Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0009744

Physical Location & Seq

Genomic Coordinates Reverse (-)

5144067 .. 5147353

Gene Structure 3287 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g09610.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGCTTCCGATCATCTAATGTGGACGCCAAGGTTTCTACTGGTGCTGGTTTTCTTATCGTTCCCATATTATGCTCAGTGTGGAAGTATCAGCAACACGATACAGTCCGAGTGTTTGAAAGTTCCCAACTCGGAGTTTGGCGGGTCGATCATCAACACCATTAATGTTTTGCAGCAGGTGGTGTCTATTCTCTCCGACGTTGCTAAGGGTTTTGGGGATTTCCGGCTTTCGAATGCCGTCGACGACTGTCTGGAGTTGATGGATGACTCGACTGATCAGTTGAGCTGGACTCTCTCTGCTACCCAGAATAAGAATGGTAAACATAACAGCACTGGGAATTTAAGTTCTGATCTGAGAACATGGCTGAGTGCTACACTGGTTAATCAAGACACATGCAATGAAGGACTTGATGGCACCAACAGCATTGTCAAAAGTTTGGTGTCCGGTAGCCTGAATCAAATAACATCCTTGGTTCTAGAACTACTCGGCCAAGTGCACCCAACTTCTGATCAGCACGAGTCATCAAATGGCCAAACTCCGGCGTGGTTTAAAGCCGAGGACCGCAAACTTCTACAAGCAAATGGAGTGCCTGTGGACGTTGTGGTAGCTCAGGATGGAACCGGGAACTTCACAAACATCACCGCCGCGATTCTTTCGGCACCGGATTACAGCTTGAAGCGCTATGTGATTTACGTCAAGAAAGGGCTGTATAAGGAGTATGTGGAAATCAAGAAGAAGAAATGGAACATAATGATGATCGGAGATGGCATGGATGCTACTGTGATCAGTGGGAATCACAATTTTGTGGATGGTTGGACCACATTTCGCTCTGCAACTTTTGCTGTTAGTGGCAGAGGATTCATAGCGCGCGATATCACATTCGAGAACACAGCAGGACCGGAGAAGCACATGGCGGTGGCGCTACGATCGGACTCGGACCTCTCGGCGTTTTACCGGTGTGAGTTTCGGGGATATCAGGACACATTATACACGCACTCTATGCGCCAGTTCTACCGAGACTGCAAAATCAGCGGCACTGTTGATTTCATCTTCGGTGACGGCACTGTTATATTCCAAAACTGCCAAATCCTAGCCAGAAAAGCCTTGCCAAACCAAAAGAACAGCATCACAGCCCATGGCCGGAAGTACAAAGATGAGCCGACCGGCTTTTCGTTCCAATTCTGCAACATTTCTGCACATCCGGACTTGTTAGCCACCCCAGTTAACTCTAGCACACCTACATACCTTGGTAGACCATGGAAGGAATATTCCAGAACTATAATCATGCAGTCCTTCATGAGCAATATCATAAAGCCTGCAGGGTGGCTAGAGTGGAACGGTGACATGTTTTTGAAAACATTGTTCTATGGAGAGTACATGAATTATGGCCCTGGAGCGGGACTGGGAAGCCGGGTTACCTGGCCGGGATATCAAAAGTTTAACCAGTCCGGTCAGGCCAAGAACTATACAGTGGCCGAGTTTATTGAAGGAAACCTGTGGTTGCCCTCTACTGGTGTCAAATATACTTCAGGCTTTGGGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004857 GO:0005575 GO:0005618 GO:0005623 GO:0006950 GO:0006952 GO:0008150 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0016787 GO:0016788 GO:0030234 GO:0030312 GO:0030599 GO:0042742 GO:0043086 GO:0043207 GO:0044092 GO:0044464 GO:0046910 GO:0050790 GO:0050829 GO:0050896 GO:0051704 GO:0051707 GO:0052689 GO:0065007 GO:0065009 GO:0071944 GO:0098542 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

