Prupe.7G190300_v2.0.a1

pectinesterase pectinesterase inhibitor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
18243290 .. 18246068
2779 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G190300.1

Sequence Viewer

Length: 1554 bp
ATGGCTTCTCATAATCCATTGCCTGCTGGGAAGCAACTGCTTTTGTTAGTCTTATTGTGTGCTTTTTTCAGCAGCAGCTTCATCCCATTTGCTAGCTGCAGCATCACAGATGATTTACAGACACAGTGTTTGAAGGTGTCTGCTACAGAATTTGCAGGCTCTTTGAAGGACACCATTGATGCTGTGCAACAGGTGGCCTCCATTCTCTCTCAGTTTGCAAATGCTTTCGGAGATTTTCGGCTTGCCAACGCCATTTCCGACTGCCTTGATTTGCTTGACTTCTCTGCTGATGAGTTGAACTGGTCTCTCTCTGCTTCCCAGAATCAGAAGGGCAAAAATAACAGCACTGGGAAGCTAAGTTCTGATCTGAGGACATGGTTGAGCGCTGCCCTTGTTAACCAGGACACATGCAGTAATGGGTTTGAAGGCACCAACAGCATCGTCCAAGGGCTGATCTCAGCTGGCCTTGGCCAAGTAACCTCTTTAGTCCAAGAACTTCTTACCCAAGTGCACCCAAATTCTAATCAGCAGGGGCCTAATGGCCAAATCCCTTCATGGGTTAAAACCAAAGATCGAAAACTACTTCAAGCCGATGGGGTCTCTGTTGATGCCATTGTAGCTCAAGATGGCACTGGAAATTTCACAAATGTGACGGATGCCGTGTTAGCAGCACCAGATTATAGCATGAGAAGATATGTTATATACATCAAGAGAGGCACATACAGAGAGAATGTGGAGATTAAGAAGAAAAAATGGAACCTAATGATGATTGGAGATGGTATGGATGCTACTATAATCTCTGGTAACAGAAGCTTTGTGGATGGCTGGACCACATTTAGATCTGCAACCTTTGCTGTTAGCGGCAGAGGGTTCATAGCAAGAGACATAACATTTGAGAACACAGCAGGACCAGAGAAGCACCAAGCAGTGGCACTAAGATCAGATTCTGACCTTTCAGTTTTCTACAGATGCAACATAAGGGGCTACCAAGACACACTCTACACACACACAATGCGCCAATTCTACAGAGACTGCAAAATCAGTGGCACTGTTGACTTCATTTTTGGTGATGCCACAGTTGTGTTCCAAAACTGCCAAATCCTAGCCAAAAAAGGCCTCCCAAACCAAAAGAACAGCATCACAGCCCAAGGCCGCAAGGACCCAAATGAGCCAACAGGAATTTCAATCCAATTCTGCAACATAACTGCAGATTCAGACTTGGAAGCTGCCTCAGTCAACTCCACACCCACTTACCTTGGCAGGCCATGGAAGCTATATTCAAGAACTGTAATTATGCAGTCTTTCTTGAGCAATGTCATAAGGCCTGAAGGGTGGCTTGAGTGGAATGGTGACTTTGCTTTGAATTCATTGTTTTATGGAGAGTACATGAATTATGGACCCGGGGCAGGTCTCGGTAGCCGGGTCAAGTGGCCCGGCTATCAAGTGTTCAACGAGTCTACTCAGGCCAAGAACTATACTGTGGCCCAGTTTATTGAAGGCAACCTGTGGTTGCCCTCTACTGGTGTCAAATATACTGCAGAATTTGGGGTTTAA

Protein Analysis

518

Amino Acids

56.81

Weight (kDa)

6.16

Isoelectric Point (pI)

