RLG00000014677

VID27 cytoplasmic protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0013857
Physical Location & Seq
Forward (+)
56117115 .. 56120408
3294 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014677

Sequence Viewer

Length: 1905 bp
ATGGGAACCTCCCAGAGCCGCGAGGACTACATCTCCGACTCCGACGACTACAAAGAGGAGGAGGAAGAAGAAGAACGATCCGACGATACAGAAGAGTACCAAGACGCCCGAGAGAAACAGCCCACCCCAATCGGCGATCTCGACGCCAAGCTCAAAGCCTTGAAGCTCAAGTACGGAACTCCTTCCTCTTCCTCCTCCACCTCCTCGTCCGCCGTCTCACATAACGCCGTCAAGCTCTACCTCCACATCGGCGGTAACGCTCCCAACGCCAAGTGGATCGTCTCCAACAAGCTCACCTCCTTCTCCTTCGTCAAGACCACCAACGTCGACGGCGACAGCGACGACGACGACGACTACGAGGGATCCTCGTCGGACGGTAAAGGACAGTGGATTCTCAAGGTTGGGGGCAAGGTCCGAGCTAGGGTTTCCACCGACATGCAATTGAAGATGTTCGGCGATCAGCGACGTGTGGATTTCGTGTCTAGAGGCGTCTGGGCTCTGAAATTCTTCACCGACGAGCAGTACCGGAGATTCGTCACCGAATTTCAGGACTGCTTGTTTGAGAACGTGTACGGGCTTAAGGCGACGGAGGAGAACAAGGTGAAGATTTACGGCAAGGAGTTTTTGGGGTGGGTGAAGCCGGAGGCAGCCGACGACTCGGCGTGGGAGTATGCCGACGATTATGACATGGCCGCCAGGAGCCCCAATTCGGTGACGCCGGTCCGCTCCAACCAGCAATTGATGGATGAGTTTGAGGAGGCTGCGAATGGAGGTGTTCAGAGCTTGACGCTTGGTGCATTGGATAATAGTTTCTTGGTGAATGATTCTGGTGTTCAGGTGTATAGGAATTTCAGAGATGGGATTCATGGGAAGGGTGTGGTTGCGAAATTCGACAGTGGGGGTGGTTCGAAATCGACCCCGAAGAAGGCTCTGCTTATGAGGGGGGAGACTAATATGATGCTTATGAGTCCACTCAAGGAAGGGAAGCCTCAGGCAAATGGGCTTCAGCAGCTGGACATTGAGACTGGGAAGATTGTCACGGAATGGAAGTTTGAGAAGGATGGAACAGAGATTACAATGAGGGATATCACCAATGACACTAAGGAGTCGCAATTGGATCCTTCTGAGTCGACATTTCTGGGTTTGGATGATAACAGGCTTTGCCAGTGGGATATGCGTGAACGCAGAGGAATGGTTCAGAACATTGCTAGTTTGAATTCGCCGGTGCTGCAGTGGTCTCAGGGGCATCAGTTTTCTCGAGGGACCAATTTTCAGTGCTTTGCTACTACTGGAGATGGGTCTATTGTTGTTGGGTCTCTGGATGGGAAGATACGGTTGTATTCAAAGACCTCTATGAGGCAGGCAAAGACTGCTTTCCCAGGGCTGGGTTCCCCCATTACTCATGTTGATGTGACTTATGATGGGAAGTGGGTGTTGGGTACAACTGACACTTACTTGGTCCTTATATGCACTCTCTTCACTGACAAAGATGGAAAGACCAAGACTGGGTTTAGTGGTAGAATGGGAAACAAGATACCAGCTCCCAGGTTGTTGAAGCTGATCCCTCTTGACTCACATTTGGCTGGTGCAGACAATAAGTTTCATGGAGGCCACTTCTCATGGGTCACTGAGAGTGGTAAACAAGAGCGTCACCTTGTTGCAACAGTGGGAAAGTTCAGTGTGATATGGGATTTCCAGCAGGTGAAGAATAGTTCCCATGAATGTTACAGGAATCAGCAAGGCCTCAAGAGTTGTTACTGCTACAAGATCCTTTTGAAGGACGAGTCCATTGTGGAGAGCCGTTTCATGCACGATAAGTATGCTGTCAGTGACTCACCTGAAGCTCCTCTGGTGGTGGCAACCCCGATGAAAGTCAGCTCGATCAGTCTCTCTGGCAAAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VID27

