Rw6G008010

VID27 cytoplasmic protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0013857
Physical Location & Seq
Reverse (-)
13629981 .. 13633186
3206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G008010.1

Sequence Viewer

Length: 1836 bp
ATGGGAACCTCCCAGAGCCGCGAGGACTACATCTCCGACTCCGACGACTACAAAGAGGAGGAGGAGGAGGAGAAGAACGATCCGACGATACAGAAGAGTTCCAAGACGCTCGAGAGAACCAGCCCACCCCAATCGCTCAAGTACGGAACTCCTTCCTCTTCCTCCTCCACCCCCTCGTCCGCCGTCTCACATAACGCCGTCAAGCTCTACCTCCACATCGGCGGCAACGCTCCCAACGCCAAGTGGATCGTCTCCAACAAGCTCACCTCCTTCTCCTTCGTCAAGACCTCCAACGTCGACGGCGACAGCGACGACGACGACGACGACTACGAGGGATCCTCGTCGGATGGTAAAGGACAGTGGATTCTCAAGGTTGGTGGCAAGGTCCGAGCTAGGGTTTCCACCGACATGCAATTGAAGATGTTCGGCGATCAGCGACGTGTGGATTTCCAGTACCGGAGATTCGTCACCGAATTTCAGGACTGCTTGTTTGAGAACGTGTACGGGCTTAAGGCGACGGAGGAGAACAAGGTCAAGATTTACGGTAAGGAGTTTTTGGGGTGGGTGAAGCCGGAGGCGGCGGATGACTCGGCGTGGGAGTATGCTGACGATTATGACATGGCCGCCGGGAGCCCCAATTCGGTGACGCCGGTCCGCTCCAACCAGCAATTGATGGAGGAGTTTGAGGAGGCTGCGAATGGAGGTGTTCAGAGCTTGACGCTTGGTGCATTGGATAATAGTTTCTTGGTGAATGATTCTGGTGTTCAGGTGTATAGGAATTTCAGAGATGGGATTCATGGGAAGGGTGTGGTTGCGAAATTCGACAGTGGGGGTGGTTCGAAATCGACACCGAAGAAGGCTCTGCTTATTAGGGGGGAGACTAATATGATGCTTATGAGTCCACTGAAGGAGGGAAAGCCTCAGGCAAATGGGCTTCAGCAGTTGGACATTGAGACTGGGAAGATTGTCACGGAATGGAAGTTTGAGAAGGATGGGACAGAGATTACAATGAGGGATATCACCAATGACACTAAGGAGTCGCAATTGGATCCTTCTGAGTCGACATTTCTGGGTTTGGATGATAACAGGCTTTGCCAGTGGGATATGCGTGAACGCAGAGGAATGGTTCAGAACATTGCTAGTTTGAATTCGCCAGTGCTGCAGTGGTCTCAGGGGCATCAGTTTTCTCGAGGGACGAATTTTCAGTGCTTTGCTACTACTGGAGATGGGTCTATTGTTGTTGGGTCTCTGGATGGGAAGATACGGTTGTATTCCAAGACCTCTATGAGGCAGGCAAAGACTGCTTTCCCAGGGCTGGGTTCCCCCATTACTCATGTTGATGTGACTTATGATGGGAAGTGGGTGTTGGGTACAACTGACACTTACTTGGTCCTTATATGCACTCTCTTCACTGACAAAGATGGAAAGACCAAGACTGGGTTTAGTGGTAGAATGGGAAACAAGATACCAGCTCCCAGGTTGTTGAAGCTGATCCCTCTTGACTCACATTTGGCTGGTGCAGACAATAAGTTTCATGGAGGCCACTTCTCATGGGTCACTGAAAGTGGTAAACAAGAGCGTCACCTTGTTGCAACAGTGGGAAAGTTCAGTGTGATATGGGATTTCCAGCAGGTGAAGAATAGTGCCCATGAATGTTACAGGAATCAGCAAGGCCTCAAGAGTTGTTACTGCTACAAGATCCTTTTGAAGGACGAGTCCATTGTGGAGAGCCGTTTCATGCACGATAAGTATGCTGTCAGTGACTCCCCTGAAGCTCCTCTGGTGGTGGCAACCCCGATGAAAGTCAGCTCGATCAGTCTCTCTGGCAAAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VID27

Protein Analysis

611

Amino Acids

67.77

Weight (kDa)

5.79

Isoelectric Point (pI)

