Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0010203

Physical Location & Seq

Genomic Coordinates Forward (+)

13066521 .. 13069972

Gene Structure 3452 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g20970.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCTGCTCCAGTTCCACTGACTGTTGAGACCCAACTCATTCAGTCTTTGTTTGCAATTGTACTCAAGGGTCATTGGAGCCACCTCCTGAATCCCAAGCTTGGGTCTTGTCTCACCTCATCCGCCATCCACCAGGTACTCCTCCAACTCTCACTCTATGGCTACACCCCTTCACTTTCCTTGTCTTTCTTCAAATGGGCAGAGTCACTACCCAATTACAAGCACTCCTTGCAGTGCTCTTGGACCATGGTTCACATTCTCACCAAACACAGGCACTTCAAAACTGCGCATCAATTTCTTGAGAAGATTGCCTTTAGGGATTTCTTGTCATCCCCGTCGGTTTTGAATGCTTTGATTCCGACCCAAGATGACCCCGATGTGAATTCCCATGTTTTGAGCTGGCTTGTGATAACTTATGCTAATTCTAAGATGACCCAAGATGCTATTCAGGTTTTGGAGCATATGAGGGTACATGGGTTTAAGCCACATTTGCATGCTTGTACTGTGTTGTTGAATTCTTTGGTTAAAGATAGGTTGATTAGTATGGTTTGGAAAGTTTATAAGAAGATGATTAAGGGTGGGGTTGTTCCGAATATTCATACTTACAATGTGTTGATTCATGCTTGTTGCAAGTCTGGGGATATAGAAAAGGCGGAAGGATTGGTGAGTGAGATGGAGTTGAGGTGTGTGTTTCCTGATCTTTTCACCTTTAATACTTTGATATCGTTGTATTCAAAAACAGGTATGCATTATGAAGCTTTGTGTGTTCAAAGTAGAATGGAATTGGCAGGAGTTAGTCCTGACATGGTGACATACAATTCTCTTATGTATGGATTTTGTAGAGAAGGAAGGATGACAGAAGCTGTGAAACTTTTCCGTGATATCAAAGGTTGTGTTCCTAATCATATAACTTACACTACATTGATTGACGGGTATTGTAGAGTGAATGACCTCGAAGAAGCTTTAAGATTGTGCGAGGTAATGAAGTCTAAGGGGTTGTATCCTGGAGTTGTTACATATAATTCTATTCTCCGGAAATTATGTCAAGAAGGCAGGATGAGGGATGCGAATAAGCTTTTGAATGAGATGAGTGAAAAGAATGTTGAGCCTGACAATGTTACATGTAACACTTTGATTAATGCTTATTGCAAAATAGGAGATATGATGTCTGCAGTGAAAGTGAAGAACAGGATGTTGGCTTCTGGGTTGAAGCTGGATGCTTTTACCTATAAAGCACTCATTCATGGATTTTGTATGGTACCAGAAATGGACAGTGCTAAAGATCTTTTATTTAACATGCTTGATGCCGGGTTTTGCCCAAGTTATTGCACATATACATGGATTATAGATGCTTACTGCAACCGCGGCAATGAAGAAGCAGTTATAAAATTACCAGATGAGTTTGTTAGTAAAGGTATAATTGTTGATGTCTCTCTGTACAGGGCTTTAATAAGGAGGTTATGTAAACGAGAAAGGCTGGATTGTGCTGAAAAGGTTTACAGTCTTATGCAAGAGAAGGGTATATTAGCAGACAGTGTAGTATTTACTAGTCTAACATATGCTTACTTGAAAGCGGGAAAGTCAAGTGTAGTTTCCAGGATGTTAGATGAAATGTTCAAGAGGAGGTTGATGGTAACACGCAAGATCTACAGGTCTTTTAATGCATCGTATGCCAGTGAAAGTGACATCTTATGTCTCTTTTGGAATCATATGGTCGAGAGAGGCCTTATGTCAAAAACTGTTATGATGACTGAAATGCAGCAAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

590

Amino Acids

67.05

Weight (kDa)

8.7

Isoelectric Point (pI)

