FvH4_2g06100

VID27 cytoplasmic protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0013857
Physical Location & Seq
Reverse (-)
5076097 .. 5079671
3575 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g06100.t1

Sequence Viewer

Length: 1896 bp
ATGGGAACCTCTCAGAGCCGCGAGGACCACATCTCCGACTCCGACGACTACTCCGAAGAAGAAGACGAACGACAACGCCAATCCGACGACGAAGACTATCAGGACGCTCCGGAGACCCAGCCCACCCCGATCGGCGACATCGACGCCAAGCTCAAAGCCTTGAAGCTCAAGTACGGTACTCCTCCACCTTCTTCTTCTTCCTCCGCCTCCGCCTCCGTCGTCTCGCATAACGCCGTCAAGCTCTACCTCCACATCGGCGGCAACACTCCCAACGCCAAGTGGATCGTCTCCAGCAAGCTCACATCGTTCTCCTTCGTCAAGACCACCAACGTCGACGGCGACAGCGACGACGACGACTACGAGGGCTCCGCCGACGGCAAGGGACAGTGGATTCTCAAGGTTGCGGGAAAAGTAAGGGCTAGGGTTTCCGCCGACATGCAGTTGAAGATGTTCGGCGATCAGCGACGTGTGGATTTTGTGTCCAAAGGAGTCTGGGCTTTGAAATTCTACACCGACGAGCAGTACCGGAGATTCGTGACGGAGTTTCAGGACTGCTTGTTTGAGAATGTGTACGGGCTTAAGGCGACGGAGGAGAACAAGGTCAAGATTTACGGCAAGGAGTTTTTGGGCTGGGTGAAGCCGGAGGCGGCGGACGACTCGGCGTGGGAGTATGCTGATGATTATGACATGGCGAGGAGCCCCAATTCGGTGACGCCGGTCCGGTCCAACCAGCAGTTGATGGAGGAGTTCGAGGAGGCTGCGAATGGAGGTGTTCAGAGCTTGACACTTGGCGCATTGGATAATAGTTTCTTGGTGAATGATTCTGGTGTGCAGGTTTATAAGAATTTCAGCCATGGGATTCATGGGAAGGGCGTGGTTGCGAAATTCGACAGTGGGGGTGGTTTGAAAATGACGCCCAAGAAGGCTCTGCTGATGAGGGGTGAGACTAATATGATGCTTATGAGTCCATTAAAGGAGGGGAAGCCTCAAGCGAATGGGCTGCAGCAGCTGGACATTGAGACTGGGAAGATTGTGACTGAGTGGAAGTTTGAGAAGGATGGGACTGAGATGACAATGAGGGATATTACTAATGACACAAAAGGGTCGCAGTTGGATCCTTCTGAGTCGACGTTTCTGGGTCTGGATGATAACAGGCTTTGCCAGTGGGATATGCGTGAGCGTAGAGGAATGGTTCAGAACATTGCTAATTCGCCTGTCCTGGAGTGGTCTCAGGGGCATCAGTTTTCGAGAGGGACGAATTTTCAGTGCTTTGCTACTACTGGAGATGGGTCTATTGTTGTTGGGTCTCTGGATGGGAAGATACGGTTGTATTCAAAGACCTCAATGAGGCAGGCAAAGACTGCGTTTCCAGGGCTGGGTTCCCCCATTACTCATGTTGATGTGACTTATGATGGGAAGTGGGTGTTGGGTACGACCGACACTTATTTGGTCCTTATATGCACTTTGTTCACTGACAAAGATGGAAAGACAAAGACTGGGTTTAGTGGTAGAATGGGAAACAAGATACCAGCTCCCAGGTTGTTGAAGCTGATCCCTCTTGACTCGCATTTGGCTGGCGCAGACAACAAGTTCCATGGAGGCCATTTCTCTTGGGTCACTGAAAGTGGTAAACAAGAGCGTCACCTCGTTGCAACAGTGGGAAAGTTCAGTGTCATATGGGATTTCCAGCAGGTGAAAAACAGTGCCCATGAATGTTACAGGAATCAGCAAGGCCTCAAGAGTTGTTACTGCTACAAGATTCTTTTGAAGGACGAGTCCATTGTGGAGAGCCGTTTCATGCATGATAAGTATGCTGTCAGCGACTCCCCAGAAGCTCCCCTGGTGGTGGCAACCCCAATGAAAGTCAGCTCGATCAGCCTCTCTGGCAAAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VID27

Protein Analysis

632

Amino Acids

70.11

Weight (kDa)

5.74

Isoelectric Point (pI)

