Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005585

Physical Location & Seq

Genomic Coordinates Reverse (-)

15952101 .. 15958548

Gene Structure 6448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G142300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAAGTTTATGAAACTTGGATCGAAGCCGGATTCGTTTCAGACTGATGGCAATAATGTTAGGTATGTAGCTACTGATTTGGCAACAGACATCATTGTTAATGTTGGAGATTCAAAGTTTTATCTGCATAAGTTTCCTCTTCTATCAAAGAGTGCACGCTTGCAGAAGTTGGTTGCAAACACTAACGAATCAAACACAGGCGAAATTTACATTTCTGACATTCCAGGTGGCCCTGCTGCCTTTGAGATATGTGCCAAGTTTTGTTATGGCATGACTGTCACTCTCAATGCTTACAATGTTGTTGTGTCTCGATGTGCTGCTGAATATCTGGGAATGCATGAGTCTATTGAGAAAGGAAATCTCATTTACAAGATTGATGTCTTCCTTAGCTCCAGCATTTTCCGGAGCTGGAAGGATTCAATCATTGTTCTTCAGACTACAAAGTCTCTTTTGCCAATATCTGAGGAACTAAAGTTGGTCAGCCAATGCATTGACTCTATAGCTACCAAGGCCTGTGTTGATGTTTCACAAGTTGACTGGTCCTATACCTATAATCGGAAGAAGATCCCTGAGGAAAATGGGAATGATCCAAATTGGAACGGTGTTAGAAATCGTCCAGTTCCAAAGGACTGGTGGGTTGAAGAATTGTGTGAGCTTGAGATTGATTTATACAAGCGTGTTCTAACGAATATCAAAACCAAAGCAGTACTTTCTGCTGAAGTGATAGGAGAAGCCTTGAAAGCTTATGCTTACAGAAGGTTTCCAGGTTTTAGCAAAGGTATGATCCAGGGTGGAGATATGGCAAAGCATCGATCAACAGTGGATACAATTGTCTGGCTGTTGCCTGAAGAGAAGGGTGGTGCCTCTTGTAGTTTCTTGCTCAAAATGTTAAAAGCAGCTATATTTTTGGACTCTGGAGACATGACTAAAGGAGAGCTGGTGAGGAGAATAGGGCAGCAACTGGAGGAGGCTTCTGTAAATGATCTTCTGATACGAGCAGCAGAAGGAGAACCTACAATTTATGATGTTACTGTAGTCCAAAAAATTGTTGAAGAGTTTCTAAGGCAAGATCAGAGTGCAGTAGAAGAACGCCATGAGCTTCTGGAGGTGAGGAGGCCGGGGATCTTGTCGGATGCTTCTAAGTTGATGGTGGCAAAACTGATAGATGGGTATCTTGCTGAAATTTCAAAGGATCCCCACCTACCCTTGTTGAAGTTTGTTGATCTTGCAGAGATGGTGAGAGGTTTCTCTCAGCCTTCTCATGATGGGCTCTACCGAGCCATTGATATGTATCTTAAGGAGCACCCGGGGATCAGCAAGAGTGAGAGGAAGAGGATATGCAAGCTGATGGACTGCAAAAAGCTATCAGTTGATGCGTGTATGCATGCCGTGCAAAATGAGAGACTTCCATTGCGTGTAGTTGTGCAGGTACTGTTTTTTGAGCAAGTCAGGGCAGCTGCTTCATCAGGCAGCAGCACTCCAGACCTGCCTAAAGGCATGAAGGATTTAAACAATGGGTCCCATGGGAGCTCAAGATCTGTGACAACCAACACAGAGGAGGATTGGGATGCAGTGGCCTCGGCTGAAGAGCTTAAGGCCCTAAAGGGGGAGCTAGCTTCCTTAAGGTTGAGCAGTGGTGTGGGAGGGGGTGAGAAGAATGGAGATGGCAAAGGCAGTGTTGACAAGGCGGCAGTCAGTAAAATGAGAGGGTTACTTAAGTCAAAGAAGAAGGTTTTTGCAAAGCTTTGGTCAAGCAAAGGGGTACAAGGTGAGAATAGTGGTTCTGATTCATCTGAAAGCCTTGGTTCTGCTAATCCTGAAGAGGCTAAATCCACACCTTCCAGAAATAGGAGGCATTCGGTTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009958 GO:0044464 GO:0050896 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

