Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0005585

Physical Location & Seq

Genomic Coordinates Reverse (-)

3235955 .. 3241755

Gene Structure 5801 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g04110.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGAAGTTTATGAAACTTGGATCGAAGCCGGATTCCTTTCAGACTGATGGCAATAATGTTAGGTATGTGGCAGCTGATTTGGAAACGGATATCATCTTTAATGTTGGAGATTCAAAGTTTCATCTACACAAGTTTCCTCTTCTATCGAAGAGTGCCCGCTTACAGAAGTTAGCAAACACCAATGAGTCAAAACCTTTGGAAATTCACATTTCAGACATTCCTGGTGGCCCTGCTGCGTTTGAGATATGTGCCAAGTTCTGTTATGGCATGACTGTCACCCTGAATGCTTACAATGTTGTTGTGTCTCGATGTGCGGCTGAGTATTTGGGAATGCACGAGTCTATTGAGAAAGGAAATCTCATATACAAGATTGATGTTTTTCTTAACTCTAGCATTTTCCGTAGTTGGAAGGATTCGATCATTGTTCTCCAGACTACAAAGTCTCTTCTACCGGTATCTGAGGACCTGAAGTTGGTTAGCCAATGCATTGATTCGATAGCTACCAAGGCATGTGTTGATGTTTCAAAAGTTGACTGGTCCTATACCTATAACAGGAAGAAACTTGCAGAGGAAAATGGGAACGATCCAAATTGGAATGGTGTCAGAAACCGTCAAGTTCCAAAGGATTGGTGGGTGGAGGAATTATGTGAGCTTGAGATTGATTTATTTAAGCGTGTTCTTATGGGTATTAAAACCAAAGCAGTACTTTCTGGTGAAGTGATCGGGGAAGCCTTGAAAGCTTATGCTTACAGAAGGTTACCAGGTTTCAGCAAAGGTATGATCCAGGGTGGAGATATGGCAAAGCATCGATCAACAGTGGATGCAATTGTCTGGCTGTTGCCTGCAGAGAAAGGCAGCGTCTCTTGTAGTTTCTTGCTCAAATTGTTAAAAGCAGCTATATATGTGAATTCAGGAGAAACGACCAAGGATGAGATGGTAAAGAGAATAGGACAGCAACTGGAGGAGGCTTCAGTGAATGATCTTTTGATACGAGCAGCAGAAGGAGAAGCTACTATATATGATGTTAATGCAGTTAAAAGAATAGTAGAAGAGTTTCTAAGGAAAGATCAGACTGCTGAGATTCAATCATTAGAAGAAGGCCATGAGATTCAAGAGGAAAGAAGGCCAGGGATCTTGTCAGATGCTTCTAAGTTGATGGTGGCAAAACTGATAGATGGGTATCTTACTGAAATTTCAAAGGATGCCAACCTACCCTTGTCCAGGTTTGTTGATCTTGCAGAAATGGTGTCAGGTTTCTCTCGCCCTGGACATGATGGGCTTTACCGAGCCATTGACATGTTTCTCAAGGAGCACCCAGGGATTAGTAAGAGTGAGAGAAAGAGGATCTGCAAGCTGATGGACTGCAAAAAGCTATCAGTTGAAGCCTGCATGCACGCTGTGCAAAATGAGAGACTCCCATTGCGCGTAGTTGTGCAGGTACTCTTTTTTGAGCAAGTCAGAGCTGCTGCTTCATCAGGAACTAGCACTCCCGACTTACCTAAAGGCATGAAAGATTTAAACAGTGGTTCTCATGGGAGCTCAAGGTCTGCAACAACTAACACAGAGGAGGATTGGGATGCAGTTGCATCCGCTGAGGAGCTTAGGGCCCTGAAAGGAGAGCTAGCTTCCTTAAGATTGGCCAGTAGTGAGAGGAATGGAGATGGTAAAAGCAATGTTGACAAGGCCGCAGTTAGTAAAATGAGAGGGTTGCTCAATTCAAAGAAGGTCTTTGCCAAGCTATTTTCAAGCAAAGGGGGACAAGGCGAGAATAGTGGCTCAGATTCATCTGGGAGTCTTGGTTCTGCAAATCCTGAAGAGGCTGCTAAATCCACCCCTTCGAGAAATCGGAGGCATTCGGTTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009958 GO:0044464 GO:0050896 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