34.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	128 - 221	1e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	148 - 284	6e-12	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	151 - 210	6.1e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	164 - 211	6.7e-13	PPR repeat family
PPR_1	PF12854	194 - 226	1.4e-10	PPR repeat
PPR_2	PF13041	197 - 241	5.1e-13	PPR repeat family
PPR	PF01535	201 - 228	5.8e-08	PPR repeat
PPR_3	PF13812	221 - 276	3.4e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	232 - 281	2.7e-12	PPR repeat family
PPR_1	PF12854	264 - 294	3.6e-12	PPR repeat
PPR_2	PF13041	267 - 314	7.4e-17	PPR repeat family
PPR	PF01535	270 - 297	2.3e-07	PPR repeat
TPR_24	PF23276	287 - 394	3.5e-12	Fungal tetratrico peptide repeats
PPR_3	PF13812	295 - 345	3.7e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	296 - 329	7.2e-14	PPR repeat
PPR_2	PF13041	300 - 348	2.5e-15	PPR repeat family
PPR	PF01535	303 - 333	1.6e-08	PPR repeat
PPR_long	PF17177	317 - 414	1.8e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	331 - 364	7.6e-10	PPR repeat
PPR_2	PF13041	335 - 384	1.6e-18	PPR repeat family
PPR	PF01535	338 - 368	1.6e-06	PPR repeat
PPR_1	PF12854	366 - 398	2.2e-08	PPR repeat
PPR_2	PF13041	370 - 418	4.4e-15	PPR repeat family
PPR	PF01535	373 - 403	4.3e-06	PPR repeat
PPR_3	PF13812	394 - 455	3.4e-06	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0010203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38730
fragaria_vesca	FvH4_1g20970
malus_domestica	MD01G1028900.v1.1 MD15G1324700.v1.1
prunus_persica	Prupe.6G186200_v2.0.a1 Prupe.6G186200_v2.0.a1
pyrus_communis	pycom01g05700 pycom15g28650
rosa_chinensis	RchiOBHm_Chr2g0114451 RchiOBHm_Chr6g0269561
rosa_laevigata	RLG00000018102
rosa_multiflora	Rmu_sc0000431.1_g000034 Rmu_sc0003151.1_g000025
rosa_roxburghii	Rroxscaffold_2G00130160
rosa_rugosa	Rorug02G0190400 Rorug02G0190500
rosa_samantha	Rh2AG247700 Rh2BG257500 Rh2CG251200 Rh2DG255600
rosa_wichuraiana	Rw2G019250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	561, 1385
Acc16I	TGCGCA	1 cut(s)	288
Acc65I	GGTACC	1 cut(s)	1258
AccB1I	GGYRCC	1 cut(s)	1258
AccII	CGCG	1 cut(s)	1365
AccIII	TCCGGA	1 cut(s)	1032
AciI	CCGC	5 cut(s)	123, 653, 1363, 1365, 1574
AcsI	RAATTY	2 cut(s)	382, 514
AfaI	GTAC	6 cut(s)	63, 138, 471, 502, 1260, 1439
AfiI	CCNNNNNNNGG	3 cut(s)	101, 102, 270
AflIII	ACRYGT	1 cut(s)	1121
