Prupe.7G203600_v2.0.a1

Prolyl oligopeptidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0013157
Physical Location & Seq
Forward (+)
18880875 .. 18884172
3298 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G203600.1

Sequence Viewer

Length: 960 bp
ATGGTGACGTACGTGAGCGCGCTGCTGTACGGAGTTGGAGGCCTGGTTGTGGCGGGCATGGCATTGCTTGTGGCCCTCCAGGAGAAGCTCGTCTACGTGCCCGTCTTGCCGGGTCTCACCAAGTCCTACCCGATAACCCCGGCCCGGCTCCGGCTTACCTACGAGGACGTCTGGCTCCGATCCTCCGACGGCGTTCGGCTCCACGCTTGGTTCATCAAGCTCTTACCCGACTGCCGAGGTCCAACCCTTTTGTTTTTCCAAGAAAATGCTGGAAATATTGCGCATCGCCTTGAAATGGTCCGCATAATGATACAAAGGTTGCAATGCAACGTGTTTATGCTTTCATATCGAGGTTATGGAGCAAGCGAAGGATGTCCTTCTCAGCATGGGATTACAAAAGATGCTCAAGTTGCATTGGATCATCTTTATCAGAGGACTGACATTGACACATCTAGAATAGTAGTCTTTGGAAGGTCACTTGGTGGCGCAGTTGGAACTGTGGTTACTAAAAATAACCCTGATAAGGTTGCTGCACTGATAGTAGAAAACACTTTCACATCTATTTTGGACATGGCTGGAGTTTTATTGCCTTTCTTGAAGTGGTTTATCGGAGGCAGTAGTTCAAAAGGTCCTAAAGTACTTAATTTCCTTGTACGTTCTCCTTGGAGTACAATTGATGTCATTGGCGAGGTTAAGCAGCCAATCCTCTTTCTCTCTGGCTTGCAAGATGAGATGATTCCTCCGTCCCATATGCAAATGCTGTATGCCAAAGCAGCTGCTCATAATAGGCGATGTGTTTTTGCGGAATTTCCTACTGGCATGCACATGGATACTTGGCTCGCTGGTGGTGATCATTATTGGAGAACGATCCAGGAGTTTCTTCAACAACATGTTCAAGAGAAAAAAGATGATGAATCATCTAACAATGATATTGCTGCAGCAATTGAAAGCTCTCTGTGA

Protein Analysis

320

Amino Acids

35.42

Weight (kDa)