515

Amino Acids

57.09

Weight (kDa)

6.51

Isoelectric Point (pI)

27.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	59 - 159	1.8e-16	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	199 - 498	1e-143	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009744)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G43270 AT4G33220 AT4G33220
fragaria_vesca	FvH4_1g09610
malus_domestica	MD02G1104600.v1.1 MD02G1105100.v1.1 MD15G1224900.v1.1
prunus_persica	Prupe.7G190300_v2.0.a1
pyrus_communis	pycom02g08260
rosa_chinensis	RchiOBHm_Chr2g0096461
rosa_laevigata	RLG00000016641
rosa_multiflora	Rmu_co8263641.1_g000001 Rmu_sc0004096.1_g000019 Rmu_sc0029740.1_g000002
rosa_roxburghii	Rroxscaffold_2G00145620
rosa_rugosa	Rorug02G0057900
rosa_samantha	Rh2AG104800 Rh2BG107000 Rh2CG108800 Rh2DG108000
rosa_wichuraiana	Rw2G008100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	166
Acc36I	ACCTGC	1 cut(s)	166
AccB1I	GGYRCC	2 cut(s)	413, 658
AccBSI	CCGCTC	1 cut(s)	1397
AccI	GTMKAC	2 cut(s)	240, 1252
AccII	CGCG	3 cut(s)	647, 868, 870
AccIII	TCCGGA	1 cut(s)	1201
AciI	CCGC	7 cut(s)	141, 562, 642, 645, 914, 1032, 1397
AcoI	YGGCCR	5 cut(s)	487, 529, 1138, 1421, 1473
AcsI	RAATTY	1 cut(s)	337
AcuI	CTGAAG	1 cut(s)	1512
AcyI	GRCGYC	1 cut(s)	26
AfaI	GTAC	2 cut(s)	1148, 1376
AfeI	AGCGCT	1 cut(s)	680
AfiI	CCNNNNNNNGG	5 cut(s)	538, 1140, 1396, 1397, 1511
AflIII	ACRYGT	1 cut(s)	1344
AgeI	ACCGGT	1 cut(s)	954
AgsI	TTSAA	4 cut(s)	118, 676, 1354, 1487
AjnI	CCWGG	2 cut(s)	1390, 1418
AloI	GAACNNNNNNTCC	2 cut(s)	328, 360
AluBI	AGCT	3 cut(s)	285, 608, 672
AluI	AGCT	3 cut(s)	285, 608, 672
Alw21I	GWGCWC	1 cut(s)	498
Alw26I	GTCTC	1 cut(s)	1011
Alw44I	GTGCAC	1 cut(s)	494
Aor13HI	TCCGGA	1 cut(s)	1201
Aor51HI	AGCGCT	1 cut(s)	680
AoxI	GGCC	7 cut(s)	487, 529, 1138, 1387, 1421, 1455, 1473
ApaLI	GTGCAC	1 cut(s)	494
ApeKI	GCWGC	1 cut(s)	172
ApoI	RAATTY	1 cut(s)	337
ArsI	GACNNNNNNTTYG	2 cut(s)	1153, 1185
AseI	ATTAAT	1 cut(s)	162
AsiGI	ACCGGT	1 cut(s)	954
AspLEI	GCGC	5 cut(s)	681, 868, 870, 922, 1005
AspS9I	GGNCC	5 cut(s)	559, 816, 896, 937, 1388
AsuC2I	CCSGG	3 cut(s)	622, 1412, 1425
AsuHPI	GGTGA	3 cut(s)	631, 1067, 1352
AsuII	TTCGAA	1 cut(s)	230
AvaII	GGWCC	4 cut(s)	559, 816, 896, 937
