FvH4_2g01650

Translocase of chloroplast

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
1480191 .. 1484960
4770 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g01650.t1

Sequence Viewer

Length: 3642 bp
ATGGAAAATGGTGATGGGATTGTAGGTGGGTCTCACTCGAGTGAGGTTTTTGAGGAGAGGGTTCTAGAGGATTCTAATGGCGTCAGGGATGATGTGGAGGAAGAAGTGTTTGAGGAGGCGGTAGAGACCGGGGCTGGGGCTGTCGGTGACAGTCCTCGTGCCGAGGATTTTGAAGAGGCTATCGAGGTTTTGGAGGAGGCAGGGAAAAGCAAGGAGGAGGAGGGGGCTGTGGGGAATGGTGGGGAGCAAGTAGAAAAAGTGGTGGGTGGGGATAGTGTTGATGTGGACGAGACTGTGAAGGAATCAGAGACCAGTGAATTGAAGGGAGTAGTGGCAGAGGTAGAGTTGGTGGGTACCTTAGAAGATGCGGAAAAAGATGTATCCGAGGCTGGTGCTGATGGACAAGTAGAAGTTTCGACAGTTGGGAATGAGGATGACTACATGAAGTCTGAGATACACGATTCTAAATCTAATGGGTTGTTGGATGTAGCAAACAAGGTTTCAGGGATCGGTGCGGGTGGAGAAATACCAATTTTGACTGATGTGGACGAGGTTGGTGTAAATCCTGTTGAGGTTGCTGAGAATGACAAGTCTGAGAAGGAAGAGCTGGATAACTCAGTTTTGGAGGTAGTGCCTACAGATGAAAAATTGGAGAGTGACGGTGCTAATCCTGATTCTCCTAGAGTCACTGAATTTAATGTGGAAATTTTGAAGGAAGCTGGAAATGGTCAGGAAGTAAAGGGGAATACCTCGAACACAGATTATCAATATGAGAAGACTGCTGGTGCTACTATGAAGCTTGAAGATGATAAGGATGTGGAAATGCAAGAGAGAAATATGGATTCTGAGCATACAGAATGTGAGAGTACTGACTCAAAAGATGCTATGTTTATCACTGAAGCAATGCAAGTGGATAATAAAATTGAAGAACTGAGAGGCAGTTTGACTTGTACAGATGCAGAAGATCAAGACTTAAAGGAAGTGAAAAGTGTTTCATCTGGGCTAGATTTGGAGCATGATGTGGAAATATCTGAACTTAAAGGCTTTTCTTCAGAACAACAGCTGTCAGGGGTAGAAAGTCCTGTGGCATCTGAAATGGCCGCTTCAGCTGTTTGTGGAAGTCCTGCAACTGAGGACGGAGAGAAGATTCAGGTTGGCGGCTCTGATTTGAGATCGGAGAATATCAAAGATGATGAACCTCGGCAAGGTGAGGTTGCTCATGTAGTTTGCAACAATGCTGCTGTGCCTGAGGAAGCTGAAAAGAGAGAAAACAATCATGTGGAGAAGGGTAGCAACAGAATGAATAGAGTGCAGGAGGTCCAGCATGCACCAGCTCATGGTTCCTCTAGAAATTCTACAAATCCCACTCCCCTTCCCGCTCGTCCAGCTGGCCTTGGGCGCGCTGCCCCGCTTTTGGAACCTGCACCTAGGGTGGTACAGCAGCCTCGGGTAAATGGTACAGTATCTCATGTGCAAAACCAGCAAATTGAGGATCCCATTAATGGAGAGGCGGAGGAGTCAGATGAGACTCGTGAAAAGCTTCAGATGATCAGAGTGAAATTTTTGCGGCTGGCGCATAGGCTTGGGCAGACTCCACATAATGTTGTTGTGGCTCAGGTTTTGTACAGACTGGGGTTAGCTGAGCAGCTACATGGAAGAAGTGGGGGTCGTGTTGGTGCCTTTAGCTTTGACCGTGCAAGCGCTATGGCGGAGCAGCTAGAGGCATCTGGGAATGAACCCCTTGATTTCTCTTGTACAATTATGGTTCTTGGAAAGTCGGGAGTTGGTAAAAGTGCCACCATAAATTCTATATTTGATGAAGTGAAGTTTAATACTGATGCATTTCAGATGGGGACAAAGAAGGTTCAGGATGTTGTGGGTACTGTGCAAGGGATTAAGGTAAGGGTCATTGACACACCTGGGCTTCTACCTTCCTGGTCGGACCAGCGTCAGAATGAGAAGATACTGCTTGCTGCTAAGCGATTTATCAAGAAAACTCCTCCAGATATTGTGTTGTATCTTGATAGGTTGGACATGCAGAGCAGGGATTTAAGTGACATGCCACTCTTGCGCACAATCACAGAGATCTTTGGGGCGACTATATGGTTCAATGCAATTGTGGTTCTGACTCATGCTGCATCAGCTCCGCCTGAGGGCCCAAATGGAGCTGCTTCTAGTTATGACATGTTTGTCACTCAACGATCTCATGTTGTCCAGCAAGCCATTCGTCAGGCCGCTGGGGATATGCGCCTTATGAATCCCGTTTCCTTAGTAGAGAACCACTCTGCTTGCAGGACCAATCGAGCTGGCCAGAGAGTCTTGCCAAATGGTCAGGTTTGGAAGCCTCATTTGTTATTGCTCTCTTTTGCATCCAAGATTCTTGCTGAAGCTAATGCACTATTGAAGTTGCAAGACAGTGCTCCTGGAAGACCTTTTGCACCACGATCTAGGGCACCTCCATTACCTTTCCTTCTTTCCTCACTTCTTCAGGCAAAACCGCAGTTGAAGCTGCCTGAGGATCAATTTGGTGATGATGATGATGATGATGGTGTAGATGATGATCTGGATGAGTCTACAGATTCTGAAGATGACTCAGAGTTTGATGAATTACCACCATTCAAACGTTTGACTAAGGCCCAGGTGGAGAAACTCTCAAAAGCTCAGAAAAAGGCATATTTTGATGAGTTGGAGTATAGAGAAAAGCTTTTCATGAAGAAACAGTTGAAGGAGGAGAAAAAGCGACGAAAGTTGATGAAAAAAATGGCAGCTGCAGCAAAGGATCTACCAAGTGATTATGGTGAAACTGTAGAGGAAGAGAGTGCAAGTGCAGCATCTGTACCCGTTCCCATGCCAGATTTACCCTTGCCTGCCTCCTTTGATTCTGATAATCCCACTCACCGTTATCGATATCTAGATTCTTCCAACCAGTGGCTTGTAAGGCCTGTTTTAGAAACTCATGGTTGGGATCATGATATTGGTTATGAGGGCATAAACGCAGAAAGATTGTTTGTCTTAAATGGCAAGATACCCTTATCATTTTCTGGCCAGGTCACAAAAGATAAGAAAGATGCCAATGTCCAAATGGAACTAGCTAGTTCAGTAAAGCATGGGGAAGGGAAAGCAAGTTCAGTAGGACTTGAAATGCAGACTGTTGGAAAGGACTTGGCGTATACTCTACGAGGTGACACAAGGTTCAGTAATTATAGGACGAATAAAGCTAGTGCTGGTGTTTCAGTCACCCTCTTGGGTGATGCTCTATCGGCTGGGTTGAAAATTGAAGACAAATTTATTCCTCATAAACGGTTTCGGTTGGTTATGACGGGCGGTGCAATGACTGCTCGTGGGGACATTGCTTATGGTGGTAGTTTGGAGGCTCAGTTAAGAGACAAAGATCATCCACTAGGTAATGCGCTATCAACTTTTGGGCTTACTGTGATGGATTGGCATGGAGATCTTGCTATTGGAGGTAATGTACAGACTCAGATTCCCGTTGGGCGACATACAAATCTTATAGCTCGTGCCAATATAAATAATAGGGGAGCCGGACAAATGAGCATCCGCGTAAATAGTTCAGAACAGCTTCAAATAGCTTTGATTGGTCTCATTCCTCTGCTTAGAAAGTTGTTCACTTACCCTGAATAG

Protein Analysis

1214

Amino Acids

132.07

Weight (kDa)

4.73

Isoelectric Point (pI)

38.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AIG1 PF04548 585 - 743 6.4e-25 AIG1 family
MMR_HSR1 PF01926 587 - 674 1.2e-09 50S ribosome-binding GTPase
TOC159_MAD PF11886 946 - 1210 1e-121 Translocase of chloroplast 159/132, membrane anchor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2189
Acc16I TGCGCA 1 cut(s) 2072
Acc36I ACCTGC 1 cut(s) 1429
Acc65I GGTACC 1 cut(s) 353
AccB1I GGYRCC 3 cut(s) 353, 1676, 2452