622

Amino Acids

68.48

Weight (kDa)

8.15

Isoelectric Point (pI)

37.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	29 - 117	5.4e-06	BTB/POZ domain
NPH3	PF03000	209 - 463	1.6e-89	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14820 AT2G14820
fragaria_vesca	FvH4_2g04110 FvH4_2g04110 FvH4_2g04110 FvH4_2g04110
malus_domestica	MD05G1098200.v1.1 MD10G1103900.v1.1
prunus_persica	Prupe.8G142300_v2.0.a1 Prupe.8G142300_v2.0.a1 Prupe.8G142300_v2.0.a1
pyrus_communis	pycom05g09610 pycom10g08930
rosa_chinensis	RchiOBHm_Chr6g0253481
rosa_laevigata	RLG00000015016
rosa_multiflora	Rmu_sc0030462.1_g000001 Rmu_ssc0000079.1_g000008
rosa_roxburghii	Rroxscaffold_7G00211860
rosa_rugosa	Rorug05G0544500 Rorug05G0544600 Rorug05G0544700 Rorug05G0544700
rosa_samantha	Rh3CG324600 Rh3DG323200 Rh6AG059600 Rh6BG053600 Rh6CG050700 Rh6DG047400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	439
Acc36I	ACCTGC	1 cut(s)	1426
AccII	CGCG	1 cut(s)	1425
AciI	CCGC	4 cut(s)	157, 314, 1590, 1686
AclWI	GGATC	5 cut(s)	28, 578, 775, 1139, 1352
AcoI	YGGCCR	1 cut(s)	1638
AcsI	RAATTY	3 cut(s)	201, 907, 1191
AcuI	CTGAAG	3 cut(s)	488, 954, 1833
AdeI	CACNNNGTG	1 cut(s)	1399
AfaI	GTAC	2 cut(s)	705, 1440
AfiI	CCNNNNNNNGG	3 cut(s)	472, 552, 1221
AflII	CTTAAG	1 cut(s)	1630
AflIII	ACRYGT	1 cut(s)	1296
AgeI	ACCGGT	1 cut(s)	451
AgsI	TTSAA	9 cut(s)	114, 525, 736, 1085, 1112, 1197, 1382, 1719, 1746
AjnI	CCWGG	7 cut(s)	220, 760, 783, 1126, 1220, 1264, 1315
AloI	GAACNNNNNNTCC	4 cut(s)	1471, 1503, 1783, 1815
Alw21I	GWGCWC	2 cut(s)	1314, 1541
Alw26I	GTCTC	4 cut(s)	309, 447, 865, 1405
AlwI	GGATC	5 cut(s)	28, 578, 775, 1139, 1352
AlwNI	CAGNNNCTG	1 cut(s)	958
AoxI	GGCC	6 cut(s)	226, 1099, 1124, 1605, 1638, 1683
ApaI	GGGCCC	1 cut(s)	1609
ApeKI	GCWGC	8 cut(s)	71, 233, 855, 893, 995, 1463, 1466, 1820
ApoI	RAATTY	3 cut(s)	201, 907, 1191
AsiGI	ACCGGT	1 cut(s)	451
Asp700I	GAANNNNTTC	1 cut(s)	1053
AspLEI	GCGC	1 cut(s)	1425
AspS9I	GGNCC	5 cut(s)	227, 463, 537, 1605, 1606
AsuHPI	GGTGA	2 cut(s)	268, 725
AsuNHI	GCTAGC	1 cut(s)	1621
AvaII	GGWCC	2 cut(s)	463, 537
BaeGI	GKGCMC	2 cut(s)	157, 1609
BalI	TGGCCA	1 cut(s)	1640
BanII	GRGCYC	2 cut(s)	1541, 1609
BauI	CACGAG	1 cut(s)	335