36.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7135 PF23581 35 - 205 4e-72 Domain of unknown function (DUF7135)
VID27 PF08553 261 - 574 1.7e-46 VID27 C-terminal WD40-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013857)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19240
fragaria_vesca FvH4_2g06100
malus_domestica MD05G1080700.v1.1
prunus_persica Prupe.8G124300_v2.0.a1
pyrus_communis pycom05g07340
rosa_chinensis RchiOBHm_Chr6g0257121
rosa_laevigata RLG00000014677
rosa_multiflora Rmu_co8449469.1_g000001 Rmu_sc0000659.1_g000002
rosa_roxburghii Rroxscaffold_7G00208510
rosa_rugosa Rorug05G0575200
rosa_samantha Rh2BG009300 Rh6AG093100 Rh6BG084000 Rh6CG080400 Rh6DG075800
rosa_wichuraiana Rw6G008010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 840
AarI CACCTGC 1 cut(s) 1681
Acc36I ACCTGC 2 cut(s) 823, 1681
AccI GTMKAC 2 cut(s) 333, 1127
AccII CGCG 1 cut(s) 21
AccIII TCCGGA 1 cut(s) 109
AciI CCGC 9 cut(s) 19, 204, 210, 258, 369, 404, 429, 647, 650
AclWI GGATC 4 cut(s) 290, 1109, 1122, 1546
AcsI RAATTY 4 cut(s) 503, 844, 884, 1258
AcyI GRCGYC 3 cut(s) 144, 713, 914
AfaI GTAC 5 cut(s) 173, 178, 524, 572, 1432
AfiI CCNNNNNNNGG 4 cut(s) 706, 1347, 1376, 1846
AflII CTTAAG 1 cut(s) 578
AflIII ACRYGT 1 cut(s) 466
AgsI TTSAA 7 cut(s) 163, 445, 502, 907, 1335, 1546, 1768
AjiI CACGTC 1 cut(s) 467
AjnI CCWGG 4 cut(s) 1218, 1369, 1535, 1839
AjuI GAANNNNNNNTTGG 2 cut(s) 1409, 1441
Alw26I GTCTC 7 cut(s) 107, 226, 292, 938, 1013, 1233, 1311
AlwI GGATC 4 cut(s) 290, 1109, 1122, 1546
AlwNI CAGNNNCTG 1 cut(s) 1009
Aor13HI TCCGGA 1 cut(s) 109
AoxI GGCC 2 cut(s) 1600, 1732
ApeKI GCWGC 4 cut(s) 758, 1000, 1003, 1006
ApoI RAATTY 4 cut(s) 503, 844, 884, 1258
ArsI GACNNNNNNTTYG 2 cut(s) 542, 574
Asp700I GAANNNNTTC 1 cut(s) 449
AspLEI GCGC 2 cut(s) 794, 1580
AspS9I GGNCC 4 cut(s) 25, 718, 723, 1450
AsuHPI GGTGA 6 cut(s) 646, 721, 826, 953, 1634, 1705
AvaII GGWCC 4 cut(s) 25, 718, 723, 1450
BaeGI GKGCMC 1 cut(s) 1708
BaeI ACNNNNGTAYC 2 cut(s) 1313, 1346
BamHI GGATCC 1 cut(s) 1114
BanII GRGCYC 2 cut(s) 368, 701
BarI GAAGNNNNNNTAC 2 cut(s) 155, 187
BbsI GAAGAC 2 cut(s) 69, 99
BbvI GCAGC 4 cut(s) 745, 987, 1015, 1018
BccI CCATC 6 cut(s) 733, 1052, 1280, 1307, 1406, 1475
BceAI ACGGC 5 cut(s) 218, 352, 391, 628, 1776
BcgI CGANNNNNNTGC 4 cut(s) 740, 774, 982, 1016
