) 743
BtsI GCAGTG 2 cut(s) 622, 797
BtsIMutI CAGTG 4 cut(s) 533, 622, 797, 813
Cac8I GCNNGC 6 cut(s) 20, 55, 145, 722, 821, 840
CfoI GCGC 3 cut(s) 20, 22, 87
Cfr10I RCCGGY 1 cut(s) 53
Cfr13I GGNCC 4 cut(s) 239, 298, 629, 868
Csp6I GTAC 5 cut(s) 10, 28, 638, 653, 669
CviAII CATG 3 cut(s) 58, 820, 890
CviJI RGCY 9 cut(s) 42, 53, 175, 220, 575, 700, 720, 776, 838
CviKI_1 RGCY 9 cut(s) 42, 53, 175, 220, 575, 700, 720, 776, 838
CviQI GTAC 5 cut(s) 10, 28, 638, 653, 669
DdeI CTNAG 2 cut(s) 381, 405
DpnI GATC 2 cut(s) 392, 420
DpnII GATC 2 cut(s) 390, 418
EaeI YGGCCR 1 cut(s) 51
Eam1104I CTCTTC 1 cut(s) 227
EarI CTCTTC 1 cut(s) 227
EciI GGCGGA 1 cut(s) 140
Eco130I CCWWGG 1 cut(s) 662
Eco147I AGGCCT 1 cut(s) 42
Eco31I GGTCTC 1 cut(s) 119
Eco32I GATATC 1 cut(s) 374
Eco47I GGWCC 4 cut(s) 239, 298, 629, 868
EcoO109I RGGNCCY 1 cut(s) 629
EcoRII CCWGG 2 cut(s) 78, 870
EcoRV GATATC 1 cut(s) 374
EcoT14I CCWWGG 1 cut(s) 662
EcoT22I ATGCAT 1 cut(s) 825
ErhI CCWWGG 1 cut(s) 662
FaeI CATG 3 cut(s) 61, 823, 893
FaqI GGGAC 1 cut(s) 83
FatI CATG 3 cut(s) 57, 819, 889
FauI CCCGC 2 cut(s) 148, 152
FauNDI CATATG 1 cut(s) 825
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 4 cut(s) 531, 698, 774, 777
FokI GGATG 1 cut(s) 730
Fsp4HI GCNGC 4 cut(s) 531, 698, 774, 777
FspBI CTAG 2 cut(s) 44, 453
GlaI GCGC 3 cut(s) 19, 21, 86
GluI GCNGC 4 cut(s) 531, 698, 774, 777
GsuI CTGGAG 3 cut(s) 62, 161, 597
HaeII RGCGCY 1 cut(s) 88
HaeIII GGCC 2 cut(s) 42, 53
HapII CCGG 2 cut(s) 54, 110
HhaI GCGC 3 cut(s) 20, 22, 87
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 3 cut(s) 61, 823, 893
Hin6I GCGC 3 cut(s) 18, 20, 85
HinP1I GCGC 3 cut(s) 18, 20, 85
HinfI GANTC 2 cut(s) 914, 953
HpaII CCGG 2 cut(s) 54, 110
HphI GGTGA 4 cut(s) 109, 413, 698, 860
Hpy166II GTNNAC 1 cut(s) 94
Hpy188I TCNGA 1 cut(s) 187
Hpy188III TCNNGA 3 cut(s) 290, 453, 595
Hpy8I GTNNAC 1 cut(s) 94
Hpy99I CGWCG 2 cut(s) 74, 191
HpyAV CCTTC 3 cut(s) 362, 387, 465
HpyCH4III ACNGT 3 cut(s) 499, 868, 926
HpyCH4IV ACGT 5 cut(s) 12, 96, 168, 330, 655
HpyCH4V TGCA 8 cut(s) 322, 327, 413, 488, 533, 724, 754, 823
HpyF10VI GCNNNNNNNGC 3 cut(s) 59, 410, 773
HpyF3I CTNAG 2 cut(s) 381, 405
HpySE526I ACGT 5 cut(s) 12, 96, 168, 330, 655
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 3 cut(s) 61, 823, 893
HspAI GCGC 3 cut(s) 18, 20, 85
KroI GCCGGC 1 cut(s) 53
KroNI GCCGGC 1 cut(s) 55
Kzo9I GATC 2 cut(s) 390, 418
LguI GCTCTTC 1 cut(s) 227
LmnI GCTCC 3 cut(s) 82, 180, 359
Lsp1109I GCAGC 4 cut(s) 517, 709, 763, 785
LweI GCATC 1 cut(s) 391
MaeI CTAG 2 cut(s) 44, 453
MaeII ACGT 5 cut(s) 12, 96, 168, 330, 655
MaeIII GTNAC 3 cut(s) 309, 474, 848
MalI GATC 2 cut(s) 392, 420
MboI GATC 2 cut(s) 390, 418
MboII GAAGA 3 cut(s) 214, 872, 948
MfeI CAATTG 1 cut(s) 672
MhlI GDGCHC 1 cut(s) 986
MluCI AATT 4 cut(s) 643, 672, 806, 962
MlyI GAGTC 1 cut(s) 962
MmeI TCCRAC 3 cut(s) 210, 266, 472
Mph1103I ATGCAT 1 cut(s) 825
MroNI GCCGGC 1 cut(s) 53
MroXI GAANNNNTTC 1 cut(s) 602