Bbv12I	GWGCWC	2 cut(s)	1314, 1541
BbvCI	CCTCAGC	1 cut(s)	1593
BbvI	GCAGC	8 cut(s)	83, 220, 867, 905, 1007, 1450, 1453, 1807
BccI	CCATC	7 cut(s)	41, 928, 1150, 1169, 1268, 1351, 1655
BciT130I	CCWGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
BcoDI	GTCTC	4 cut(s)	309, 447, 865, 1405
BfaI	CTAG	3 cut(s)	390, 1482, 1622
BfmI	CTRYAG	1 cut(s)	843
BfrI	CTTAAG	1 cut(s)	1630
BfuAI	ACCTGC	1 cut(s)	1426
BmcAI	AGTACT	1 cut(s)	705
Bme1390I	CCNGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
Bme18I	GGWCC	2 cut(s)	463, 537
BmgT120I	GGNCC	5 cut(s)	227, 463, 537, 1605, 1606
BmiI	GGNNCC	1 cut(s)	1607
BmrFI	CCNGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
BmsI	GCATC	6 cut(s)	811, 814, 1132, 1192, 1567, 1595
BmtI	GCTAGC	1 cut(s)	1625
BplI	GAGNNNNNCTC	2 cut(s)	1695, 1727
BpmI	CTGGAG	2 cut(s)	413, 980
Bpu10I	CCTNAGC	2 cut(s)	1593, 1601
BpuEI	CTTGAG	3 cut(s)	674, 1289, 1525
Bsa29I	ATCGAT	1 cut(s)	808
BsaBI	GATNNNNATC	1 cut(s)	1179
BsaJI	CCNNGG	7 cut(s)	504, 784, 924, 1127, 1264, 1315, 1316
BsaWI	WCCGGW	1 cut(s)	451
BsaXI	ACNNNNNCTCC	4 cut(s)	1471, 1501, 1783, 1813
Bsc4I	CCNNNNNNNGG	3 cut(s)	472, 552, 1221
Bse118I	RCCGGY	1 cut(s)	451
Bse1I	ACTGG	3 cut(s)	539, 963, 1641
Bse3DI	GCAATG	2 cut(s)	1418, 1678
Bse8I	GATNNNNATC	1 cut(s)	1179
BseBI	CCWGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
BseCI	ATCGAT	1 cut(s)	808
BseDI	CCNNGG	7 cut(s)	504, 784, 924, 1127, 1264, 1315, 1316
BseGI	GGATG	5 cut(s)	826, 934, 1207, 1582, 1586
BseJI	GATNNNNATC	1 cut(s)	1179
BseLI	CCNNNNNNNGG	3 cut(s)	472, 552, 1221
BseMI	GCAATG	2 cut(s)	1418, 1678
BseMII	CTCAG	5 cut(s)	309, 450, 1068, 1584, 1791
BseNI	ACTGG	3 cut(s)	539, 963, 1641
BseRI	GAGGAG	3 cut(s)	977, 1580, 1610
BseSI	GKGCMC	2 cut(s)	157, 1609
BseXI	GCAGC	8 cut(s)	83, 220, 867, 905, 1007, 1450, 1453, 1807
BsgI	GTGCAG	1 cut(s)	1454
Bsh1236I	CGCG	1 cut(s)	1425
BshFI	GGCC	6 cut(s)	228, 1101, 1126, 1607, 1640, 1685
BshTI	ACCGGT	1 cut(s)	451
BshVI	ATCGAT	1 cut(s)	808
BsiHKAI	GWGCWC	2 cut(s)	1314, 1541
BsiSI	CCGG	2 cut(s)	29, 452
BslFI	GGGAC	1 cut(s)	1770
BslI	CCNNNNNNNGG	3 cut(s)	472, 552, 1221
BsmAI	GTCTC	4 cut(s)	309, 447, 865, 1405
BsmBI	CGTCTC	1 cut(s)	865
BsmFI	GGGAC	1 cut(s)	1770
BsmI	GAATGC	3 cut(s)	289, 336, 1852