AhlI	ACTAGT	1 cut(s)	1547
AjnI	CCWGG	3 cut(s)	132, 1003, 1595
AjuI	GAANNNNNNNTTGG	4 cut(s)	429, 461, 1178, 1210
AluBI	AGCT	7 cut(s)	100, 399, 758, 863, 962, 1075, 1213
AluI	AGCT	7 cut(s)	100, 399, 758, 863, 962, 1075, 1213
Alw21I	GWGCWC	1 cut(s)	239
Alw26I	GTCTC	4 cut(s)	23, 116, 1435, 1700
AlwNI	CAGNNNCTG	1 cut(s)	863
Aor13HI	TCCGGA	1 cut(s)	1032
AoxI	GGCC	1 cut(s)	1723
ApeKI	GCWGC	2 cut(s)	5, 1759
ApoI	RAATTY	2 cut(s)	382, 514
AseI	ATTAAT	1 cut(s)	1137
Asp700I	GAANNNNTTC	1 cut(s)	872
Asp718I	GGTACC	1 cut(s)	1258
AspLEI	GCGC	1 cut(s)	289
AspS9I	GGNCC	1 cut(s)	243
AsuC2I	CCSGG	1 cut(s)	1309
AsuHPI	GGTGA	5 cut(s)	106, 253, 676, 697, 820
AvaII	GGWCC	1 cut(s)	243
BaeI	ACNNNNGTAYC	2 cut(s)	461, 494
BanI	GGYRCC	1 cut(s)	1258
Bbv12I	GWGCWC	1 cut(s)	239
BccI	CCATC	3 cut(s)	134, 667, 1624
BciT130I	CCWGG	3 cut(s)	134, 1005, 1597
BciVI	GTATCC	1 cut(s)	1011
BcnI	CCSGG	1 cut(s)	1309
BcoDI	GTCTC	4 cut(s)	23, 116, 1435, 1700
BcuI	ACTAGT	1 cut(s)	1547
BfaI	CTAG	1 cut(s)	1548
BfmI	CTRYAG	2 cut(s)	1170, 1648
BfuI	GTATCC	1 cut(s)	1011
BglII	AGATCT	2 cut(s)	1282, 1644
BisI	GCNGC	3 cut(s)	6, 1366, 1760
BlsI	GCNGC	3 cut(s)	7, 1367, 1761
Bme1390I	CCNGG	4 cut(s)	134, 1005, 1309, 1597
Bme18I	GGWCC	1 cut(s)	243
BmgT120I	GGNCC	1 cut(s)	243
BmiI	GGNNCC	2 cut(s)	80, 1260
BmrFI	CCNGG	4 cut(s)	134, 1005, 1309, 1597
BmsI	GCATC	7 cut(s)	298, 430, 1054, 1207, 1294, 1339, 1673
BpmI	CTGGAG	1 cut(s)	1026
BpuEI	CTTGAG	2 cut(s)	50, 320
BpuMI	CCSGG	1 cut(s)	1309
BsaI	GGTCTC	1 cut(s)	23
BsaJI	CCNNGG	2 cut(s)	246, 1363
BsaWI	WCCGGW	1 cut(s)	1032
BsaXI	ACNNNNNCTCC	6 cut(s)	209, 239, 668, 698, 1447, 1477
Bsc4I	CCNNNNNNNGG	3 cut(s)	101, 102, 270
Bse1I	ACTGG	2 cut(s)	11, 1674
Bse3DI	GCAATG	1 cut(s)	1375
BseAI	TCCGGA	1 cut(s)	1032
BseBI	CCWGG	3 cut(s)	134, 1005, 1597
BseDI	CCNNGG	2 cut(s)	246, 1363
BseGI	GGATG	9 cut(s)	119, 126, 329, 858, 1062, 1069, 1197, 1222, 1605
BseLI	CCNNNNNNNGG	3 cut(s)	101, 102, 270
BseMI	GCAATG	1 cut(s)	1375
BseNI	ACTGG	2 cut(s)	11, 1674
BseRI	GAGGAG	2 cut(s)	131, 1636
Bsh1236I	CGCG	1 cut(s)	1365
BshFI	GGCC	1 cut(s)	1725
BshNI	GGYRCC	1 cut(s)	1258
BsiHKAI	GWGCWC	1 cut(s)	239
BsiSI	CCGG	2 cut(s)	1033, 1308
BslI	CCNNNNNNNGG	3 cut(s)	101, 102, 270
BsmAI	GTCTC	4 cut(s)	23, 116, 1435, 1700
BsmI	GAATGC	1 cut(s)	352
BsnI	GGCC	1 cut(s)	1725
Bso31I	GGTCTC	1 cut(s)	23
Bsp1286I	GDGCHC	1 cut(s)	239
Bsp13I	TCCGGA	1 cut(s)	1032
Bsp1407I	TGTACA	1 cut(s)	1437