BaeGI	GKGCMC	1 cut(s)	498
BalI	TGGCCA	1 cut(s)	531
BanI	GGYRCC	2 cut(s)	413, 658
BarI	GAAGNNNNNNTAC	2 cut(s)	1399, 1431
BauI	CACGAG	1 cut(s)	515
Bbv12I	GWGCWC	1 cut(s)	498
BbvI	GCAGC	1 cut(s)	184
BccI	CCATC	5 cut(s)	253, 404, 608, 758, 803
BceAI	ACGGC	2 cut(s)	221, 1075
BciT130I	CCWGG	2 cut(s)	1392, 1420
BclI	TGATCA	3 cut(s)	274, 508, 783
BcnI	CCSGG	3 cut(s)	622, 1412, 1425
BcoDI	GTCTC	1 cut(s)	1011
BfaI	CTAG	4 cut(s)	476, 1091, 1230, 1328
BfmI	CTRYAG	1 cut(s)	1317
BfoI	RGCGCY	2 cut(s)	682, 923
BfuAI	ACCTGC	1 cut(s)	166
BisI	GCNGC	3 cut(s)	173, 645, 1033
BlsI	GCNGC	3 cut(s)	174, 646, 1034
Bme1390I	CCNGG	5 cut(s)	622, 1392, 1412, 1420, 1425
Bme18I	GGWCC	4 cut(s)	559, 816, 896, 937
BmgT120I	GGNCC	5 cut(s)	559, 816, 896, 937, 1388
BmiI	GGNNCC	3 cut(s)	415, 619, 660
BmrFI	CCNGG	5 cut(s)	622, 1392, 1412, 1420, 1425
BmrI	ACTGGG	3 cut(s)	342, 1214, 1412
BmsI	GCATC	2 cut(s)	763, 1134
BmuI	ACTGGG	3 cut(s)	342, 1214, 1412
BoxI	GACNNNNGTC	1 cut(s)	246
BplI	GAGNNNNNCTC	2 cut(s)	274, 306
BpmI	CTGGAG	2 cut(s)	272, 1413
Bpu10I	CCTNAGC	2 cut(s)	204, 609
Bpu14I	TTCGAA	1 cut(s)	230
BpuMI	CCSGG	3 cut(s)	622, 1412, 1425
BsaHI	GRCGYC	1 cut(s)	26
BsaJI	CCNNGG	7 cut(s)	29, 468, 555, 1135, 1246, 1256, 1390
BsaWI	WCCGGW	6 cut(s)	443, 661, 898, 954, 1201, 1448
BsaXI	ACNNNNNCTCC	2 cut(s)	576, 606
Bsc4I	CCNNNNNNNGG	5 cut(s)	538, 1140, 1396, 1397, 1511
Bse118I	RCCGGY	2 cut(s)	954, 1163
Bse1I	ACTGG	8 cut(s)	45, 337, 381, 1006, 1220, 1407, 1444, 1516
Bse3DI	GCAATG	1 cut(s)	403
BseAI	TCCGGA	1 cut(s)	1201
BseBI	CCWGG	2 cut(s)	1392, 1420
BseDI	CCNNGG	7 cut(s)	29, 468, 555, 1135, 1246, 1256, 1390
BseGI	GGATG	6 cut(s)	268, 464, 619, 778, 814, 1198
BseLI	CCNNNNNNNGG	5 cut(s)	538, 1140, 1396, 1397, 1511
BseMI	GCAATG	1 cut(s)	403
BseMII	CTCAG	4 cut(s)	89, 344, 356, 623
BseNI	ACTGG	8 cut(s)	45, 337, 381, 1006, 1220, 1407, 1444, 1516
BsePI	GCGCGC	1 cut(s)	866
BseSI	GKGCMC	1 cut(s)	498
BseXI	GCAGC	1 cut(s)	184
BsgI	GTGCAG	1 cut(s)	1179
Bsh1236I	CGCG	3 cut(s)	647, 868, 870
Bsh1285I	CGRYCG	2 cut(s)	929, 1164
BshFI	GGCC	7 cut(s)	489, 531, 1140, 1389, 1423, 1457, 1475
BshNI	GGYRCC	2 cut(s)	413, 658
BshTI	ACCGGT	1 cut(s)	954
BsiEI	CGRYCG	2 cut(s)	929, 1164
BsiHKAI	GWGCWC	1 cut(s)	498
BslFI	GGGAC	1 cut(s)	1413