39.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7135 PF23581 44 - 182 3.2e-49 Domain of unknown function (DUF7135)
VID27 PF08553 239 - 554 1.3e-45 VID27 C-terminal WD40-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013857)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19240
fragaria_vesca FvH4_2g06100
malus_domestica MD05G1080700.v1.1
prunus_persica Prupe.8G124300_v2.0.a1
pyrus_communis pycom05g07340
rosa_chinensis RchiOBHm_Chr6g0257121
rosa_laevigata RLG00000014677
rosa_multiflora Rmu_co8449469.1_g000001 Rmu_sc0000659.1_g000002
rosa_roxburghii Rroxscaffold_7G00208510
rosa_rugosa Rorug05G0575200
rosa_samantha Rh2BG009300 Rh6AG093100 Rh6BG084000 Rh6CG080400 Rh6DG075800
rosa_wichuraiana Rw6G008010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1621
Acc36I ACCTGC 1 cut(s) 1621
AccBSI CCGCTC 1 cut(s) 657
AccI GTMKAC 2 cut(s) 297, 1061
AccII CGCG 1 cut(s) 21
AciI CCGC 7 cut(s) 19, 180, 222, 578, 581, 624, 655
AclWI GGATC 8 cut(s) 74, 254, 330, 343, 1043, 1056, 1486, 1693
AcoI YGGCCR 1 cut(s) 621
AcsI RAATTY 5 cut(s) 473, 778, 818, 1147, 1198
AcuI CTGAAG 3 cut(s) 920, 926, 1791
AcyI GRCGYC 1 cut(s) 647
AfaI GTAC 4 cut(s) 143, 455, 503, 1372
AfiI CCNNNNNNNGG 7 cut(s) 394, 640, 1287, 1315, 1316, 1437, 1708
AflII CTTAAG 1 cut(s) 509
AflIII ACRYGT 2 cut(s) 439, 498
AgsI TTSAA 4 cut(s) 418, 1147, 1486, 1708
AjiI CACGTC 1 cut(s) 440
AjnI CCWGG 2 cut(s) 1309, 1475
AjuI GAANNNNNNNTTGG 2 cut(s) 1349, 1381
AluBI AGCT 8 cut(s) 205, 262, 392, 714, 1472, 1489, 1775, 1809
AluI AGCT 8 cut(s) 205, 262, 392, 714, 1472, 1489, 1775, 1809
Alw26I GTCTC 7 cut(s) 190, 256, 872, 947, 1173, 1251, 1823
AlwI GGATC 8 cut(s) 74, 254, 330, 343, 1043, 1056, 1486, 1693
Ama87I CYCGRG 2 cut(s) 110, 1188
AoxI GGCC 3 cut(s) 621, 1540, 1672
ApeKI GCWGC 2 cut(s) 692, 1159
ApoI RAATTY 5 cut(s) 473, 778, 818, 1147, 1198
ArsI GACNNNNNNTTYG 2 cut(s) 473, 505
Asp700I GAANNNNTTC 2 cut(s) 151, 422
AspS9I GGNCC 3 cut(s) 385, 652, 1390
AsuC2I CCSGG 1 cut(s) 628
AsuHPI GGTGA 8 cut(s) 256, 460, 577, 655, 760, 1012, 1574, 1645
AsuII TTCGAA 1 cut(s) 839
AvaI CYCGRG 2 cut(s) 110, 1188
AvaII GGWCC 3 cut(s) 385, 652, 1390
AxyI CCTNAGG 1 cut(s) 921
BaeGI GKGCMC 1 cut(s) 1648
BaeI ACNNNNGTAYC 2 cut(s) 1253, 1286
BamHI GGATCC 2 cut(s) 335, 1048