Protein Analysis

635

Amino Acids

70.64

Weight (kDa)

5.58

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7135 PF23581 36 - 205 4.6e-73 Domain of unknown function (DUF7135)
VID27 PF08553 262 - 577 7.5e-46 VID27 C-terminal WD40-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013857)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19240
fragaria_vesca FvH4_2g06100
malus_domestica MD05G1080700.v1.1
prunus_persica Prupe.8G124300_v2.0.a1
pyrus_communis pycom05g07340
rosa_chinensis RchiOBHm_Chr6g0257121
rosa_laevigata RLG00000014677
rosa_multiflora Rmu_co8449469.1_g000001 Rmu_sc0000659.1_g000002
rosa_roxburghii Rroxscaffold_7G00208510
rosa_rugosa Rorug05G0575200
rosa_samantha Rh2BG009300 Rh6AG093100 Rh6BG084000 Rh6CG080400 Rh6DG075800
rosa_wichuraiana Rw6G008010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1690
Acc36I ACCTGC 1 cut(s) 1690
AccBSI CCGCTC 1 cut(s) 726
AccI GTMKAC 2 cut(s) 327, 1130
AccII CGCG 1 cut(s) 21
AciI CCGC 5 cut(s) 19, 210, 252, 693, 724
AclWI GGATC 8 cut(s) 72, 284, 357, 370, 1112, 1125, 1555, 1762
AcoI YGGCCR 1 cut(s) 690
AcsI RAATTY 5 cut(s) 503, 542, 847, 887, 1216
AcuI CTGAAG 2 cut(s) 989, 1860
AcyI GRCGYC 4 cut(s) 105, 144, 489, 716
AfaI GTAC 5 cut(s) 98, 173, 524, 572, 1441
AfiI CCNNNNNNNGG 8 cut(s) 421, 709, 925, 1356, 1384, 1385, 1506, 1777
AflII CTTAAG 1 cut(s) 578
AflIII ACRYGT 2 cut(s) 466, 567
AgsI TTSAA 6 cut(s) 163, 445, 1216, 1344, 1555, 1777
AjiI CACGTC 1 cut(s) 467
AjnI CCWGG 3 cut(s) 695, 1378, 1544
AjuI GAANNNNNNNTTGG 2 cut(s) 1418, 1450
Alw26I GTCTC 7 cut(s) 220, 286, 941, 1016, 1242, 1320, 1892
AlwI GGATC 8 cut(s) 72, 284, 357, 370, 1112, 1125, 1555, 1762
AlwNI CAGNNNCTG 1 cut(s) 1012
Ama87I CYCGRG 2 cut(s) 108, 1257
AoxI GGCC 3 cut(s) 690, 1609, 1741
ApeKI GCWGC 4 cut(s) 647, 761, 1009, 1228
ApoI RAATTY 5 cut(s) 503, 542, 847, 887, 1216
ArsI GACNNNNNNTTYG 2 cut(s) 542, 574
Asp700I GAANNNNTTC 3 cut(s) 181, 449, 506
AspS9I GGNCC 4 cut(s) 412, 721, 1263, 1459
AsuII TTCGAA 1 cut(s) 908
AvaI CYCGRG 2 cut(s) 108, 1257
AvaII GGWCC 4 cut(s) 412, 721, 1263, 1459
AxyI CCTNAGG 1 cut(s) 990
BaeI ACNNNNGTAYC 2 cut(s) 1322, 1355
BamHI GGATCC 2 cut(s) 362, 1117
BanII GRGCYC 2 cut(s) 499, 704
BarI GAAGNNNNNNTAC 2 cut(s) 155, 187