BciT130I CCWGG 4 cut(s) 1220, 1371, 1537, 1841
BcoDI GTCTC 7 cut(s) 107, 226, 292, 938, 1013, 1233, 1311
BfaI CTAG 1 cut(s) 420
BfmI CTRYAG 1 cut(s) 1001
BfrI CTTAAG 1 cut(s) 578
BfuAI ACCTGC 2 cut(s) 823, 1681
BglI GCCNNNNNGGC 1 cut(s) 1884
BisI GCNGC 7 cut(s) 19, 259, 648, 759, 1001, 1004, 1007
BlsI GCNGC 7 cut(s) 20, 260, 649, 760, 1002, 1005, 1008
Bme1390I CCNGG 4 cut(s) 1220, 1371, 1537, 1841
Bme18I GGWCC 4 cut(s) 25, 718, 723, 1450
BmgBI CACGTC 1 cut(s) 467
BmgT120I GGNCC 4 cut(s) 25, 718, 723, 1450
BmiI GGNNCC 5 cut(s) 7, 367, 698, 1116, 1381
BmrFI CCNGG 4 cut(s) 1220, 1371, 1537, 1841
BmrI ACTGGG 2 cut(s) 1032, 1506
BmsI GCATC 2 cut(s) 945, 1246
BmuI ACTGGG 2 cut(s) 1032, 1506
BoxI GACNNNNGTC 1 cut(s) 716
BpiI GAAGAC 2 cut(s) 69, 99
BpmI CTGGAG 3 cut(s) 274, 1241, 1302
BpuEI CTTGAG 4 cut(s) 152, 380, 972, 1721
BsaHI GRCGYC 3 cut(s) 144, 713, 914
BsaI GGTCTC 3 cut(s) 107, 1233, 1311
BsaJI CCNNGG 5 cut(s) 853, 1370, 1535, 1594, 1839
BsaWI WCCGGW 3 cut(s) 109, 525, 720
BsaXI ACNNNNNCTCC 6 cut(s) 17, 35, 47, 65, 350, 380
Bsc4I CCNNNNNNNGG 4 cut(s) 706, 1347, 1376, 1846
Bse118I RCCGGY 1 cut(s) 715
Bse1I ACTGG 4 cut(s) 1027, 1162, 1285, 1501
Bse3DI GCAATG 1 cut(s) 1200
BseAI TCCGGA 1 cut(s) 109
BseBI CCWGG 4 cut(s) 1220, 1371, 1537, 1841
BseDI CCNNGG 5 cut(s) 853, 1370, 1535, 1594, 1839
BseGI GGATG 3 cut(s) 1063, 1150, 1318
BseLI CCNNNNNNNGG 4 cut(s) 706, 1347, 1376, 1846
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 5 cut(s) 26, 1029, 1056, 1113, 1244
BseNI ACTGG 4 cut(s) 1027, 1162, 1285, 1501
BseRI GAGGAG 5 cut(s) 171, 605, 709, 758, 767
BseSI GKGCMC 1 cut(s) 1708
BseXI GCAGC 4 cut(s) 745, 987, 1015, 1018
BseYI CCCAGC 3 cut(s) 117, 630, 1375
BsgI GTGCAG 1 cut(s) 851
Bsh1236I CGCG 1 cut(s) 21
Bsh1285I CGRYCG 2 cut(s) 132, 1437
BshFI GGCC 2 cut(s) 1602, 1734
BsiEI CGRYCG 2 cut(s) 132, 1437
BsiSI CCGG 5 cut(s) 110, 526, 641, 716, 721
BslFI GGGAC 3 cut(s) 396, 1075, 1267
BslI CCNNNNNNNGG 4 cut(s) 706, 1347, 1376, 1846
BsmAI GTCTC 7 cut(s) 107, 226, 292, 938, 1013, 1233, 1311
BsmBI CGTCTC 2 cut(s) 226, 292
BsmFI GGGAC 3 cut(s) 396, 1075, 1267
BsnI GGCC 2 cut(s) 1602, 1734
Bso31I GGTCTC 3 cut(s) 107, 1233, 1311
Bsp1286I GDGCHC 3 cut(s) 368, 701, 1708
Bsp13I TCCGGA 1 cut(s) 109
Bsp143I GATC 6 cut(s) 129, 282, 457, 1114, 1551, 1872