Bsp143I	GATC	3 cut(s)	697, 1282, 1644
Bsp19I	CCATGG	1 cut(s)	246
BspACI	CCGC	5 cut(s)	123, 653, 1363, 1365, 1574
BspANI	GGCC	1 cut(s)	1725
BspEI	TCCGGA	1 cut(s)	1032
BspFNI	CGCG	1 cut(s)	1365
BspLI	GGNNCC	2 cut(s)	80, 1260
BspMAI	CTGCAG	1 cut(s)	1174
BspT107I	GGYRCC	1 cut(s)	1258
BspTNI	GGTCTC	1 cut(s)	23
BsrDI	GCAATG	1 cut(s)	1375
BsrGI	TGTACA	1 cut(s)	1437
BsrI	ACTGG	2 cut(s)	11, 1674
BssECI	CCNNGG	2 cut(s)	246, 1363
BssMI	GATC	3 cut(s)	697, 1282, 1644
BssT1I	CCWWGG	1 cut(s)	246
Bst2UI	CCWGG	3 cut(s)	134, 1005, 1597
Bst4CI	ACNGT	6 cut(s)	25, 505, 1274, 1502, 1535, 1741
BstAPI	GCANNNNNTGC	2 cut(s)	229, 1670
BstAUI	TGTACA	1 cut(s)	1437
BstC8I	GCNNGC	2 cut(s)	401, 495
BstDEI	CTNAG	2 cut(s)	426, 990
BstDSI	CCRYGG	2 cut(s)	246, 1363
BstF5I	GGATG	9 cut(s)	119, 126, 329, 858, 1062, 1069, 1197, 1222, 1605
BstFNI	CGCG	1 cut(s)	1365
BstHHI	GCGC	1 cut(s)	289
BstKTI	GATC	3 cut(s)	700, 1285, 1647
BstMAI	GTCTC	4 cut(s)	23, 116, 1435, 1700
BstMBI	GATC	3 cut(s)	697, 1282, 1644
BstMWI	GCNNNNNNNGC	4 cut(s)	229, 490, 1365, 1670
BstNI	CCWGG	3 cut(s)	134, 1005, 1597
BstNSI	RCATGY	3 cut(s)	497, 1125, 1300
BstSCI	CCNGG	4 cut(s)	132, 1003, 1307, 1595
BstSFI	CTRYAG	2 cut(s)	1170, 1648
BstUI	CGCG	1 cut(s)	1365
BstX2I	RGATCY	2 cut(s)	1282, 1644
BstYI	RGATCY	2 cut(s)	1282, 1644
BsuI	GTATCC	1 cut(s)	1011
BsuRI	GGCC	1 cut(s)	1725
BtgI	CCRYGG	2 cut(s)	246, 1363
BtsCI	GGATG	9 cut(s)	119, 126, 329, 858, 1062, 1069, 1197, 1222, 1605
BtsI	GCAGTG	2 cut(s)	239, 1179
BtsIMutI	CAGTG	6 cut(s)	17, 239, 1179, 1279, 1540, 1681
Cac8I	GCNNGC	2 cut(s)	401, 495
CaiI	CAGNNNCTG	1 cut(s)	863
CfoI	GCGC	1 cut(s)	289
Cfr13I	GGNCC	1 cut(s)	243
Cfr42I	CCGCGG	1 cut(s)	1366
CsiI	ACCWGGT	1 cut(s)	132
Csp6I	GTAC	6 cut(s)	62, 137, 470, 501, 1259, 1438
CviQI	GTAC	6 cut(s)	62, 137, 470, 501, 1259, 1438
DdeI	CTNAG	2 cut(s)	426, 990
DpnI	GATC	3 cut(s)	699, 1284, 1646
DpnII	GATC	3 cut(s)	697, 1282, 1644
EciI	GGCGGA	2 cut(s)	112, 668
Eco130I	CCWWGG	1 cut(s)	246
Eco147I	AGGCCT	1 cut(s)	1725
Eco31I	GGTCTC	1 cut(s)	23
Eco32I	GATATC	2 cut(s)	723, 883
Eco47I	GGWCC	1 cut(s)	243
EcoRI	GAATTC	2 cut(s)	382, 514
EcoRII	CCWGG	3 cut(s)	132, 1003, 1595
EcoRV	GATATC	2 cut(s)	723, 883
EcoT14I	CCWWGG	1 cut(s)	246
EcoT22I	ATGCAT	2 cut(s)	750, 1666
ErhI	CCWWGG	1 cut(s)	246
FalI	AAGNNNNNCTT	4 cut(s)	212, 244, 296, 328
FauI	CCCGC	1 cut(s)	1567
FauNDI	CATATG	3 cut(s)	462, 1558, 1710
Fnu4HI	GCNGC	3 cut(s)	6, 1366, 1760
