Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007786

Physical Location & Seq

Genomic Coordinates Forward (+)

3252885 .. 3256571

Gene Structure 3687 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G002030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3687 bp

ATGGAAAATGGTGATGGGATTTTAGGTGGGTCTCAGACGGTGGGTGAGAATAAGGCTGAGGTTGTTGAGGAGAGGGTTGTAGAGGATTCTAATGGAGTCAAGGATGATGTGGAGGAAGAGGTTTTTGAGGAGGCGATAGAGACCGGGACTGTTGGCGACAGTCCTCGTGCGGAGGATTTTGAAGAGGCGATTGAGGTTCTGGATGAGGCTGAGAAGAGCAAGGAGGAGGAGGAGGCTGTGGAGAACGGTGGGGAGGAAGTAGAAAAATCGGTGGGTGGGGATAGTGTTGATGGGTTTGTGGGGACTAGTGTTGATGTGGAAGAGACTAGTGCGTCGAAGGGATTGGCAGATGAAGAGATGGTGGGTAGCCTAGAAGATGCGGTAAAAGATGTCTCGGAGGTTGGTGCTGATGGACAAGTAACAGTTTGGACAGGTGGGGATGAGGCTGACCATGTGAAGTGTGAGAATCACGATTCTAAATCAAATGGATTGACGAATGACGGGTTGTCGGATGCAGCAAATGAGGTTTCAGGGATTGGTGCTGGTGGAGAAATACCAATTTTGACTGATGTGGACGAGGTTGATGGGAAGCCCGTTGAGGTTGCTGAGAATGAGAAGTCTGAGAAGGACGACCAGGATAACTTAGTTTTGGAAGTAGTGGCCACAGATGAAAAATTGGAGAATGAAGGTGCTAATCTTGATTCTGCTCCTGCAACTGAATTTAATACTGAAAATTTGAAGGAAGCTGGAAATGGTGAGGAAATAAAGGACAGTATCTTGAGTACAGAGAATCTGGATGATAAGACTGTGGATGTGGTAGATACTTCTGTTGGTGTTACTTTGAAGCTTGAAGATGATAAGGGTGTGGAATTGCAAGAGAGAAATATGGATCCAGAGCATACAGAATGTGAGAGTACTGAATCAAATAATGCTATATTTGTCACTGAAGCAAGGCAAGTGGATAATAAAGTTGAAGAACTGAGAGCTACTATGACTTGTACGGATGCAGGAGATCAAGATTCAACGGAAGTGAAAAGTGTTTCTTCTGGGCTTGGTTTGGAGCATGATGTGGAAACATCTGAACTTAGAGGCATTTCATCTGAACAACAGTTGTCAGGGGTAGAAAGTCCTGTAGCATCTGAAATGGCAGGCTCAGCTGTTTCTAAAAGTTCTGCACCTGAGGACACAGAGAAGATTCAGGTTGGTAGCACTGTTTCGAGATCAGAGAATATCAAAGATGATGAACCTCAGCCAGCTGATGAGGTTGCTCATGTAGTTTGCAACAATGGTGCTGTGCCTGAGGAGCCTGAAAAGAAAGAAAACAATCATGTAGAGAAGAGTAGCAACAGAATGAATAGAGTGCAGGAGGTCCAGCATGCACCAGCTCATGGTACCTCTGGAAATTCTACAAATCCAACTCCCCTTCCCGCTCGTCCAGCTGGCCTTGGGCGTGCTGCCCCCCTTTTGGAACATGCACCTAGGGCGGTACAGCAGCCTCGGGTAAATGGTACCGTAACTCATGTGCAAAACCAGCAAATTGAGGATCCCGTTAATGGAGAGGCAGAGGAGTCGGATGAGACTCGTGAAAAGCTTCAGATGATCAGAGTAAAATTTTTGCGGCTTTCGCATAGGCTTGGGCAGACTCCACATAATGTTGTTGTGGCCCAGGTCTTGTACAGACTGGGGTTAGCTGAGCAGCTGCATGGGAGAAGTGGGGGTCGTGTTGGTGCCTTTAGTTTCGACCGTGCGAGTGCTATGGCGGAGCAGCTAGAGGCATCTGGGAATGAACCCCTTGATTTCTCTTGTACAATTATGGTTCTTGGAAAGTCAGGAGTTGGTAAAAGTGCCACCATCAATTCTATATTTGATGAAGTGAAGTTCAATACTGATGCTTTTCAGATGGGGACAAAGAAGGTTCAGGATGTCGTGGGTACTGTGCAGGGGATTAAGGTAAGAGTCATCGACACACCTGGGCTTCTACCTTCCTGGTCGGACCAGCGTCAGAATGAGAAAATTCTGCTCGCTGCTAAGCGCTTTATCAAGAAAACACCTCCAGATATTGTTTTGTATCTTGATAGGTTGGACATGCAGAGCAGGGATTTCAGTGACATGCCACTCTTGCGCACAATCACAGAGATTTTTGGGGCGACTATATGGTTCAATGCAATTGTGGTTCTGACTCATGCTGCATCAGCTCCGCCCGAGGGCCCAAATGGCGCTGCTTCTAGTTATGACATGTTCGTCACTCAACGATCTCATGTTGTCCAGCAAGCCATTCGTCAGGCGGCTGGGGATATGCGCCTTATGAATCCTGTTTCCTTAGTAGAGAACCACTCTGCTTGCAGGACCAATCGGGCTGGCCAGAGAGTCTTGCCAAATGGTCAGGTTTGGAAGCCTCATTTGTTATTGCTCTCTTTTGCATCCAAGATCCTTGCTGAAGCTAATGCACTATTGAAGTTGCAAGACAGTCCTCCTGGAAGACCTTTTGCACCTCGATCTAGGCCACCTCCATTACCTTTCCTTCTTTCCTCCCTCCTTCAGTCAAAACCGCAGTTGAAGCTGCCTGAGGATCAATTTGGTGATGATGATGATGGCGTAGATGATGATCTGGATGAGTCTTCAGATTCTGAAGATGAATCAGAATTTGATGAATTACCACCATTCAAACGTTTGACTAAGGCCCAGGTGGAGAAACTCTCTAAAGCTCAGAAAAAGGCATATTTTGATGAGTTGGAGTATAGAGAAAAGCTTTTTATGAAGAAACAGTTGAAGGACGAGAAAAAGCGACGAAAGTTGATGAAAAAAATGGCAGCTGCAGCAAAGGATCTGCCAAGTGATTATGGTGAAACTGTAGAGGAAGAAAGTGCAAGTGCAGCATCTGTACCCGTTCCCATGCCAGATTTGCCCTTGCCTGCTTCCTTTGATTCTGATAATCCCACTCATCGTTATCGATATCTAGATTCTTCCAACCAGTGGCTTGTAAGACCTGTTCTAGAAACTCATGGTTGGGATCATGACGTTGGTTATGAGGGCATAAATGCAGAAAGATTGTTTGTCTTAAATGGCAAAATACCCTTATCATTTTCTGGCCAGGTCACCAAAGATAAGAAGGATGCCAATGTCCAAATGGAACTAGCTAGTTCAGTAAAGCATGGGGAAGGGAAGGCAAGTTCGGTAGGACTTGAAATGCAGACTGTTGGAAAGGACTTGGCTTATACTCTACGAGGCGACACTAGGTTCAGTAATTTTAGGACGAATAAAGCAAGTGCTGGTGTCTCGGTCACCCTCTTGGGTGATGCTCTATCAGCTGGGTTGAAAATTGAAGACAAATTTATTCCTCATAAACGGTTCCGGTTGGTTATGACGGGTGGTGCAATGACTGCTCGTGGGGACATTGCTTATGGTGGTAGTTTGGAGGCTCAGTTAAGAGACAGAGATCATCCGCTGGGTCGTTCACTATCAACTTTTGGGCTCTCTGTGATGGATTGGCATGGAGATCTTGCTATTGGAGGTAATATACAGACTCAGATTCCAGTTGGTCGACATACAAACCTTATAGGTCGTGCCAATTTAAATAATAGGGGAGCAGGACAACTGAGCATCCGCTTGAATAGTTCAGAACAGCTTCAAATAGCTTTGATTGGTCTCATTCCGCTGCTTAGAAAGTTGTTCACTTACCCTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0019867 GO:0019899 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051117 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0060089 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

1228

Amino Acids

133.39

Weight (kDa)

4.69

Isoelectric Point (pI)

38.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AIG1	PF04548	602 - 760	5.7e-25	AIG1 family
MMR_HSR1	PF01926	604 - 691	1.4e-09	50S ribosome-binding GTPase
