pectinesterase pectinesterase inhibitor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G43270 AT4G33220 AT4G33220 |
| fragaria_vesca | FvH4_1g09610 |
| malus_domestica | MD02G1104600.v1.1 MD02G1105100.v1.1 MD15G1224900.v1.1 |
| prunus_persica | Prupe.7G190300_v2.0.a1 |
| pyrus_communis | pycom02g08260 |
| rosa_chinensis | RchiOBHm_Chr2g0096461 |
| rosa_laevigata | RLG00000016641 |
| rosa_multiflora | Rmu_co8263641.1_g000001 Rmu_sc0004096.1_g000019 Rmu_sc0029740.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00145620 |
| rosa_rugosa | Rorug02G0057900 |
| rosa_samantha | Rh2AG104800 Rh2BG107000 Rh2CG108800 Rh2DG108000 |
| rosa_wichuraiana | Rw2G008100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 608 |
| AccB1I | GGYRCC | 2 cut(s) | 407, 608 |
| AccBSI | CCGCTC | 1 cut(s) | 1382 |
| AccI | GTMKAC | 1 cut(s) | 1433 |
| AciI | CCGC | 5 cut(s) | 390, 670, 1023, 1325, 1382 |
| AclI | AACGTT | 1 cut(s) | 869 |
| AclWI | GGATC | 2 cut(s) | 1072, 1406 |
| AcsI | RAATTY | 3 cut(s) | 128, 496, 616 |
| AfaI | GTAC | 3 cut(s) | 610, 1027, 1361 |
| AfeI | AGCGCT | 1 cut(s) | 364 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 535, 919, 1131, 1308, 1382, 1496 |
| AgsI | TTSAA | 6 cut(s) | 112, 277, 404, 1257, 1316, 1472 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 97 |
| AhlI | ACTAGT | 1 cut(s) | 370 |
| AjnI | CCWGG | 5 cut(s) | 378, 507, 900, 1375, 1408 |
| AleI | CACNNNNGTG | 2 cut(s) | 485, 626 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 322, 354 |
| AluBI | AGCT | 4 cut(s) | 75, 81, 792, 1249 |
| AluI | AGCT | 4 cut(s) | 75, 81, 792, 1249 |
| Alw21I | GWGCWC | 2 cut(s) | 492, 1343 |
| Alw26I | GTCTC | 2 cut(s) | 439, 855 |
| Alw44I | GTGCAC | 1 cut(s) | 488 |
| AlwI | GGATC | 2 cut(s) | 1072, 1406 |
| Ama87I | CYCGRG | 1 cut(s) | 1301 |
| Aor51HI | AGCGCT | 1 cut(s) | 364 |
| ApaLI | GTGCAC | 1 cut(s) | 488 |
| ApeKI | GCWGC | 6 cut(s) | 48, 75, 78, 166, 365, 647 |
| ApoI | RAATTY | 3 cut(s) | 128, 496, 616 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 854, 886, 1025, 1057 |
| Asp718I | GGTACC | 1 cut(s) | 608 |
| AspLEI | GCGC | 3 cut(s) | 365, 652, 996 |
| AspS9I | GGNCC | 9 cut(s) | 282, 512, 807, 887, 928, 1299, 1373, 1384, 1459 |
| AsuC2I | CCSGG | 1 cut(s) | 613 |
| AsuHPI | GGTGA | 5 cut(s) | 169, 404, 497, 1058, 1367 |
| AsuII | TTCGAA | 1 cut(s) | 873 |
| AsuNHI | GCTAGC | 1 cut(s) | 71 |
| AvaI | CYCGRG | 1 cut(s) | 1301 |
| AvaII | GGWCC | 4 cut(s) | 282, 512, 807, 928 |
| BaeGI | GKGCMC | 1 cut(s) | 492 |
| BanI | GGYRCC | 2 cut(s) | 407, 608 |
| Bbv12I | GWGCWC | 2 cut(s) | 492, 1343 |
| BbvI | GCAGC | 6 cut(s) | 35, 62, 90, 178, 352, 659 |