BanII GRGCYC 1 cut(s) 635
BbvI GCAGC 2 cut(s) 679, 1146
BccI CCATC 8 cut(s) 341, 667, 782, 986, 1220, 1247, 1346, 1415
BceAI ACGGC 4 cut(s) 167, 182, 316, 1716
BcgI CGANNNNNNTGC 2 cut(s) 1733, 1767
BciT130I CCWGG 2 cut(s) 1311, 1477
BcnI CCSGG 1 cut(s) 628
BcoDI GTCTC 7 cut(s) 190, 256, 872, 947, 1173, 1251, 1823
BfaI CTAG 2 cut(s) 393, 1140
BfmI CTRYAG 1 cut(s) 1160
BfrI CTTAAG 1 cut(s) 509
BfuAI ACCTGC 1 cut(s) 1621
BisI GCNGC 6 cut(s) 19, 223, 579, 624, 693, 1160
BlsI GCNGC 6 cut(s) 20, 224, 580, 625, 694, 1161
Bme1390I CCNGG 3 cut(s) 628, 1311, 1477
Bme18I GGWCC 3 cut(s) 385, 652, 1390
BmeT110I CYCGRG 2 cut(s) 110, 1188
BmgBI CACGTC 1 cut(s) 440
BmgT120I GGNCC 3 cut(s) 385, 652, 1390
BmiI GGNNCC 5 cut(s) 7, 337, 632, 1050, 1321
BmrFI CCNGG 3 cut(s) 628, 1311, 1477
BmrI ACTGGG 2 cut(s) 966, 1446
BmsI GCATC 2 cut(s) 879, 1186
BmuI ACTGGG 2 cut(s) 966, 1446
BoxI GACNNNNGTC 1 cut(s) 650
BplI GAGNNNNNCTC 2 cut(s) 323, 355
BpmI CTGGAG 1 cut(s) 1242
Bpu14I TTCGAA 1 cut(s) 839
BpuEI CTTGAG 3 cut(s) 122, 353, 1661
BpuMI CCSGG 1 cut(s) 628
BsaHI GRCGYC 1 cut(s) 647
BsaI GGTCTC 2 cut(s) 1173, 1251
BsaJI CCNNGG 3 cut(s) 1309, 1310, 1475
BsaWI WCCGGW 1 cut(s) 456
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bsc4I CCNNNNNNNGG 7 cut(s) 394, 640, 1287, 1315, 1316, 1437, 1708
Bse118I RCCGGY 1 cut(s) 649
Bse1I ACTGG 6 cut(s) 451, 961, 1096, 1154, 1225, 1441
Bse21I CCTNAGG 1 cut(s) 921
Bse3DI GCAATG 1 cut(s) 1134
BseBI CCWGG 2 cut(s) 1311, 1477
BseDI CCNNGG 3 cut(s) 1309, 1310, 1475
BseGI GGATG 5 cut(s) 352, 589, 997, 1084, 1258
BseLI CCNNNNNNNGG 7 cut(s) 394, 640, 1287, 1315, 1316, 1437, 1708
BseMI GCAATG 1 cut(s) 1134
BseMII CTCAG 3 cut(s) 935, 1047, 1184
BseNI ACTGG 6 cut(s) 451, 961, 1096, 1154, 1225, 1441
BseSI GKGCMC 1 cut(s) 1648
BseXI GCAGC 2 cut(s) 679, 1146
BseYI CCCAGC 1 cut(s) 1315
BsgI GTGCAG 1 cut(s) 1539
Bsh1236I CGCG 1 cut(s) 21
BshFI GGCC 3 cut(s) 623, 1542, 1674
BsiHKCI CYCGRG 2 cut(s) 110, 1188
BsiSI CCGG 4 cut(s) 457, 572, 627, 650
BslFI GGGAC 2 cut(s) 1009, 1207
BslI CCNNNNNNNGG 7 cut(s) 394, 640, 1287, 1315, 1316, 1437, 1708
BsmAI GTCTC 7 cut(s) 190, 256, 872, 947, 1173, 1251, 1823
BsmBI CGTCTC 2 cut(s) 190, 256
BsmFI GGGAC 2 cut(s) 1009, 1207
BsnI GGCC 3 cut(s) 623, 1542, 1674