623

Amino Acids

68.67

Weight (kDa)

8.14

Isoelectric Point (pI)

39.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14820 AT2G14820
fragaria_vesca	FvH4_2g04110 FvH4_2g04110 FvH4_2g04110 FvH4_2g04110
malus_domestica	MD05G1098200.v1.1 MD10G1103900.v1.1
prunus_persica	Prupe.8G142300_v2.0.a1 Prupe.8G142300_v2.0.a1 Prupe.8G142300_v2.0.a1
pyrus_communis	pycom05g09610 pycom10g08930
rosa_chinensis	RchiOBHm_Chr6g0253481
rosa_laevigata	RLG00000015016
rosa_multiflora	Rmu_sc0030462.1_g000001 Rmu_ssc0000079.1_g000008
rosa_roxburghii	Rroxscaffold_7G00211860
rosa_rugosa	Rorug05G0544500 Rorug05G0544600 Rorug05G0544700 Rorug05G0544700
rosa_samantha	Rh3CG324600 Rh3DG323200 Rh6AG059600 Rh6BG053600 Rh6CG050700 Rh6DG047400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	442
Acc36I	ACCTGC	2 cut(s)	1417, 1494
AccB1I	GGYRCC	1 cut(s)	860
AccIII	TCCGGA	1 cut(s)	402
AciI	CCGC	1 cut(s)	1688
AclWI	GGATC	8 cut(s)	28, 559, 581, 778, 1130, 1187, 1200, 1319
AcsI	RAATTY	2 cut(s)	204, 1182
AcuI	CTGAAG	5 cut(s)	416, 738, 867, 1605, 1839
AfaI	GTAC	3 cut(s)	708, 1431, 1764
AfiI	CCNNNNNNNGG	4 cut(s)	555, 1605, 1606, 1848
AflII	CTTAAG	4 cut(s)	1295, 1592, 1621, 1715
AgsI	TTSAA	7 cut(s)	114, 420, 641, 739, 1052, 1188, 1213
AjnI	CCWGG	3 cut(s)	223, 763, 786
Alw21I	GWGCWC	3 cut(s)	157, 1305, 1532
Alw26I	GTCTC	4 cut(s)	312, 450, 912, 1396
Alw44I	GTGCAC	1 cut(s)	153
AlwI	GGATC	8 cut(s)	28, 559, 581, 778, 1130, 1187, 1200, 1319
AlwNI	CAGNNNCTG	2 cut(s)	961, 1432
Ama87I	CYCGRG	1 cut(s)	1306
Aor13HI	TCCGGA	1 cut(s)	402
AoxI	GGCC	5 cut(s)	229, 510, 1115, 1575, 1596
ApaLI	GTGCAC	1 cut(s)	153
ApeKI	GCWGC	9 cut(s)	236, 317, 896, 955, 998, 1454, 1457, 1470, 1473
ApoI	RAATTY	2 cut(s)	204, 1182
ArsI	GACNNNNNNTTYG	2 cut(s)	1733, 1765
Asp700I	GAANNNNTTC	1 cut(s)	1056
AspS9I	GGNCC	4 cut(s)	230, 540, 1518, 1597
AsuC2I	CCSGG	3 cut(s)	1119, 1307, 1308
AsuHPI	GGTGA	5 cut(s)	952, 1120, 1249, 1661, 1781
AsuNHI	GCTAGC	1 cut(s)	1612
AvaI	CYCGRG	1 cut(s)	1306
AvaII	GGWCC	2 cut(s)	540, 1518
AxyI	CCTNAGG	1 cut(s)	570
BaeGI	GKGCMC	1 cut(s)	157
BaeI	ACNNNNGTAYC	2 cut(s)	816, 849