| BccI | CCATC | 4 cut(s) | 599, 625, 749, 794 |
| BceAI | ACGGC | 3 cut(s) | 623, 897, 1277 |
| BciT130I | CCWGG | 5 cut(s) | 380, 509, 902, 1377, 1410 |
| BcnI | CCSGG | 1 cut(s) | 613 |
| BcoDI | GTCTC | 2 cut(s) | 439, 855 |
| BcuI | ACTAGT | 1 cut(s) | 370 |
| BfaI | CTAG | 3 cut(s) | 72, 371, 1082 |
| BfmI | CTRYAG | 5 cut(s) | 76, 943, 1003, 1185, 1512 |
| BfoI | RGCGCY | 2 cut(s) | 366, 653 |
| BisI | GCNGC | 7 cut(s) | 49, 76, 79, 167, 366, 648, 670 |
| BlsI | GCNGC | 7 cut(s) | 50, 77, 80, 168, 367, 649, 671 |
| Bme1390I | CCNGG | 6 cut(s) | 380, 509, 613, 902, 1377, 1410 |
| Bme18I | GGWCC | 4 cut(s) | 282, 512, 807, 928 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 97 |
| BmeT110I | CYCGRG | 1 cut(s) | 1301 |
| BmgT120I | GGNCC | 9 cut(s) | 282, 512, 807, 887, 928, 1299, 1373, 1384, 1459 |
| BmiI | GGNNCC | 5 cut(s) | 284, 409, 513, 610, 737 |
| BmrFI | CCNGG | 6 cut(s) | 380, 509, 613, 902, 1377, 1410 |
| BmsI | GCATC | 8 cut(s) | 131, 148, 577, 625, 754, 938, 1039, 1180 |
| BmtI | GCTAGC | 1 cut(s) | 75 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1371, 1403 |
| BpmI | CTGGAG | 1 cut(s) | 1398 |
| Bpu14I | TTCGAA | 1 cut(s) | 873 |
| BpuEI | CTTGAG | 3 cut(s) | 468, 1303, 1422 |
| BpuMI | CCSGG | 1 cut(s) | 613 |
| Bsa29I | ATCGAT | 1 cut(s) | 798 |
| BsaAI | YACGTR | 1 cut(s) | 676 |
| BsaI | GGTCTC | 1 cut(s) | 439 |
| BsaJI | CCNNGG | 6 cut(s) | 508, 1126, 1231, 1241, 1302, 1387 |
| BsaWI | WCCGGW | 1 cut(s) | 1154 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 535, 919, 1131, 1308, 1382, 1496 |
| Bse1I | ACTGG | 5 cut(s) | 284, 445, 997, 1168, 1501 |
| Bse3DI | GCAATG | 1 cut(s) | 1294 |
| BseBI | CCWGG | 5 cut(s) | 380, 509, 902, 1377, 1410 |
| BseCI | ATCGAT | 1 cut(s) | 798 |
| BseDI | CCNNGG | 6 cut(s) | 508, 1126, 1231, 1241, 1302, 1387 |
| BseGI | GGATG | 4 cut(s) | 122, 592, 640, 769 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 535, 919, 1131, 1308, 1382, 1496 |
| BseMI | GCAATG | 1 cut(s) | 1294 |
| BseMII | CTCAG | 2 cut(s) | 203, 338 |
| BseNI | ACTGG | 5 cut(s) | 284, 445, 997, 1168, 1501 |
| BseRI | GAGGAG | 1 cut(s) | 467 |
| BseSI | GKGCMC | 1 cut(s) | 492 |
| BseXI | GCAGC | 6 cut(s) | 35, 62, 90, 178, 352, 659 |
| BsgI | GTGCAG | 2 cut(s) | 185, 351 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1155 |
| BshNI | GGYRCC | 2 cut(s) | 407, 608 |
| BshVI | ATCGAT | 1 cut(s) | 798 |
| BsiEI | CGRYCG | 1 cut(s) | 1155 |
| BsiHKAI | GWGCWC | 2 cut(s) | 492, 1343 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1301 |
| BsiSI | CCGG | 5 cut(s) | 612, 653, 1132, 1155, 1396 |