BsnI	GGCC	6 cut(s)	228, 1101, 1126, 1607, 1640, 1685
Bsp120I	GGGCCC	1 cut(s)	1605
Bsp1286I	GDGCHC	4 cut(s)	157, 1314, 1541, 1609
BspACI	CCGC	4 cut(s)	157, 314, 1590, 1686
BspANI	GGCC	6 cut(s)	228, 1101, 1126, 1607, 1640, 1685
BspCNI	CTCAG	5 cut(s)	310, 451, 1069, 1585, 1790
BspDI	ATCGAT	1 cut(s)	808
BspFNI	CGCG	1 cut(s)	1425
BspLI	GGNNCC	1 cut(s)	1607
BspMAI	CTGCAG	1 cut(s)	847
BspMI	ACCTGC	1 cut(s)	1426
BspOI	GCTAGC	1 cut(s)	1625
BspPI	GGATC	5 cut(s)	28, 578, 775, 1139, 1352
BspTI	CTTAAG	1 cut(s)	1630
BsrDI	GCAATG	2 cut(s)	1418, 1678
BsrFI	RCCGGY	1 cut(s)	451
BsrI	ACTGG	3 cut(s)	539, 963, 1641
BssAI	RCCGGY	1 cut(s)	451
BssECI	CCNNGG	7 cut(s)	504, 784, 924, 1127, 1264, 1315, 1316
BssSI	CACGAG	1 cut(s)	335
BssT1I	CCWWGG	2 cut(s)	504, 924
Bst2BI	CACGAG	1 cut(s)	335
Bst2UI	CCWGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
Bst4CI	ACNGT	4 cut(s)	274, 611, 817, 1523
Bst6I	CTCTTC	5 cut(s)	143, 144, 450, 1044, 1809
BstAFI	CTTAAG	1 cut(s)	1630
BstAPI	GCANNNNNTGC	1 cut(s)	1399
BstC8I	GCNNGC	7 cut(s)	157, 843, 1352, 1387, 1391, 1395, 1623
BstDEI	CTNAG	9 cut(s)	318, 459, 1058, 1077, 1149, 1593, 1601, 1777, 1863
BstEII	GGTNACC	1 cut(s)	756
BstENI	CCTNNNNNAGG	2 cut(s)	550, 1219
BstF5I	GGATG	5 cut(s)	826, 934, 1207, 1582, 1586
BstFNI	CGCG	1 cut(s)	1425
BstHHI	GCGC	1 cut(s)	1425
BstMAI	GTCTC	4 cut(s)	309, 447, 865, 1405
BstMWI	GCNNNNNNNGC	3 cut(s)	506, 737, 1399
BstNI	CCWGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
BstNSI	RCATGY	3 cut(s)	513, 1300, 1393
BstPI	GGTNACC	1 cut(s)	756
BstSCI	CCNGG	7 cut(s)	220, 760, 783, 1126, 1220, 1264, 1315
BstSFI	CTRYAG	1 cut(s)	843
BstSLI	GKGCMC	2 cut(s)	157, 1609
BstUI	CGCG	1 cut(s)	1425
BstV1I	GCAGC	8 cut(s)	83, 220, 867, 905, 1007, 1450, 1453, 1807
BstX2I	RGATCY	2 cut(s)	1131, 1344
BstXI	CCANNNNNNTGG	1 cut(s)	627
BstYI	RGATCY	2 cut(s)	1131, 1344
Bsu15I	ATCGAT	1 cut(s)	808
BsuRI	GGCC	6 cut(s)	228, 1101, 1126, 1607, 1640, 1685
BsuTUI	ATCGAT	1 cut(s)	808
BtsCI	GGATG	5 cut(s)	826, 934, 1207, 1582, 1586
BtsIMutI	CAGTG	3 cut(s)	822, 978, 1528
BveI	ACCTGC	1 cut(s)	1426
Cac8I	GCNNGC	7 cut(s)	157, 843, 1352, 1387, 1391, 1395, 1623
CaiI	CAGNNNCTG	1 cut(s)	958
CfoI	GCGC	1 cut(s)	1425
Cfr10I	RCCGGY	1 cut(s)	451
Cfr13I	GGNCC	5 cut(s)	227, 463, 537, 1605, 1606
ClaI	ATCGAT	1 cut(s)	808