BamHI	GGATCC	1 cut(s)	1192
BanI	GGYRCC	1 cut(s)	860
BanII	GRGCYC	2 cut(s)	1272, 1532
BarI	GAAGNNNNNNTAC	2 cut(s)	969, 1001
BbsI	GAAGAC	1 cut(s)	373
Bbv12I	GWGCWC	3 cut(s)	157, 1305, 1532
BbvI	GCAGC	9 cut(s)	223, 304, 908, 967, 1010, 1444, 1466, 1482, 1485
BccI	CCATC	7 cut(s)	41, 1141, 1160, 1228, 1259, 1342, 1658
BceAI	ACGGC	1 cut(s)	1373
BcgI	CGANNNNNNTGC	2 cut(s)	1560, 1594
BciT130I	CCWGG	3 cut(s)	225, 765, 788
BciVI	GTATCC	1 cut(s)	817
BcnI	CCSGG	3 cut(s)	1119, 1307, 1308
BcoDI	GTCTC	4 cut(s)	312, 450, 912, 1396
BfaI	CTAG	1 cut(s)	1613
BfmI	CTRYAG	2 cut(s)	498, 1032
BfrI	CTTAAG	4 cut(s)	1295, 1592, 1621, 1715
BfuAI	ACCTGC	2 cut(s)	1417, 1494
BfuI	GTATCC	1 cut(s)	817
BglII	AGATCT	1 cut(s)	1535
BmcAI	AGTACT	1 cut(s)	708
Bme1390I	CCNGG	6 cut(s)	225, 765, 788, 1119, 1307, 1308
Bme18I	GGWCC	2 cut(s)	540, 1518
BmeT110I	CYCGRG	1 cut(s)	1306
BmgT120I	GGNCC	4 cut(s)	230, 540, 1518, 1597
BmiI	GGNNCC	4 cut(s)	862, 1194, 1519, 1520
BmrFI	CCNGG	6 cut(s)	225, 765, 788, 1119, 1307, 1308
BmsI	GCATC	4 cut(s)	817, 1123, 1363, 1558
BmtI	GCTAGC	1 cut(s)	1616
BpiI	GAAGAC	1 cut(s)	373
BpmI	CTGGAG	5 cut(s)	376, 936, 983, 1124, 1464
Bpu10I	CCTNAGC	1 cut(s)	386
BpuEI	CTTGAG	2 cut(s)	677, 1516
BpuMI	CCSGG	3 cut(s)	1119, 1307, 1308
Bsa29I	ATCGAT	1 cut(s)	811
BsaBI	GATNNNNATC	2 cut(s)	1170, 1290
BsaJI	CCNNGG	8 cut(s)	507, 787, 1118, 1306, 1307, 1522, 1578, 1801
BsaWI	WCCGGW	1 cut(s)	402
BsaXI	ACNNNNNCTCC	2 cut(s)	924, 954
Bsc4I	CCNNNNNNNGG	4 cut(s)	555, 1605, 1606, 1848
Bse1I	ACTGG	4 cut(s)	542, 617, 635, 966
Bse21I	CCTNAGG	1 cut(s)	570
Bse3DI	GCAATG	1 cut(s)	1409
Bse8I	GATNNNNATC	2 cut(s)	1170, 1290
BseAI	TCCGGA	1 cut(s)	402
BseBI	CCWGG	3 cut(s)	225, 765, 788
BseCI	ATCGAT	1 cut(s)	811
BseDI	CCNNGG	8 cut(s)	507, 787, 1118, 1306, 1307, 1522, 1578, 1801
BseGI	GGATG	2 cut(s)	1138, 1573
BseJI	GATNNNNATC	2 cut(s)	1170, 1290
BseLI	CCNNNNNNNGG	4 cut(s)	555, 1605, 1606, 1848
BseMI	GCAATG	1 cut(s)	1409
BseMII	CTCAG	3 cut(s)	453, 561, 1265
BseNI	ACTGG	4 cut(s)	542, 617, 635, 966
BseRI	GAGGAG	4 cut(s)	958, 980, 1126, 1571
BseSI	GKGCMC	1 cut(s)	157
BseXI	GCAGC	9 cut(s)	223, 304, 908, 967, 1010, 1444, 1466, 1482, 1485
BsgI	GTGCAG	2 cut(s)	1098, 1445
BshFI	GGCC	5 cut(s)	231, 512, 1117, 1577, 1598