22.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1397
AccB1I GGYRCC 1 cut(s) 428
AccB7I CCANNNNNTGG 1 cut(s) 928
AccI GTMKAC 1 cut(s) 1457
AciI CCGC 2 cut(s) 861, 1153
AcoI YGGCCR 2 cut(s) 469, 541
AcsI RAATTY 6 cut(s) 149, 517, 637, 1179, 1363, 1541
AcuI CTGAAG 1 cut(s) 1347
AfaI GTAC 1 cut(s) 1385
AfeI AGCGCT 1 cut(s) 385
AfiI CCNNNNNNNGG 4 cut(s) 556, 928, 1406, 1520
AjnI CCWGG 1 cut(s) 399
AjuI GAANNNNNNNTTGG 2 cut(s) 1165, 1197
AleI CACNNNNGTG 2 cut(s) 647, 1079
AloI GAACNNNNNNTCC 2 cut(s) 343, 375
AluBI AGCT 8 cut(s) 78, 96, 355, 461, 620, 813, 1226, 1273
AluI AGCT 8 cut(s) 78, 96, 355, 461, 620, 813, 1226, 1273
Alw21I GWGCWC 1 cut(s) 513
Alw26I GTCTC 5 cut(s) 309, 604, 876, 1023, 1415
Alw44I GTGCAC 1 cut(s) 509
AlwNI CAGNNNCTG 2 cut(s) 947, 1032
Ama87I CYCGRG 1 cut(s) 1400
Aor51HI AGCGCT 1 cut(s) 385
ApaLI GTGCAC 1 cut(s) 509
ApeKI GCWGC 7 cut(s) 72, 75, 96, 99, 386, 668, 1226
ApoI RAATTY 6 cut(s) 149, 517, 637, 1179, 1363, 1541
ArsI GACNNNNNNTTYG 6 cut(s) 112, 144, 875, 907, 1046, 1078
AspLEI GCGC 2 cut(s) 386, 1017
AspS9I GGNCC 7 cut(s) 533, 828, 908, 1159, 1397, 1431, 1483
AsuC2I CCSGG 4 cut(s) 1401, 1402, 1421, 1434
AsuHPI GGTGA 2 cut(s) 1079, 1361
AsuNHI GCTAGC 1 cut(s) 92
AvaI CYCGRG 1 cut(s) 1400
AvaII GGWCC 4 cut(s) 828, 908, 1159, 1397
BaeGI GKGCMC 1 cut(s) 513
BalI TGGCCA 2 cut(s) 471, 543
BanI GGYRCC 1 cut(s) 428
Bbv12I GWGCWC 1 cut(s) 513
BbvI GCAGC 7 cut(s) 83, 84, 87, 111, 373, 680, 1213
BccI CCATC 4 cut(s) 587, 620, 770, 815
BceAI ACGGC 1 cut(s) 644
BciT130I CCWGG 1 cut(s) 401
BcnI CCSGG 4 cut(s) 1401, 1402, 1421, 1434
BcoDI GTCTC 5 cut(s) 309, 604, 876, 1023, 1415
BfaI CTAG 2 cut(s) 93, 1103
BfmI CTRYAG 6 cut(s) 97, 144, 964, 1024, 1206, 1536
BfoI RGCGCY 1 cut(s) 387
BfuAI ACCTGC 1 cut(s) 1397
BglII AGATCT 1 cut(s) 839
BisI GCNGC 9 cut(s) 73, 76, 97, 100, 387, 669, 862, 1153, 1227
BlsI GCNGC 9 cut(s) 74, 77, 98, 101, 388, 670, 863, 1154, 1228
Bme1390I CCNGG 5 cut(s) 401, 1401, 1402, 1421, 1434
Bme18I GGWCC 4 cut(s) 828, 908, 1159, 1397
BmeT110I CYCGRG 1 cut(s) 1400
BmgT120I GGNCC 7 cut(s) 533, 828, 908, 1159, 1397, 1431, 1483
BmiI GGNNCC 5 cut(s) 430, 534, 758, 1161, 1399
BmrFI CCNGG 5 cut(s) 401, 1401, 1402, 1421, 1434
BmrI ACTGGG 2 cut(s) 357, 1480