CseI	GACGC	1 cut(s)	847
CsiI	ACCWGGT	1 cut(s)	760
Csp6I	GTAC	2 cut(s)	704, 1439
CspAI	ACCGGT	1 cut(s)	451
CviAII	CATG	8 cut(s)	268, 510, 1103, 1271, 1297, 1390, 1507, 1532
CviQI	GTAC	2 cut(s)	704, 1439
DdeI	CTNAG	9 cut(s)	318, 459, 1058, 1077, 1149, 1593, 1601, 1777, 1863
DraI	TTTAAA	1 cut(s)	1518
DraIII	CACNNNGTG	1 cut(s)	1399
DrdI	GACNNNNNNGTC	1 cut(s)	439
DseDI	GACNNNNNNGTC	1 cut(s)	439
EaeI	YGGCCR	1 cut(s)	1638
Eam1104I	CTCTTC	5 cut(s)	143, 144, 450, 1044, 1809
EarI	CTCTTC	5 cut(s)	143, 144, 450, 1044, 1809
Ecl136II	GAGCTC	1 cut(s)	1539
Eco130I	CCWWGG	2 cut(s)	504, 924
Eco24I	GRGCYC	2 cut(s)	1541, 1609
Eco32I	GATATC	1 cut(s)	91
Eco47I	GGWCC	2 cut(s)	463, 537
Eco53kI	GAGCTC	1 cut(s)	1539
Eco57I	CTGAAG	3 cut(s)	488, 954, 1833
Eco91I	GGTNACC	1 cut(s)	756
EcoICRI	GAGCTC	1 cut(s)	1539
EcoNI	CCTNNNNNAGG	2 cut(s)	550, 1219
EcoO109I	RGGNCCY	3 cut(s)	463, 1605, 1606
EcoO65I	GGTNACC	1 cut(s)	756
EcoRI	GAATTC	1 cut(s)	907
EcoRII	CCWGG	7 cut(s)	220, 760, 783, 1126, 1220, 1264, 1315
EcoRV	GATATC	1 cut(s)	91
EcoT14I	CCWWGG	2 cut(s)	504, 924
EcoT22I	ATGCAT	1 cut(s)	488
EcoT38I	GRGCYC	2 cut(s)	1541, 1609
ErhI	CCWWGG	2 cut(s)	504, 924
Esp3I	CGTCTC	1 cut(s)	865
FaeI	CATG	8 cut(s)	271, 513, 1106, 1274, 1300, 1393, 1510, 1535
FalI	AAGNNNNNCTT	4 cut(s)	690, 722, 1712, 1744
FaqI	GGGAC	1 cut(s)	1770
FatI	CATG	8 cut(s)	267, 509, 1102, 1270, 1296, 1389, 1506, 1531
FauI	CCCGC	1 cut(s)	164
FokI	GGATG	5 cut(s)	833, 941, 1214, 1573, 1589
FriOI	GRGCYC	2 cut(s)	1541, 1609
FspBI	CTAG	3 cut(s)	390, 1482, 1622
GlaI	GCGC	1 cut(s)	1424
GsuI	CTGGAG	2 cut(s)	413, 980
HaeIII	GGCC	6 cut(s)	228, 1101, 1126, 1607, 1640, 1685
HapII	CCGG	2 cut(s)	29, 452
HgaI	GACGC	1 cut(s)	847
HhaI	GCGC	1 cut(s)	1425
Hin1II	CATG	8 cut(s)	271, 513, 1106, 1274, 1300, 1393, 1510, 1535
Hin6I	GCGC	1 cut(s)	1423
HinP1I	GCGC	1 cut(s)	1423
HincII	GTYRAC	2 cut(s)	532, 1678
HindII	GTYRAC	2 cut(s)	532, 1678
HindIII	AAGCTT	1 cut(s)	738
HpaII	CCGG	2 cut(s)	29, 452
HphI	GGTGA	2 cut(s)	268, 725
Hpy166II	GTNNAC	2 cut(s)	532, 1678
Hpy188I	TCNGA	9 cut(s)	42, 214, 460, 605, 1071, 1141, 1460, 1780, 1848
Hpy188III	TCNNGA	8 cut(s)	306, 430, 912, 1112, 1476, 1490, 1811, 1839
Hpy8I	GTNNAC	2 cut(s)	532, 1678
HpyAV	CCTTC	7 cut(s)	403, 747, 995, 1091, 1116, 1717, 1845