BslI	CCNNNNNNNGG	5 cut(s)	538, 1140, 1396, 1397, 1511
BsmAI	GTCTC	1 cut(s)	1011
BsmFI	GGGAC	1 cut(s)	1413
BsmI	GAATGC	1 cut(s)	238
BsnI	GGCC	7 cut(s)	489, 531, 1140, 1389, 1423, 1457, 1475
Bsp119I	TTCGAA	1 cut(s)	230
Bsp1286I	GDGCHC	1 cut(s)	498
Bsp13I	TCCGGA	1 cut(s)	1201
Bsp143I	GATC	8 cut(s)	10, 147, 274, 349, 508, 756, 783, 926
Bsp19I	CCATGG	2 cut(s)	1135, 1256
BspACI	CCGC	7 cut(s)	141, 562, 642, 645, 914, 1032, 1397
BspANI	GGCC	7 cut(s)	489, 531, 1140, 1389, 1423, 1457, 1475
BspCNI	CTCAG	4 cut(s)	88, 345, 357, 622
BspEI	TCCGGA	1 cut(s)	1201
BspFNI	CGCG	3 cut(s)	647, 868, 870
BspHI	TCATGA	1 cut(s)	1296
BspLI	GGNNCC	3 cut(s)	415, 619, 660
BspMAI	CTGCAG	1 cut(s)	1321
BspMI	ACCTGC	1 cut(s)	166
BspT104I	TTCGAA	1 cut(s)	230
BspT107I	GGYRCC	2 cut(s)	413, 658
BsrBI	CCGCTC	1 cut(s)	1397
BsrDI	GCAATG	1 cut(s)	403
BsrFI	RCCGGY	2 cut(s)	954, 1163
BsrI	ACTGG	8 cut(s)	45, 337, 381, 1006, 1220, 1407, 1444, 1516
BssAI	RCCGGY	2 cut(s)	954, 1163
BssECI	CCNNGG	7 cut(s)	29, 468, 555, 1135, 1246, 1256, 1390
BssHII	GCGCGC	1 cut(s)	866
BssMI	GATC	8 cut(s)	10, 147, 274, 349, 508, 756, 783, 926
BssNI	GRCGYC	1 cut(s)	26
BssSI	CACGAG	1 cut(s)	515
BssT1I	CCWWGG	5 cut(s)	29, 468, 1135, 1246, 1256
Bst2BI	CACGAG	1 cut(s)	515
Bst2UI	CCWGG	2 cut(s)	1392, 1420
Bst4CI	ACNGT	7 cut(s)	105, 248, 781, 1039, 1066, 1340, 1471
BstACI	GRCGYC	1 cut(s)	26
BstAPI	GCANNNNNTGC	2 cut(s)	839, 1000
BstBI	TTCGAA	1 cut(s)	230
BstC8I	GCNNGC	2 cut(s)	868, 1317
BstDEI	CTNAG	5 cut(s)	75, 204, 353, 365, 609
BstDSI	CCRYGG	2 cut(s)	1135, 1256
BstEII	GGTNACC	1 cut(s)	1414
BstF5I	GGATG	6 cut(s)	268, 464, 619, 778, 814, 1198
BstFNI	CGCG	3 cut(s)	647, 868, 870
BstH2I	RGCGCY	2 cut(s)	682, 923
BstHHI	GCGC	5 cut(s)	681, 868, 870, 922, 1005
BstKTI	GATC	8 cut(s)	13, 150, 277, 352, 511, 759, 786, 929
BstMAI	GTCTC	1 cut(s)	1011
BstMBI	GATC	8 cut(s)	10, 147, 274, 349, 508, 756, 783, 926
BstMCI	CGRYCG	2 cut(s)	929, 1164
BstMWI	GCNNNNNNNGC	6 cut(s)	420, 678, 839, 1000, 1029, 1100
BstNI	CCWGG	2 cut(s)	1392, 1420
BstNSI	RCATGY	2 cut(s)	396, 1348
BstPAI	GACNNNNGTC	1 cut(s)	246
BstPI	GGTNACC	1 cut(s)	1414
BstSCI	CCNGG	5 cut(s)	620, 1390, 1410, 1418, 1423
BstSFI	CTRYAG	1 cut(s)	1317
BstSLI	GKGCMC	1 cut(s)	498
BstUI	CGCG	3 cut(s)	647, 868, 870
BstV1I	GCAGC	1 cut(s)	184