AccB7I CCANNNNNTGG 2 cut(s) 1337, 2928
AccBSI CCGCTC 1 cut(s) 1379
AccI GTMKAC 2 cut(s) 2573, 3170
AccII CGCG 2 cut(s) 1401, 3561
AclI AACGTT 1 cut(s) 2623
AclWI GGATC 6 cut(s) 515, 1487, 1500, 2526, 2787, 2973
AcoI YGGCCR 3 cut(s) 1098, 2308, 3043
AcsI RAATTY 6 cut(s) 692, 705, 1351, 1559, 1804, 3284
AcuI CTGAAG 7 cut(s) 918, 1035, 1089, 1526, 2406, 2471, 2604
AcyI GRCGYC 1 cut(s) 81
AfeI AGCGCT 1 cut(s) 1702
AfiI CCNNNNNNNGG 7 cut(s) 135, 1205, 1337, 1414, 1502, 2153, 2928
AflIII ACRYGT 1 cut(s) 2184
AjnI CCWGG 5 cut(s) 1918, 1934, 2422, 2637, 3045
AleI CACNNNNGTG 1 cut(s) 39
AloI GAACNNNNNNTCC 2 cut(s) 3109, 3141
Alw21I GWGCWC 1 cut(s) 2422
Alw26I GTCTC 7 cut(s) 36, 119, 284, 302, 1520, 3378, 3605
AlwI GGATC 6 cut(s) 515, 1487, 1500, 2526, 2787, 2973
AlwNI CAGNNNCTG 2 cut(s) 2582, 2834
Ama87I CYCGRG 2 cut(s) 37, 1446
Aor51HI AGCGCT 1 cut(s) 1702
AoxI GGCC 8 cut(s) 1098, 1390, 2155, 2232, 2308, 2634, 2939, 3043
ApaI GGGCCC 1 cut(s) 2159
ApoI RAATTY 6 cut(s) 692, 705, 1351, 1559, 1804, 3284
ArsI GACNNNNNNTTYG 2 cut(s) 2582, 2614
AseI ATTAAT 1 cut(s) 1500
Asp700I GAANNNNTTC 2 cut(s) 1539, 3579
Asp718I GGTACC 1 cut(s) 353
AspA2I CCTAGG 1 cut(s) 1427
AspLEI GCGC 7 cut(s) 1401, 1403, 1576, 1703, 2073, 2250, 3412
AspS9I GGNCC 6 cut(s) 1318, 1942, 2155, 2156, 2295, 2635
AsuC2I CCSGG 1 cut(s) 130
AsuHPI GGTGA 9 cut(s) 23, 158, 1220, 2540, 2810, 2888, 3194, 3229, 3260
AvaI CYCGRG 2 cut(s) 37, 1446
AvaII GGWCC 3 cut(s) 1318, 1942, 2295
AvrII CCTAGG 1 cut(s) 1427
AxyI CCTNAGG 3 cut(s) 1248, 2151, 2514
BaeGI GKGCMC 2 cut(s) 2159, 2455
BalI TGGCCA 2 cut(s) 2310, 3045
BamHI GGATCC 1 cut(s) 1492
BanI GGYRCC 3 cut(s) 353, 1676, 2452
BanII GRGCYC 1 cut(s) 2159
BauI CACGAG 4 cut(s) 156, 1530, 3339, 3516
BbsI GAAGAC 3 cut(s) 782, 2434, 3285
Bbv12I GWGCWC 1 cut(s) 2422
BccI CCATC 5 cut(s) 8, 392, 1843, 2540, 3430
BcgI CGANNNNNNTGC 4 cut(s) 374, 408, 2207, 2241
BciT130I CCWGG 5 cut(s) 1920, 1936, 2424, 2639, 3047
BciVI GTATCC 1 cut(s) 391
BclI TGATCA 1 cut(s) 1548
BcnI CCSGG 1 cut(s) 130
BcoDI GTCTC 7 cut(s) 36, 119, 284, 302, 1520, 3378, 3605
BfmI CTRYAG 4 cut(s) 636, 2574, 2769, 2805
BfoI RGCGCY 1 cut(s) 1704
BfuAI ACCTGC 1 cut(s) 1429
BfuI GTATCC 1 cut(s) 391