| BslFI | GGGAC | 2 cut(s) | 161, 268 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 535, 919, 1131, 1308, 1382, 1496 |
| BsmAI | GTCTC | 2 cut(s) | 439, 855 |
| BsmFI | GGGAC | 2 cut(s) | 161, 268 |
| BsmI | GAATGC | 1 cut(s) | 1327 |
| Bso31I | GGTCTC | 1 cut(s) | 439 |
| BsoBI | CYCGRG | 1 cut(s) | 1301 |
| Bsp119I | TTCGAA | 1 cut(s) | 873 |
| Bsp1286I | GDGCHC | 2 cut(s) | 492, 1343 |
| Bsp143I | GATC | 8 cut(s) | 343, 502, 550, 717, 818, 917, 1077, 1398 |
| BspACI | CCGC | 5 cut(s) | 390, 670, 1023, 1325, 1382 |
| BspCNI | CTCAG | 2 cut(s) | 202, 339 |
| BspDI | ATCGAT | 1 cut(s) | 798 |
| BspLI | GGNNCC | 5 cut(s) | 284, 409, 513, 610, 737 |
| BspMAI | CTGCAG | 3 cut(s) | 80, 1189, 1516 |
| BspOI | GCTAGC | 1 cut(s) | 75 |
| BspPI | GGATC | 2 cut(s) | 1072, 1406 |
| BspT104I | TTCGAA | 1 cut(s) | 873 |
| BspT107I | GGYRCC | 2 cut(s) | 407, 608 |
| BspTNI | GGTCTC | 1 cut(s) | 439 |
| BsrBI | CCGCTC | 1 cut(s) | 1382 |
| BsrDI | GCAATG | 1 cut(s) | 1294 |
| BsrI | ACTGG | 5 cut(s) | 284, 445, 997, 1168, 1501 |
| BssECI | CCNNGG | 6 cut(s) | 508, 1126, 1231, 1241, 1302, 1387 |
| BssMI | GATC | 8 cut(s) | 343, 502, 550, 717, 818, 917, 1077, 1398 |
| BssT1I | CCWWGG | 3 cut(s) | 1126, 1231, 1241 |
| Bst2UI | CCWGG | 5 cut(s) | 380, 509, 902, 1377, 1410 |
| Bst4CI | ACNGT | 8 cut(s) | 99, 521, 575, 1030, 1057, 1073, 1264, 1456 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 830 |
| BstBAI | YACGTR | 1 cut(s) | 676 |
| BstBI | TTCGAA | 1 cut(s) | 873 |
| BstC8I | GCNNGC | 4 cut(s) | 73, 120, 136, 1384 |
| BstDEI | CTNAG | 5 cut(s) | 189, 335, 347, 463, 914 |
| BstEII | GGTNACC | 2 cut(s) | 175, 1485 |
| BstF5I | GGATG | 4 cut(s) | 122, 592, 640, 769 |
| BstH2I | RGCGCY | 2 cut(s) | 366, 653 |
| BstHHI | GCGC | 3 cut(s) | 365, 652, 996 |
| BstKTI | GATC | 8 cut(s) | 346, 505, 553, 720, 821, 920, 1080, 1401 |
| BstMAI | GTCTC | 2 cut(s) | 439, 855 |
| BstMBI | GATC | 8 cut(s) | 343, 502, 550, 717, 818, 917, 1077, 1398 |
| BstMCI | CGRYCG | 1 cut(s) | 1155 |
| BstNI | CCWGG | 5 cut(s) | 380, 509, 902, 1377, 1410 |
| BstNSI | RCATGY | 1 cut(s) | 390 |
| BstPI | GGTNACC | 2 cut(s) | 175, 1485 |
| BstSCI | CCNGG | 6 cut(s) | 378, 507, 611, 900, 1375, 1408 |
| BstSFI | CTRYAG | 5 cut(s) | 76, 943, 1003, 1185, 1512 |
| BstSLI | GKGCMC | 1 cut(s) | 492 |
| BstSNI | TACGTA | 1 cut(s) | 676 |
| BstV1I | GCAGC | 6 cut(s) | 35, 62, 90, 178, 352, 659 |
| BstX2I | RGATCY | 1 cut(s) | 1077 |
| BstYI | RGATCY | 1 cut(s) | 1077 |
| Bsu15I | ATCGAT | 1 cut(s) | 798 |
| BsuTUI | ATCGAT | 1 cut(s) | 798 |
| BtsCI | GGATG | 4 cut(s) | 122, 592, 640, 769 |
| Cac8I | GCNNGC | 4 cut(s) | 73, 120, 136, 1384 |