FokI	GGATG	9 cut(s)	106, 113, 316, 865, 1069, 1076, 1204, 1229, 1612
Fsp4HI	GCNGC	3 cut(s)	6, 1366, 1760
FspBI	CTAG	1 cut(s)	1548
FspI	TGCGCA	1 cut(s)	288
GlaI	GCGC	1 cut(s)	288
GluI	GCNGC	3 cut(s)	6, 1366, 1760
GsuI	CTGGAG	1 cut(s)	1026
HaeIII	GGCC	1 cut(s)	1725
HapII	CCGG	2 cut(s)	1033, 1308
HhaI	GCGC	1 cut(s)	289
Hin6I	GCGC	1 cut(s)	287
HinP1I	GCGC	1 cut(s)	287
HindIII	AAGCTT	4 cut(s)	98, 756, 960, 1073
HinfI	GANTC	5 cut(s)	91, 203, 355, 616, 1705
HpaII	CCGG	2 cut(s)	1033, 1308
HphI	GGTGA	5 cut(s)	106, 253, 676, 697, 820
Hpy166II	GTNNAC	3 cut(s)	253, 1466, 1498
Hpy188I	TCNGA	2 cut(s)	360, 591
Hpy188III	TCNNGA	8 cut(s)	88, 299, 695, 800, 1033, 1046, 1618, 1717
Hpy8I	GTNNAC	3 cut(s)	253, 1466, 1498
Hpy99I	CGWCG	1 cut(s)	340
HpyAV	CCTTC	6 cut(s)	180, 650, 839, 843, 1043, 1510
HpyCH4III	ACNGT	6 cut(s)	25, 505, 1274, 1502, 1535, 1741
HpyF10VI	GCNNNNNNNGC	4 cut(s)	229, 490, 1365, 1670
HpyF3I	CTNAG	2 cut(s)	426, 990
HspAI	GCGC	1 cut(s)	287
Kpn2I	TCCGGA	1 cut(s)	1032
KpnI	GGTACC	1 cut(s)	1262
KspI	CCGCGG	1 cut(s)	1366
Kzo9I	GATC	3 cut(s)	697, 1282, 1644
LmnI	GCTCC	3 cut(s)	13, 78, 457
LweI	GCATC	7 cut(s)	298, 430, 1054, 1207, 1294, 1339, 1673
MabI	ACCWGGT	1 cut(s)	132
MaeI	CTAG	1 cut(s)	1548
MaeIII	GTNAC	7 cut(s)	204, 808, 1012, 1117, 1124, 1633, 1682
MalI	GATC	3 cut(s)	699, 1284, 1646
MboI	GATC	3 cut(s)	697, 1282, 1644
MboII	GAAGA	6 cut(s)	181, 316, 577, 968, 1195, 1385
MfeI	CAATTG	1 cut(s)	57
MflI	RGATCY	2 cut(s)	1282, 1644
MhlI	GDGCHC	1 cut(s)	239
MlyI	GAGTC	1 cut(s)	212
MmeI	TCCRAC	2 cut(s)	169, 383
Mph1103I	ATGCAT	2 cut(s)	750, 1666
MroI	TCCGGA	1 cut(s)	1032
MroXI	GAANNNNTTC	1 cut(s)	872
MseI	TTAA	9 cut(s)	480, 525, 573, 711, 965, 1137, 1293, 1448, 1659
MslI	CAYNNNNRTG	2 cut(s)	492, 1336
MspA1I	CMGCKG	1 cut(s)	1365
MspI	CCGG	2 cut(s)	1033, 1308
MspR9I	CCNGG	4 cut(s)	134, 1005, 1309, 1597
MunI	CAATTG	1 cut(s)	57
Mva1269I	GAATGC	1 cut(s)	352
MvaI	CCWGG	3 cut(s)	134, 1005, 1597
MvnI	CGCG	1 cut(s)	1365
MwoI	GCNNNNNNNGC	4 cut(s)	229, 490, 1365, 1670
NciI	CCSGG	1 cut(s)	1309
NcoI	CCATGG	1 cut(s)	246
NdeI	CATATG	3 cut(s)	462, 1558, 1710
NdeII	GATC	3 cut(s)	697, 1282, 1644
NlaIV	GGNNCC	2 cut(s)	80, 1260
NmuCI	GTSAC	3 cut(s)	204, 808, 1682
NsbI	TGCGCA	1 cut(s)	288
NsiI	ATGCAT	2 cut(s)	750, 1666
NspI	RCATGY	3 cut(s)	497, 1125, 1300
PaeI	GCATGC	1 cut(s)	497
PceI	AGGCCT	1 cut(s)	1725
PciI	ACATGT	1 cut(s)	1121