BmsI GCATC 9 cut(s) 111, 169, 447, 598, 646, 775, 959, 1060, 1146
BmtI GCTAGC 1 cut(s) 96
BmuI ACTGGG 2 cut(s) 357, 1480
BpuEI CTTGAG 3 cut(s) 606, 1327, 1358
BpuMI CCSGG 4 cut(s) 1401, 1402, 1421, 1434
BsaI GGTCTC 3 cut(s) 309, 604, 1415
BsaJI CCNNGG 7 cut(s) 445, 466, 1147, 1255, 1265, 1400, 1401
Bsc4I CCNNNNNNNGG 4 cut(s) 556, 928, 1406, 1520
Bse1I ACTGG 5 cut(s) 305, 352, 637, 1486, 1525
Bse3DI GCAATG 2 cut(s) 17, 1318
BseBI CCWGG 1 cut(s) 401
BseDI CCNNGG 7 cut(s) 445, 466, 1147, 1255, 1265, 1400, 1401
BseGI GGATG 4 cut(s) 81, 661, 790, 826
BseLI CCNNNNNNNGG 4 cut(s) 556, 928, 1406, 1520
BseMI GCAATG 2 cut(s) 17, 1318
BseMII CTCAG 5 cut(s) 224, 359, 471, 1245, 1475
BseNI ACTGG 5 cut(s) 305, 352, 637, 1486, 1525
BseSI GKGCMC 1 cut(s) 513
BseXI GCAGC 7 cut(s) 83, 84, 87, 111, 373, 680, 1213
BseYI CCCAGC 1 cut(s) 26
BshNI GGYRCC 1 cut(s) 428
BsiHKAI GWGCWC 1 cut(s) 513
BsiHKCI CYCGRG 1 cut(s) 1400
BsiSI CCGG 3 cut(s) 1401, 1420, 1434
BslI CCNNNNNNNGG 4 cut(s) 556, 928, 1406, 1520
BsmAI GTCTC 5 cut(s) 309, 604, 876, 1023, 1415
Bso31I GGTCTC 3 cut(s) 309, 604, 1415
BsoBI CYCGRG 1 cut(s) 1400
Bsp1286I GDGCHC 1 cut(s) 513
Bsp143I GATC 5 cut(s) 364, 453, 571, 839, 938
Bsp19I CCATGG 1 cut(s) 1265
BspACI CCGC 2 cut(s) 861, 1153
BspCNI CTCAG 5 cut(s) 223, 360, 470, 1244, 1474
BspLI GGNNCC 5 cut(s) 430, 534, 758, 1161, 1399
BspMAI CTGCAG 3 cut(s) 101, 1210, 1540
BspMI ACCTGC 1 cut(s) 1397
BspOI GCTAGC 1 cut(s) 96
BspT107I GGYRCC 1 cut(s) 428
BspTNI GGTCTC 3 cut(s) 309, 604, 1415
BsrDI GCAATG 2 cut(s) 17, 1318
BsrI ACTGG 5 cut(s) 305, 352, 637, 1486, 1525
BssECI CCNNGG 7 cut(s) 445, 466, 1147, 1255, 1265, 1400, 1401
BssMI GATC 5 cut(s) 364, 453, 571, 839, 938
BssT1I CCWWGG 5 cut(s) 445, 466, 1147, 1255, 1265
Bst2UI CCWGG 1 cut(s) 401
Bst4CI ACNGT 5 cut(s) 126, 1051, 1078, 1288, 1480
BstAPI GCANNNNNTGC 1 cut(s) 851
BstC8I GCNNGC 6 cut(s) 24, 94, 157, 243, 463, 1262
BstDEI CTNAG 7 cut(s) 210, 356, 368, 457, 935, 1231, 1461
BstDSI CCRYGG 1 cut(s) 1265
BstF5I GGATG 4 cut(s) 81, 661, 790, 826
BstH2I RGCGCY 1 cut(s) 387
BstHHI GCGC 2 cut(s) 386, 1017
BstKTI GATC 5 cut(s) 367, 456, 574, 842, 941
BstMAI GTCTC 5 cut(s) 309, 604, 876, 1023, 1415
BstMBI GATC 5 cut(s) 364, 453, 571, 839, 938