| CfoI | GCGC | 3 cut(s) | 365, 652, 996 |
| Cfr13I | GGNCC | 9 cut(s) | 282, 512, 807, 887, 928, 1299, 1373, 1384, 1459 |
| ClaI | ATCGAT | 1 cut(s) | 798 |
| CseI | GACGC | 1 cut(s) | 1105 |
| Csp6I | GTAC | 3 cut(s) | 609, 1026, 1360 |
| CviAII | CATG | 4 cut(s) | 354, 387, 664, 1363 |
| CviQI | GTAC | 3 cut(s) | 609, 1026, 1360 |
| DdeI | CTNAG | 5 cut(s) | 189, 335, 347, 463, 914 |
| DpnI | GATC | 8 cut(s) | 345, 504, 552, 719, 820, 919, 1079, 1400 |
| DpnII | GATC | 8 cut(s) | 343, 502, 550, 717, 818, 917, 1077, 1398 |
| DriI | GACNNNNNGTC | 1 cut(s) | 97 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 97 |
| Eco105I | TACGTA | 1 cut(s) | 676 |
| Eco130I | CCWWGG | 3 cut(s) | 1126, 1231, 1241 |
| Eco147I | AGGCCT | 2 cut(s) | 1095, 1240 |
| Eco31I | GGTCTC | 1 cut(s) | 439 |
| Eco47I | GGWCC | 4 cut(s) | 282, 512, 807, 928 |
| Eco47III | AGCGCT | 1 cut(s) | 364 |
| Eco88I | CYCGRG | 1 cut(s) | 1301 |
| Eco91I | GGTNACC | 2 cut(s) | 175, 1485 |
| EcoO109I | RGGNCCY | 1 cut(s) | 512 |
| EcoO65I | GGTNACC | 2 cut(s) | 175, 1485 |
| EcoRI | GAATTC | 1 cut(s) | 496 |
| EcoRII | CCWGG | 5 cut(s) | 378, 507, 900, 1375, 1408 |
| EcoT14I | CCWWGG | 3 cut(s) | 1126, 1231, 1241 |
| ErhI | CCWWGG | 3 cut(s) | 1126, 1231, 1241 |
| FaeI | CATG | 4 cut(s) | 357, 390, 667, 1366 |
| FaqI | GGGAC | 2 cut(s) | 161, 268 |
| FatI | CATG | 4 cut(s) | 353, 386, 663, 1362 |
| FauI | CCCGC | 1 cut(s) | 1375 |
| FblI | GTMKAC | 1 cut(s) | 1433 |
| Fnu4HI | GCNGC | 7 cut(s) | 49, 76, 79, 167, 366, 648, 670 |
| FokI | GGATG | 4 cut(s) | 109, 599, 647, 776 |
| Fsp4HI | GCNGC | 7 cut(s) | 49, 76, 79, 167, 366, 648, 670 |
| FspBI | CTAG | 3 cut(s) | 72, 371, 1082 |
| GlaI | GCGC | 3 cut(s) | 364, 651, 995 |
| GluI | GCNGC | 7 cut(s) | 49, 76, 79, 167, 366, 648, 670 |
| GsuI | CTGGAG | 1 cut(s) | 1398 |
| HaeII | RGCGCY | 2 cut(s) | 366, 653 |
| HapII | CCGG | 5 cut(s) | 612, 653, 1132, 1155, 1396 |
| HgaI | GACGC | 1 cut(s) | 1105 |
| HhaI | GCGC | 3 cut(s) | 365, 652, 996 |
| Hin1II | CATG | 4 cut(s) | 357, 390, 667, 1366 |
| Hin6I | GCGC | 3 cut(s) | 363, 650, 994 |
| HinP1I | GCGC | 3 cut(s) | 363, 650, 994 |
| HincII | GTYRAC | 3 cut(s) | 376, 1033, 1213 |
| HindII | GTYRAC | 3 cut(s) | 376, 1033, 1213 |
| HinfI | GANTC | 6 cut(s) | 60, 923, 1102, 1158, 1419, 1430 |
| HpaI | GTTAAC | 1 cut(s) | 376 |
| HpaII | CCGG | 5 cut(s) | 612, 653, 1132, 1155, 1396 |
| HphI | GGTGA | 5 cut(s) | 169, 404, 497, 1058, 1367 |
| Hpy166II | GTNNAC | 5 cut(s) | 376, 490, 1033, 1213, 1434 |
| Hpy188III | TCNNGA | 5 cut(s) | 688, 721, 780, 1257, 1282 |
| Hpy8I | GTNNAC | 5 cut(s) | 376, 490, 1033, 1213, 1434 |