7.12

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20520
fragaria_vesca FvH4_1g08150 FvH4_1g08150
malus_domestica MD02G1086100.v1.1 MD15G1213300.v1.1
prunus_persica Prupe.7G203600_v2.0.a1 Prupe.7G203600_v2.0.a1
pyrus_communis pycom02g06930 pycom15g18970
rosa_chinensis RchiOBHm_Chr2g0094221
rosa_laevigata RLG00000016467
rosa_multiflora Rmu_sc0002193.1_g000008
rosa_roxburghii Rroxscaffold_2G00147360
rosa_rugosa Rorug02G0041900
rosa_samantha Rh2AG089700 Rh2BG089800 Rh2CG092300 Rh2DG088600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 171
Acc16I TGCGCA 1 cut(s) 282
AccI GTMKAC 1 cut(s) 93
AccII CGCG 1 cut(s) 20
AciI CCGC 3 cut(s) 53, 301, 803
AclWI GGATC 3 cut(s) 174, 426, 862
AcsI RAATTY 1 cut(s) 806
AcyI GRCGYC 1 cut(s) 168
AdeI CACNNNGTG 1 cut(s) 482
AfaI GTAC 5 cut(s) 11, 29, 639, 654, 670
AfiI CCNNNNNNNGG 5 cut(s) 49, 144, 150, 295, 523
AflIII ACRYGT 2 cut(s) 330, 889
AgsI TTSAA 6 cut(s) 293, 598, 624, 884, 896, 947
AjnI CCWGG 3 cut(s) 42, 78, 870
AluBI AGCT 4 cut(s) 88, 220, 776, 951
AluI AGCT 4 cut(s) 88, 220, 776, 951
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 3 cut(s) 174, 426, 862
AoxI GGCC 3 cut(s) 40, 72, 141
ApeKI GCWGC 7 cut(s) 22, 530, 697, 773, 776, 935, 938
ApoI RAATTY 1 cut(s) 806
AspLEI GCGC 4 cut(s) 20, 22, 283, 488
AspS9I GGNCC 5 cut(s) 73, 142, 239, 298, 629
AsuC2I CCSGG 3 cut(s) 111, 140, 145
AsuHPI GGTGA 3 cut(s) 16, 109, 860
AvaII GGWCC 3 cut(s) 239, 298, 629
BaeGI GKGCMC 1 cut(s) 102
BaeI ACNNNNGTAYC 2 cut(s) 302, 335
BarI GAAGNNNNNNTAC 2 cut(s) 77, 109
BbvI GCAGC 7 cut(s) 9, 517, 709, 763, 785, 922, 950
BceAI ACGGC 1 cut(s) 205
BciT130I CCWGG 3 cut(s) 44, 80, 872
BciVI GTATCC 1 cut(s) 823
BclI TGATCA 1 cut(s) 850
BcnI CCSGG 3 cut(s) 111, 140, 145
BcoDI GTCTC 1 cut(s) 119
BfaI CTAG 1 cut(s) 453
BfmI CTRYAG 1 cut(s) 936
BfuI GTATCC 1 cut(s) 823
BisI GCNGC 7 cut(s) 23, 531, 698, 774, 777, 936, 939
BlsI GCNGC 7 cut(s) 24, 532, 699, 775, 778, 937, 940
BmcAI AGTACT 1 cut(s) 639
Bme1390I CCNGG 6 cut(s) 44, 80, 111, 140, 145, 872
Bme18I GGWCC 3 cut(s) 239, 298, 629
BmgT120I GGNCC 5 cut(s) 73, 142, 239, 298, 629
BmiI GGNNCC 3 cut(s) 149, 176, 200
BmrFI CCNGG 6 cut(s) 44, 80, 111, 140, 145, 872
BmsI GCATC 2 cut(s) 292, 391
BpmI CTGGAG 2 cut(s) 62, 597
BpuEI CTTGAG 1 cut(s) 390
BpuMI CCSGG 3 cut(s) 111, 140, 145
BsaAI YACGTR 2 cut(s) 13, 97
BsaHI GRCGYC 1 cut(s) 168
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 3 cut(s) 138, 235, 662
BsaXI ACNNNNNCTCC 2 cut(s) 30, 60
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 144, 150, 295, 523