Bsp19I CCATGG 2 cut(s) 853, 1594
BspACI CCGC 9 cut(s) 19, 204, 210, 258, 369, 404, 429, 647, 650
BspANI GGCC 2 cut(s) 1602, 1734
BspCNI CTCAG 5 cut(s) 25, 1030, 1057, 1114, 1243
BspEI TCCGGA 1 cut(s) 109
BspFNI CGCG 1 cut(s) 21
BspLI GGNNCC 5 cut(s) 7, 367, 698, 1116, 1381
BspMAI CTGCAG 1 cut(s) 1005
BspMI ACCTGC 2 cut(s) 823, 1681
BspPI GGATC 4 cut(s) 290, 1109, 1122, 1546
BspTI CTTAAG 1 cut(s) 578
BspTNI GGTCTC 3 cut(s) 107, 1233, 1311
BsrDI GCAATG 1 cut(s) 1200
BsrFI RCCGGY 1 cut(s) 715
BsrI ACTGG 4 cut(s) 1027, 1162, 1285, 1501
BssAI RCCGGY 1 cut(s) 715
BssECI CCNNGG 5 cut(s) 853, 1370, 1535, 1594, 1839
BssMI GATC 6 cut(s) 129, 282, 457, 1114, 1551, 1872
BssNI GRCGYC 3 cut(s) 144, 713, 914
BssT1I CCWWGG 2 cut(s) 853, 1594
Bst2UI CCWGG 4 cut(s) 1220, 1371, 1537, 1841
Bst4CI ACNGT 6 cut(s) 176, 387, 893, 1326, 1657, 1703
BstACI GRCGYC 3 cut(s) 144, 713, 914
BstAFI CTTAAG 1 cut(s) 578
BstAPI GCANNNNNTGC 1 cut(s) 1361
BstC8I GCNNGC 3 cut(s) 296, 1353, 1576
BstDEI CTNAG 5 cut(s) 12, 1038, 1065, 1122, 1230
BstDSI CCRYGG 2 cut(s) 853, 1594
BstENI CCTNNNNNAGG 1 cut(s) 1345
BstF5I GGATG 3 cut(s) 1063, 1150, 1318
BstFNI CGCG 1 cut(s) 21
BstHHI GCGC 2 cut(s) 794, 1580
BstKTI GATC 6 cut(s) 132, 285, 460, 1117, 1554, 1875
BstMAI GTCTC 7 cut(s) 107, 226, 292, 938, 1013, 1233, 1311
BstMBI GATC 6 cut(s) 129, 282, 457, 1114, 1551, 1872
BstMCI CGRYCG 2 cut(s) 132, 1437
BstMWI GCNNNNNNNGC 4 cut(s) 1006, 1361, 1875, 1884
BstNI CCWGG 4 cut(s) 1220, 1371, 1537, 1841
BstNSI RCATGY 1 cut(s) 439
BstPAI GACNNNNGTC 1 cut(s) 716
BstSCI CCNGG 4 cut(s) 1218, 1369, 1535, 1839
BstSFI CTRYAG 1 cut(s) 1001
BstSLI GKGCMC 1 cut(s) 1708
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 4 cut(s) 745, 987, 1015, 1018
BstV2I GAAGAC 2 cut(s) 69, 99
BstX2I RGATCY 1 cut(s) 1114
BstYI RGATCY 1 cut(s) 1114
BsuRI GGCC 2 cut(s) 1602, 1734
BtgI CCRYGG 2 cut(s) 853, 1594
BtrI CACGTC 1 cut(s) 467
BtsCI GGATG 3 cut(s) 1063, 1150, 1318
BtsIMutI CAGTG 9 cut(s) 392, 898, 1169, 1271, 1470, 1617, 1662, 1675, 1708
BveI ACCTGC 2 cut(s) 823, 1681
Cac8I GCNNGC 3 cut(s) 296, 1353, 1576
CaiI CAGNNNCTG 1 cut(s) 1009
CfoI GCGC 2 cut(s) 794, 1580
Cfr10I RCCGGY 1 cut(s) 715
Cfr13I GGNCC 4 cut(s) 25, 718, 723, 1450
CpoI CGGWCCG 1 cut(s) 718
CseI GACGC 5 cut(s) 113, 152, 721, 922, 1628
Csp6I GTAC 5 cut(s) 172, 177, 523, 571, 1431