BsuRI	GGCC	7 cut(s)	489, 531, 1140, 1389, 1423, 1457, 1475
BtgI	CCRYGG	2 cut(s)	1135, 1256
BtsCI	GGATG	6 cut(s)	268, 464, 619, 778, 814, 1198
BtsIMutI	CAGTG	7 cut(s)	83, 330, 374, 793, 1035, 1062, 1476
BveI	ACCTGC	1 cut(s)	166
Cac8I	GCNNGC	2 cut(s)	868, 1317
CciI	TCATGA	1 cut(s)	1296
CfoI	GCGC	5 cut(s)	681, 868, 870, 922, 1005
Cfr10I	RCCGGY	2 cut(s)	954, 1163
Cfr13I	GGNCC	5 cut(s)	559, 816, 896, 937, 1388
CseI	GACGC	1 cut(s)	34
Csp6I	GTAC	2 cut(s)	1147, 1375
CspAI	ACCGGT	1 cut(s)	954
CviQI	GTAC	2 cut(s)	1147, 1375
DdeI	CTNAG	5 cut(s)	75, 204, 353, 365, 609
DpnI	GATC	8 cut(s)	12, 149, 276, 351, 510, 758, 785, 928
DpnII	GATC	8 cut(s)	10, 147, 274, 349, 508, 756, 783, 926
DraI	TTTAAA	1 cut(s)	550
EaeI	YGGCCR	5 cut(s)	487, 529, 1138, 1421, 1473
Eco130I	CCWWGG	5 cut(s)	29, 468, 1135, 1246, 1256
Eco32I	GATATC	3 cut(s)	874, 974, 1430
Eco47I	GGWCC	4 cut(s)	559, 816, 896, 937
Eco47III	AGCGCT	1 cut(s)	680
Eco57I	CTGAAG	1 cut(s)	1512
Eco91I	GGTNACC	1 cut(s)	1414
EcoO65I	GGTNACC	1 cut(s)	1414
EcoRII	CCWGG	2 cut(s)	1390, 1418
EcoRV	GATATC	3 cut(s)	874, 974, 1430
EcoT14I	CCWWGG	5 cut(s)	29, 468, 1135, 1246, 1256
ErhI	CCWWGG	5 cut(s)	29, 468, 1135, 1246, 1256
FaqI	GGGAC	1 cut(s)	1413
FauI	CCCGC	2 cut(s)	134, 1390
FbaI	TGATCA	3 cut(s)	274, 508, 783
FblI	GTMKAC	2 cut(s)	240, 1252
Fnu4HI	GCNGC	3 cut(s)	173, 645, 1033
FokI	GGATG	6 cut(s)	275, 451, 626, 785, 821, 1185
Fsp4HI	GCNGC	3 cut(s)	173, 645, 1033
FspBI	CTAG	4 cut(s)	476, 1091, 1230, 1328
GlaI	GCGC	5 cut(s)	680, 867, 869, 921, 1004
GluI	GCNGC	3 cut(s)	173, 645, 1033
GsuI	CTGGAG	2 cut(s)	272, 1413
HaeII	RGCGCY	2 cut(s)	682, 923
HaeIII	GGCC	7 cut(s)	489, 531, 1140, 1389, 1423, 1457, 1475
HgaI	GACGC	1 cut(s)	34
HhaI	GCGC	5 cut(s)	681, 868, 870, 922, 1005
Hin1I	GRCGYC	1 cut(s)	26
Hin6I	GCGC	5 cut(s)	679, 866, 868, 920, 1003
HinP1I	GCGC	5 cut(s)	679, 866, 868, 920, 1003
HincII	GTYRAC	2 cut(s)	241, 1225
HindII	GTYRAC	2 cut(s)	241, 1225
HinfI	GANTC	8 cut(s)	266, 289, 454, 518, 649, 793, 858, 932
HpaI	GTTAAC	1 cut(s)	1225
HphI	GGTGA	3 cut(s)	631, 1067, 1352
Hpy166II	GTNNAC	7 cut(s)	24, 241, 320, 496, 595, 1225, 1253
Hpy8I	GTNNAC	7 cut(s)	24, 241, 320, 496, 595, 1225, 1253
Hpy99I	CGWCG	3 cut(s)	200, 242, 245
HpyAV	CCTTC	4 cut(s)	395, 1255, 1303, 1481