PctI	GAATGC	1 cut(s)	352
PdmI	GAANNNNTTC	1 cut(s)	872
PfeI	GAWTC	4 cut(s)	91, 355, 616, 1705
PfoI	TCCNGGA	2 cut(s)	1003, 1595
PkrI	GCNGC	3 cut(s)	7, 1367, 1761
PleI	GAGTC	1 cut(s)	211
PpsI	GAGTC	1 cut(s)	211
PscI	ACATGT	1 cut(s)	1121
PshBI	ATTAAT	1 cut(s)	1137
PsiI	TTATAA	2 cut(s)	561, 1385
Psp6I	CCWGG	3 cut(s)	132, 1003, 1595
PspGI	CCWGG	3 cut(s)	132, 1003, 1595
PspN4I	GGNNCC	2 cut(s)	80, 1260
PspPI	GGNCC	1 cut(s)	243
PstI	CTGCAG	1 cut(s)	1174
PstNI	CAGNNNCTG	1 cut(s)	863
PsuI	RGATCY	2 cut(s)	1282, 1644
RsaI	GTAC	6 cut(s)	63, 138, 471, 502, 1260, 1439
RsaNI	GTAC	6 cut(s)	62, 137, 470, 501, 1259, 1438
RseI	CAYNNNNRTG	2 cut(s)	492, 1336
SacII	CCGCGG	1 cut(s)	1366
SaqAI	TTAA	9 cut(s)	480, 525, 573, 711, 965, 1137, 1293, 1448, 1659
SatI	GCNGC	3 cut(s)	6, 1366, 1760
Sau3AI	GATC	3 cut(s)	697, 1282, 1644
Sau96I	GGNCC	1 cut(s)	243
SchI	GAGTC	1 cut(s)	212
ScrFI	CCNGG	4 cut(s)	134, 1005, 1309, 1597
SduI	GDGCHC	1 cut(s)	239
SexAI	ACCWGGT	1 cut(s)	132
SfaNI	GCATC	7 cut(s)	298, 430, 1054, 1207, 1294, 1339, 1673
SfcI	CTRYAG	2 cut(s)	1170, 1648
Sfr303I	CCGCGG	1 cut(s)	1366
SgrBI	CCGCGG	1 cut(s)	1366
SinI	GGWCC	1 cut(s)	243
SmiMI	CAYNNNNRTG	2 cut(s)	492, 1336
SmlI	CTYRAG	2 cut(s)	65, 299
SmoI	CTYRAG	2 cut(s)	65, 299
SpeI	ACTAGT	1 cut(s)	1547
SphI	GCATGC	1 cut(s)	497
SseBI	AGGCCT	1 cut(s)	1725
SsiI	CCGC	5 cut(s)	123, 653, 1363, 1365, 1574
SspI	AATATT	1 cut(s)	595
SspMI	CTAG	1 cut(s)	1548
StuI	AGGCCT	1 cut(s)	1725
StyD4I	CCNGG	4 cut(s)	132, 1003, 1307, 1595
StyI	CCWWGG	1 cut(s)	246
TaaI	ACNGT	6 cut(s)	25, 505, 1274, 1502, 1535, 1741
TaqI	TCGA	2 cut(s)	954, 1716
TatI	WGTACW	3 cut(s)	61, 500, 1437
TauI	GCSGC	1 cut(s)	1368
TfiI	GAWTC	4 cut(s)	91, 355, 616, 1705
Tru1I	TTAA	9 cut(s)	480, 525, 573, 711, 965, 1137, 1293, 1448, 1659
Tru9I	TTAA	9 cut(s)	480, 525, 573, 711, 965, 1137, 1293, 1448, 1659
TscAI	CASTG	6 cut(s)	24, 239, 1179, 1279, 1540, 1681
TseFI	GTSAC	3 cut(s)	204, 808, 1682
TseI	GCWGC	2 cut(s)	5, 1759
Tsp45I	GTSAC	3 cut(s)	204, 808, 1682
TspDTI	ATGAA	7 cut(s)	587, 608, 768, 998, 1232, 1386, 1623
TspGWI	ACGGA	1 cut(s)	866
TspRI	CASTG	6 cut(s)	24, 239, 1179, 1279, 1540, 1681
VpaK11BI	GGWCC	1 cut(s)	243
VspI	ATTAAT	1 cut(s)	1137
XapI	RAATTY	2 cut(s)	382, 514
XceI	RCATGY	3 cut(s)	497, 1125, 1300
XmnI	GAANNNNTTC	1 cut(s)	872
XspI	CTAG	1 cut(s)	1548
Zsp2I	ATGCAT	2 cut(s)	750, 1666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.