TOC159_MAD	PF11886	961 - 1225	1.2e-122	Translocase of chloroplast 159/132, membrane anchor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16640 AT2G16640 AT2G16640 AT3G16620
fragaria_vesca	FvH4_2g01650 FvH4_2g01650
malus_domestica	MD05G1117800.v1.1 MD10G1120800.v1.1
prunus_persica	Prupe.8G162300_v2.0.a1 Prupe.8G162300_v2.0.a1
pyrus_communis	pycom05g11180 pycom10g10400
rosa_chinensis	RchiOBHm_Chr6g0244541
rosa_laevigata	RLG00000015350
rosa_multiflora	Rmu_co8516985.1_g000001 Rmu_sc0003679.1_g000009 Rmu_sc0017888.1_g000001
rosa_roxburghii	Rroxscaffold_7G00215770
rosa_rugosa	Rorug05G0509200
rosa_samantha	Rh6AG024900 Rh6BG019800 Rh6CG017300 Rh6DG018300
rosa_wichuraiana	Rw6G002030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	331, 2240
Acc16I	TGCGCA	1 cut(s)	2123
Acc65I	GGTACC	2 cut(s)	1391, 1508
AccB1I	GGYRCC	3 cut(s)	1391, 1508, 1727
AccB7I	CCANNNNNTGG	2 cut(s)	1388, 2973
AccBSI	CCGCTC	1 cut(s)	1430
AccI	GTMKAC	1 cut(s)	3541
AclI	AACGTT	1 cut(s)	2668
AclWI	GGATC	8 cut(s)	884, 897, 1538, 1551, 2422, 2577, 2832, 3018
AcoI	YGGCCR	3 cut(s)	660, 2359, 3088
AcsI	RAATTY	7 cut(s)	719, 733, 1402, 1610, 2013, 2642, 3329
AcuI	CTGAAG	6 cut(s)	966, 1577, 2457, 2522, 2604, 2649
AfeI	AGCGCT	1 cut(s)	2033
AfiI	CCNNNNNNNGG	5 cut(s)	1388, 1465, 1553, 2204, 2973
AflIII	ACRYGT	1 cut(s)	2235
AhdI	GACNNNNNGTC	1 cut(s)	505
AhlI	ACTAGT	2 cut(s)	305, 326
AjnI	CCWGG	7 cut(s)	633, 1665, 1969, 1985, 2473, 2682, 3090
AloI	GAACNNNNNNTCC	2 cut(s)	3154, 3186
Alw26I	GTCTC	8 cut(s)	36, 134, 317, 397, 1571, 3280, 3423, 3650
AlwI	GGATC	8 cut(s)	884, 897, 1538, 1551, 2422, 2577, 2832, 3018
AlwNI	CAGNNNCTG	2 cut(s)	2627, 2879
Ama87I	CYCGRG	2 cut(s)	1497, 2201
Aor51HI	AGCGCT	1 cut(s)	2033
AoxI	GGCC	8 cut(s)	660, 1441, 1662, 2206, 2359, 2501, 2679, 3088
ApaI	GGGCCC	1 cut(s)	2210
ApoI	RAATTY	7 cut(s)	719, 733, 1402, 1610, 2013, 2642, 3329
Asp700I	GAANNNNTTC	2 cut(s)	1590, 3624
Asp718I	GGTACC	2 cut(s)	1391, 1508
AspA2I	CCTAGG	1 cut(s)	1478
AspLEI	GCGC	4 cut(s)	2034, 2124, 2219, 2301
AspS9I	GGNCC	7 cut(s)	1369, 1663, 1993, 2206, 2207, 2346, 2680
AsuC2I	CCSGG	1 cut(s)	145
AsuHPI	GGTGA	8 cut(s)	23, 56, 767, 2591, 2855, 3088, 3274, 3305
AvaI	CYCGRG	2 cut(s)	1497, 2201
AvaII	GGWCC	3 cut(s)	1369, 1993, 2346
AvrII	CCTAGG	1 cut(s)	1478