BstMWI GCNNNNNNNGC 5 cut(s) 435, 617, 665, 851, 1270
BstNI CCWGG 1 cut(s) 401
BstNSI RCATGY 1 cut(s) 411
BstSCI CCNGG 5 cut(s) 399, 1399, 1400, 1419, 1432
BstSFI CTRYAG 6 cut(s) 97, 144, 964, 1024, 1206, 1536
BstSLI GKGCMC 1 cut(s) 513
BstV1I GCAGC 7 cut(s) 83, 84, 87, 111, 373, 680, 1213
BstX2I RGATCY 1 cut(s) 839
BstYI RGATCY 1 cut(s) 839
BtgI CCRYGG 1 cut(s) 1265
BtsCI GGATG 4 cut(s) 81, 661, 790, 826
BtsI GCAGTG 1 cut(s) 933
BtsIMutI CAGTG 6 cut(s) 131, 345, 630, 933, 1047, 1048
BveI ACCTGC 1 cut(s) 1397
Cac8I GCNNGC 6 cut(s) 24, 94, 157, 243, 463, 1262
CaiI CAGNNNCTG 2 cut(s) 947, 1032
CfoI GCGC 2 cut(s) 386, 1017
Cfr13I GGNCC 7 cut(s) 533, 828, 908, 1159, 1397, 1431, 1483
Cfr9I CCCGGG 1 cut(s) 1400
Csp6I GTAC 1 cut(s) 1384
CspCI CAANNNNNGTGG 4 cut(s) 1024, 1059, 1237, 1272
CviAII CATG 6 cut(s) 375, 408, 555, 685, 1266, 1387
CviQI GTAC 1 cut(s) 1384
DdeI CTNAG 7 cut(s) 210, 356, 368, 457, 935, 1231, 1461
DpnI GATC 5 cut(s) 366, 455, 573, 841, 940
DpnII GATC 5 cut(s) 364, 453, 571, 839, 938
EaeI YGGCCR 2 cut(s) 469, 541
Eco130I CCWWGG 5 cut(s) 445, 466, 1147, 1255, 1265
Eco147I AGGCCT 2 cut(s) 1116, 1324
Eco31I GGTCTC 3 cut(s) 309, 604, 1415
Eco47I GGWCC 4 cut(s) 828, 908, 1159, 1397
Eco47III AGCGCT 1 cut(s) 385
Eco57I CTGAAG 1 cut(s) 1347
Eco88I CYCGRG 1 cut(s) 1400
EcoO109I RGGNCCY 2 cut(s) 533, 1159
EcoRI GAATTC 1 cut(s) 1363
EcoRII CCWGG 1 cut(s) 399
EcoT14I CCWWGG 5 cut(s) 445, 466, 1147, 1255, 1265
ErhI CCWWGG 5 cut(s) 445, 466, 1147, 1255, 1265
FaeI CATG 6 cut(s) 378, 411, 558, 688, 1269, 1390
FalI AAGNNNNNCTT 4 cut(s) 483, 515, 1320, 1352
FatI CATG 6 cut(s) 374, 407, 554, 684, 1265, 1386
FblI GTMKAC 1 cut(s) 1457
Fnu4HI GCNGC 9 cut(s) 73, 76, 97, 100, 387, 669, 862, 1153, 1227
FokI GGATG 4 cut(s) 68, 668, 797, 833
Fsp4HI GCNGC 9 cut(s) 73, 76, 97, 100, 387, 669, 862, 1153, 1227
FspBI CTAG 2 cut(s) 93, 1103
GlaI GCGC 2 cut(s) 385, 1016
GluI GCNGC 9 cut(s) 73, 76, 97, 100, 387, 669, 862, 1153, 1227
GsaI CCCAGC 1 cut(s) 30
HaeII RGCGCY 1 cut(s) 387
HapII CCGG 3 cut(s) 1401, 1420, 1434
HhaI GCGC 2 cut(s) 386, 1017
Hin1II CATG 6 cut(s) 378, 411, 558, 688, 1269, 1390
Hin6I GCGC 2 cut(s) 384, 1015
HinP1I GCGC 2 cut(s) 384, 1015
HincII GTYRAC 3 cut(s) 397, 1054, 1237
