Rmu_sc0000659.1_g000002

VID27 cytoplasmic protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000659.1
OG0013857
Physical Location & Seq
Reverse (-)
2098 .. 10467
8370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000659.1_g000002.1.cds

Sequence Viewer

Length: 2361 bp
atgggaacctcccagagccgcgaggactacatctccgactccgacgactacaaagaggaggaggatgaagaagaacgatccgacgatacagaagagttccaagacgctcgagagaaccagccgaccccaatcggcgatctcgacgccaagcttcaagccttgaagctcaagtacggaactccttcctcttcctcctccaccccctcgtccgccgtctcacataacgccgtcaagctctacctccacatcggcggcaacgctcccagcgccaagtggatcgtctccagcaagctcacctccttctccttcgtcaagacctccaacgtcgacggcgacagcgacgacgacgacgactacgagggatcctcgtcggatggtaaaggacagtggattctcaaggttgcgggcaaggtccgagctagggtttccaccgacatgcaattgaagatgttcggcgatcagcgacgtgtggatttcgtgtctagaggcgtctgggcgctgaaattcttcaccgacgagcagtaccggagattcgtcaccgaatttcaggactgcttgtttgagaacgtgtacgggcttaaggcgacggaggagaacaaggtcaagatttatggtaaggagtttttggggtgggtgaagccggaggcggcggatgactcggcgtgggagtatgctgacgattatgacatggccgccgggagccccaattcggtgacgccggtccgctccaaccagcaattgatggaggagtttgaggaggctgcgaatggaggtgttcagagcttgacgcttggtgcattggataatagtttcttggtgaatgattctggtgttcaggtgtataggaatttcagagatgggattcatgggaagggtgtggttgcgaaattcgacagtgggggtggttcgaaatcgacaccgaagaaggctctgcttatgaggggggagactaatatgatgcttatgagtccactgaaggagggaaagcctcaggcaaatgggcttcagcagttggacattgagactgggaagattgtcacggaatggaagtttgagaaggatgggacagagattacaatgagggatatcaccaatgacactaaggagtcgcaattggatccttctgagtcgacatttctgggtttggatgataacaggctttgccagtgggatatgcgtgaacgcagaggaatggttcagaacattgctagtttgaattcgccagtgctgcagtggtctcaggggcatcagttttctcgagggacgaattttcagtgctttgctactactggagatgggtctattgttgttgggtctctggatgggaagatacggttgtattccaagacctctatgaggcaggcaaagactgctttcccagggctgggttcccccattactcatgttgatgtgacttatgatgggaagtgggtgttgggtacaactgacacttacttggtccttatatgcactctcttcactgacaaagatggaaagaccaagactgggtttagtggtagaatgggaaacaagataccagctcccaggttgttgaagctgatccctcttgactcacatttggctggtgcagacaataagtttcatggaggccacttctcatgggtcactgaaagtggtaaacaagagcgtcaccttgttgcaacagtgggaaagttcagtgtgatatgggatttccaatgcaagtcattagggagatttagactcacgttaaagtgtaaggctgaagctttggctctaagaggcctacatgctgttgttcttcatggtatgtcaaacattaaagttgaaggcgactcaaagatcatgattgactgtgacattgaattcaagcacgtttggcgtgaggcgaactttgttgcagatgctcttgctgatttgggtcacgacaccgacagcgtgcttcgcatggatgttgatatatctcaagctttggccttcaaaacaaagccgcttgttcaagccgtggagattttgaaaccaagctgcactccctccggcggtttcgcagccgtccggccaccccaggacgggccgttcagcttgaaatgggaaatcgggttctaccttgatctccgatttccggccagaatctttgggggttttggttgttggggaagtgctgaacgtgttcctaaccttgttgcagctcgttttgatcgtcccatccgatgcgtcacctggttggtagtcccttctaactacctgtggctagttggcagtccattctacccaccacctcctattccggttggcagtcccttccgatgcgtcatctgggtggcagtccctcccagatggcatgagatgattaggaagcagtccttcctaatcatcaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VID27

Protein Analysis

786

Amino Acids

87.41

Weight (kDa)

5.82

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013857)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19240
fragaria_vesca FvH4_2g06100
malus_domestica MD05G1080700.v1.1
prunus_persica Prupe.8G124300_v2.0.a1
pyrus_communis pycom05g07340
rosa_chinensis RchiOBHm_Chr6g0257121
rosa_laevigata RLG00000014677
rosa_multiflora Rmu_co8449469.1_g000001 Rmu_sc0000659.1_g000002
rosa_roxburghii Rroxscaffold_7G00208510
rosa_rugosa Rorug05G0575200
rosa_samantha Rh2BG009300 Rh6AG093100 Rh6BG084000 Rh6CG080400 Rh6DG075800
rosa_wichuraiana Rw6G008010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 726
AccI GTMKAC 2 cut(s) 327, 1130
AccII CGCG 1 cut(s) 21
AclWI GGATC 7 cut(s) 72, 284, 357, 370, 1112, 1125, 1555
AcoI YGGCCR 3 cut(s) 690, 2036, 2103
AcsI RAATTY 7 cut(s) 503, 542, 847, 887, 1216, 1267, 1844
AcuI CTGAAG 3 cut(s) 989, 995, 1764
AcyI GRCGYC 3 cut(s) 144, 489, 716
AfaI GTAC 4 cut(s) 173, 524, 572, 1441
AflII CTTAAG 1 cut(s) 578
AflIII ACRYGT 3 cut(s) 466, 567, 2146
AjiI CACGTC 1 cut(s) 467
AjnI CCWGG 4 cut(s) 1378, 1544, 2043, 2198
AjuI GAANNNNNNNTTGG 2 cut(s) 1418, 1450
AloI GAACNNNNNNTCC 4 cut(s) 2039, 2063, 2071, 2095
Alw26I GTCTC 6 cut(s) 220, 286, 941, 1016, 1242, 1320
AlwI GGATC 7 cut(s) 72, 284, 357, 370, 1112, 1125, 1555
Ama87I CYCGRG 2 cut(s) 108, 1257
AoxI GGCC 7 cut(s) 690, 1609, 1762, 1953, 2036, 2051, 2103
ApeKI GCWGC 5 cut(s) 761, 1228, 2004, 2027, 2165
ApoI RAATTY 7 cut(s) 503, 542, 847, 887, 1216, 1267, 1844
ArsI GACNNNNNNTTYG 2 cut(s) 542, 574
Asp700I GAANNNNTTC 4 cut(s) 181, 449, 506, 2148
AspLEI GCGC 2 cut(s) 269, 499
AspS9I GGNCC 4 cut(s) 412, 721, 1459, 2051
AsuC2I CCSGG 1 cut(s) 697
AsuHPI GGTGA 9 cut(s) 286, 502, 529, 646, 724, 829, 1081, 1643, 2188
AsuII TTCGAA 1 cut(s) 908
AvaI CYCGRG 2 cut(s) 108, 1257
AvaII GGWCC 3 cut(s) 412, 721, 1459