BshNI	GGYRCC	1 cut(s)	860
BshVI	ATCGAT	1 cut(s)	811
BsiHKAI	GWGCWC	3 cut(s)	157, 1305, 1532
BsiHKCI	CYCGRG	1 cut(s)	1306
BsiSI	CCGG	4 cut(s)	29, 403, 1118, 1307
BslFI	GGGAC	1 cut(s)	1504
BslI	CCNNNNNNNGG	4 cut(s)	555, 1605, 1606, 1848
BsmAI	GTCTC	4 cut(s)	312, 450, 912, 1396
BsmFI	GGGAC	1 cut(s)	1504
BsmI	GAATGC	2 cut(s)	339, 1855
BsnI	GGCC	5 cut(s)	231, 512, 1117, 1577, 1598
BsoBI	CYCGRG	1 cut(s)	1306
Bsp1286I	GDGCHC	4 cut(s)	157, 1272, 1305, 1532
Bsp13I	TCCGGA	1 cut(s)	402
Bsp19I	CCATGG	1 cut(s)	1522
BspACI	CCGC	1 cut(s)	1688
BspANI	GGCC	5 cut(s)	231, 512, 1117, 1577, 1598
BspCNI	CTCAG	3 cut(s)	454, 562, 1264
BspDI	ATCGAT	1 cut(s)	811
BspEI	TCCGGA	1 cut(s)	402
BspHI	TCATGA	1 cut(s)	1261
BspLI	GGNNCC	4 cut(s)	862, 1194, 1519, 1520
BspMI	ACCTGC	2 cut(s)	1417, 1494
BspOI	GCTAGC	1 cut(s)	1616
BspPI	GGATC	8 cut(s)	28, 559, 581, 778, 1130, 1187, 1200, 1319
BspQI	GCTCTTC	1 cut(s)	1581
BspT107I	GGYRCC	1 cut(s)	860
BspTI	CTTAAG	4 cut(s)	1295, 1592, 1621, 1715
BsrDI	GCAATG	1 cut(s)	1409
BsrI	ACTGG	4 cut(s)	542, 617, 635, 966
BssECI	CCNNGG	8 cut(s)	507, 787, 1118, 1306, 1307, 1522, 1578, 1801
BssT1I	CCWWGG	3 cut(s)	507, 1522, 1801
Bst2UI	CCWGG	3 cut(s)	225, 765, 788
Bst4CI	ACNGT	5 cut(s)	277, 602, 820, 1033, 1434
Bst6I	CTCTTC	6 cut(s)	144, 843, 1047, 1325, 1581, 1815
BstAFI	CTTAAG	4 cut(s)	1295, 1592, 1621, 1715
BstAPI	GCANNNNNTGC	1 cut(s)	1390
BstC8I	GCNNGC	5 cut(s)	157, 161, 1343, 1386, 1614
BstDEI	CTNAG	7 cut(s)	386, 462, 570, 1061, 1140, 1251, 1866
BstDSI	CCRYGG	1 cut(s)	1522
BstF5I	GGATG	2 cut(s)	1138, 1573
BstMAI	GTCTC	4 cut(s)	312, 450, 912, 1396
BstMWI	GCNNNNNNNGC	3 cut(s)	509, 740, 1390
BstNI	CCWGG	3 cut(s)	225, 765, 788
BstNSI	RCATGY	1 cut(s)	1388
BstSCI	CCNGG	6 cut(s)	223, 763, 786, 1117, 1305, 1306
BstSFI	CTRYAG	2 cut(s)	498, 1032
BstSLI	GKGCMC	1 cut(s)	157
BstV1I	GCAGC	9 cut(s)	223, 304, 908, 967, 1010, 1444, 1466, 1482, 1485
BstV2I	GAAGAC	1 cut(s)	373
BstX2I	RGATCY	4 cut(s)	564, 1122, 1192, 1535
BstXI	CCANNNNNNTGG	1 cut(s)	630
BstYI	RGATCY	4 cut(s)	564, 1122, 1192, 1535
Bsu15I	ATCGAT	1 cut(s)	811
Bsu36I	CCTNAGG	1 cut(s)	570
BsuI	GTATCC	1 cut(s)	817
BsuRI	GGCC	5 cut(s)	231, 512, 1117, 1577, 1598
BsuTUI	ATCGAT	1 cut(s)	811