HpyCH4III	ACNGT	7 cut(s)	105, 248, 781, 1039, 1066, 1340, 1471
HpyCH4IV	ACGT	3 cut(s)	198, 597, 693
HpyCH4V	TGCA	9 cut(s)	172, 396, 496, 833, 1023, 1185, 1196, 1288, 1319
HpyF10VI	GCNNNNNNNGC	6 cut(s)	420, 678, 839, 1000, 1029, 1100
HpyF3I	CTNAG	5 cut(s)	75, 204, 353, 365, 609
HpySE526I	ACGT	3 cut(s)	198, 597, 693
Hsp92I	GRCGYC	1 cut(s)	26
HspAI	GCGC	5 cut(s)	679, 866, 868, 920, 1003
Kpn2I	TCCGGA	1 cut(s)	1201
Ksp22I	TGATCA	3 cut(s)	274, 508, 783
KspAI	GTTAAC	1 cut(s)	1225
Kzo9I	GATC	8 cut(s)	10, 147, 274, 349, 508, 756, 783, 926
LmnI	GCTCC	1 cut(s)	1394
Lsp1109I	GCAGC	1 cut(s)	184
LweI	GCATC	2 cut(s)	763, 1134
MaeI	CTAG	4 cut(s)	476, 1091, 1230, 1328
MaeII	ACGT	3 cut(s)	198, 597, 693
MaeIII	GTNAC	3 cut(s)	1055, 1340, 1414
MalI	GATC	8 cut(s)	12, 149, 276, 351, 510, 758, 785, 928
MbiI	CCGCTC	1 cut(s)	1397
MboI	GATC	8 cut(s)	10, 147, 274, 349, 508, 756, 783, 926
MboII	GAAGA	3 cut(s)	745, 748, 1042
MhlI	GDGCHC	1 cut(s)	498
MlsI	TGGCCA	1 cut(s)	531
MluCI	AATT	4 cut(s)	337, 799, 1178, 1381
MluNI	TGGCCA	1 cut(s)	531
MlyI	GAGTC	4 cut(s)	260, 283, 527, 926
MmeI	TCCRAC	2 cut(s)	219, 794
MnlI	CCTC	4 cut(s)	550, 848, 950, 1516
Mox20I	TGGCCA	1 cut(s)	531
MroI	TCCGGA	1 cut(s)	1201
MscI	TGGCCA	1 cut(s)	531
MseI	TTAA	7 cut(s)	162, 341, 381, 549, 1224, 1440, 1543
MslI	CAYNNNNRTG	2 cut(s)	752, 914
Msp20I	TGGCCA	1 cut(s)	531
MspA1I	CMGCKG	1 cut(s)	1032
MspR9I	CCNGG	5 cut(s)	622, 1392, 1412, 1420, 1425
Mva1269I	GAATGC	1 cut(s)	238
MvaI	CCWGG	2 cut(s)	1392, 1420
MvnI	CGCG	3 cut(s)	647, 868, 870
MwoI	GCNNNNNNNGC	6 cut(s)	420, 678, 839, 1000, 1029, 1100
NciI	CCSGG	3 cut(s)	622, 1412, 1425
NcoI	CCATGG	2 cut(s)	1135, 1256
NdeII	GATC	8 cut(s)	10, 147, 274, 349, 508, 756, 783, 926
NlaIV	GGNNCC	3 cut(s)	415, 619, 660
NmeAIII	GCCGAG	4 cut(s)	465, 580, 923, 1501
NmuCI	GTSAC	2 cut(s)	1055, 1340
NspI	RCATGY	2 cut(s)	396, 1348
NspV	TTCGAA	1 cut(s)	230
PagI	TCATGA	1 cut(s)	1296
PaqCI	CACCTGC	1 cut(s)	166
PauI	GCGCGC	1 cut(s)	866
PciI	ACATGT	1 cut(s)	1344
PctI	GAATGC	1 cut(s)	238
PfeI	GAWTC	4 cut(s)	454, 649, 793, 858
PinAI	ACCGGT	1 cut(s)	954
PkrI	GCNGC	3 cut(s)	174, 646, 1034
Ple19I	CGATCG	1 cut(s)	929
PleI	GAGTC	4 cut(s)	260, 283, 526, 926
PpsI	GAGTC	4 cut(s)	260, 283, 526, 926
PscI	ACATGT	1 cut(s)	1344
PshAI	GACNNNNGTC	1 cut(s)	246