BglII AGATCT 2 cut(s) 2085, 3451
BlnI CCTAGG 1 cut(s) 1427
BlpI GCTNAGC 2 cut(s) 1641, 1977
BmcAI AGTACT 1 cut(s) 868
Bme1390I CCNGG 6 cut(s) 130, 1920, 1936, 2424, 2639, 3047
Bme18I GGWCC 3 cut(s) 1318, 1942, 2295
BmeT110I CYCGRG 2 cut(s) 37, 1446
BmgT120I GGNCC 6 cut(s) 1318, 1942, 2155, 2156, 2295, 2635
BmiI GGNNCC 8 cut(s) 355, 1342, 1419, 1494, 1678, 2157, 2454, 3541
BmrFI CCNGG 6 cut(s) 130, 1920, 1936, 2424, 2639, 3047
BmrI ACTGGG 1 cut(s) 1640
BmuI ACTGGG 1 cut(s) 1640
BoxI GACNNNNGTC 1 cut(s) 1947
BpiI GAAGAC 3 cut(s) 782, 2434, 3285
BplI GAGNNNNNCTC 4 cut(s) 2267, 2299, 2636, 2668
BpmI CTGGAG 1 cut(s) 1986
Bpu10I CCTNAGC 1 cut(s) 1614
Bpu1102I GCTNAGC 2 cut(s) 1641, 1977
BpuMI CCSGG 1 cut(s) 130
Bsa29I ATCGAT 1 cut(s) 2905
BsaBI GATNNNNATC 1 cut(s) 2559
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 4 cut(s) 36, 119, 302, 3605
BsaJI CCNNGG 9 cut(s) 129, 162, 384, 1199, 1393, 1427, 1445, 1919, 2637
BsaXI ACNNNNNCTCC 4 cut(s) 3362, 3392, 3456, 3486
Bsc4I CCNNNNNNNGG 7 cut(s) 135, 1205, 1337, 1414, 1502, 2153, 2928
Bse1I ACTGG 3 cut(s) 312, 1635, 2926
Bse21I CCTNAGG 3 cut(s) 1248, 2151, 2514
Bse3DI GCAATG 3 cut(s) 909, 3336, 3348
Bse8I GATNNNNATC 1 cut(s) 2559
BseBI CCWGG 5 cut(s) 1920, 1936, 2424, 2639, 3047
BseCI ATCGAT 1 cut(s) 2905
BseDI CCNNGG 9 cut(s) 129, 162, 384, 1199, 1393, 1427, 1445, 1919, 2637
BseGI GGATG 9 cut(s) 94, 439, 490, 820, 1876, 2369, 2572, 3394, 3555
BseJI GATNNNNATC 1 cut(s) 2559
BseLI CCNNNNNNNGG 7 cut(s) 135, 1205, 1337, 1414, 1502, 2153, 2928
BseMI GCAATG 3 cut(s) 909, 3336, 3348
BseNI ACTGG 3 cut(s) 312, 1635, 2926
BsePI GCGCGC 1 cut(s) 1399
BseRI GAGGAG 8 cut(s) 68, 128, 209, 230, 233, 1529, 1989, 2744
BseSI GKGCMC 2 cut(s) 2159, 2455
BseYI CCCAGC 3 cut(s) 134, 2237, 3263
BsgI GTGCAG 3 cut(s) 1331, 1407, 2847
Bsh1236I CGCG 2 cut(s) 1401, 3561
BshFI GGCC 8 cut(s) 1100, 1392, 2157, 2234, 2310, 2636, 2941, 3045
BshNI GGYRCC 3 cut(s) 353, 1676, 2452
BshVI ATCGAT 1 cut(s) 2905
BsiHKAI GWGCWC 1 cut(s) 2422
BsiHKCI CYCGRG 2 cut(s) 37, 1446
BsiSI CCGG 2 cut(s) 129, 3543
BslFI GGGAC 2 cut(s) 1867, 3359
BslI CCNNNNNNNGG 7 cut(s) 135, 1205, 1337, 1414, 1502, 2153, 2928
BsmAI GTCTC 7 cut(s) 36, 119, 284, 302, 1520, 3378, 3605