BbvI GCAGC 4 cut(s) 659, 748, 1021, 1215
BccI CCATC 7 cut(s) 736, 851, 1055, 1289, 1316, 1415, 1484
BceAI ACGGC 5 cut(s) 197, 212, 346, 628, 1785
BcgI CGANNNNNNTGC 2 cut(s) 1802, 1836
BciT130I CCWGG 3 cut(s) 697, 1380, 1546
BcoDI GTCTC 7 cut(s) 220, 286, 941, 1016, 1242, 1320, 1892
BfaI CTAG 3 cut(s) 420, 483, 1209
BfmI CTRYAG 1 cut(s) 1229
BfrI CTTAAG 1 cut(s) 578
BfuAI ACCTGC 1 cut(s) 1690
BisI GCNGC 6 cut(s) 19, 648, 693, 762, 1010, 1229
BlsI GCNGC 6 cut(s) 20, 649, 694, 763, 1011, 1230
Bme1390I CCNGG 3 cut(s) 697, 1380, 1546
Bme18I GGWCC 4 cut(s) 412, 721, 1263, 1459
BmeT110I CYCGRG 2 cut(s) 108, 1257
BmgBI CACGTC 1 cut(s) 467
BmgT120I GGNCC 4 cut(s) 412, 721, 1263, 1459
BmiI GGNNCC 6 cut(s) 7, 364, 701, 1119, 1264, 1390
BmrFI CCNGG 3 cut(s) 697, 1380, 1546
BmrI ACTGGG 2 cut(s) 1035, 1515
BmsI GCATC 2 cut(s) 948, 1255
BmuI ACTGGG 2 cut(s) 1035, 1515
BoxI GACNNNNGTC 1 cut(s) 719
BplI GAGNNNNNCTC 2 cut(s) 350, 382
BpmI CTGGAG 1 cut(s) 1311
Bpu14I TTCGAA 1 cut(s) 908
BpuEI CTTGAG 4 cut(s) 152, 380, 959, 1730
BsaHI GRCGYC 4 cut(s) 105, 144, 489, 716
BsaI GGTCTC 2 cut(s) 1242, 1320
BsaJI CCNNGG 3 cut(s) 1378, 1379, 1544
BsaWI WCCGGW 1 cut(s) 525
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bsc4I CCNNNNNNNGG 8 cut(s) 421, 709, 925, 1356, 1384, 1385, 1506, 1777
Bse118I RCCGGY 2 cut(s) 718, 1222
Bse1I ACTGG 4 cut(s) 1030, 1165, 1294, 1510
Bse21I CCTNAGG 1 cut(s) 990
Bse3DI GCAATG 1 cut(s) 1203
BseBI CCWGG 3 cut(s) 697, 1380, 1546
BseDI CCNNGG 3 cut(s) 1378, 1379, 1544
BseGI GGATG 4 cut(s) 751, 1066, 1153, 1327
BseLI CCNNNNNNNGG 8 cut(s) 421, 709, 925, 1356, 1384, 1385, 1506, 1777
BseMI GCAATG 1 cut(s) 1203
BseMII CTCAG 4 cut(s) 1004, 1116, 1253, 1620
BseNI ACTGG 4 cut(s) 1030, 1165, 1294, 1510
BseRI GAGGAG 7 cut(s) 71, 74, 184, 193, 605, 770, 1836
BseXI GCAGC 4 cut(s) 659, 748, 1021, 1215
BseYI CCCAGC 1 cut(s) 1384
BsgI GTGCAG 1 cut(s) 1608
Bsh1236I CGCG 1 cut(s) 21
BshFI GGCC 3 cut(s) 692, 1611, 1743
BsiHKCI CYCGRG 2 cut(s) 108, 1257
BsiSI CCGG 4 cut(s) 526, 641, 719, 1223
BslFI GGGAC 1 cut(s) 1276
BslI CCNNNNNNNGG 8 cut(s) 421, 709, 925, 1356, 1384, 1385, 1506, 1777
BsmAI GTCTC 7 cut(s) 220, 286, 941, 1016, 1242, 1320, 1892
BsmBI CGTCTC 2 cut(s) 220, 286
BsmFI GGGAC 1 cut(s) 1276