PshBI	ATTAAT	1 cut(s)	162
Psp6I	CCWGG	2 cut(s)	1390, 1418
PspEI	GGTNACC	1 cut(s)	1414
PspGI	CCWGG	2 cut(s)	1390, 1418
PspN4I	GGNNCC	3 cut(s)	415, 619, 660
PspPI	GGNCC	5 cut(s)	559, 816, 896, 937, 1388
PstI	CTGCAG	1 cut(s)	1321
PteI	GCGCGC	1 cut(s)	866
PvuI	CGATCG	1 cut(s)	929
RsaI	GTAC	2 cut(s)	1148, 1376
RsaNI	GTAC	2 cut(s)	1147, 1375
RseI	CAYNNNNRTG	2 cut(s)	752, 914
SalI	GTCGAC	1 cut(s)	239
SaqAI	TTAA	7 cut(s)	162, 341, 381, 549, 1224, 1440, 1543
SatI	GCNGC	3 cut(s)	173, 645, 1033
Sau3AI	GATC	8 cut(s)	10, 147, 274, 349, 508, 756, 783, 926
Sau96I	GGNCC	5 cut(s)	559, 816, 896, 937, 1388
SbfI	CCTGCAGG	1 cut(s)	1321
SchI	GAGTC	4 cut(s)	260, 283, 527, 926
ScrFI	CCNGG	5 cut(s)	622, 1392, 1412, 1420, 1425
SdaI	CCTGCAGG	1 cut(s)	1321
SduI	GDGCHC	1 cut(s)	498
SfaNI	GCATC	2 cut(s)	763, 1134
SfcI	CTRYAG	1 cut(s)	1317
SfuI	TTCGAA	1 cut(s)	230
SgrDI	CGTCGACG	1 cut(s)	239
SinI	GGWCC	4 cut(s)	559, 816, 896, 937
SmiMI	CAYNNNNRTG	2 cut(s)	752, 914
Sse8387I	CCTGCAGG	1 cut(s)	1321
Sse9I	AATT	4 cut(s)	337, 799, 1178, 1381
SsiI	CCGC	7 cut(s)	141, 562, 642, 645, 914, 1032, 1397
SspI	AATATT	1 cut(s)	1268
SspMI	CTAG	4 cut(s)	476, 1091, 1230, 1328
StyD4I	CCNGG	5 cut(s)	620, 1390, 1410, 1418, 1423
StyI	CCWWGG	5 cut(s)	29, 468, 1135, 1246, 1256
TaaI	ACNGT	7 cut(s)	105, 248, 781, 1039, 1066, 1340, 1471
TaiI	ACGT	3 cut(s)	201, 600, 696
TaqI	TCGA	5 cut(s)	146, 230, 240, 269, 882
TasI	AATT	4 cut(s)	337, 799, 1178, 1381
TatI	WGTACW	2 cut(s)	1146, 1374
TauI	GCSGC	2 cut(s)	647, 1035
TfiI	GAWTC	4 cut(s)	454, 649, 793, 858
Tru1I	TTAA	7 cut(s)	162, 341, 381, 549, 1224, 1440, 1543
Tru9I	TTAA	7 cut(s)	162, 341, 381, 549, 1224, 1440, 1543
TscAI	CASTG	7 cut(s)	83, 337, 381, 793, 1042, 1069, 1476
TseFI	GTSAC	2 cut(s)	1055, 1340
TseI	GCWGC	1 cut(s)	172
Tsp45I	GTSAC	2 cut(s)	1055, 1340
TspDTI	ATGAA	5 cut(s)	414, 850, 1036, 1285, 1394
TspRI	CASTG	7 cut(s)	83, 337, 381, 793, 1042, 1069, 1476
VneI	GTGCAC	1 cut(s)	494
VpaK11BI	GGWCC	4 cut(s)	559, 816, 896, 937
VspI	ATTAAT	1 cut(s)	162
XapI	RAATTY	1 cut(s)	337
XbaI	TCTAGA	1 cut(s)	475
XceI	RCATGY	2 cut(s)	396, 1348
XcmI	CCANNNNNNNNNTGG	1 cut(s)	311
XmiI	GTMKAC	2 cut(s)	240, 1252
XspI	CTAG	4 cut(s)	476, 1091, 1230, 1328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.