CspI CGGWCCG 1 cut(s) 718
CviAII CATG 9 cut(s) 436, 688, 854, 863, 1394, 1595, 1709, 1798, 1802
CviQI GTAC 5 cut(s) 172, 177, 523, 571, 1431
DdeI CTNAG 5 cut(s) 12, 1038, 1065, 1122, 1230
DpnI GATC 6 cut(s) 131, 284, 459, 1116, 1553, 1874
DpnII GATC 6 cut(s) 129, 282, 457, 1114, 1551, 1872
EciI GGCGGA 5 cut(s) 193, 199, 358, 418, 665
Eco130I CCWWGG 2 cut(s) 853, 1594
Eco147I AGGCCT 1 cut(s) 1734
Eco24I GRGCYC 2 cut(s) 368, 701
Eco31I GGTCTC 3 cut(s) 107, 1233, 1311
Eco47I GGWCC 4 cut(s) 25, 718, 723, 1450
EcoNI CCTNNNNNAGG 1 cut(s) 1345
EcoRII CCWGG 4 cut(s) 1218, 1369, 1535, 1839
EcoT14I CCWWGG 2 cut(s) 853, 1594
EcoT22I ATGCAT 1 cut(s) 1803
EcoT38I GRGCYC 2 cut(s) 368, 701
ErhI CCWWGG 2 cut(s) 853, 1594
Esp3I CGTCTC 2 cut(s) 226, 292
FaeI CATG 9 cut(s) 439, 691, 857, 866, 1397, 1598, 1712, 1801, 1805
FaqI GGGAC 3 cut(s) 396, 1075, 1267
FatI CATG 9 cut(s) 435, 687, 853, 862, 1393, 1594, 1708, 1797, 1801
FauI CCCGC 1 cut(s) 397
FauNDI CATATG 1 cut(s) 1676
FblI GTMKAC 2 cut(s) 333, 1127
Fnu4HI GCNGC 7 cut(s) 19, 259, 648, 759, 1001, 1004, 1007
FokI GGATG 3 cut(s) 1070, 1157, 1325
FriOI GRGCYC 2 cut(s) 368, 701
Fsp4HI GCNGC 7 cut(s) 19, 259, 648, 759, 1001, 1004, 1007
FspBI CTAG 1 cut(s) 420
GlaI GCGC 2 cut(s) 793, 1579
GluI GCNGC 7 cut(s) 19, 259, 648, 759, 1001, 1004, 1007
GsaI CCCAGC 3 cut(s) 121, 634, 1379
GsuI CTGGAG 3 cut(s) 274, 1241, 1302
HaeIII GGCC 2 cut(s) 1602, 1734
HapII CCGG 5 cut(s) 110, 526, 641, 716, 721
HgaI GACGC 5 cut(s) 113, 152, 721, 922, 1628
HhaI GCGC 2 cut(s) 794, 1580
Hin1I GRCGYC 3 cut(s) 144, 713, 914
Hin1II CATG 9 cut(s) 439, 691, 857, 866, 1397, 1598, 1712, 1801, 1805
Hin6I GCGC 2 cut(s) 792, 1578
HinP1I GCGC 2 cut(s) 792, 1578
HincII GTYRAC 2 cut(s) 334, 1128
HindII GTYRAC 2 cut(s) 334, 1128
HpaII CCGG 5 cut(s) 110, 526, 641, 716, 721
HphI GGTGA 6 cut(s) 646, 721, 826, 953, 1634, 1705
Hpy166II GTNNAC 5 cut(s) 334, 571, 1128, 1470, 1631
Hpy188I TCNGA 8 cut(s) 15, 37, 43, 55, 85, 777, 1123, 1197
Hpy8I GTNNAC 5 cut(s) 334, 571, 1128, 1470, 1631
HpyAV CCTTC 7 cut(s) 198, 322, 862, 916, 1048, 1128, 1762
HpyCH4III ACNGT 6 cut(s) 176, 387, 893, 1326, 1657, 1703
HpyCH4IV ACGT 3 cut(s) 330, 466, 1130
HpyCH4V TGCA 6 cut(s) 439, 832, 1003, 1461, 1652, 1801
HpyF10VI GCNNNNNNNGC 4 cut(s) 1006, 1361, 1875, 1884