BsnI GGCC 3 cut(s) 692, 1611, 1743
Bso31I GGTCTC 2 cut(s) 1242, 1320
BsoBI CYCGRG 2 cut(s) 108, 1257
Bsp119I TTCGAA 1 cut(s) 908
Bsp1286I GDGCHC 2 cut(s) 499, 704
Bsp143I GATC 9 cut(s) 77, 136, 276, 362, 457, 1117, 1560, 1767, 1881
BspACI CCGC 5 cut(s) 19, 210, 252, 693, 724
BspANI GGCC 3 cut(s) 692, 1611, 1743
BspCNI CTCAG 4 cut(s) 1003, 1117, 1252, 1621
BspFNI CGCG 1 cut(s) 21
BspLI GGNNCC 6 cut(s) 7, 364, 701, 1119, 1264, 1390
BspMAI CTGCAG 1 cut(s) 1233
BspMI ACCTGC 1 cut(s) 1690
BspPI GGATC 8 cut(s) 72, 284, 357, 370, 1112, 1125, 1555, 1762
BspT104I TTCGAA 1 cut(s) 908
BspTI CTTAAG 1 cut(s) 578
BspTNI GGTCTC 2 cut(s) 1242, 1320
BsrBI CCGCTC 1 cut(s) 726
BsrDI GCAATG 1 cut(s) 1203
BsrFI RCCGGY 2 cut(s) 718, 1222
BsrI ACTGG 4 cut(s) 1030, 1165, 1294, 1510
BssAI RCCGGY 2 cut(s) 718, 1222
BssECI CCNNGG 3 cut(s) 1378, 1379, 1544
BssMI GATC 9 cut(s) 77, 136, 276, 362, 457, 1117, 1560, 1767, 1881
BssNI GRCGYC 4 cut(s) 105, 144, 489, 716
Bst2UI CCWGG 3 cut(s) 697, 1380, 1546
Bst4CI ACNGT 5 cut(s) 377, 387, 896, 1335, 1666
Bst6I CTCTTC 3 cut(s) 87, 193, 1481
BstACI GRCGYC 4 cut(s) 105, 144, 489, 716
BstAFI CTTAAG 1 cut(s) 578
BstAPI GCANNNNNTGC 1 cut(s) 1370
BstBI TTCGAA 1 cut(s) 908
BstC8I GCNNGC 1 cut(s) 1362
BstDEI CTNAG 5 cut(s) 990, 1101, 1125, 1239, 1629
BstENI CCTNNNNNAGG 2 cut(s) 1354, 1775
BstF5I GGATG 4 cut(s) 751, 1066, 1153, 1327
BstFNI CGCG 1 cut(s) 21
BstKTI GATC 9 cut(s) 80, 139, 279, 365, 460, 1120, 1563, 1770, 1884
BstMAI GTCTC 7 cut(s) 220, 286, 941, 1016, 1242, 1320, 1892
BstMBI GATC 9 cut(s) 77, 136, 276, 362, 457, 1117, 1560, 1767, 1881
BstMWI GCNNNNNNNGC 4 cut(s) 266, 1009, 1228, 1370
BstNI CCWGG 3 cut(s) 697, 1380, 1546
BstNSI RCATGY 1 cut(s) 439
BstPAI GACNNNNGTC 1 cut(s) 719
BstSCI CCNGG 3 cut(s) 695, 1378, 1544
BstSFI CTRYAG 1 cut(s) 1229
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 4 cut(s) 659, 748, 1021, 1215
BstX2I RGATCY 3 cut(s) 362, 1117, 1767
BstYI RGATCY 3 cut(s) 362, 1117, 1767
Bsu36I CCTNAGG 1 cut(s) 990
BsuRI GGCC 3 cut(s) 692, 1611, 1743
BtrI CACGTC 1 cut(s) 467
BtsCI GGATG 4 cut(s) 751, 1066, 1153, 1327
BtsI GCAGTG 1 cut(s) 1238
BveI ACCTGC 1 cut(s) 1690
Cac8I GCNNGC 1 cut(s) 1362
CaiI CAGNNNCTG 1 cut(s) 1012