AxyI CCTNAGG 1 cut(s) 990
BaeI ACNNNNGTAYC 2 cut(s) 1322, 1355
BamHI GGATCC 2 cut(s) 362, 1117
BanII GRGCYC 1 cut(s) 704
BarI GAAGNNNNNNTAC 2 cut(s) 155, 187
BbvI GCAGC 5 cut(s) 748, 1215, 1991, 2039, 2177
BceAI ACGGC 6 cut(s) 197, 212, 346, 1967, 2015, 2038
BciT130I CCWGG 4 cut(s) 1380, 1546, 2045, 2200
BcnI CCSGG 1 cut(s) 697
BcoDI GTCTC 6 cut(s) 220, 286, 941, 1016, 1242, 1320
BfaI CTAG 4 cut(s) 420, 483, 1209, 2231
BfmI CTRYAG 1 cut(s) 1229
BfoI RGCGCY 2 cut(s) 270, 500
BfrI CTTAAG 1 cut(s) 578
Bme1390I CCNGG 5 cut(s) 697, 1380, 1546, 2045, 2200
Bme18I GGWCC 3 cut(s) 412, 721, 1459
BmeT110I CYCGRG 2 cut(s) 108, 1257
BmgBI CACGTC 1 cut(s) 467
BmgT120I GGNCC 4 cut(s) 412, 721, 1459, 2051
BmiI GGNNCC 5 cut(s) 7, 364, 701, 1119, 1390
BmrFI CCNGG 5 cut(s) 697, 1380, 1546, 2045, 2200
BmrI ACTGGG 2 cut(s) 1035, 1515
BmsI GCATC 5 cut(s) 948, 1255, 1873, 2180, 2276
BmuI ACTGGG 2 cut(s) 1035, 1515
BoxI GACNNNNGTC 1 cut(s) 719
BplI GAGNNNNNCTC 2 cut(s) 350, 382
BpmI CTGGAG 2 cut(s) 268, 1311
Bpu14I TTCGAA 1 cut(s) 908
BpuEI CTTGAG 3 cut(s) 152, 380, 1929
BpuMI CCSGG 1 cut(s) 697
BsaHI GRCGYC 3 cut(s) 144, 489, 716
BsaI GGTCTC 2 cut(s) 1242, 1320
BsaJI CCNNGG 5 cut(s) 1378, 1379, 1544, 1983, 2043
BsaWI WCCGGW 2 cut(s) 525, 2266
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bse118I RCCGGY 1 cut(s) 718
Bse1I ACTGG 5 cut(s) 1030, 1165, 1223, 1294, 1510
Bse21I CCTNAGG 1 cut(s) 990
Bse3DI GCAATG 1 cut(s) 1203
BseBI CCWGG 4 cut(s) 1380, 1546, 2045, 2200
BseDI CCNNGG 5 cut(s) 1378, 1379, 1544, 1983, 2043
BseGI GGATG 8 cut(s) 70, 379, 658, 1066, 1153, 1327, 1936, 2184
BseMI GCAATG 1 cut(s) 1203
BseMII CTCAG 3 cut(s) 1004, 1116, 1253
BseNI ACTGG 5 cut(s) 1030, 1165, 1223, 1294, 1510
BseRI GAGGAG 6 cut(s) 71, 74, 184, 605, 761, 770
BseXI GCAGC 5 cut(s) 748, 1215, 1991, 2039, 2177
BseYI CCCAGC 2 cut(s) 263, 1384
BsgI GTGCAG 2 cut(s) 1608, 1990
Bsh1236I CGCG 1 cut(s) 21
BshFI GGCC 7 cut(s) 692, 1611, 1764, 1955, 2038, 2053, 2105
BsiHKCI CYCGRG 2 cut(s) 108, 1257
BsiSI CCGG 8 cut(s) 526, 641, 696, 719, 2016, 2035, 2102, 2267
BslFI GGGAC 6 cut(s) 1078, 1276, 2166, 2195, 2262, 2291
BsmAI GTCTC 6 cut(s) 220, 286, 941, 1016, 1242, 1320
BsmBI CGTCTC 2 cut(s) 220, 286
BsmFI GGGAC 6 cut(s) 1078, 1276, 2166, 2195, 2262, 2291
BsnI GGCC 7 cut(s) 692, 1611, 1764, 1955, 2038, 2053, 2105