AxyI	CCTNAGG	3 cut(s)	1179, 1299, 2565
BaeGI	GKGCMC	1 cut(s)	2210
BaeI	ACNNNNGTAYC	2 cut(s)	813, 846
BalI	TGGCCA	3 cut(s)	662, 2361, 3090
BamHI	GGATCC	2 cut(s)	889, 1543
BanI	GGYRCC	3 cut(s)	1391, 1508, 1727
BanII	GRGCYC	2 cut(s)	2210, 3474
BauI	CACGAG	3 cut(s)	165, 1581, 3384
BbsI	GAAGAC	3 cut(s)	2485, 2610, 3330
BbvCI	CCTCAGC	2 cut(s)	57, 1248
BccI	CCATC	9 cut(s)	8, 284, 352, 404, 578, 1859, 1894, 2585, 3475
BcgI	CGANNNNNNTGC	4 cut(s)	1551, 1585, 2258, 2292
BciT130I	CCWGG	7 cut(s)	635, 1667, 1971, 1987, 2475, 2684, 3092
BclI	TGATCA	1 cut(s)	1599
BcnI	CCSGG	1 cut(s)	145
BcoDI	GTCTC	8 cut(s)	36, 134, 317, 397, 1571, 3280, 3423, 3650
BcuI	ACTAGT	2 cut(s)	305, 326
BfmI	CTRYAG	3 cut(s)	1131, 2814, 2850
BfoI	RGCGCY	2 cut(s)	2035, 2220
BglI	GCCNNNNNGGC	1 cut(s)	2214
BglII	AGATCT	1 cut(s)	3496
BlnI	CCTAGG	1 cut(s)	1478
BlpI	GCTNAGC	3 cut(s)	1153, 1692, 2028
BmcAI	AGTACT	1 cut(s)	916
Bme1390I	CCNGG	8 cut(s)	145, 635, 1667, 1971, 1987, 2475, 2684, 3092
Bme18I	GGWCC	3 cut(s)	1369, 1993, 2346
BmeRI	GACNNNNNGTC	1 cut(s)	505
BmeT110I	CYCGRG	2 cut(s)	1497, 2201
BmgT120I	GGNCC	7 cut(s)	1369, 1663, 1993, 2206, 2207, 2346, 2680
BmiI	GGNNCC	8 cut(s)	891, 1305, 1393, 1510, 1545, 1729, 2208, 3350
BmrFI	CCNGG	8 cut(s)	145, 635, 1667, 1971, 1987, 2475, 2684, 3092
BmrI	ACTGGG	1 cut(s)	1691
BmuI	ACTGGG	1 cut(s)	1691
BoxI	GACNNNNGTC	1 cut(s)	1998
BpiI	GAAGAC	3 cut(s)	2485, 2610, 3330
BplI	GAGNNNNNCTC	4 cut(s)	2318, 2350, 2681, 2713
BpmI	CTGGAG	1 cut(s)	2037
Bpu10I	CCTNAGC	2 cut(s)	57, 1248
Bpu1102I	GCTNAGC	3 cut(s)	1153, 1692, 2028
BpuEI	CTTGAG	1 cut(s)	799
BpuMI	CCSGG	1 cut(s)	145
Bsa29I	ATCGAT	1 cut(s)	2950
BsaBI	GATNNNNATC	1 cut(s)	2604
BsaI	GGTCTC	3 cut(s)	36, 134, 3650
BsaJI	CCNNGG	7 cut(s)	1444, 1478, 1496, 1665, 1970, 2202, 2682
BsaWI	WCCGGW	1 cut(s)	3351
BsaXI	ACNNNNNCTCC	2 cut(s)	3407, 3437
Bsc4I	CCNNNNNNNGG	5 cut(s)	1388, 1465, 1553, 2204, 2973
Bse1I	ACTGG	3 cut(s)	1686, 2971, 3533
Bse21I	CCTNAGG	3 cut(s)	1179, 1299, 2565
Bse3DI	GCAATG	2 cut(s)	3381, 3393
Bse8I	GATNNNNATC	1 cut(s)	2604
BseBI	CCWGG	7 cut(s)	635, 1667, 1971, 1987, 2475, 2684, 3092
BseCI	ATCGAT	1 cut(s)	2950
BseDI	CCNNGG	7 cut(s)	1444, 1478, 1496, 1665, 1970, 2202, 2682
BseJI	GATNNNNATC	1 cut(s)	2604
BseLI	CCNNNNNNNGG	5 cut(s)	1388, 1465, 1553, 2204, 2973