Cfr10I RCCGGY 2 cut(s) 718, 1222
Cfr13I GGNCC 4 cut(s) 412, 721, 1263, 1459
CpoI CGGWCCG 1 cut(s) 721
CseI GACGC 6 cut(s) 113, 152, 478, 724, 796, 1637
Csp6I GTAC 5 cut(s) 97, 172, 523, 571, 1440
CspI CGGWCCG 1 cut(s) 721
CviAII CATG 8 cut(s) 436, 688, 866, 1403, 1604, 1620, 1718, 1807
CviQI GTAC 5 cut(s) 97, 172, 523, 571, 1440
DdeI CTNAG 5 cut(s) 990, 1101, 1125, 1239, 1629
DpnI GATC 9 cut(s) 79, 138, 278, 364, 459, 1119, 1562, 1769, 1883
DpnII GATC 9 cut(s) 77, 136, 276, 362, 457, 1117, 1560, 1767, 1881
EaeI YGGCCR 1 cut(s) 690
Eam1104I CTCTTC 3 cut(s) 87, 193, 1481
EarI CTCTTC 3 cut(s) 87, 193, 1481
EciI GGCGGA 1 cut(s) 199
Eco147I AGGCCT 1 cut(s) 1743
Eco24I GRGCYC 2 cut(s) 499, 704
Eco31I GGTCTC 2 cut(s) 1242, 1320
Eco32I GATATC 1 cut(s) 1087
Eco47I GGWCC 4 cut(s) 412, 721, 1263, 1459
Eco57I CTGAAG 2 cut(s) 989, 1860
Eco81I CCTNAGG 1 cut(s) 990
Eco88I CYCGRG 2 cut(s) 108, 1257
EcoNI CCTNNNNNAGG 2 cut(s) 1354, 1775
EcoRI GAATTC 1 cut(s) 1216
EcoRII CCWGG 3 cut(s) 695, 1378, 1544
EcoRV GATATC 1 cut(s) 1087
EcoT38I GRGCYC 2 cut(s) 499, 704
Esp3I CGTCTC 2 cut(s) 220, 286
FaeI CATG 8 cut(s) 439, 691, 869, 1406, 1607, 1623, 1721, 1810
FaqI GGGAC 1 cut(s) 1276
FatI CATG 8 cut(s) 435, 687, 865, 1402, 1603, 1619, 1717, 1806
FblI GTMKAC 2 cut(s) 327, 1130
Fnu4HI GCNGC 6 cut(s) 19, 648, 693, 762, 1010, 1229
FokI GGATG 4 cut(s) 758, 1073, 1160, 1334
FriOI GRGCYC 2 cut(s) 499, 704
Fsp4HI GCNGC 6 cut(s) 19, 648, 693, 762, 1010, 1229
FspBI CTAG 3 cut(s) 420, 483, 1209
GluI GCNGC 6 cut(s) 19, 648, 693, 762, 1010, 1229
GsaI CCCAGC 1 cut(s) 1388
GsuI CTGGAG 1 cut(s) 1311
HaeIII GGCC 3 cut(s) 692, 1611, 1743
HapII CCGG 4 cut(s) 526, 641, 719, 1223
HgaI GACGC 6 cut(s) 113, 152, 478, 724, 796, 1637
Hin1I GRCGYC 4 cut(s) 105, 144, 489, 716
Hin1II CATG 8 cut(s) 439, 691, 869, 1406, 1607, 1623, 1721, 1810
HincII GTYRAC 2 cut(s) 328, 1131
HindII GTYRAC 2 cut(s) 328, 1131
HpaII CCGG 4 cut(s) 526, 641, 719, 1223
Hpy166II GTNNAC 6 cut(s) 328, 571, 971, 1131, 1181, 1640
Hpy188III TCNNGA 8 cut(s) 140, 313, 483, 548, 1257, 1319, 1568, 1747
Hpy8I GTNNAC 6 cut(s) 328, 571, 971, 1131, 1181, 1640
HpyAV CCTTC 9 cut(s) 192, 310, 316, 865, 919, 974, 1051, 1131, 1771
HpyCH4III ACNGT 5 cut(s) 377, 387, 896, 1335, 1666