Bse1I ACTGG 1 cut(s) 820
Bse3DI GCAATG 2 cut(s) 62, 329
BseBI CCWGG 3 cut(s) 44, 80, 872
BseDI CCNNGG 3 cut(s) 138, 235, 662
BseGI GGATG 1 cut(s) 377
BseLI CCNNNNNNNGG 5 cut(s) 49, 144, 150, 295, 523
BseMI GCAATG 2 cut(s) 62, 329
BseMII CTCAG 1 cut(s) 395
BseNI ACTGG 1 cut(s) 820
BsePI GCGCGC 1 cut(s) 18
BseSI GKGCMC 1 cut(s) 102
BseXI GCAGC 7 cut(s) 9, 517, 709, 763, 785, 922, 950
BsgI GTGCAG 1 cut(s) 516
Bsh1236I CGCG 1 cut(s) 20
BshFI GGCC 3 cut(s) 42, 74, 143
BsiSI CCGG 4 cut(s) 110, 140, 145, 151
BsiWI CGTACG 1 cut(s) 9
BslFI GGGAC 1 cut(s) 730
BslI CCNNNNNNNGG 5 cut(s) 49, 144, 150, 295, 523
BsmAI GTCTC 1 cut(s) 119
BsmFI GGGAC 1 cut(s) 730
BsnI GGCC 3 cut(s) 42, 74, 143
Bso31I GGTCTC 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 102
Bsp143I GATC 4 cut(s) 179, 418, 850, 867
BspACI CCGC 3 cut(s) 53, 301, 803
BspANI GGCC 3 cut(s) 42, 74, 143
BspCNI CTCAG 1 cut(s) 394
BspFNI CGCG 1 cut(s) 20
BspLI GGNNCC 3 cut(s) 149, 176, 200
BspMAI CTGCAG 1 cut(s) 940
BspPI GGATC 3 cut(s) 174, 426, 862
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 2 cut(s) 62, 329
BsrI ACTGG 1 cut(s) 820
BssECI CCNNGG 3 cut(s) 138, 235, 662
BssHII GCGCGC 1 cut(s) 18
BssMI GATC 4 cut(s) 179, 418, 850, 867
BssNI GRCGYC 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 662
Bst2UI CCWGG 3 cut(s) 44, 80, 872
Bst4CI ACNGT 1 cut(s) 499
BstACI GRCGYC 1 cut(s) 168
BstBAI YACGTR 2 cut(s) 13, 97
BstC8I GCNNGC 6 cut(s) 20, 55, 364, 722, 821, 840
BstDEI CTNAG 1 cut(s) 381
BstF5I GGATG 1 cut(s) 377
BstFNI CGCG 1 cut(s) 20
BstHHI GCGC 4 cut(s) 20, 22, 283, 488
BstKTI GATC 4 cut(s) 182, 421, 853, 870
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 4 cut(s) 179, 418, 850, 867
BstMWI GCNNNNNNNGC 4 cut(s) 59, 106, 410, 773
BstNI CCWGG 3 cut(s) 44, 80, 872
BstNSI RCATGY 2 cut(s) 823, 893
BstSCI CCNGG 6 cut(s) 42, 78, 109, 138, 143, 870
BstSFI CTRYAG 1 cut(s) 936
BstSLI GKGCMC 1 cut(s) 102
BstUI CGCG 1 cut(s) 20
BstV1I GCAGC 7 cut(s) 9, 517, 709, 763, 785, 922, 950
BsuI GTATCC 1 cut(s) 823
BsuRI GGCC 3 cut(s) 42, 74, 143
BtgZI GCGATG 2 cut(s) 269, 805
BtsCI GGATG 1 cut(s) 377
BtsIMutI CAGTG 1 cut(s) 533
Cac8I GCNNGC 6 cut(s) 20, 55, 364, 722, 821, 840
CfoI GCGC 4 cut(s) 20, 22, 283, 488
Cfr13I GGNCC 5 cut(s) 73, 142, 239, 298, 629
Csp6I GTAC 5 cut(s) 10, 28, 638, 653, 669
CviAII CATG 6 cut(s) 58, 386, 571, 820, 826, 890
CviQI GTAC 5 cut(s) 10, 28, 638, 653, 669
DdeI CTNAG 1 cut(s) 381
DpnI GATC 4 cut(s) 181, 420, 852, 869
DpnII GATC 4 cut(s) 179, 418, 850, 867
DraIII CACNNNGTG 1 cut(s) 482
Eco130I CCWWGG 1 cut(s) 662