BsmFI GGGAC 2 cut(s) 1867, 3359
BsnI GGCC 8 cut(s) 1100, 1392, 2157, 2234, 2310, 2636, 2941, 3045
Bso31I GGTCTC 4 cut(s) 36, 119, 302, 3605
BsoBI CYCGRG 2 cut(s) 37, 1446
Bsp120I GGGCCC 1 cut(s) 2155
Bsp1286I GDGCHC 3 cut(s) 2159, 2422, 2455
Bsp1407I TGTACA 4 cut(s) 950, 1623, 1754, 3472
Bsp1720I GCTNAGC 2 cut(s) 1641, 1977
BspANI GGCC 8 cut(s) 1100, 1392, 2157, 2234, 2310, 2636, 2941, 3045
BspDI ATCGAT 1 cut(s) 2905
BspFNI CGCG 2 cut(s) 1401, 3561
BspHI TCATGA 2 cut(s) 2709, 2968
BspLI GGNNCC 8 cut(s) 355, 1342, 1419, 1494, 1678, 2157, 2454, 3541
BspMAI CTGCAG 1 cut(s) 2773
BspMI ACCTGC 1 cut(s) 1429
BspPI GGATC 6 cut(s) 515, 1487, 1500, 2526, 2787, 2973
BspQI GCTCTTC 1 cut(s) 597
BspT107I GGYRCC 3 cut(s) 353, 1676, 2452
BspTNI GGTCTC 4 cut(s) 36, 119, 302, 3605
BsrBI CCGCTC 1 cut(s) 1379
BsrDI GCAATG 3 cut(s) 909, 3336, 3348
BsrGI TGTACA 4 cut(s) 950, 1623, 1754, 3472
BsrI ACTGG 3 cut(s) 312, 1635, 2926
BssECI CCNNGG 9 cut(s) 129, 162, 384, 1199, 1393, 1427, 1445, 1919, 2637
BssHII GCGCGC 1 cut(s) 1399
BssNAI GTATAC 1 cut(s) 3171
BssNI GRCGYC 1 cut(s) 81
BssSI CACGAG 4 cut(s) 156, 1530, 3339, 3516
BssT1I CCWWGG 2 cut(s) 1393, 1427
Bst1107I GTATAC 1 cut(s) 3171
Bst2BI CACGAG 4 cut(s) 156, 1530, 3339, 3516
Bst2UI CCWGG 5 cut(s) 1920, 1936, 2424, 2639, 3047
Bst6I CTCTTC 3 cut(s) 168, 597, 2808
BstACI GRCGYC 1 cut(s) 81
BstAPI GCANNNNNTGC 1 cut(s) 3335
BstAUI TGTACA 4 cut(s) 950, 1623, 1754, 3472
BstENI CCTNNNNNAGG 1 cut(s) 1203
BstF5I GGATG 9 cut(s) 94, 439, 490, 820, 1876, 2369, 2572, 3394, 3555
BstFNI CGCG 2 cut(s) 1401, 3561
BstH2I RGCGCY 1 cut(s) 1704
BstHHI GCGC 7 cut(s) 1401, 1403, 1576, 1703, 2073, 2250, 3412
BstMAI GTCTC 7 cut(s) 36, 119, 284, 302, 1520, 3378, 3605
BstNI CCWGG 5 cut(s) 1920, 1936, 2424, 2639, 3047
BstNSI RCATGY 4 cut(s) 1328, 2038, 2062, 2188
BstPAI GACNNNNGTC 1 cut(s) 1947
BstSCI CCNGG 6 cut(s) 128, 1918, 1934, 2422, 2637, 3045
BstSFI CTRYAG 4 cut(s) 636, 2574, 2769, 2805
BstSLI GKGCMC 2 cut(s) 2159, 2455
BstUI CGCG 2 cut(s) 1401, 3561
BstV2I GAAGAC 3 cut(s) 782, 2434, 3285
BstX2I RGATCY 4 cut(s) 1492, 2085, 2779, 3451
BstYI RGATCY 4 cut(s) 1492, 2085, 2779, 3451
BstZ17I GTATAC 1 cut(s) 3171
Bsu15I ATCGAT 1 cut(s) 2905