HpyCH4IV ACGT 3 cut(s) 324, 466, 567
HpyCH4V TGCA 7 cut(s) 439, 797, 1231, 1470, 1589, 1661, 1810
HpyF10VI GCNNNNNNNGC 4 cut(s) 266, 1009, 1228, 1370
HpyF3I CTNAG 5 cut(s) 990, 1101, 1125, 1239, 1629
HpySE526I ACGT 3 cut(s) 324, 466, 567
Hsp92I GRCGYC 4 cut(s) 105, 144, 489, 716
Hsp92II CATG 8 cut(s) 439, 691, 869, 1406, 1607, 1623, 1721, 1810
Kzo9I GATC 9 cut(s) 77, 136, 276, 362, 457, 1117, 1560, 1767, 1881
LmnI GCTCC 5 cut(s) 265, 699, 731, 1546, 1849
Lsp1109I GCAGC 4 cut(s) 659, 748, 1021, 1215
LweI GCATC 2 cut(s) 948, 1255
MaeI CTAG 3 cut(s) 420, 483, 1209
MaeII ACGT 3 cut(s) 324, 466, 567
MalI GATC 9 cut(s) 79, 138, 278, 364, 459, 1119, 1562, 1769, 1883
MbiI CCGCTC 1 cut(s) 726
MboI GATC 9 cut(s) 77, 136, 276, 362, 457, 1117, 1560, 1767, 1881
MfeI CAATTG 3 cut(s) 440, 737, 1112
MflI RGATCY 3 cut(s) 362, 1117, 1767
MhlI GDGCHC 2 cut(s) 499, 704
MlyI GAGTC 8 cut(s) 32, 650, 976, 1115, 1136, 1565, 1793, 1826
MmeI TCCRAC 6 cut(s) 60, 66, 105, 309, 351, 753
MroXI GAANNNNTTC 3 cut(s) 181, 449, 506
MseI TTAA 1 cut(s) 579
MslI CAYNNNNRTG 2 cut(s) 434, 1407
MspA1I CMGCKG 1 cut(s) 1012
MspCI CTTAAG 1 cut(s) 578
MspI CCGG 4 cut(s) 526, 641, 719, 1223
MspR9I CCNGG 3 cut(s) 697, 1380, 1546
MunI CAATTG 3 cut(s) 440, 737, 1112
MvaI CCWGG 3 cut(s) 697, 1380, 1546
MvnI CGCG 1 cut(s) 21
MwoI GCNNNNNNNGC 4 cut(s) 266, 1009, 1228, 1370
NdeII GATC 9 cut(s) 77, 136, 276, 362, 457, 1117, 1560, 1767, 1881
NlaIII CATG 8 cut(s) 439, 691, 869, 1406, 1607, 1623, 1721, 1810
NlaIV GGNNCC 6 cut(s) 7, 364, 701, 1119, 1264, 1390
NmeAIII GCCGAG 1 cut(s) 638
NmuCI GTSAC 7 cut(s) 535, 712, 1036, 1411, 1624, 1649, 1829
NspI RCATGY 1 cut(s) 439
NspV TTCGAA 1 cut(s) 908
PaeR7I CTCGAG 1 cut(s) 1257
PaqCI CACCTGC 1 cut(s) 1690
PasI CCCWGGG 1 cut(s) 1379
PceI AGGCCT 1 cut(s) 1743
PcsI WCGNNNNNNNCGW 5 cut(s) 138, 330, 336, 348, 354
PdmI GAANNNNTTC 3 cut(s) 181, 449, 506
PfeI GAWTC 5 cut(s) 391, 531, 824, 862, 1732
PkrI GCNGC 6 cut(s) 20, 649, 694, 763, 1011, 1230
PleI GAGTC 8 cut(s) 32, 650, 975, 1114, 1135, 1565, 1792, 1826
PpsI GAGTC 8 cut(s) 32, 650, 975, 1114, 1135, 1565, 1792, 1826
PshAI GACNNNNGTC 1 cut(s) 719
Psp6I CCWGG 3 cut(s) 695, 1378, 1544
PspFI CCCAGC 1 cut(s) 1384
PspGI CCWGG 3 cut(s) 695, 1378, 1544