HpyF3I CTNAG 5 cut(s) 12, 1038, 1065, 1122, 1230
HpySE526I ACGT 3 cut(s) 330, 466, 1130
Hsp92I GRCGYC 3 cut(s) 144, 713, 914
Hsp92II CATG 9 cut(s) 439, 691, 857, 866, 1397, 1598, 1712, 1801, 1805
HspAI GCGC 2 cut(s) 792, 1578
Kpn2I TCCGGA 1 cut(s) 109
Kzo9I GATC 6 cut(s) 129, 282, 457, 1114, 1551, 1872
LmnI GCTCC 5 cut(s) 112, 371, 696, 1537, 1840
Lsp1109I GCAGC 4 cut(s) 745, 987, 1015, 1018
LweI GCATC 2 cut(s) 945, 1246
MaeI CTAG 1 cut(s) 420
MaeII ACGT 3 cut(s) 330, 466, 1130
MaeIII GTNAC 8 cut(s) 535, 709, 1033, 1402, 1615, 1640, 1715, 1745
MalI GATC 6 cut(s) 131, 284, 459, 1116, 1553, 1874
MboI GATC 6 cut(s) 129, 282, 457, 1114, 1551, 1872
MflI RGATCY 1 cut(s) 1114
MhlI GDGCHC 3 cut(s) 368, 701, 1708
MluCI AATT 6 cut(s) 503, 703, 844, 884, 1207, 1258
MlyI GAGTC 8 cut(s) 32, 498, 650, 973, 1133, 1556, 1784, 1817
MmeI TCCRAC 5 cut(s) 60, 66, 108, 750, 1092
Mph1103I ATGCAT 1 cut(s) 1803
MroI TCCGGA 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 449
MseI TTAA 2 cut(s) 579, 971
MslI CAYNNNNRTG 1 cut(s) 1398
MspA1I CMGCKG 1 cut(s) 1009
MspCI CTTAAG 1 cut(s) 578
MspI CCGG 5 cut(s) 110, 526, 641, 716, 721
MspR9I CCNGG 4 cut(s) 1220, 1371, 1537, 1841
MvaI CCWGG 4 cut(s) 1220, 1371, 1537, 1841
MvnI CGCG 1 cut(s) 21
MwoI GCNNNNNNNGC 4 cut(s) 1006, 1361, 1875, 1884
NcoI CCATGG 2 cut(s) 853, 1594
NdeI CATATG 1 cut(s) 1676
NdeII GATC 6 cut(s) 129, 282, 457, 1114, 1551, 1872
NlaIII CATG 9 cut(s) 439, 691, 857, 866, 1397, 1598, 1712, 1801, 1805
NlaIV GGNNCC 5 cut(s) 7, 367, 698, 1116, 1381
NmeAIII GCCGAG 1 cut(s) 638
NmuCI GTSAC 6 cut(s) 535, 709, 1033, 1402, 1615, 1640
NsiI ATGCAT 1 cut(s) 1803
NspI RCATGY 1 cut(s) 439
PaqCI CACCTGC 1 cut(s) 1681
PceI AGGCCT 1 cut(s) 1734
PcsI WCGNNNNNNNCGW 6 cut(s) 51, 138, 336, 342, 357, 1253
PdmI GAANNNNTTC 1 cut(s) 449
PfeI GAWTC 6 cut(s) 391, 531, 821, 859, 1723, 1759
PfoI TCCNGGA 1 cut(s) 1218
PkrI GCNGC 7 cut(s) 20, 260, 649, 760, 1002, 1005, 1008
Ple19I CGATCG 1 cut(s) 132
PleI GAGTC 8 cut(s) 32, 497, 650, 972, 1132, 1556, 1783, 1817
PpsI GAGTC 8 cut(s) 32, 497, 650, 972, 1132, 1556, 1783, 1817
PshAI GACNNNNGTC 1 cut(s) 716
PsiI TTATAA 1 cut(s) 840
Psp6I CCWGG 4 cut(s) 1218, 1369, 1535, 1839
PspFI CCCAGC 3 cut(s) 117, 630, 1375
PspGI CCWGG 4 cut(s) 1218, 1369, 1535, 1839
PspN4I GGNNCC 5 cut(s) 7, 367, 698, 1116, 1381
PspPI GGNCC 4 cut(s) 25, 718, 723, 1450