Bsu36I CCTNAGG 3 cut(s) 1248, 2151, 2514
BsuI GTATCC 1 cut(s) 391
BsuRI GGCC 8 cut(s) 1100, 1392, 2157, 2234, 2310, 2636, 2941, 3045
BsuTUI ATCGAT 1 cut(s) 2905
BtsCI GGATG 9 cut(s) 94, 439, 490, 820, 1876, 2369, 2572, 3394, 3555
BtsIMutI CAGTG 5 cut(s) 319, 687, 894, 2422, 2933
BveI ACCTGC 1 cut(s) 1429
CaiI CAGNNNCTG 2 cut(s) 2582, 2834
CciI TCATGA 2 cut(s) 2709, 2968
CfoI GCGC 7 cut(s) 1401, 1403, 1576, 1703, 2073, 2250, 3412
Cfr13I GGNCC 6 cut(s) 1318, 1942, 2155, 2156, 2295, 2635
ClaI ATCGAT 1 cut(s) 2905
CseI GACGC 2 cut(s) 70, 1937
CspCI CAANNNNNGTGG 4 cut(s) 891, 926, 2270, 2305
DrdI GACNNNNNNGTC 1 cut(s) 2189
DseDI GACNNNNNNGTC 1 cut(s) 2189
EaeI YGGCCR 3 cut(s) 1098, 2308, 3043
Eam1104I CTCTTC 3 cut(s) 168, 597, 2808
EarI CTCTTC 3 cut(s) 168, 597, 2808
EciI GGCGGA 3 cut(s) 1526, 1724, 2136
Eco130I CCWWGG 2 cut(s) 1393, 1427
Eco147I AGGCCT 1 cut(s) 2941
Eco24I GRGCYC 1 cut(s) 2159
Eco31I GGTCTC 4 cut(s) 36, 119, 302, 3605
Eco32I GATATC 1 cut(s) 2909
Eco47I GGWCC 3 cut(s) 1318, 1942, 2295
Eco47III AGCGCT 1 cut(s) 1702
Eco57I CTGAAG 7 cut(s) 918, 1035, 1089, 1526, 2406, 2471, 2604
Eco81I CCTNAGG 3 cut(s) 1248, 2151, 2514
Eco88I CYCGRG 2 cut(s) 37, 1446
EcoNI CCTNNNNNAGG 1 cut(s) 1203
EcoO109I RGGNCCY 1 cut(s) 2155
EcoRII CCWGG 5 cut(s) 1918, 1934, 2422, 2637, 3045
EcoRV GATATC 1 cut(s) 2909
EcoT14I CCWWGG 2 cut(s) 1393, 1427
EcoT22I ATGCAT 1 cut(s) 1843
EcoT38I GRGCYC 1 cut(s) 2159
ErhI CCWWGG 2 cut(s) 1393, 1427
FalI AAGNNNNNCTT 2 cut(s) 3014, 3046
FaqI GGGAC 2 cut(s) 1867, 3359
FauI CCCGC 3 cut(s) 508, 1384, 1416
FbaI TGATCA 1 cut(s) 1548
FblI GTMKAC 2 cut(s) 2573, 3170
FokI GGATG 9 cut(s) 101, 446, 497, 827, 1883, 2356, 2579, 3381, 3542
FriOI GRGCYC 1 cut(s) 2159
FspI TGCGCA 1 cut(s) 2072
GlaI GCGC 7 cut(s) 1400, 1402, 1575, 1702, 2072, 2249, 3411
GsaI CCCAGC 3 cut(s) 138, 2241, 3267
GsuI CTGGAG 1 cut(s) 1986
HaeII RGCGCY 1 cut(s) 1704
HaeIII GGCC 8 cut(s) 1100, 1392, 2157, 2234, 2310, 2636, 2941, 3045
HapII CCGG 2 cut(s) 129, 3543
HgaI GACGC 2 cut(s) 70, 1937
HhaI GCGC 7 cut(s) 1401, 1403, 1576, 1703, 2073, 2250, 3412
Hin1I GRCGYC 1 cut(s) 81
Hin6I GCGC 7 cut(s) 1399, 1401, 1574, 1701, 2071, 2248, 3410
HinP1I GCGC 7 cut(s) 1399, 1401, 1574, 1701, 2071, 2248, 3410