MseI TTAA 3 cut(s) 642, 693, 947
MslI CAYNNNNRTG 2 cut(s) 818, 824
MspA1I CMGCKG 1 cut(s) 776
MspI CCGG 2 cut(s) 54, 110
MspR9I CCNGG 3 cut(s) 80, 111, 872
MunI CAATTG 1 cut(s) 672
MvaI CCWGG 2 cut(s) 80, 872
MvnI CGCG 1 cut(s) 20
MwoI GCNNNNNNNGC 3 cut(s) 59, 410, 773
NaeI GCCGGC 1 cut(s) 55
NciI CCSGG 1 cut(s) 111
NdeI CATATG 1 cut(s) 825
NdeII GATC 2 cut(s) 390, 418
NgoMIV GCCGGC 1 cut(s) 53
NlaIII CATG 3 cut(s) 61, 823, 893
NlaIV GGNNCC 2 cut(s) 176, 738
NmeAIII GCCGAG 1 cut(s) 260
NmuCI GTSAC 2 cut(s) 474, 848
NsiI ATGCAT 1 cut(s) 825
NspI RCATGY 2 cut(s) 823, 893
PaeI GCATGC 1 cut(s) 823
PauI GCGCGC 1 cut(s) 18
PceI AGGCCT 1 cut(s) 42
PciI ACATGT 1 cut(s) 889
PciSI GCTCTTC 1 cut(s) 227
PdiI GCCGGC 1 cut(s) 55
PdmI GAANNNNTTC 1 cut(s) 602
PfeI GAWTC 1 cut(s) 914
Pfl23II CGTACG 2 cut(s) 9, 652
PfoI TCCNGGA 2 cut(s) 78, 870
PkrI GCNGC 4 cut(s) 532, 699, 775, 778
PleI GAGTC 1 cut(s) 961
PpsI GAGTC 1 cut(s) 961
Ppu21I YACGTR 1 cut(s) 13
PpuMI RGGWCCY 1 cut(s) 629
PscI ACATGT 1 cut(s) 889
Psp5II RGGWCCY 1 cut(s) 629
Psp6I CCWGG 2 cut(s) 78, 870
PspGI CCWGG 2 cut(s) 78, 870
PspLI CGTACG 2 cut(s) 9, 652
PspN4I GGNNCC 2 cut(s) 176, 738
PspPI GGNCC 4 cut(s) 239, 298, 629, 868
PspPPI RGGWCCY 1 cut(s) 629
PteI GCGCGC 1 cut(s) 18
PvuII CAGCTG 1 cut(s) 776
RsaI GTAC 5 cut(s) 11, 29, 639, 654, 670
RsaNI GTAC 5 cut(s) 10, 28, 638, 653, 669
RseI CAYNNNNRTG 2 cut(s) 818, 824
SapI GCTCTTC 1 cut(s) 227
SaqAI TTAA 3 cut(s) 642, 693, 947
SatI GCNGC 4 cut(s) 531, 698, 774, 777
Sau3AI GATC 2 cut(s) 390, 418
Sau96I GGNCC 4 cut(s) 239, 298, 629, 868
ScaI AGTACT 1 cut(s) 639
SchI GAGTC 1 cut(s) 962
ScrFI CCNGG 3 cut(s) 80, 111, 872
SduI GDGCHC 1 cut(s) 986
SfaNI GCATC 1 cut(s) 391
SinI GGWCC 4 cut(s) 239, 298, 629, 868
SmiMI CAYNNNNRTG 2 cut(s) 818, 824
SphI GCATGC 1 cut(s) 823
Sse9I AATT 4 cut(s) 643, 672, 806, 962
SseBI AGGCCT 1 cut(s) 42
SsiI CCGC 5 cut(s) 141, 145, 151, 301, 933
SspI AATATT 1 cut(s) 277
SspMI CTAG 2 cut(s) 44, 453
StuI AGGCCT 1 cut(s) 42
StyD4I CCNGG 3 cut(s) 78, 109, 870
StyI CCWWGG 1 cut(s) 662
TaaI ACNGT 3 cut(s) 499, 868, 926
TaiI ACGT 5 cut(s) 15, 99, 171, 333, 658
TaqI TCGA 1 cut(s) 349
TasI AATT 4 cut(s) 643, 672, 806, 962
TatI WGTACW 2 cut(s) 637, 668
TfiI GAWTC 1 cut(s) 914
Tru1I TTAA 3 cut(s) 642, 693, 947
Tru9I TTAA 3 cut(s) 642, 693, 947
TscAI CASTG 4 cut(s) 540, 622, 797, 820
TseFI GTSAC 2 cut(s) 474, 848
TseI GCWGC 4 cut(s) 530, 697, 773, 776
Tsp45I GTSAC 2 cut(s) 474, 848
TspDTI ATGAA 4 cut(s) 202, 333, 595, 927
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 4 cut(s) 540, 622, 797, 820
VpaK11BI GGWCC 4 cut(s) 239, 298, 629, 868
XapI RAATTY 2 cut(s) 806, 962
XbaI TCTAGA 1 cut(s) 452
XceI RCATGY 2 cut(s) 823, 893
XcmI CCANNNNNNNNNTGG 1 cut(s) 266
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 602
XspI CTAG 2 cut(s) 44, 453
ZraI GACGTC 1 cut(s) 169
ZrmI AGTACT 1 cut(s) 639
Zsp2I ATGCAT 1 cut(s) 825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.