BtgI	CCRYGG	1 cut(s)	1522
BtsCI	GGATG	2 cut(s)	1138, 1573
BtsI	GCAGTG	3 cut(s)	1578, 1639, 1681
BtsIMutI	CAGTG	4 cut(s)	825, 1578, 1639, 1681
BveI	ACCTGC	2 cut(s)	1417, 1494
Cac8I	GCNNGC	5 cut(s)	157, 161, 1343, 1386, 1614
CaiI	CAGNNNCTG	2 cut(s)	961, 1432
CciI	TCATGA	1 cut(s)	1261
Cfr13I	GGNCC	4 cut(s)	230, 540, 1518, 1597
Cfr9I	CCCGGG	1 cut(s)	1306
ClaI	ATCGAT	1 cut(s)	811
Csp6I	GTAC	3 cut(s)	707, 1430, 1763
CviAII	CATG	8 cut(s)	271, 338, 922, 1094, 1262, 1385, 1498, 1523
CviQI	GTAC	3 cut(s)	707, 1430, 1763
DdeI	CTNAG	7 cut(s)	386, 462, 570, 1061, 1140, 1251, 1866
DraI	TTTAAA	1 cut(s)	1509
DrdI	GACNNNNNNGTC	1 cut(s)	442
DseDI	GACNNNNNNGTC	1 cut(s)	442
Eam1104I	CTCTTC	6 cut(s)	144, 843, 1047, 1325, 1581, 1815
EarI	CTCTTC	6 cut(s)	144, 843, 1047, 1325, 1581, 1815
Ecl136II	GAGCTC	1 cut(s)	1530
Eco130I	CCWWGG	3 cut(s)	507, 1522, 1801
Eco147I	AGGCCT	1 cut(s)	512
Eco24I	GRGCYC	2 cut(s)	1272, 1532
Eco47I	GGWCC	2 cut(s)	540, 1518
Eco53kI	GAGCTC	1 cut(s)	1530
Eco57I	CTGAAG	5 cut(s)	416, 738, 867, 1605, 1839
Eco81I	CCTNAGG	1 cut(s)	570
Eco88I	CYCGRG	1 cut(s)	1306
EcoICRI	GAGCTC	1 cut(s)	1530
EcoO109I	RGGNCCY	2 cut(s)	1518, 1597
EcoRII	CCWGG	3 cut(s)	223, 763, 786
EcoT14I	CCWWGG	3 cut(s)	507, 1522, 1801
EcoT22I	ATGCAT	3 cut(s)	339, 491, 1386
EcoT38I	GRGCYC	2 cut(s)	1272, 1532
ErhI	CCWWGG	3 cut(s)	507, 1522, 1801
FaeI	CATG	8 cut(s)	274, 341, 925, 1097, 1265, 1388, 1501, 1526
FalI	AAGNNNNNCTT	2 cut(s)	693, 725
FaqI	GGGAC	1 cut(s)	1504
FatI	CATG	8 cut(s)	270, 337, 921, 1093, 1261, 1384, 1497, 1522
FokI	GGATG	2 cut(s)	1145, 1580
FriOI	GRGCYC	2 cut(s)	1272, 1532
FspBI	CTAG	1 cut(s)	1613
GsuI	CTGGAG	5 cut(s)	376, 936, 983, 1124, 1464
HaeIII	GGCC	5 cut(s)	231, 512, 1117, 1577, 1598
HapII	CCGG	4 cut(s)	29, 403, 1118, 1307
Hin1II	CATG	8 cut(s)	274, 341, 925, 1097, 1265, 1388, 1501, 1526
HincII	GTYRAC	2 cut(s)	535, 1681
HindII	GTYRAC	2 cut(s)	535, 1681
HindIII	AAGCTT	2 cut(s)	741, 1742
HinfI	GANTC	8 cut(s)	32, 110, 188, 341, 416, 494, 911, 1787
HpaII	CCGG	4 cut(s)	29, 403, 1118, 1307
HphI	GGTGA	5 cut(s)	952, 1120, 1249, 1661, 1781
Hpy166II	GTNNAC	3 cut(s)	155, 535, 1681
Hpy188III	TCNNGA	9 cut(s)	309, 403, 915, 1103, 1262, 1481, 1533, 1817, 1842