HindIII AAGCTT 3 cut(s) 797, 1538, 2702
HpaII CCGG 2 cut(s) 129, 3543
HphI GGTGA 9 cut(s) 23, 158, 1220, 2540, 2810, 2888, 3194, 3229, 3260
Hpy166II GTNNAC 5 cut(s) 286, 547, 2574, 3171, 3627
Hpy8I GTNNAC 5 cut(s) 286, 547, 2574, 3171, 3627
Hpy99I CGWCG 1 cut(s) 2745
HpyCH4IV ACGT 1 cut(s) 2623
HpySE526I ACGT 1 cut(s) 2623
Hsp92I GRCGYC 1 cut(s) 81
HspAI GCGC 7 cut(s) 1399, 1401, 1574, 1701, 2071, 2248, 3410
KpnI GGTACC 1 cut(s) 357
Ksp22I TGATCA 1 cut(s) 1548
LguI GCTCTTC 1 cut(s) 597
LmnI GCTCC 7 cut(s) 244, 1012, 1711, 2149, 2165, 2425, 3539
MaeII ACGT 1 cut(s) 2623
MaeIII GTNAC 8 cut(s) 146, 656, 685, 2054, 2191, 3049, 3182, 3235
MbiI CCGCTC 1 cut(s) 1379
MfeI CAATTG 1 cut(s) 2115
MflI RGATCY 4 cut(s) 1492, 2085, 2779, 3451
MhlI GDGCHC 3 cut(s) 2159, 2422, 2455
MlsI TGGCCA 2 cut(s) 2310, 3045
MluNI TGGCCA 2 cut(s) 2310, 3045
MmeI TCCRAC 6 cut(s) 462, 1920, 2010, 2667, 2946, 3133
Mox20I TGGCCA 2 cut(s) 2310, 3045
Mph1103I ATGCAT 1 cut(s) 1843
MroXI GAANNNNTTC 2 cut(s) 1539, 3579
MscI TGGCCA 2 cut(s) 2310, 3045
MseI TTAA 9 cut(s) 696, 974, 1038, 1500, 1830, 1896, 2051, 3014, 3380
MslI CAYNNNNRTG 1 cut(s) 39
Msp20I TGGCCA 2 cut(s) 2310, 3045
MspA1I CMGCKG 5 cut(s) 1063, 1109, 1388, 2237, 2768
MspI CCGG 2 cut(s) 129, 3543
MspR9I CCNGG 6 cut(s) 130, 1920, 1936, 2424, 2639, 3047
MunI CAATTG 1 cut(s) 2115
MvaI CCWGG 5 cut(s) 1920, 1936, 2424, 2639, 3047
MvnI CGCG 2 cut(s) 1401, 3561
NciI CCSGG 1 cut(s) 130
NlaIV GGNNCC 8 cut(s) 355, 1342, 1419, 1494, 1678, 2157, 2454, 3541
NmeAIII GCCGAG 2 cut(s) 187, 1180
NmuCI GTSAC 8 cut(s) 146, 656, 685, 2054, 2191, 3049, 3182, 3235
NsbI TGCGCA 1 cut(s) 2072
NsiI ATGCAT 1 cut(s) 1843
NspI RCATGY 4 cut(s) 1328, 2038, 2062, 2188
OliI CACNNNNGTG 1 cut(s) 39
PaeI GCATGC 1 cut(s) 1328
PaeR7I CTCGAG 1 cut(s) 37
PagI TCATGA 2 cut(s) 2709, 2968
PauI GCGCGC 1 cut(s) 1399
PceI AGGCCT 1 cut(s) 2941
PciI ACATGT 1 cut(s) 2184
PciSI GCTCTTC 1 cut(s) 597
PdmI GAANNNNTTC 2 cut(s) 1539, 3579
PflMI CCANNNNNTGG 2 cut(s) 1337, 2928
PfoI TCCNGGA 1 cut(s) 2422
PscI ACATGT 1 cut(s) 2184
PshAI GACNNNNGTC 1 cut(s) 1947
PshBI ATTAAT 1 cut(s) 1500
Psp1406I AACGTT 1 cut(s) 2623
Psp6I CCWGG 5 cut(s) 1918, 1934, 2422, 2637, 3045