HpyCH4III	ACNGT	4 cut(s)	274, 611, 817, 1523
HpyF10VI	GCNNNNNNNGC	3 cut(s)	506, 737, 1399
HpyF3I	CTNAG	9 cut(s)	318, 459, 1058, 1077, 1149, 1593, 1601, 1777, 1863
Hsp92II	CATG	8 cut(s)	271, 513, 1106, 1274, 1300, 1393, 1510, 1535
HspAI	GCGC	1 cut(s)	1423
LmnI	GCTCC	3 cut(s)	1309, 1536, 1597
Lsp1109I	GCAGC	8 cut(s)	83, 220, 867, 905, 1007, 1450, 1453, 1807
LweI	GCATC	6 cut(s)	811, 814, 1132, 1192, 1567, 1595
MabI	ACCWGGT	1 cut(s)	760
MaeI	CTAG	3 cut(s)	390, 1482, 1622
MaeIII	GTNAC	2 cut(s)	274, 756
MboII	GAAGA	7 cut(s)	131, 160, 437, 568, 1061, 1106, 1826
MfeI	CAATTG	1 cut(s)	825
MflI	RGATCY	2 cut(s)	1131, 1344
MhlI	GDGCHC	4 cut(s)	157, 1314, 1541, 1609
MlsI	TGGCCA	1 cut(s)	1640
MluCI	AATT	8 cut(s)	201, 589, 641, 825, 881, 907, 1191, 1714
MluNI	TGGCCA	1 cut(s)	1640
MlyI	GAGTC	4 cut(s)	194, 347, 1407, 1801
MmeI	TCCRAC	2 cut(s)	85, 386
Mox20I	TGGCCA	1 cut(s)	1640
Mph1103I	ATGCAT	1 cut(s)	488
MroXI	GAANNNNTTC	1 cut(s)	1053
MscI	TGGCCA	1 cut(s)	1640
MseI	TTAA	9 cut(s)	99, 384, 669, 690, 887, 1026, 1035, 1517, 1631
MslI	CAYNNNNRTG	1 cut(s)	1295
Msp20I	TGGCCA	1 cut(s)	1640
MspA1I	CMGCKG	2 cut(s)	74, 1592
MspCI	CTTAAG	1 cut(s)	1630
MspI	CCGG	2 cut(s)	29, 452
MspR9I	CCNGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
MunI	CAATTG	1 cut(s)	825
Mva1269I	GAATGC	3 cut(s)	289, 336, 1852
MvaI	CCWGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
MvnI	CGCG	1 cut(s)	1425
MwoI	GCNNNNNNNGC	3 cut(s)	506, 737, 1399
NheI	GCTAGC	1 cut(s)	1621
NlaIII	CATG	8 cut(s)	271, 513, 1106, 1274, 1300, 1393, 1510, 1535
NlaIV	GGNNCC	1 cut(s)	1607
NmuCI	GTSAC	1 cut(s)	274
NsiI	ATGCAT	1 cut(s)	488
NspI	RCATGY	3 cut(s)	513, 1300, 1393
PaeI	GCATGC	1 cut(s)	1393
PasI	CCCWGGG	1 cut(s)	1316
PciI	ACATGT	1 cut(s)	1296
PctI	GAATGC	3 cut(s)	289, 336, 1852
PdmI	GAANNNNTTC	1 cut(s)	1053
PfeI	GAWTC	7 cut(s)	32, 110, 413, 491, 1081, 1108, 1781
PinAI	ACCGGT	1 cut(s)	451
PleI	GAGTC	4 cut(s)	193, 346, 1407, 1800
PpsI	GAGTC	4 cut(s)	193, 346, 1407, 1800
PpuMI	RGGWCCY	1 cut(s)	463
PscI	ACATGT	1 cut(s)	1296
Psp124BI	GAGCTC	1 cut(s)	1541
Psp5II	RGGWCCY	1 cut(s)	463
Psp6I	CCWGG	7 cut(s)	220, 760, 783, 1126, 1220, 1264, 1315
PspEI	GGTNACC	1 cut(s)	756
PspGI	CCWGG	7 cut(s)	220, 760, 783, 1126, 1220, 1264, 1315