Eco147I AGGCCT 1 cut(s) 42
Eco31I GGTCTC 1 cut(s) 119
Eco47I GGWCC 3 cut(s) 239, 298, 629
EcoO109I RGGNCCY 1 cut(s) 629
EcoRII CCWGG 3 cut(s) 42, 78, 870
EcoT14I CCWWGG 1 cut(s) 662
ErhI CCWWGG 1 cut(s) 662
FaeI CATG 6 cut(s) 61, 389, 574, 823, 829, 893
FaqI GGGAC 1 cut(s) 730
FatI CATG 6 cut(s) 57, 385, 570, 819, 825, 889
FauI CCCGC 1 cut(s) 46
FauNDI CATATG 1 cut(s) 750
FbaI TGATCA 1 cut(s) 850
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 7 cut(s) 23, 531, 698, 774, 777, 936, 939
FokI GGATG 1 cut(s) 384
Fsp4HI GCNGC 7 cut(s) 23, 531, 698, 774, 777, 936, 939
FspBI CTAG 1 cut(s) 453
FspI TGCGCA 1 cut(s) 282
GlaI GCGC 4 cut(s) 19, 21, 282, 487
GluI GCNGC 7 cut(s) 23, 531, 698, 774, 777, 936, 939
GsuI CTGGAG 2 cut(s) 62, 597
HaeIII GGCC 3 cut(s) 42, 74, 143
HapII CCGG 4 cut(s) 110, 140, 145, 151
HhaI GCGC 4 cut(s) 20, 22, 283, 488
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 6 cut(s) 61, 389, 574, 823, 829, 893
Hin6I GCGC 4 cut(s) 18, 20, 281, 486
HinP1I GCGC 4 cut(s) 18, 20, 281, 486
HinfI GANTC 2 cut(s) 736, 914
HpaII CCGG 4 cut(s) 110, 140, 145, 151
HphI GGTGA 3 cut(s) 16, 109, 860
Hpy166II GTNNAC 1 cut(s) 94
Hpy188I TCNGA 4 cut(s) 179, 187, 432, 611
Hpy188III TCNNGA 3 cut(s) 453, 595, 896
Hpy8I GTNNAC 1 cut(s) 94
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 3 cut(s) 362, 387, 465
HpyCH4III ACNGT 1 cut(s) 499
HpyCH4IV ACGT 6 cut(s) 8, 12, 96, 168, 330, 655
HpyCH4V TGCA 8 cut(s) 322, 327, 413, 533, 724, 754, 823, 938
HpyF10VI GCNNNNNNNGC 4 cut(s) 59, 106, 410, 773
HpyF3I CTNAG 1 cut(s) 381
HpySE526I ACGT 6 cut(s) 8, 12, 96, 168, 330, 655
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 6 cut(s) 61, 389, 574, 823, 829, 893
HspAI GCGC 4 cut(s) 18, 20, 281, 486
Ksp22I TGATCA 1 cut(s) 850
Kzo9I GATC 4 cut(s) 179, 418, 850, 867
LmnI GCTCC 4 cut(s) 153, 180, 204, 359
Lsp1109I GCAGC 7 cut(s) 9, 517, 709, 763, 785, 922, 950
LweI GCATC 2 cut(s) 292, 391
MaeI CTAG 1 cut(s) 453
MaeII ACGT 6 cut(s) 8, 12, 96, 168, 330, 655
MaeIII GTNAC 3 cut(s) 4, 474, 502
MalI GATC 4 cut(s) 181, 420, 852, 869
MboI GATC 4 cut(s) 179, 418, 850, 867
MboII GAAGA 1 cut(s) 872
MfeI CAATTG 2 cut(s) 672, 942
MhlI GDGCHC 1 cut(s) 102
MluCI AATT 4 cut(s) 643, 672, 806, 942
MmeI TCCRAC 4 cut(s) 16, 210, 266, 472
MseI TTAA 2 cut(s) 642, 693
MslI CAYNNNNRTG 1 cut(s) 824
MspA1I CMGCKG 1 cut(s) 776
MspI CCGG 4 cut(s) 110, 140, 145, 151
MspR9I CCNGG 6 cut(s) 44, 80, 111, 140, 145, 872
MunI CAATTG 2 cut(s) 672, 942
MvaI CCWGG 3 cut(s) 44, 80, 872
MvnI CGCG 1 cut(s) 20
MwoI GCNNNNNNNGC 4 cut(s) 59, 106, 410, 773