PspFI CCCAGC 3 cut(s) 134, 2237, 3263
PspGI CCWGG 5 cut(s) 1918, 1934, 2422, 2637, 3045
PspN4I GGNNCC 8 cut(s) 355, 1342, 1419, 1494, 1678, 2157, 2454, 3541
PspOMI GGGCCC 1 cut(s) 2155
PspPI GGNCC 6 cut(s) 1318, 1942, 2155, 2156, 2295, 2635
PspXI VCTCGAGB 1 cut(s) 37
PstI CTGCAG 1 cut(s) 2773
PstNI CAGNNNCTG 2 cut(s) 2582, 2834
PsuI RGATCY 4 cut(s) 1492, 2085, 2779, 3451
PteI GCGCGC 1 cut(s) 1399
PvuII CAGCTG 4 cut(s) 1063, 1109, 1388, 2768
RseI CAYNNNNRTG 1 cut(s) 39
SapI GCTCTTC 1 cut(s) 597
SaqAI TTAA 9 cut(s) 696, 974, 1038, 1500, 1830, 1896, 2051, 3014, 3380
Sau96I GGNCC 6 cut(s) 1318, 1942, 2155, 2156, 2295, 2635
ScaI AGTACT 1 cut(s) 868
ScrFI CCNGG 6 cut(s) 130, 1920, 1936, 2424, 2639, 3047
SduI GDGCHC 3 cut(s) 2159, 2422, 2455
SfcI CTRYAG 4 cut(s) 636, 2574, 2769, 2805
Sfr274I CTCGAG 1 cut(s) 37
SinI GGWCC 3 cut(s) 1318, 1942, 2295
SlaI CTCGAG 1 cut(s) 37
SmiMI CAYNNNNRTG 1 cut(s) 39
SmlI CTYRAG 1 cut(s) 37
SmoI CTYRAG 1 cut(s) 37
SphI GCATGC 1 cut(s) 1328
SseBI AGGCCT 1 cut(s) 2941
StuI AGGCCT 1 cut(s) 2941
StyD4I CCNGG 6 cut(s) 128, 1918, 1934, 2422, 2637, 3045
StyI CCWWGG 2 cut(s) 1393, 1427
TaiI ACGT 1 cut(s) 2626
TaqI TCGA 6 cut(s) 38, 183, 416, 752, 2302, 2905
TatI WGTACW 5 cut(s) 866, 950, 1623, 1754, 3472
TauI GCSGC 4 cut(s) 1103, 1161, 1570, 2237
Tru1I TTAA 9 cut(s) 696, 974, 1038, 1500, 1830, 1896, 2051, 3014, 3380
Tru9I TTAA 9 cut(s) 696, 974, 1038, 1500, 1830, 1896, 2051, 3014, 3380
TscAI CASTG 5 cut(s) 319, 694, 901, 2422, 2933
TseFI GTSAC 8 cut(s) 146, 656, 685, 2054, 2191, 3049, 3182, 3235
Tsp45I GTSAC 8 cut(s) 146, 656, 685, 2054, 2191, 3049, 3182, 3235
TspGWI ACGGA 1 cut(s) 1152
TspRI CASTG 5 cut(s) 319, 694, 901, 2422, 2933
Van91I CCANNNNNTGG 2 cut(s) 1337, 2928
VpaK11BI GGWCC 3 cut(s) 1318, 1942, 2295
VspI ATTAAT 1 cut(s) 1500
XagI CCTNNNNNAGG 1 cut(s) 1203
XapI RAATTY 6 cut(s) 692, 705, 1351, 1559, 1804, 3284
XbaI TCTAGA 3 cut(s) 64, 1346, 2911
XceI RCATGY 4 cut(s) 1328, 2038, 2062, 2188
XcmI CCANNNNNNNNNTGG 1 cut(s) 3079
XhoI CTCGAG 1 cut(s) 37
XmaJI CCTAGG 1 cut(s) 1427
XmiI GTMKAC 2 cut(s) 2573, 3170
XmnI GAANNNNTTC 2 cut(s) 1539, 3579
ZrmI AGTACT 1 cut(s) 868
Zsp2I ATGCAT 1 cut(s) 1843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.