BseMI	GCAATG	2 cut(s)	3381, 3393
BseNI	ACTGG	3 cut(s)	1686, 2971, 3533
BseRI	GAGGAG	7 cut(s)	83, 143, 239, 242, 245, 1316, 1580
BseSI	GKGCMC	1 cut(s)	2210
BseYI	CCCAGC	3 cut(s)	2288, 3308, 3445
BsgI	GTGCAG	4 cut(s)	1158, 1382, 1958, 2892
Bsh1285I	CGRYCG	1 cut(s)	1744
BshFI	GGCC	8 cut(s)	662, 1443, 1664, 2208, 2361, 2503, 2681, 3090
BshNI	GGYRCC	3 cut(s)	1391, 1508, 1727
BshVI	ATCGAT	1 cut(s)	2950
BsiEI	CGRYCG	1 cut(s)	1744
BsiHKCI	CYCGRG	2 cut(s)	1497, 2201
BsiSI	CCGG	2 cut(s)	144, 3352
BslFI	GGGAC	4 cut(s)	160, 316, 1918, 3404
BslI	CCNNNNNNNGG	5 cut(s)	1388, 1465, 1553, 2204, 2973
BsmAI	GTCTC	8 cut(s)	36, 134, 317, 397, 1571, 3280, 3423, 3650
BsmFI	GGGAC	4 cut(s)	160, 316, 1918, 3404
BsnI	GGCC	8 cut(s)	662, 1443, 1664, 2208, 2361, 2503, 2681, 3090
Bso31I	GGTCTC	3 cut(s)	36, 134, 3650
BsoBI	CYCGRG	2 cut(s)	1497, 2201
Bsp120I	GGGCCC	1 cut(s)	2206
Bsp1286I	GDGCHC	2 cut(s)	2210, 3474
Bsp1407I	TGTACA	2 cut(s)	1674, 1805
Bsp1720I	GCTNAGC	3 cut(s)	1153, 1692, 2028
BspANI	GGCC	8 cut(s)	662, 1443, 1664, 2208, 2361, 2503, 2681, 3090
BspDI	ATCGAT	1 cut(s)	2950
BspHI	TCATGA	1 cut(s)	3013
BspLI	GGNNCC	8 cut(s)	891, 1305, 1393, 1510, 1545, 1729, 2208, 3350
BspMAI	CTGCAG	1 cut(s)	2818
BspPI	GGATC	8 cut(s)	884, 897, 1538, 1551, 2422, 2577, 2832, 3018
BspQI	GCTCTTC	1 cut(s)	209
BspT107I	GGYRCC	3 cut(s)	1391, 1508, 1727
BspTNI	GGTCTC	3 cut(s)	36, 134, 3650
BsrBI	CCGCTC	1 cut(s)	1430
BsrDI	GCAATG	2 cut(s)	3381, 3393
BsrGI	TGTACA	2 cut(s)	1674, 1805
BsrI	ACTGG	3 cut(s)	1686, 2971, 3533
BssECI	CCNNGG	7 cut(s)	1444, 1478, 1496, 1665, 1970, 2202, 2682
BssSI	CACGAG	3 cut(s)	165, 1581, 3384
BssT1I	CCWWGG	2 cut(s)	1444, 1478
Bst2BI	CACGAG	3 cut(s)	165, 1581, 3384
Bst2UI	CCWGG	7 cut(s)	635, 1667, 1971, 1987, 2475, 2684, 3092
Bst6I	CTCTTC	6 cut(s)	111, 177, 209, 315, 348, 1331
BstAPI	GCANNNNNTGC	1 cut(s)	3380
BstAUI	TGTACA	2 cut(s)	1674, 1805
BstEII	GGTNACC	2 cut(s)	3094, 3280
BstH2I	RGCGCY	2 cut(s)	2035, 2220
BstHHI	GCGC	4 cut(s)	2034, 2124, 2219, 2301
BstMAI	GTCTC	8 cut(s)	36, 134, 317, 397, 1571, 3280, 3423, 3650
BstMCI	CGRYCG	1 cut(s)	1744
BstNI	CCWGG	7 cut(s)	635, 1667, 1971, 1987, 2475, 2684, 3092
BstNSI	RCATGY	5 cut(s)	1379, 1475, 2089, 2113, 2239
BstPAI	GACNNNNGTC	1 cut(s)	1998
BstPI	GGTNACC	2 cut(s)	3094, 3280