Bso31I GGTCTC 2 cut(s) 1242, 1320
BsoBI CYCGRG 2 cut(s) 108, 1257
Bsp119I TTCGAA 1 cut(s) 908
Bsp1286I GDGCHC 1 cut(s) 704
BspANI GGCC 7 cut(s) 692, 1611, 1764, 1955, 2038, 2053, 2105
BspCNI CTCAG 3 cut(s) 1003, 1117, 1252
BspFNI CGCG 1 cut(s) 21
BspHI TCATGA 1 cut(s) 1824
BspLI GGNNCC 5 cut(s) 7, 364, 701, 1119, 1390
BspMAI CTGCAG 1 cut(s) 1233
BspPI GGATC 7 cut(s) 72, 284, 357, 370, 1112, 1125, 1555
BspT104I TTCGAA 1 cut(s) 908
BspTI CTTAAG 1 cut(s) 578
BspTNI GGTCTC 2 cut(s) 1242, 1320
BsrBI CCGCTC 1 cut(s) 726
BsrDI GCAATG 1 cut(s) 1203
BsrFI RCCGGY 1 cut(s) 718
BsrI ACTGG 5 cut(s) 1030, 1165, 1223, 1294, 1510
BssAI RCCGGY 1 cut(s) 718
BssECI CCNNGG 5 cut(s) 1378, 1379, 1544, 1983, 2043
BssNI GRCGYC 3 cut(s) 144, 489, 716
Bst2UI CCWGG 4 cut(s) 1380, 1546, 2045, 2200
Bst4CI ACNGT 5 cut(s) 387, 896, 1335, 1666, 1835
Bst6I CTCTTC 3 cut(s) 87, 193, 1481
BstACI GRCGYC 3 cut(s) 144, 489, 716
BstAFI CTTAAG 1 cut(s) 578
BstAPI GCANNNNNTGC 1 cut(s) 1370
BstBI TTCGAA 1 cut(s) 908
BstC8I GCNNGC 4 cut(s) 290, 406, 1362, 1919
BstDEI CTNAG 5 cut(s) 990, 1101, 1125, 1239, 1757
BstDSI CCRYGG 1 cut(s) 1983
BstENI CCTNNNNNAGG 1 cut(s) 1354
BstF5I GGATG 8 cut(s) 70, 379, 658, 1066, 1153, 1327, 1936, 2184
BstFNI CGCG 1 cut(s) 21
BstH2I RGCGCY 2 cut(s) 270, 500
BstHHI GCGC 2 cut(s) 269, 499
BstMAI GTCTC 6 cut(s) 220, 286, 941, 1016, 1242, 1320
BstMWI GCNNNNNNNGC 5 cut(s) 266, 1228, 1370, 1858, 1923
BstNI CCWGG 4 cut(s) 1380, 1546, 2045, 2200
BstNSI RCATGY 2 cut(s) 439, 1772
BstPAI GACNNNNGTC 1 cut(s) 719
BstSCI CCNGG 5 cut(s) 695, 1378, 1544, 2043, 2198
BstSFI CTRYAG 1 cut(s) 1229
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 5 cut(s) 748, 1215, 1991, 2039, 2177
BstX2I RGATCY 2 cut(s) 362, 1117
BstYI RGATCY 2 cut(s) 362, 1117
Bsu36I CCTNAGG 1 cut(s) 990
BsuRI GGCC 7 cut(s) 692, 1611, 1764, 1955, 2038, 2053, 2105
BtgI CCRYGG 1 cut(s) 1983
BtrI CACGTC 1 cut(s) 467
BtsCI GGATG 8 cut(s) 70, 379, 658, 1066, 1153, 1327, 1936, 2184
BtsI GCAGTG 1 cut(s) 1238
Cac8I GCNNGC 4 cut(s) 290, 406, 1362, 1919
CciI TCATGA 1 cut(s) 1824
CfoI GCGC 2 cut(s) 269, 499
Cfr10I RCCGGY 1 cut(s) 718
Cfr13I GGNCC 4 cut(s) 412, 721, 1459, 2051
CpoI CGGWCCG 1 cut(s) 721
CseI GACGC 8 cut(s) 113, 152, 478, 724, 796, 1637, 2182, 2278
CsiI ACCWGGT 1 cut(s) 2198