Bso31I GGTCTC 2 cut(s) 1173, 1251
BsoBI CYCGRG 2 cut(s) 110, 1188
Bsp119I TTCGAA 1 cut(s) 839
Bsp1286I GDGCHC 2 cut(s) 635, 1648
Bsp143I GATC 8 cut(s) 79, 246, 335, 430, 1048, 1491, 1698, 1812
BspACI CCGC 7 cut(s) 19, 180, 222, 578, 581, 624, 655
BspANI GGCC 3 cut(s) 623, 1542, 1674
BspCNI CTCAG 3 cut(s) 934, 1048, 1183
BspFNI CGCG 1 cut(s) 21
BspLI GGNNCC 5 cut(s) 7, 337, 632, 1050, 1321
BspMAI CTGCAG 1 cut(s) 1164
BspMI ACCTGC 1 cut(s) 1621
BspPI GGATC 8 cut(s) 74, 254, 330, 343, 1043, 1056, 1486, 1693
BspT104I TTCGAA 1 cut(s) 839
BspTI CTTAAG 1 cut(s) 509
BspTNI GGTCTC 2 cut(s) 1173, 1251
BsrBI CCGCTC 1 cut(s) 657
BsrDI GCAATG 1 cut(s) 1134
BsrFI RCCGGY 1 cut(s) 649
BsrI ACTGG 6 cut(s) 451, 961, 1096, 1154, 1225, 1441
BssAI RCCGGY 1 cut(s) 649
BssECI CCNNGG 3 cut(s) 1309, 1310, 1475
BssMI GATC 8 cut(s) 79, 246, 335, 430, 1048, 1491, 1698, 1812
BssNI GRCGYC 1 cut(s) 647
Bst2UI CCWGG 2 cut(s) 1311, 1477
Bst4CI ACNGT 5 cut(s) 360, 545, 827, 1266, 1597
Bst6I CTCTTC 3 cut(s) 89, 163, 1412
BstACI GRCGYC 1 cut(s) 647
BstAFI CTTAAG 1 cut(s) 509
BstAPI GCANNNNNTGC 1 cut(s) 1301
BstBI TTCGAA 1 cut(s) 839
BstC8I GCNNGC 1 cut(s) 1293
BstDEI CTNAG 4 cut(s) 921, 1032, 1056, 1170
BstENI CCTNNNNNAGG 2 cut(s) 1285, 1706
BstF5I GGATG 5 cut(s) 352, 589, 997, 1084, 1258
BstFNI CGCG 1 cut(s) 21
BstKTI GATC 8 cut(s) 82, 249, 338, 433, 1051, 1494, 1701, 1815
BstMAI GTCTC 7 cut(s) 190, 256, 872, 947, 1173, 1251, 1823
BstMBI GATC 8 cut(s) 79, 246, 335, 430, 1048, 1491, 1698, 1812
BstMWI GCNNNNNNNGC 3 cut(s) 236, 1159, 1301
BstNI CCWGG 2 cut(s) 1311, 1477
BstNSI RCATGY 1 cut(s) 412
BstPAI GACNNNNGTC 1 cut(s) 650
BstSCI CCNGG 3 cut(s) 626, 1309, 1475
BstSFI CTRYAG 1 cut(s) 1160
BstSLI GKGCMC 1 cut(s) 1648
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 2 cut(s) 679, 1146
BstX2I RGATCY 3 cut(s) 335, 1048, 1698
BstYI RGATCY 3 cut(s) 335, 1048, 1698
Bsu36I CCTNAGG 1 cut(s) 921
BsuRI GGCC 3 cut(s) 623, 1542, 1674
BtrI CACGTC 1 cut(s) 440
BtsCI GGATG 5 cut(s) 352, 589, 997, 1084, 1258
BtsI GCAGTG 1 cut(s) 1169
BveI ACCTGC 1 cut(s) 1621
Cac8I GCNNGC 1 cut(s) 1293
Cfr10I RCCGGY 1 cut(s) 649
Cfr13I GGNCC 3 cut(s) 385, 652, 1390
CpoI CGGWCCG 1 cut(s) 652
CseI GACGC 4 cut(s) 115, 655, 727, 1568