BstSCI	CCNGG	8 cut(s)	143, 633, 1665, 1969, 1985, 2473, 2682, 3090
BstSFI	CTRYAG	3 cut(s)	1131, 2814, 2850
BstSLI	GKGCMC	1 cut(s)	2210
BstV2I	GAAGAC	3 cut(s)	2485, 2610, 3330
BstX2I	RGATCY	5 cut(s)	889, 1543, 2427, 2824, 3496
BstYI	RGATCY	5 cut(s)	889, 1543, 2427, 2824, 3496
Bsu15I	ATCGAT	1 cut(s)	2950
Bsu36I	CCTNAGG	3 cut(s)	1179, 1299, 2565
BsuRI	GGCC	8 cut(s)	662, 1443, 1664, 2208, 2361, 2503, 2681, 3090
BsuTUI	ATCGAT	1 cut(s)	2950
BtsIMutI	CAGTG	4 cut(s)	942, 1209, 2110, 2978
CaiI	CAGNNNCTG	2 cut(s)	2627, 2879
CciI	TCATGA	1 cut(s)	3013
CfoI	GCGC	4 cut(s)	2034, 2124, 2219, 2301
Cfr13I	GGNCC	7 cut(s)	1369, 1663, 1993, 2206, 2207, 2346, 2680
ClaI	ATCGAT	1 cut(s)	2950
CseI	GACGC	2 cut(s)	321, 1988
CspCI	CAANNNNNGTGG	4 cut(s)	939, 974, 2321, 2356
DraI	TTTAAA	1 cut(s)	3573
DrdI	GACNNNNNNGTC	2 cut(s)	331, 2240
DriI	GACNNNNNGTC	1 cut(s)	505
DseDI	GACNNNNNNGTC	2 cut(s)	331, 2240
EaeI	YGGCCR	3 cut(s)	660, 2359, 3088
Eam1104I	CTCTTC	6 cut(s)	111, 177, 209, 315, 348, 1331
Eam1105I	GACNNNNNGTC	1 cut(s)	505
EarI	CTCTTC	6 cut(s)	111, 177, 209, 315, 348, 1331
EciI	GGCGGA	2 cut(s)	1775, 2187
Eco130I	CCWWGG	2 cut(s)	1444, 1478
Eco24I	GRGCYC	2 cut(s)	2210, 3474
Eco31I	GGTCTC	3 cut(s)	36, 134, 3650
Eco32I	GATATC	1 cut(s)	2954
Eco47I	GGWCC	3 cut(s)	1369, 1993, 2346
Eco47III	AGCGCT	1 cut(s)	2033
Eco57I	CTGAAG	6 cut(s)	966, 1577, 2457, 2522, 2604, 2649
Eco81I	CCTNAGG	3 cut(s)	1179, 1299, 2565
Eco88I	CYCGRG	2 cut(s)	1497, 2201
Eco91I	GGTNACC	2 cut(s)	3094, 3280
EcoO109I	RGGNCCY	1 cut(s)	2206
EcoO65I	GGTNACC	2 cut(s)	3094, 3280
EcoRII	CCWGG	7 cut(s)	633, 1665, 1969, 1985, 2473, 2682, 3090
EcoRV	GATATC	1 cut(s)	2954
EcoT14I	CCWWGG	2 cut(s)	1444, 1478
EcoT38I	GRGCYC	2 cut(s)	2210, 3474
ErhI	CCWWGG	2 cut(s)	1444, 1478
FalI	AAGNNNNNCTT	2 cut(s)	1027, 1059
FaqI	GGGAC	4 cut(s)	160, 316, 1918, 3404
FauI	CCCGC	1 cut(s)	1435
FbaI	TGATCA	1 cut(s)	1599
FblI	GTMKAC	1 cut(s)	3541
FriOI	GRGCYC	2 cut(s)	2210, 3474
FspI	TGCGCA	1 cut(s)	2123
GlaI	GCGC	4 cut(s)	2033, 2123, 2218, 2300
GsaI	CCCAGC	3 cut(s)	2292, 3312, 3449
GsuI	CTGGAG	1 cut(s)	2037
HaeII	RGCGCY	2 cut(s)	2035, 2220
HaeIII	GGCC	8 cut(s)	662, 1443, 1664, 2208, 2361, 2503, 2681, 3090
HapII	CCGG	2 cut(s)	144, 3352
HgaI	GACGC	2 cut(s)	321, 1988