PspN4I	GGNNCC	1 cut(s)	1607
PspOMI	GGGCCC	1 cut(s)	1605
PspPI	GGNCC	5 cut(s)	227, 463, 537, 1605, 1606
PspPPI	RGGWCCY	1 cut(s)	463
PstI	CTGCAG	1 cut(s)	847
PstNI	CAGNNNCTG	1 cut(s)	958
PsuI	RGATCY	2 cut(s)	1131, 1344
PvuII	CAGCTG	1 cut(s)	74
RsaI	GTAC	2 cut(s)	705, 1440
RsaNI	GTAC	2 cut(s)	704, 1439
RseI	CAYNNNNRTG	1 cut(s)	1295
SacI	GAGCTC	1 cut(s)	1541
SaqAI	TTAA	9 cut(s)	99, 384, 669, 690, 887, 1026, 1035, 1517, 1631
Sau96I	GGNCC	5 cut(s)	227, 463, 537, 1605, 1606
ScaI	AGTACT	1 cut(s)	705
SchI	GAGTC	4 cut(s)	194, 347, 1407, 1801
ScrFI	CCNGG	7 cut(s)	222, 762, 785, 1128, 1222, 1266, 1317
SduI	GDGCHC	4 cut(s)	157, 1314, 1541, 1609
SexAI	ACCWGGT	1 cut(s)	760
SfaNI	GCATC	6 cut(s)	811, 814, 1132, 1192, 1567, 1595
SfcI	CTRYAG	1 cut(s)	843
SinI	GGWCC	2 cut(s)	463, 537
SmiMI	CAYNNNNRTG	1 cut(s)	1295
SmlI	CTYRAG	4 cut(s)	653, 1304, 1540, 1630
SmoI	CTYRAG	4 cut(s)	653, 1304, 1540, 1630
SphI	GCATGC	1 cut(s)	1393
Sse9I	AATT	8 cut(s)	201, 589, 641, 825, 881, 907, 1191, 1714
SsiI	CCGC	4 cut(s)	157, 314, 1590, 1686
SspMI	CTAG	3 cut(s)	390, 1482, 1622
SstI	GAGCTC	1 cut(s)	1541
StyD4I	CCNGG	7 cut(s)	220, 760, 783, 1126, 1220, 1264, 1315
StyI	CCWWGG	2 cut(s)	504, 924
TaaI	ACNGT	4 cut(s)	274, 611, 817, 1523
TaqI	TCGA	7 cut(s)	23, 146, 307, 416, 494, 808, 1838
TasI	AATT	8 cut(s)	201, 589, 641, 825, 881, 907, 1191, 1714
TatI	WGTACW	1 cut(s)	703
TauI	GCSGC	2 cut(s)	317, 1688
TfiI	GAWTC	7 cut(s)	32, 110, 413, 491, 1081, 1108, 1781
Tru1I	TTAA	9 cut(s)	99, 384, 669, 690, 887, 1026, 1035, 1517, 1631
Tru9I	TTAA	9 cut(s)	99, 384, 669, 690, 887, 1026, 1035, 1517, 1631
TscAI	CASTG	3 cut(s)	822, 978, 1528
TseFI	GTSAC	1 cut(s)	274
TseI	GCWGC	8 cut(s)	71, 233, 855, 893, 995, 1463, 1466, 1820
Tsp45I	GTSAC	1 cut(s)	274
TspDTI	ATGAA	6 cut(s)	17, 26, 110, 1461, 1523, 1773
TspGWI	ACGGA	2 cut(s)	101, 389
TspRI	CASTG	3 cut(s)	822, 978, 1528
Vha464I	CTTAAG	1 cut(s)	1630
VpaK11BI	GGWCC	2 cut(s)	463, 537
XagI	CCTNNNNNAGG	2 cut(s)	550, 1219
XapI	RAATTY	3 cut(s)	201, 907, 1191
XceI	RCATGY	3 cut(s)	513, 1300, 1393
XcmI	CCANNNNNNNNNTGG	2 cut(s)	627, 931
XmnI	GAANNNNTTC	1 cut(s)	1053
XspI	CTAG	3 cut(s)	390, 1482, 1622
ZrmI	AGTACT	1 cut(s)	705
Zsp2I	ATGCAT	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.