PspN4I GGNNCC 6 cut(s) 7, 364, 701, 1119, 1264, 1390
PspPI GGNCC 4 cut(s) 412, 721, 1263, 1459
PsrI GAACNNNNNNTAC 2 cut(s) 1057, 1089
PstI CTGCAG 1 cut(s) 1233
PstNI CAGNNNCTG 1 cut(s) 1012
PsuI RGATCY 3 cut(s) 362, 1117, 1767
PvuII CAGCTG 1 cut(s) 1012
RsaI GTAC 5 cut(s) 98, 173, 524, 572, 1441
RsaNI GTAC 5 cut(s) 97, 172, 523, 571, 1440
RseI CAYNNNNRTG 2 cut(s) 434, 1407
Rsr2I CGGWCCG 1 cut(s) 721
RsrII CGGWCCG 1 cut(s) 721
SalI GTCGAC 2 cut(s) 326, 1129
SaqAI TTAA 1 cut(s) 579
SatI GCNGC 6 cut(s) 19, 648, 693, 762, 1010, 1229
Sau3AI GATC 9 cut(s) 77, 136, 276, 362, 457, 1117, 1560, 1767, 1881
Sau96I GGNCC 4 cut(s) 412, 721, 1263, 1459
SchI GAGTC 8 cut(s) 32, 650, 976, 1115, 1136, 1565, 1793, 1826
ScrFI CCNGG 3 cut(s) 697, 1380, 1546
SduI GDGCHC 2 cut(s) 499, 704
SfaNI GCATC 2 cut(s) 948, 1255
SfcI CTRYAG 1 cut(s) 1229
Sfr274I CTCGAG 1 cut(s) 1257
SfuI TTCGAA 1 cut(s) 908
SgrAI CRCCGGYG 1 cut(s) 1222
SgrDI CGTCGACG 1 cut(s) 326
SinI GGWCC 4 cut(s) 412, 721, 1263, 1459
SlaI CTCGAG 1 cut(s) 1257
SmiMI CAYNNNNRTG 2 cut(s) 434, 1407
SmlI CTYRAG 6 cut(s) 167, 395, 578, 974, 1257, 1745
SmoI CTYRAG 6 cut(s) 167, 395, 578, 974, 1257, 1745
SseBI AGGCCT 1 cut(s) 1743
SsiI CCGC 5 cut(s) 19, 210, 252, 693, 724
SspMI CTAG 3 cut(s) 420, 483, 1209
StuI AGGCCT 1 cut(s) 1743
StyD4I CCNGG 3 cut(s) 695, 1378, 1544
TaaI ACNGT 5 cut(s) 377, 387, 896, 1335, 1666
TaiI ACGT 3 cut(s) 327, 469, 570
TaqI TCGA 8 cut(s) 141, 327, 891, 908, 914, 1130, 1258, 1880
TauI GCSGC 2 cut(s) 21, 695
TfiI GAWTC 5 cut(s) 391, 531, 824, 862, 1732
Tru1I TTAA 1 cut(s) 579
Tru9I TTAA 1 cut(s) 579
TseFI GTSAC 7 cut(s) 535, 712, 1036, 1411, 1624, 1649, 1829
TseI GCWGC 4 cut(s) 647, 761, 1009, 1228
Tsp45I GTSAC 7 cut(s) 535, 712, 1036, 1411, 1624, 1649, 1829
TspDTI ATGAA 5 cut(s) 854, 1592, 1734, 1795, 1883
TspGWI ACGGA 3 cut(s) 189, 602, 1055
Vha464I CTTAAG 1 cut(s) 578
VpaK11BI GGWCC 4 cut(s) 412, 721, 1263, 1459
XagI CCTNNNNNAGG 2 cut(s) 1354, 1775
XapI RAATTY 5 cut(s) 503, 542, 847, 887, 1216
XbaI TCTAGA 1 cut(s) 482
XceI RCATGY 1 cut(s) 439
XhoI CTCGAG 1 cut(s) 1257
XmiI GTMKAC 2 cut(s) 327, 1130
XmnI GAANNNNTTC 3 cut(s) 181, 449, 506
XspI CTAG 3 cut(s) 420, 483, 1209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.