HindII GTYRAC 3 cut(s) 397, 1054, 1237
HindIII AAGCTT 1 cut(s) 811
HinfI GANTC 4 cut(s) 322, 944, 1211, 1454
HpaI GTTAAC 1 cut(s) 397
HpaII CCGG 3 cut(s) 1401, 1420, 1434
HphI GGTGA 2 cut(s) 1079, 1361
Hpy166II GTNNAC 5 cut(s) 397, 511, 1054, 1237, 1458
Hpy188I TCNGA 8 cut(s) 230, 259, 327, 364, 369, 943, 949, 1216
Hpy188III TCNNGA 4 cut(s) 623, 709, 1281, 1306
Hpy8I GTNNAC 5 cut(s) 397, 511, 1054, 1237, 1458
HpyAV CCTTC 7 cut(s) 127, 160, 322, 419, 561, 1322, 1490
HpyCH4III ACNGT 5 cut(s) 126, 1051, 1078, 1288, 1480
HpyF10VI GCNNNNNNNGC 5 cut(s) 435, 617, 665, 851, 1270
HpyF3I CTNAG 7 cut(s) 210, 356, 368, 457, 935, 1231, 1461
Hsp92II CATG 6 cut(s) 378, 411, 558, 688, 1269, 1390
HspAI GCGC 2 cut(s) 384, 1015
KspAI GTTAAC 1 cut(s) 397
Kzo9I GATC 5 cut(s) 364, 453, 571, 839, 938
Lsp1109I GCAGC 7 cut(s) 83, 84, 87, 111, 373, 680, 1213
LweI GCATC 9 cut(s) 111, 169, 447, 598, 646, 775, 959, 1060, 1146
MaeI CTAG 2 cut(s) 93, 1103
MaeIII GTNAC 4 cut(s) 475, 649, 803, 1349
MalI GATC 5 cut(s) 366, 455, 573, 841, 940
MboI GATC 5 cut(s) 364, 453, 571, 839, 938
MboII GAAGA 2 cut(s) 702, 757
MflI RGATCY 1 cut(s) 839
MhlI GDGCHC 1 cut(s) 513
MlsI TGGCCA 2 cut(s) 471, 543
MluNI TGGCCA 2 cut(s) 471, 543
MlyI GAGTC 1 cut(s) 1463
MmeI TCCRAC 1 cut(s) 282
MnlI CCTC 8 cut(s) 208, 363, 490, 707, 860, 1127, 1240, 1525
Mox20I TGGCCA 2 cut(s) 471, 543
MscI TGGCCA 2 cut(s) 471, 543
MseI TTAA 4 cut(s) 396, 561, 741, 1552
MslI CAYNNNNRTG 2 cut(s) 647, 1079
Msp20I TGGCCA 2 cut(s) 471, 543
MspA1I CMGCKG 1 cut(s) 461
MspI CCGG 3 cut(s) 1401, 1420, 1434
MspR9I CCNGG 5 cut(s) 401, 1401, 1402, 1421, 1434
MvaI CCWGG 1 cut(s) 401
MwoI GCNNNNNNNGC 5 cut(s) 435, 617, 665, 851, 1270
NciI CCSGG 4 cut(s) 1401, 1402, 1421, 1434
NcoI CCATGG 1 cut(s) 1265
NdeII GATC 5 cut(s) 364, 453, 571, 839, 938
NheI GCTAGC 1 cut(s) 92
NlaIII CATG 6 cut(s) 378, 411, 558, 688, 1269, 1390
NlaIV GGNNCC 5 cut(s) 430, 534, 758, 1161, 1399
NmuCI GTSAC 2 cut(s) 649, 1349
NspI RCATGY 1 cut(s) 411
OliI CACNNNNGTG 2 cut(s) 647, 1079
PceI AGGCCT 2 cut(s) 1116, 1324
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PfeI GAWTC 3 cut(s) 322, 944, 1211
PflMI CCANNNNNTGG 1 cut(s) 928
PkrI GCNGC 9 cut(s) 74, 77, 98, 101, 388, 670, 863, 1154, 1228