Csp6I GTAC 4 cut(s) 142, 454, 502, 1371
CspCI CAANNNNNGTGG 2 cut(s) 358, 393
CspI CGGWCCG 1 cut(s) 652
CviAII CATG 8 cut(s) 409, 619, 797, 1334, 1535, 1551, 1649, 1738
CviQI GTAC 4 cut(s) 142, 454, 502, 1371
DdeI CTNAG 4 cut(s) 921, 1032, 1056, 1170
DpnI GATC 8 cut(s) 81, 248, 337, 432, 1050, 1493, 1700, 1814
DpnII GATC 8 cut(s) 79, 246, 335, 430, 1048, 1491, 1698, 1812
EaeI YGGCCR 1 cut(s) 621
Eam1104I CTCTTC 3 cut(s) 89, 163, 1412
EarI CTCTTC 3 cut(s) 89, 163, 1412
EciI GGCGGA 2 cut(s) 169, 596
Eco147I AGGCCT 1 cut(s) 1674
Eco24I GRGCYC 1 cut(s) 635
Eco31I GGTCTC 2 cut(s) 1173, 1251
Eco32I GATATC 1 cut(s) 1018
Eco47I GGWCC 3 cut(s) 385, 652, 1390
Eco57I CTGAAG 3 cut(s) 920, 926, 1791
Eco81I CCTNAGG 1 cut(s) 921
Eco88I CYCGRG 2 cut(s) 110, 1188
EcoNI CCTNNNNNAGG 2 cut(s) 1285, 1706
EcoRI GAATTC 1 cut(s) 1147
EcoRII CCWGG 2 cut(s) 1309, 1475
EcoRV GATATC 1 cut(s) 1018
EcoT38I GRGCYC 1 cut(s) 635
Esp3I CGTCTC 2 cut(s) 190, 256
FaeI CATG 8 cut(s) 412, 622, 800, 1337, 1538, 1554, 1652, 1741
FaqI GGGAC 2 cut(s) 1009, 1207
FatI CATG 8 cut(s) 408, 618, 796, 1333, 1534, 1550, 1648, 1737
FblI GTMKAC 2 cut(s) 297, 1061
Fnu4HI GCNGC 6 cut(s) 19, 223, 579, 624, 693, 1160
FokI GGATG 5 cut(s) 359, 596, 1004, 1091, 1265
FriOI GRGCYC 1 cut(s) 635
Fsp4HI GCNGC 6 cut(s) 19, 223, 579, 624, 693, 1160
FspBI CTAG 2 cut(s) 393, 1140
GluI GCNGC 6 cut(s) 19, 223, 579, 624, 693, 1160
GsaI CCCAGC 1 cut(s) 1319
GsuI CTGGAG 1 cut(s) 1242
HaeIII GGCC 3 cut(s) 623, 1542, 1674
HapII CCGG 4 cut(s) 457, 572, 627, 650
HgaI GACGC 4 cut(s) 115, 655, 727, 1568
Hin1I GRCGYC 1 cut(s) 647
Hin1II CATG 8 cut(s) 412, 622, 800, 1337, 1538, 1554, 1652, 1741
HincII GTYRAC 2 cut(s) 298, 1062
HindII GTYRAC 2 cut(s) 298, 1062
HpaII CCGG 4 cut(s) 457, 572, 627, 650
HphI GGTGA 8 cut(s) 256, 460, 577, 655, 760, 1012, 1574, 1645
Hpy166II GTNNAC 6 cut(s) 298, 502, 902, 1062, 1112, 1571
Hpy188I TCNGA 9 cut(s) 37, 43, 84, 346, 389, 711, 785, 1057, 1131
Hpy188III TCNNGA 8 cut(s) 112, 283, 479, 535, 1188, 1250, 1499, 1678
Hpy8I GTNNAC 6 cut(s) 298, 502, 902, 1062, 1112, 1571
HpyAV CCTTC 9 cut(s) 162, 280, 286, 796, 850, 901, 982, 1062, 1702
HpyCH4III ACNGT 5 cut(s) 360, 545, 827, 1266, 1597
HpyCH4IV ACGT 3 cut(s) 294, 439, 498
HpyCH4V TGCA 7 cut(s) 412, 728, 1162, 1401, 1520, 1592, 1741