HhaI	GCGC	4 cut(s)	2034, 2124, 2219, 2301
Hin6I	GCGC	4 cut(s)	2032, 2122, 2217, 2299
HinP1I	GCGC	4 cut(s)	2032, 2122, 2217, 2299
HincII	GTYRAC	1 cut(s)	3542
HindII	GTYRAC	1 cut(s)	3542
HindIII	AAGCTT	3 cut(s)	845, 1589, 2747
HpaII	CCGG	2 cut(s)	144, 3352
HphI	GGTGA	8 cut(s)	23, 56, 767, 2591, 2855, 3088, 3274, 3305
Hpy166II	GTNNAC	4 cut(s)	574, 3455, 3542, 3672
Hpy8I	GTNNAC	4 cut(s)	574, 3455, 3542, 3672
Hpy99I	CGWCG	2 cut(s)	337, 2790
HpyCH4IV	ACGT	2 cut(s)	2668, 3018
HpySE526I	ACGT	2 cut(s)	2668, 3018
HspAI	GCGC	4 cut(s)	2032, 2122, 2217, 2299
KpnI	GGTACC	2 cut(s)	1395, 1512
Ksp22I	TGATCA	1 cut(s)	1599
LguI	GCTCTTC	1 cut(s)	209
LmnI	GCTCC	6 cut(s)	712, 1060, 1303, 1762, 2200, 3584
MaeII	ACGT	2 cut(s)	2668, 3018
MaeIII	GTNAC	8 cut(s)	418, 835, 940, 1513, 2105, 2242, 3094, 3280
MbiI	CCGCTC	1 cut(s)	1430
MfeI	CAATTG	1 cut(s)	2166
MflI	RGATCY	5 cut(s)	889, 1543, 2427, 2824, 3496
MhlI	GDGCHC	2 cut(s)	2210, 3474
MlsI	TGGCCA	3 cut(s)	662, 2361, 3090
MluNI	TGGCCA	3 cut(s)	662, 2361, 3090
MlyI	GAGTC	9 cut(s)	105, 1573, 1577, 1636, 1965, 2173, 2376, 2624, 3517
MmeI	TCCRAC	8 cut(s)	489, 1439, 1551, 1971, 2061, 2712, 2991, 3178
Mox20I	TGGCCA	3 cut(s)	662, 2361, 3090
MroXI	GAANNNNTTC	2 cut(s)	1590, 3624
MscI	TGGCCA	3 cut(s)	662, 2361, 3090
MseI	TTAA	6 cut(s)	723, 1551, 1947, 3059, 3425, 3572
Msp20I	TGGCCA	3 cut(s)	662, 2361, 3090
MspA1I	CMGCKG	8 cut(s)	1157, 1256, 1439, 1699, 2813, 3308, 3445, 3655
MspI	CCGG	2 cut(s)	144, 3352
MspR9I	CCNGG	8 cut(s)	145, 635, 1667, 1971, 1987, 2475, 2684, 3092
MunI	CAATTG	1 cut(s)	2166
MvaI	CCWGG	7 cut(s)	635, 1667, 1971, 1987, 2475, 2684, 3092
NciI	CCSGG	1 cut(s)	145
NlaIV	GGNNCC	8 cut(s)	891, 1305, 1393, 1510, 1545, 1729, 2208, 3350
NmuCI	GTSAC	5 cut(s)	940, 2105, 2242, 3094, 3280
NsbI	TGCGCA	1 cut(s)	2123
NspI	RCATGY	5 cut(s)	1379, 1475, 2089, 2113, 2239
PaeI	GCATGC	1 cut(s)	1379
PagI	TCATGA	1 cut(s)	3013
PciI	ACATGT	1 cut(s)	2235
PciSI	GCTCTTC	1 cut(s)	209
PdmI	GAANNNNTTC	2 cut(s)	1590, 3624
PflMI	CCANNNNNTGG	2 cut(s)	1388, 2973
PfoI	TCCNGGA	1 cut(s)	2473
PleI	GAGTC	9 cut(s)	104, 1573, 1576, 1636, 1964, 2173, 2375, 2623, 3517
PpsI	GAGTC	9 cut(s)	104, 1573, 1576, 1636, 1964, 2173, 2375, 2623, 3517
PscI	ACATGT	1 cut(s)	2235
PshAI	GACNNNNGTC	1 cut(s)	1998
Psp1406I	AACGTT	1 cut(s)	2668