Csp6I GTAC 4 cut(s) 172, 523, 571, 1440
CspI CGGWCCG 1 cut(s) 721
CviQI GTAC 4 cut(s) 172, 523, 571, 1440
DdeI CTNAG 5 cut(s) 990, 1101, 1125, 1239, 1757
EaeI YGGCCR 3 cut(s) 690, 2036, 2103
Eam1104I CTCTTC 3 cut(s) 87, 193, 1481
EarI CTCTTC 3 cut(s) 87, 193, 1481
EciI GGCGGA 2 cut(s) 199, 665
Eco147I AGGCCT 1 cut(s) 1764
Eco24I GRGCYC 1 cut(s) 704
Eco31I GGTCTC 2 cut(s) 1242, 1320
Eco32I GATATC 1 cut(s) 1087
Eco47I GGWCC 3 cut(s) 412, 721, 1459
Eco57I CTGAAG 3 cut(s) 989, 995, 1764
Eco81I CCTNAGG 1 cut(s) 990
Eco88I CYCGRG 2 cut(s) 108, 1257
EcoNI CCTNNNNNAGG 1 cut(s) 1354
EcoRI GAATTC 2 cut(s) 1216, 1844
EcoRII CCWGG 4 cut(s) 1378, 1544, 2043, 2198
EcoRV GATATC 1 cut(s) 1087
EcoT38I GRGCYC 1 cut(s) 704
Esp3I CGTCTC 2 cut(s) 220, 286
FalI AAGNNNNNCTT 2 cut(s) 2327, 2359
FaqI GGGAC 6 cut(s) 1078, 1276, 2166, 2195, 2262, 2291
FauI CCCGC 1 cut(s) 397
FblI GTMKAC 2 cut(s) 327, 1130
FokI GGATG 8 cut(s) 77, 386, 665, 1073, 1160, 1334, 1943, 2171
FriOI GRGCYC 1 cut(s) 704
FspBI CTAG 4 cut(s) 420, 483, 1209, 2231
GlaI GCGC 2 cut(s) 268, 498
GsaI CCCAGC 2 cut(s) 267, 1388
GsuI CTGGAG 2 cut(s) 268, 1311
HaeII RGCGCY 2 cut(s) 270, 500
HaeIII GGCC 7 cut(s) 692, 1611, 1764, 1955, 2038, 2053, 2105
HapII CCGG 8 cut(s) 526, 641, 696, 719, 2016, 2035, 2102, 2267
HgaI GACGC 8 cut(s) 113, 152, 478, 724, 796, 1637, 2182, 2278
HhaI GCGC 2 cut(s) 269, 499
Hin1I GRCGYC 3 cut(s) 144, 489, 716
Hin6I GCGC 2 cut(s) 267, 497
HinP1I GCGC 2 cut(s) 267, 497
HincII GTYRAC 2 cut(s) 328, 1131
HindII GTYRAC 2 cut(s) 328, 1131
HindIII AAGCTT 3 cut(s) 149, 1746, 1947
HpaII CCGG 8 cut(s) 526, 641, 696, 719, 2016, 2035, 2102, 2267
HphI GGTGA 9 cut(s) 286, 502, 529, 646, 724, 829, 1081, 1643, 2188
Hpy166II GTNNAC 6 cut(s) 328, 571, 971, 1131, 1181, 1640
Hpy8I GTNNAC 6 cut(s) 328, 571, 971, 1131, 1181, 1640
HpyCH4III ACNGT 5 cut(s) 387, 896, 1335, 1666, 1835
HpyCH4IV ACGT 6 cut(s) 324, 466, 567, 1727, 1854, 2146
HpyF10VI GCNNNNNNNGC 5 cut(s) 266, 1228, 1370, 1858, 1923
HpyF3I CTNAG 5 cut(s) 990, 1101, 1125, 1239, 1757
HpySE526I ACGT 6 cut(s) 324, 466, 567, 1727, 1854, 2146
Hsp92I GRCGYC 3 cut(s) 144, 489, 716
HspAI GCGC 2 cut(s) 267, 497
LmnI GCTCC 4 cut(s) 265, 699, 731, 1546
Lsp1109I GCAGC 5 cut(s) 748, 1215, 1991, 2039, 2177
LweI GCATC 5 cut(s) 948, 1255, 1873, 2180, 2276