NciI CCSGG 3 cut(s) 111, 140, 145
NdeI CATATG 1 cut(s) 750
NdeII GATC 4 cut(s) 179, 418, 850, 867
NlaIII CATG 6 cut(s) 61, 389, 574, 823, 829, 893
NlaIV GGNNCC 3 cut(s) 149, 176, 200
NmeAIII GCCGAG 1 cut(s) 260
NmuCI GTSAC 2 cut(s) 4, 474
NsbI TGCGCA 1 cut(s) 282
NspI RCATGY 2 cut(s) 823, 893
PaeI GCATGC 1 cut(s) 823
PauI GCGCGC 1 cut(s) 18
PceI AGGCCT 1 cut(s) 42
PciI ACATGT 1 cut(s) 889
PfeI GAWTC 2 cut(s) 736, 914
Pfl23II CGTACG 1 cut(s) 9
PfoI TCCNGGA 2 cut(s) 78, 870
PkrI GCNGC 7 cut(s) 24, 532, 699, 775, 778, 937, 940
Ppu21I YACGTR 2 cut(s) 13, 97
PpuMI RGGWCCY 1 cut(s) 629
PscI ACATGT 1 cut(s) 889
Psp5II RGGWCCY 1 cut(s) 629
Psp6I CCWGG 3 cut(s) 42, 78, 870
PspGI CCWGG 3 cut(s) 42, 78, 870
PspLI CGTACG 1 cut(s) 9
PspN4I GGNNCC 3 cut(s) 149, 176, 200
PspPI GGNCC 5 cut(s) 73, 142, 239, 298, 629
PspPPI RGGWCCY 1 cut(s) 629
PsrI GAACNNNNNNTAC 2 cut(s) 487, 519
PstI CTGCAG 1 cut(s) 940
PteI GCGCGC 1 cut(s) 18
PvuII CAGCTG 1 cut(s) 776
RsaI GTAC 5 cut(s) 11, 29, 639, 654, 670
RsaNI GTAC 5 cut(s) 10, 28, 638, 653, 669
RseI CAYNNNNRTG 1 cut(s) 824
SaqAI TTAA 2 cut(s) 642, 693
SatI GCNGC 7 cut(s) 23, 531, 698, 774, 777, 936, 939
Sau3AI GATC 4 cut(s) 179, 418, 850, 867
Sau96I GGNCC 5 cut(s) 73, 142, 239, 298, 629
ScaI AGTACT 1 cut(s) 639
ScrFI CCNGG 6 cut(s) 44, 80, 111, 140, 145, 872
SduI GDGCHC 1 cut(s) 102
SfaNI GCATC 2 cut(s) 292, 391
SfcI CTRYAG 1 cut(s) 936
SinI GGWCC 3 cut(s) 239, 298, 629
SmiMI CAYNNNNRTG 1 cut(s) 824
SmlI CTYRAG 1 cut(s) 405
SmoI CTYRAG 1 cut(s) 405
SphI GCATGC 1 cut(s) 823
Sse9I AATT 4 cut(s) 643, 672, 806, 942
SseBI AGGCCT 1 cut(s) 42
SsiI CCGC 3 cut(s) 53, 301, 803
SspI AATATT 1 cut(s) 277
SspMI CTAG 1 cut(s) 453
StuI AGGCCT 1 cut(s) 42
StyD4I CCNGG 6 cut(s) 42, 78, 109, 138, 143, 870
StyI CCWWGG 1 cut(s) 662
TaaI ACNGT 1 cut(s) 499
TaiI ACGT 6 cut(s) 11, 15, 99, 171, 333, 658
TaqI TCGA 1 cut(s) 349
TasI AATT 4 cut(s) 643, 672, 806, 942
TatI WGTACW 2 cut(s) 637, 668
TfiI GAWTC 2 cut(s) 736, 914
Tru1I TTAA 2 cut(s) 642, 693
Tru9I TTAA 2 cut(s) 642, 693
TscAI CASTG 1 cut(s) 540
TseFI GTSAC 2 cut(s) 4, 474
TseI GCWGC 7 cut(s) 22, 530, 697, 773, 776, 935, 938
Tsp45I GTSAC 2 cut(s) 4, 474
TspDTI ATGAA 3 cut(s) 202, 333, 927
TspGWI ACGGA 2 cut(s) 45, 732
TspRI CASTG 1 cut(s) 540
VpaK11BI GGWCC 3 cut(s) 239, 298, 629
XapI RAATTY 1 cut(s) 806
XbaI TCTAGA 1 cut(s) 452
XceI RCATGY 2 cut(s) 823, 893
XcmI CCANNNNNNNNNTGG 1 cut(s) 266
XmiI GTMKAC 1 cut(s) 93
XspI CTAG 1 cut(s) 453
ZraI GACGTC 1 cut(s) 169
ZrmI AGTACT 1 cut(s) 639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.