Psp6I	CCWGG	7 cut(s)	633, 1665, 1969, 1985, 2473, 2682, 3090
PspEI	GGTNACC	2 cut(s)	3094, 3280
PspFI	CCCAGC	3 cut(s)	2288, 3308, 3445
PspGI	CCWGG	7 cut(s)	633, 1665, 1969, 1985, 2473, 2682, 3090
PspN4I	GGNNCC	8 cut(s)	891, 1305, 1393, 1510, 1545, 1729, 2208, 3350
PspOMI	GGGCCC	1 cut(s)	2206
PspPI	GGNCC	7 cut(s)	1369, 1663, 1993, 2206, 2207, 2346, 2680
PsrI	GAACNNNNNNTAC	2 cut(s)	2973, 3005
PstI	CTGCAG	1 cut(s)	2818
PstNI	CAGNNNCTG	2 cut(s)	2627, 2879
PsuI	RGATCY	5 cut(s)	889, 1543, 2427, 2824, 3496
PvuII	CAGCTG	6 cut(s)	1157, 1256, 1439, 1699, 2813, 3308
SalI	GTCGAC	1 cut(s)	3540
SapI	GCTCTTC	1 cut(s)	209
SaqAI	TTAA	6 cut(s)	723, 1551, 1947, 3059, 3425, 3572
Sau96I	GGNCC	7 cut(s)	1369, 1663, 1993, 2206, 2207, 2346, 2680
ScaI	AGTACT	1 cut(s)	916
SchI	GAGTC	9 cut(s)	105, 1573, 1577, 1636, 1965, 2173, 2376, 2624, 3517
ScrFI	CCNGG	8 cut(s)	145, 635, 1667, 1971, 1987, 2475, 2684, 3092
SduI	GDGCHC	2 cut(s)	2210, 3474
SfcI	CTRYAG	3 cut(s)	1131, 2814, 2850
SinI	GGWCC	3 cut(s)	1369, 1993, 2346
SmiI	ATTTAAAT	1 cut(s)	3573
SmlI	CTYRAG	1 cut(s)	778
SmoI	CTYRAG	1 cut(s)	778
SpeI	ACTAGT	2 cut(s)	305, 326
SphI	GCATGC	1 cut(s)	1379
StyD4I	CCNGG	8 cut(s)	143, 633, 1665, 1969, 1985, 2473, 2682, 3090
StyI	CCWWGG	2 cut(s)	1444, 1478
SwaI	ATTTAAAT	1 cut(s)	3573
TaiI	ACGT	2 cut(s)	2671, 3021
TaqI	TCGA	7 cut(s)	335, 1217, 1740, 1962, 2494, 2950, 3541
TaqII	GACCGA	1 cut(s)	3268
TatI	WGTACW	4 cut(s)	782, 914, 1674, 1805
TauI	GCSGC	2 cut(s)	1621, 2288
Tru1I	TTAA	6 cut(s)	723, 1551, 1947, 3059, 3425, 3572
Tru9I	TTAA	6 cut(s)	723, 1551, 1947, 3059, 3425, 3572
TscAI	CASTG	4 cut(s)	949, 1216, 2110, 2978
TseFI	GTSAC	5 cut(s)	940, 2105, 2242, 3094, 3280
Tsp45I	GTSAC	5 cut(s)	940, 2105, 2242, 3094, 3280
TspGWI	ACGGA	2 cut(s)	1016, 1040
TspRI	CASTG	4 cut(s)	949, 1216, 2110, 2978
Van91I	CCANNNNNTGG	2 cut(s)	1388, 2973
VpaK11BI	GGWCC	3 cut(s)	1369, 1993, 2346
XapI	RAATTY	7 cut(s)	719, 733, 1402, 1610, 2013, 2642, 3329
XbaI	TCTAGA	2 cut(s)	2956, 2992
XceI	RCATGY	5 cut(s)	1379, 1475, 2089, 2113, 2239
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3124
XmaJI	CCTAGG	1 cut(s)	1478
XmiI	GTMKAC	1 cut(s)	3541
XmnI	GAANNNNTTC	2 cut(s)	1590, 3624
ZrmI	AGTACT	1 cut(s)	916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.