HpyF10VI GCNNNNNNNGC 3 cut(s) 236, 1159, 1301
HpyF3I CTNAG 4 cut(s) 921, 1032, 1056, 1170
HpySE526I ACGT 3 cut(s) 294, 439, 498
Hsp92I GRCGYC 1 cut(s) 647
Hsp92II CATG 8 cut(s) 412, 622, 800, 1337, 1538, 1554, 1652, 1741
Kzo9I GATC 8 cut(s) 79, 246, 335, 430, 1048, 1491, 1698, 1812
LmnI GCTCC 5 cut(s) 235, 630, 662, 1477, 1780
Lsp1109I GCAGC 2 cut(s) 679, 1146
LweI GCATC 2 cut(s) 879, 1186
MaeI CTAG 2 cut(s) 393, 1140
MaeII ACGT 3 cut(s) 294, 439, 498
MaeIII GTNAC 9 cut(s) 466, 643, 967, 1342, 1555, 1580, 1655, 1685, 1760
MalI GATC 8 cut(s) 81, 248, 337, 432, 1050, 1493, 1700, 1814
MbiI CCGCTC 1 cut(s) 657
MboI GATC 8 cut(s) 79, 246, 335, 430, 1048, 1491, 1698, 1812
MboII GAAGA 9 cut(s) 85, 106, 150, 430, 865, 973, 1270, 1399, 1648
MfeI CAATTG 3 cut(s) 413, 668, 1043
MflI RGATCY 3 cut(s) 335, 1048, 1698
MhlI GDGCHC 2 cut(s) 635, 1648
MluCI AATT 9 cut(s) 413, 473, 637, 668, 778, 818, 1043, 1147, 1198
MlyI GAGTC 8 cut(s) 32, 581, 907, 1046, 1067, 1496, 1724, 1757
MmeI TCCRAC 8 cut(s) 60, 66, 107, 279, 315, 324, 684, 924
MroXI GAANNNNTTC 2 cut(s) 151, 422
MseI TTAA 1 cut(s) 510
MslI CAYNNNNRTG 2 cut(s) 407, 1338
MspCI CTTAAG 1 cut(s) 509
MspI CCGG 4 cut(s) 457, 572, 627, 650
MspR9I CCNGG 3 cut(s) 628, 1311, 1477
MunI CAATTG 3 cut(s) 413, 668, 1043
MvaI CCWGG 2 cut(s) 1311, 1477
MvnI CGCG 1 cut(s) 21
MwoI GCNNNNNNNGC 3 cut(s) 236, 1159, 1301
NciI CCSGG 1 cut(s) 628
NdeII GATC 8 cut(s) 79, 246, 335, 430, 1048, 1491, 1698, 1812
NlaIII CATG 8 cut(s) 412, 622, 800, 1337, 1538, 1554, 1652, 1741
NlaIV GGNNCC 5 cut(s) 7, 337, 632, 1050, 1321
NmeAIII GCCGAG 1 cut(s) 569
NmuCI GTSAC 7 cut(s) 466, 643, 967, 1342, 1555, 1580, 1760
NspI RCATGY 1 cut(s) 412
NspV TTCGAA 1 cut(s) 839
PaeR7I CTCGAG 2 cut(s) 110, 1188
PaqCI CACCTGC 1 cut(s) 1621
PasI CCCWGGG 1 cut(s) 1310
PceI AGGCCT 1 cut(s) 1674
PcsI WCGNNNNNNNCGW 5 cut(s) 300, 306, 318, 321, 327
PdmI GAANNNNTTC 2 cut(s) 151, 422
PfeI GAWTC 5 cut(s) 364, 462, 755, 793, 1663
PkrI GCNGC 6 cut(s) 20, 224, 580, 625, 694, 1161
PleI GAGTC 8 cut(s) 32, 581, 906, 1045, 1066, 1496, 1723, 1757
PpsI GAGTC 8 cut(s) 32, 581, 906, 1045, 1066, 1496, 1723, 1757
PshAI GACNNNNGTC 1 cut(s) 650
Psp6I CCWGG 2 cut(s) 1309, 1475
PspFI CCCAGC 1 cut(s) 1315