| Hpy99I | CGWCG | 1 cut(s) | 575 |
| HpyAV | CCTTC | 2 cut(s) | 398, 1466 |
| HpyCH4III | ACNGT | 8 cut(s) | 99, 521, 575, 1030, 1057, 1073, 1264, 1456 |
| HpyCH4IV | ACGT | 3 cut(s) | 533, 675, 869 |
| HpyF3I | CTNAG | 5 cut(s) | 189, 335, 347, 463, 914 |
| HpySE526I | ACGT | 3 cut(s) | 533, 675, 869 |
| Hsp92II | CATG | 4 cut(s) | 357, 390, 667, 1366 |
| HspAI | GCGC | 3 cut(s) | 363, 650, 994 |
| KpnI | GGTACC | 1 cut(s) | 612 |
| KspAI | GTTAAC | 1 cut(s) | 376 |
| Kzo9I | GATC | 8 cut(s) | 343, 502, 550, 717, 818, 917, 1077, 1398 |
| LmnI | GCTCC | 1 cut(s) | 1379 |
| Lsp1109I | GCAGC | 6 cut(s) | 35, 62, 90, 178, 352, 659 |
| LweI | GCATC | 8 cut(s) | 131, 148, 577, 625, 754, 938, 1039, 1180 |
| MaeI | CTAG | 3 cut(s) | 72, 371, 1082 |
| MaeII | ACGT | 3 cut(s) | 533, 675, 869 |
| MaeIII | GTNAC | 7 cut(s) | 175, 317, 392, 454, 1117, 1200, 1485 |
| MalI | GATC | 8 cut(s) | 345, 504, 552, 719, 820, 919, 1079, 1400 |
| MbiI | CCGCTC | 1 cut(s) | 1382 |
| MboI | GATC | 8 cut(s) | 343, 502, 550, 717, 818, 917, 1077, 1398 |
| MboII | GAAGA | 3 cut(s) | 560, 736, 1120 |
| MflI | RGATCY | 1 cut(s) | 1077 |
| MhlI | GDGCHC | 2 cut(s) | 492, 1343 |
| MluCI | AATT | 5 cut(s) | 128, 496, 616, 1366, 1463 |
| MlyI | GAGTC | 2 cut(s) | 1428, 1439 |
| MmeI | TCCRAC | 2 cut(s) | 261, 785 |
| MseI | TTAA | 3 cut(s) | 375, 540, 1425 |
| MslI | CAYNNNNRTG | 2 cut(s) | 485, 626 |
| MspI | CCGG | 5 cut(s) | 612, 653, 1132, 1155, 1396 |
| MspR9I | CCNGG | 6 cut(s) | 380, 509, 613, 902, 1377, 1410 |
| Mva1269I | GAATGC | 1 cut(s) | 1327 |
| MvaI | CCWGG | 5 cut(s) | 380, 509, 902, 1377, 1410 |
| NciI | CCSGG | 1 cut(s) | 613 |
| NdeII | GATC | 8 cut(s) | 343, 502, 550, 717, 818, 917, 1077, 1398 |
| NheI | GCTAGC | 1 cut(s) | 71 |
| NlaIII | CATG | 4 cut(s) | 357, 390, 667, 1366 |
| NlaIV | GGNNCC | 5 cut(s) | 284, 409, 513, 610, 737 |
| NmuCI | GTSAC | 3 cut(s) | 175, 392, 1117 |
| NspI | RCATGY | 1 cut(s) | 390 |
| NspV | TTCGAA | 1 cut(s) | 873 |
| OliI | CACNNNNGTG | 2 cut(s) | 485, 626 |
| PceI | AGGCCT | 2 cut(s) | 1095, 1240 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 234 |
| PctI | GAATGC | 1 cut(s) | 1327 |
| PfeI | GAWTC | 4 cut(s) | 60, 923, 1102, 1158 |
| PflFI | GACNNNGTC | 1 cut(s) | 575 |
| PkrI | GCNGC | 7 cut(s) | 50, 77, 80, 168, 367, 649, 671 |
| PleI | GAGTC | 2 cut(s) | 1427, 1438 |
| PpsI | GAGTC | 2 cut(s) | 1427, 1438 |
| Ppu21I | YACGTR | 1 cut(s) | 676 |
| PpuMI | RGGWCCY | 1 cut(s) | 512 |
| Psp1406I | AACGTT | 1 cut(s) | 869 |
| Psp5II | RGGWCCY | 1 cut(s) | 512 |
| Psp6I | CCWGG | 5 cut(s) | 378, 507, 900, 1375, 1408 |