PleI GAGTC 1 cut(s) 1462
PpsI GAGTC 1 cut(s) 1462
PpuMI RGGWCCY 1 cut(s) 1159
Psp5II RGGWCCY 1 cut(s) 1159
Psp6I CCWGG 1 cut(s) 399
PspFI CCCAGC 1 cut(s) 26
PspGI CCWGG 1 cut(s) 399
PspN4I GGNNCC 5 cut(s) 430, 534, 758, 1161, 1399
PspPI GGNCC 7 cut(s) 533, 828, 908, 1159, 1397, 1431, 1483
PspPPI RGGWCCY 1 cut(s) 1159
PstI CTGCAG 3 cut(s) 101, 1210, 1540
PstNI CAGNNNCTG 2 cut(s) 947, 1032
PsuI RGATCY 1 cut(s) 839
PvuII CAGCTG 1 cut(s) 461
RsaI GTAC 1 cut(s) 1385
RsaNI GTAC 1 cut(s) 1384
RseI CAYNNNNRTG 2 cut(s) 647, 1079
SaqAI TTAA 4 cut(s) 396, 561, 741, 1552
SatI GCNGC 9 cut(s) 73, 76, 97, 100, 387, 669, 862, 1153, 1227
Sau3AI GATC 5 cut(s) 364, 453, 571, 839, 938
Sau96I GGNCC 7 cut(s) 533, 828, 908, 1159, 1397, 1431, 1483
SchI GAGTC 1 cut(s) 1463
ScrFI CCNGG 5 cut(s) 401, 1401, 1402, 1421, 1434
SduI GDGCHC 1 cut(s) 513
SfaNI GCATC 9 cut(s) 111, 169, 447, 598, 646, 775, 959, 1060, 1146
SfcI CTRYAG 6 cut(s) 97, 144, 964, 1024, 1206, 1536
SinI GGWCC 4 cut(s) 828, 908, 1159, 1397
SmaI CCCGGG 1 cut(s) 1402
SmiMI CAYNNNNRTG 2 cut(s) 647, 1079
SmlI CTYRAG 3 cut(s) 621, 1306, 1337
SmoI CTYRAG 3 cut(s) 621, 1306, 1337
SseBI AGGCCT 2 cut(s) 1116, 1324
SsiI CCGC 2 cut(s) 861, 1153
SspMI CTAG 2 cut(s) 93, 1103
StuI AGGCCT 2 cut(s) 1116, 1324
StyD4I CCNGG 5 cut(s) 399, 1399, 1400, 1419, 1432
StyI CCWWGG 5 cut(s) 445, 466, 1147, 1255, 1265
TaaI ACNGT 5 cut(s) 126, 1051, 1078, 1288, 1480
TaqI TCGA 1 cut(s) 574
TatI WGTACW 1 cut(s) 1383
TauI GCSGC 2 cut(s) 864, 1155
TfiI GAWTC 3 cut(s) 322, 944, 1211
Tru1I TTAA 4 cut(s) 396, 561, 741, 1552
Tru9I TTAA 4 cut(s) 396, 561, 741, 1552
TscAI CASTG 6 cut(s) 131, 352, 637, 933, 1048, 1054
TseFI GTSAC 2 cut(s) 649, 1349
TseI GCWGC 7 cut(s) 72, 75, 96, 99, 386, 668, 1226
Tsp45I GTSAC 2 cut(s) 649, 1349
TspDTI ATGAA 6 cut(s) 70, 543, 862, 1048, 1356, 1403
TspGWI ACGGA 1 cut(s) 668
TspMI CCCGGG 1 cut(s) 1400
TspRI CASTG 6 cut(s) 131, 352, 637, 933, 1048, 1054
Van91I CCANNNNNTGG 1 cut(s) 928
VneI GTGCAC 1 cut(s) 509
VpaK11BI GGWCC 4 cut(s) 828, 908, 1159, 1397
XapI RAATTY 6 cut(s) 149, 517, 637, 1179, 1363, 1541
XceI RCATGY 1 cut(s) 411
XmaI CCCGGG 1 cut(s) 1400
XmiI GTMKAC 1 cut(s) 1457
XspI CTAG 2 cut(s) 93, 1103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.