Hpy8I	GTNNAC	3 cut(s)	155, 535, 1681
HpyAV	CCTTC	8 cut(s)	406, 750, 847, 998, 1266, 1495, 1723, 1848
HpyCH4III	ACNGT	5 cut(s)	277, 602, 820, 1033, 1434
HpyF10VI	GCNNNNNNNGC	3 cut(s)	509, 740, 1390
HpyF3I	CTNAG	7 cut(s)	386, 462, 570, 1061, 1140, 1251, 1866
Hsp92II	CATG	8 cut(s)	274, 341, 925, 1097, 1265, 1388, 1501, 1526
KflI	GGGWCCC	1 cut(s)	1518
Kpn2I	TCCGGA	1 cut(s)	402
LguI	GCTCTTC	1 cut(s)	1581
LmnI	GCTCC	5 cut(s)	395, 405, 1300, 1527, 1609
Lsp1109I	GCAGC	9 cut(s)	223, 304, 908, 967, 1010, 1444, 1466, 1482, 1485
LweI	GCATC	4 cut(s)	817, 1123, 1363, 1558
MaeI	CTAG	1 cut(s)	1613
MaeIII	GTNAC	4 cut(s)	277, 1027, 1540, 1710
MfeI	CAATTG	1 cut(s)	828
MflI	RGATCY	4 cut(s)	564, 1122, 1192, 1535
MhlI	GDGCHC	4 cut(s)	157, 1272, 1305, 1532
MluCI	AATT	7 cut(s)	204, 592, 644, 828, 1017, 1044, 1182
MlyI	GAGTC	3 cut(s)	350, 488, 905
MmeI	TCCRAC	2 cut(s)	85, 1110
Mph1103I	ATGCAT	3 cut(s)	339, 491, 1386
MroI	TCCGGA	1 cut(s)	402
MroXI	GAANNNNTTC	1 cut(s)	1056
MseI	TTAA	7 cut(s)	99, 890, 1296, 1508, 1593, 1622, 1716
MslI	CAYNNNNRTG	1 cut(s)	1286
MspA1I	CMGCKG	1 cut(s)	1457
MspCI	CTTAAG	4 cut(s)	1295, 1592, 1621, 1715
MspI	CCGG	4 cut(s)	29, 403, 1118, 1307
MspR9I	CCNGG	6 cut(s)	225, 765, 788, 1119, 1307, 1308
MunI	CAATTG	1 cut(s)	828
Mva1269I	GAATGC	2 cut(s)	339, 1855
MvaI	CCWGG	3 cut(s)	225, 765, 788
MwoI	GCNNNNNNNGC	3 cut(s)	509, 740, 1390
NciI	CCSGG	3 cut(s)	1119, 1307, 1308
NcoI	CCATGG	1 cut(s)	1522
NheI	GCTAGC	1 cut(s)	1612
NlaIII	CATG	8 cut(s)	274, 341, 925, 1097, 1265, 1388, 1501, 1526
NlaIV	GGNNCC	4 cut(s)	862, 1194, 1519, 1520
NmeAIII	GCCGAG	1 cut(s)	1559
NmuCI	GTSAC	2 cut(s)	277, 1540
NsiI	ATGCAT	3 cut(s)	339, 491, 1386
NspI	RCATGY	1 cut(s)	1388
PaeI	GCATGC	1 cut(s)	1388
PagI	TCATGA	1 cut(s)	1261
PceI	AGGCCT	1 cut(s)	512
PciSI	GCTCTTC	1 cut(s)	1581
PctI	GAATGC	2 cut(s)	339, 1855
PdmI	GAANNNNTTC	1 cut(s)	1056
PfeI	GAWTC	5 cut(s)	32, 110, 188, 416, 1787
PleI	GAGTC	3 cut(s)	349, 488, 905
PpsI	GAGTC	3 cut(s)	349, 488, 905
PpuMI	RGGWCCY	1 cut(s)	1518
Psp124BI	GAGCTC	1 cut(s)	1532
Psp5II	RGGWCCY	1 cut(s)	1518
Psp6I	CCWGG	3 cut(s)	223, 763, 786
PspGI	CCWGG	3 cut(s)	223, 763, 786
PspN4I	GGNNCC	4 cut(s)	862, 1194, 1519, 1520