PspGI CCWGG 2 cut(s) 1309, 1475
PspN4I GGNNCC 5 cut(s) 7, 337, 632, 1050, 1321
PspPI GGNCC 3 cut(s) 385, 652, 1390
PstI CTGCAG 1 cut(s) 1164
PsuI RGATCY 3 cut(s) 335, 1048, 1698
RsaI GTAC 4 cut(s) 143, 455, 503, 1372
RsaNI GTAC 4 cut(s) 142, 454, 502, 1371
RseI CAYNNNNRTG 2 cut(s) 407, 1338
Rsr2I CGGWCCG 1 cut(s) 652
RsrII CGGWCCG 1 cut(s) 652
SalI GTCGAC 2 cut(s) 296, 1060
SaqAI TTAA 1 cut(s) 510
SatI GCNGC 6 cut(s) 19, 223, 579, 624, 693, 1160
Sau3AI GATC 8 cut(s) 79, 246, 335, 430, 1048, 1491, 1698, 1812
Sau96I GGNCC 3 cut(s) 385, 652, 1390
SchI GAGTC 8 cut(s) 32, 581, 907, 1046, 1067, 1496, 1724, 1757
ScrFI CCNGG 3 cut(s) 628, 1311, 1477
SduI GDGCHC 2 cut(s) 635, 1648
SfaNI GCATC 2 cut(s) 879, 1186
SfcI CTRYAG 1 cut(s) 1160
Sfr274I CTCGAG 2 cut(s) 110, 1188
SfuI TTCGAA 1 cut(s) 839
SgrDI CGTCGACG 1 cut(s) 296
SinI GGWCC 3 cut(s) 385, 652, 1390
SlaI CTCGAG 2 cut(s) 110, 1188
SmiMI CAYNNNNRTG 2 cut(s) 407, 1338
SmlI CTYRAG 6 cut(s) 110, 137, 368, 509, 1188, 1676
SmoI CTYRAG 6 cut(s) 110, 137, 368, 509, 1188, 1676
Sse9I AATT 9 cut(s) 413, 473, 637, 668, 778, 818, 1043, 1147, 1198
SseBI AGGCCT 1 cut(s) 1674
SsiI CCGC 7 cut(s) 19, 180, 222, 578, 581, 624, 655
SspMI CTAG 2 cut(s) 393, 1140
StuI AGGCCT 1 cut(s) 1674
StyD4I CCNGG 3 cut(s) 626, 1309, 1475
TaaI ACNGT 5 cut(s) 360, 545, 827, 1266, 1597
TaiI ACGT 3 cut(s) 297, 442, 501
TaqI TCGA 8 cut(s) 111, 297, 822, 839, 845, 1061, 1189, 1811
TasI AATT 9 cut(s) 413, 473, 637, 668, 778, 818, 1043, 1147, 1198
TauI GCSGC 4 cut(s) 21, 225, 581, 626
TfiI GAWTC 5 cut(s) 364, 462, 755, 793, 1663
Tru1I TTAA 1 cut(s) 510
Tru9I TTAA 1 cut(s) 510
TseFI GTSAC 7 cut(s) 466, 643, 967, 1342, 1555, 1580, 1760
TseI GCWGC 2 cut(s) 692, 1159
Tsp45I GTSAC 7 cut(s) 466, 643, 967, 1342, 1555, 1580, 1760
TspDTI ATGAA 5 cut(s) 785, 1523, 1665, 1726, 1814
TspGWI ACGGA 3 cut(s) 159, 533, 986
Vha464I CTTAAG 1 cut(s) 509
VpaK11BI GGWCC 3 cut(s) 385, 652, 1390
XagI CCTNNNNNAGG 2 cut(s) 1285, 1706
XapI RAATTY 5 cut(s) 473, 778, 818, 1147, 1198
XceI RCATGY 1 cut(s) 412
XcmI CCANNNNNNNNNTGG 1 cut(s) 1161
XhoI CTCGAG 2 cut(s) 110, 1188
XmiI GTMKAC 2 cut(s) 297, 1061
XmnI GAANNNNTTC 2 cut(s) 151, 422
XspI CTAG 2 cut(s) 393, 1140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.