PstI CTGCAG 1 cut(s) 1005
PstNI CAGNNNCTG 1 cut(s) 1009
PsuI RGATCY 1 cut(s) 1114
PvuI CGATCG 1 cut(s) 132
PvuII CAGCTG 1 cut(s) 1009
RsaI GTAC 5 cut(s) 173, 178, 524, 572, 1432
RsaNI GTAC 5 cut(s) 172, 177, 523, 571, 1431
RseI CAYNNNNRTG 1 cut(s) 1398
Rsr2I CGGWCCG 1 cut(s) 718
RsrII CGGWCCG 1 cut(s) 718
SalI GTCGAC 2 cut(s) 332, 1126
SaqAI TTAA 2 cut(s) 579, 971
SatI GCNGC 7 cut(s) 19, 259, 648, 759, 1001, 1004, 1007
Sau3AI GATC 6 cut(s) 129, 282, 457, 1114, 1551, 1872
Sau96I GGNCC 4 cut(s) 25, 718, 723, 1450
SchI GAGTC 8 cut(s) 32, 498, 650, 973, 1133, 1556, 1784, 1817
ScrFI CCNGG 4 cut(s) 1220, 1371, 1537, 1841
SduI GDGCHC 3 cut(s) 368, 701, 1708
SfaNI GCATC 2 cut(s) 945, 1246
SfcI CTRYAG 1 cut(s) 1001
SgrDI CGTCGACG 1 cut(s) 332
SinI GGWCC 4 cut(s) 25, 718, 723, 1450
SmiMI CAYNNNNRTG 1 cut(s) 1398
SmlI CTYRAG 5 cut(s) 167, 395, 578, 987, 1736
SmoI CTYRAG 5 cut(s) 167, 395, 578, 987, 1736
Sse9I AATT 6 cut(s) 503, 703, 844, 884, 1207, 1258
SseBI AGGCCT 1 cut(s) 1734
SsiI CCGC 9 cut(s) 19, 204, 210, 258, 369, 404, 429, 647, 650
SspMI CTAG 1 cut(s) 420
StuI AGGCCT 1 cut(s) 1734
StyD4I CCNGG 4 cut(s) 1218, 1369, 1535, 1839
StyI CCWWGG 2 cut(s) 853, 1594
TaaI ACNGT 6 cut(s) 176, 387, 893, 1326, 1657, 1703
TaiI ACGT 3 cut(s) 333, 469, 1133
TaqI TCGA 7 cut(s) 141, 333, 750, 888, 1127, 1247, 1871
TaqII GACCGA 1 cut(s) 1451
TasI AATT 6 cut(s) 503, 703, 844, 884, 1207, 1258
TauI GCSGC 3 cut(s) 21, 261, 650
TfiI GAWTC 6 cut(s) 391, 531, 821, 859, 1723, 1759
Tru1I TTAA 2 cut(s) 579, 971
Tru9I TTAA 2 cut(s) 579, 971
TscAI CASTG 9 cut(s) 392, 898, 1169, 1271, 1477, 1624, 1662, 1675, 1708
TseFI GTSAC 6 cut(s) 535, 709, 1033, 1402, 1615, 1640
TseI GCWGC 4 cut(s) 758, 1000, 1003, 1006
Tsp45I GTSAC 6 cut(s) 535, 709, 1033, 1402, 1615, 1640
TspDTI ATGAA 4 cut(s) 851, 1725, 1786, 1874
TspGWI ACGGA 3 cut(s) 205, 554, 602
TspRI CASTG 9 cut(s) 392, 898, 1169, 1271, 1477, 1624, 1662, 1675, 1708
Vha464I CTTAAG 1 cut(s) 578
VpaK11BI GGWCC 4 cut(s) 25, 718, 723, 1450
XagI CCTNNNNNAGG 1 cut(s) 1345
XapI RAATTY 4 cut(s) 503, 844, 884, 1258
XceI RCATGY 1 cut(s) 439
XcmI CCANNNNNNNNNTGG 1 cut(s) 860
XmiI GTMKAC 2 cut(s) 333, 1127
XmnI GAANNNNTTC 1 cut(s) 449
XspI CTAG 1 cut(s) 420
Zsp2I ATGCAT 1 cut(s) 1803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.