PspPI	GGNCC	4 cut(s)	230, 540, 1518, 1597
PspPPI	RGGWCCY	1 cut(s)	1518
PstNI	CAGNNNCTG	2 cut(s)	961, 1432
PsuI	RGATCY	4 cut(s)	564, 1122, 1192, 1535
PvuII	CAGCTG	1 cut(s)	1457
RsaI	GTAC	3 cut(s)	708, 1431, 1764
RsaNI	GTAC	3 cut(s)	707, 1430, 1763
RseI	CAYNNNNRTG	1 cut(s)	1286
SacI	GAGCTC	1 cut(s)	1532
SapI	GCTCTTC	1 cut(s)	1581
SaqAI	TTAA	7 cut(s)	99, 890, 1296, 1508, 1593, 1622, 1716
Sau96I	GGNCC	4 cut(s)	230, 540, 1518, 1597
ScaI	AGTACT	1 cut(s)	708
SchI	GAGTC	3 cut(s)	350, 488, 905
ScrFI	CCNGG	6 cut(s)	225, 765, 788, 1119, 1307, 1308
SduI	GDGCHC	4 cut(s)	157, 1272, 1305, 1532
SfaNI	GCATC	4 cut(s)	817, 1123, 1363, 1558
SfcI	CTRYAG	2 cut(s)	498, 1032
SinI	GGWCC	2 cut(s)	540, 1518
SmaI	CCCGGG	1 cut(s)	1308
SmiMI	CAYNNNNRTG	1 cut(s)	1286
SmlI	CTYRAG	6 cut(s)	656, 1295, 1531, 1592, 1621, 1715
SmoI	CTYRAG	6 cut(s)	656, 1295, 1531, 1592, 1621, 1715
SphI	GCATGC	1 cut(s)	1388
Sse9I	AATT	7 cut(s)	204, 592, 644, 828, 1017, 1044, 1182
SseBI	AGGCCT	1 cut(s)	512
SsiI	CCGC	1 cut(s)	1688
SspMI	CTAG	1 cut(s)	1613
SstI	GAGCTC	1 cut(s)	1532
StuI	AGGCCT	1 cut(s)	512
StyD4I	CCNGG	6 cut(s)	223, 763, 786, 1117, 1305, 1306
StyI	CCWWGG	3 cut(s)	507, 1522, 1801
TaaI	ACNGT	5 cut(s)	277, 602, 820, 1033, 1434
TaqI	TCGA	3 cut(s)	23, 310, 811
TasI	AATT	7 cut(s)	204, 592, 644, 828, 1017, 1044, 1182
TatI	WGTACW	1 cut(s)	706
TauI	GCSGC	1 cut(s)	1691
TfiI	GAWTC	5 cut(s)	32, 110, 188, 416, 1787
Tru1I	TTAA	7 cut(s)	99, 890, 1296, 1508, 1593, 1622, 1716
Tru9I	TTAA	7 cut(s)	99, 890, 1296, 1508, 1593, 1622, 1716
TscAI	CASTG	4 cut(s)	825, 1578, 1639, 1681
TseFI	GTSAC	2 cut(s)	277, 1540
TseI	GCWGC	9 cut(s)	236, 317, 896, 955, 998, 1454, 1457, 1470, 1473
Tsp45I	GTSAC	2 cut(s)	277, 1540
TspDTI	ATGAA	5 cut(s)	17, 26, 1452, 1514, 1779
TspMI	CCCGGG	1 cut(s)	1306
TspRI	CASTG	4 cut(s)	825, 1578, 1639, 1681
Vha464I	CTTAAG	4 cut(s)	1295, 1592, 1621, 1715
VneI	GTGCAC	1 cut(s)	153
VpaK11BI	GGWCC	2 cut(s)	540, 1518
XapI	RAATTY	2 cut(s)	204, 1182
XceI	RCATGY	1 cut(s)	1388
XcmI	CCANNNNNNNNNTGG	1 cut(s)	630
XmaI	CCCGGG	1 cut(s)	1306
XmnI	GAANNNNTTC	1 cut(s)	1056
XspI	CTAG	1 cut(s)	1613
ZrmI	AGTACT	1 cut(s)	708
Zsp2I	ATGCAT	3 cut(s)	339, 491, 1386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.