| PspEI | GGTNACC | 2 cut(s) | 175, 1485 |
| PspGI | CCWGG | 5 cut(s) | 378, 507, 900, 1375, 1408 |
| PspN4I | GGNNCC | 5 cut(s) | 284, 409, 513, 610, 737 |
| PspPI | GGNCC | 9 cut(s) | 282, 512, 807, 887, 928, 1299, 1373, 1384, 1459 |
| PspPPI | RGGWCCY | 1 cut(s) | 512 |
| PstI | CTGCAG | 3 cut(s) | 80, 1189, 1516 |
| PsuI | RGATCY | 1 cut(s) | 1077 |
| PsyI | GACNNNGTC | 1 cut(s) | 575 |
| RsaI | GTAC | 3 cut(s) | 610, 1027, 1361 |
| RsaNI | GTAC | 3 cut(s) | 609, 1026, 1360 |
| RseI | CAYNNNNRTG | 2 cut(s) | 485, 626 |
| SaqAI | TTAA | 3 cut(s) | 375, 540, 1425 |
| SatI | GCNGC | 7 cut(s) | 49, 76, 79, 167, 366, 648, 670 |
| Sau3AI | GATC | 8 cut(s) | 343, 502, 550, 717, 818, 917, 1077, 1398 |
| Sau96I | GGNCC | 9 cut(s) | 282, 512, 807, 887, 928, 1299, 1373, 1384, 1459 |
| SchI | GAGTC | 2 cut(s) | 1428, 1439 |
| ScrFI | CCNGG | 6 cut(s) | 380, 509, 613, 902, 1377, 1410 |
| SduI | GDGCHC | 2 cut(s) | 492, 1343 |
| SfaNI | GCATC | 8 cut(s) | 131, 148, 577, 625, 754, 938, 1039, 1180 |
| SfcI | CTRYAG | 5 cut(s) | 76, 943, 1003, 1185, 1512 |
| SfuI | TTCGAA | 1 cut(s) | 873 |
| SinI | GGWCC | 4 cut(s) | 282, 512, 807, 928 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 485, 626 |
| SmlI | CTYRAG | 3 cut(s) | 483, 1282, 1437 |
| SmoI | CTYRAG | 3 cut(s) | 483, 1282, 1437 |
| SnaBI | TACGTA | 1 cut(s) | 676 |
| SpeI | ACTAGT | 1 cut(s) | 370 |
| Sse9I | AATT | 5 cut(s) | 128, 496, 616, 1366, 1463 |
| SseBI | AGGCCT | 2 cut(s) | 1095, 1240 |
| SsiI | CCGC | 5 cut(s) | 390, 670, 1023, 1325, 1382 |
| SspMI | CTAG | 3 cut(s) | 72, 371, 1082 |
| StuI | AGGCCT | 2 cut(s) | 1095, 1240 |
| StyD4I | CCNGG | 6 cut(s) | 378, 507, 611, 900, 1375, 1408 |
| StyI | CCWWGG | 3 cut(s) | 1126, 1231, 1241 |
| TaaI | ACNGT | 8 cut(s) | 99, 521, 575, 1030, 1057, 1073, 1264, 1456 |
| TaiI | ACGT | 3 cut(s) | 536, 678, 872 |
| TaqI | TCGA | 5 cut(s) | 553, 787, 798, 817, 873 |
| TasI | AATT | 5 cut(s) | 128, 496, 616, 1366, 1463 |
| TatI | WGTACW | 1 cut(s) | 1359 |
| TauI | GCSGC | 1 cut(s) | 672 |
| TfiI | GAWTC | 4 cut(s) | 60, 923, 1102, 1158 |
| Tru1I | TTAA | 3 cut(s) | 375, 540, 1425 |
| Tru9I | TTAA | 3 cut(s) | 375, 540, 1425 |
| TseFI | GTSAC | 3 cut(s) | 175, 392, 1117 |
| TseI | GCWGC | 6 cut(s) | 48, 75, 78, 166, 365, 647 |
| Tsp45I | GTSAC | 3 cut(s) | 175, 392, 1117 |
| TspDTI | ATGAA | 3 cut(s) | 841, 1379, 1460 |
| Tth111I | GACNNNGTC | 1 cut(s) | 575 |
| VneI | GTGCAC | 1 cut(s) | 488 |
| VpaK11BI | GGWCC | 4 cut(s) | 282, 512, 807, 928 |
| XapI | RAATTY | 3 cut(s) | 128, 496, 616 |
| XceI | RCATGY | 1 cut(s) | 390 |
| XmiI | GTMKAC | 1 cut(s) | 1433 |
| XspI | CTAG | 3 cut(s) | 72, 371, 1082 |