MabI ACCWGGT 1 cut(s) 2198
MaeI CTAG 4 cut(s) 420, 483, 1209, 2231
MaeII ACGT 6 cut(s) 324, 466, 567, 1727, 1854, 2146
MaeIII GTNAC 9 cut(s) 535, 712, 1036, 1411, 1624, 1649, 1835, 1901, 2194
MbiI CCGCTC 1 cut(s) 726
MfeI CAATTG 3 cut(s) 440, 737, 1112
MflI RGATCY 2 cut(s) 362, 1117
MhlI GDGCHC 1 cut(s) 704
MlyI GAGTC 8 cut(s) 32, 650, 976, 1115, 1136, 1565, 1716, 1808
MmeI TCCRAC 7 cut(s) 60, 66, 105, 345, 351, 753, 993
MroXI GAANNNNTTC 4 cut(s) 181, 449, 506, 2148
MseI TTAA 3 cut(s) 579, 1730, 1800
MslI CAYNNNNRTG 3 cut(s) 434, 1407, 2297
MspCI CTTAAG 1 cut(s) 578
MspI CCGG 8 cut(s) 526, 641, 696, 719, 2016, 2035, 2102, 2267
MspR9I CCNGG 5 cut(s) 697, 1380, 1546, 2045, 2200
MunI CAATTG 3 cut(s) 440, 737, 1112
MvaI CCWGG 4 cut(s) 1380, 1546, 2045, 2200
MvnI CGCG 1 cut(s) 21
MwoI GCNNNNNNNGC 5 cut(s) 266, 1228, 1370, 1858, 1923
NciI CCSGG 1 cut(s) 697
NlaIV GGNNCC 5 cut(s) 7, 364, 701, 1119, 1390
NmeAIII GCCGAG 1 cut(s) 638
NmuCI GTSAC 9 cut(s) 535, 712, 1036, 1411, 1624, 1649, 1835, 1901, 2194
NspI RCATGY 2 cut(s) 439, 1772
NspV TTCGAA 1 cut(s) 908
PaeR7I CTCGAG 2 cut(s) 108, 1257
PagI TCATGA 1 cut(s) 1824
PasI CCCWGGG 1 cut(s) 1379
PceI AGGCCT 1 cut(s) 1764
PcsI WCGNNNNNNNCGW 7 cut(s) 138, 330, 336, 348, 354, 2176, 2185
PdmI GAANNNNTTC 4 cut(s) 181, 449, 506, 2148
PfeI GAWTC 5 cut(s) 391, 531, 824, 862, 2109
PleI GAGTC 8 cut(s) 32, 650, 975, 1114, 1135, 1565, 1716, 1808
PpsI GAGTC 8 cut(s) 32, 650, 975, 1114, 1135, 1565, 1716, 1808
PshAI GACNNNNGTC 1 cut(s) 719
Psp6I CCWGG 4 cut(s) 1378, 1544, 2043, 2198
PspFI CCCAGC 2 cut(s) 263, 1384
PspGI CCWGG 4 cut(s) 1378, 1544, 2043, 2198
PspN4I GGNNCC 5 cut(s) 7, 364, 701, 1119, 1390
PspPI GGNCC 4 cut(s) 412, 721, 1459, 2051
PstI CTGCAG 1 cut(s) 1233
PsuI RGATCY 2 cut(s) 362, 1117
RsaI GTAC 4 cut(s) 173, 524, 572, 1441
RsaNI GTAC 4 cut(s) 172, 523, 571, 1440
RseI CAYNNNNRTG 3 cut(s) 434, 1407, 2297
Rsr2I CGGWCCG 1 cut(s) 721
RsrII CGGWCCG 1 cut(s) 721
SalI GTCGAC 2 cut(s) 326, 1129
SaqAI TTAA 3 cut(s) 579, 1730, 1800
Sau96I GGNCC 4 cut(s) 412, 721, 1459, 2051
SchI GAGTC 8 cut(s) 32, 650, 976, 1115, 1136, 1565, 1716, 1808
ScrFI CCNGG 5 cut(s) 697, 1380, 1546, 2045, 2200
SduI GDGCHC 1 cut(s) 704
SexAI ACCWGGT 1 cut(s) 2198
SfaNI GCATC 5 cut(s) 948, 1255, 1873, 2180, 2276
SfcI CTRYAG 1 cut(s) 1229
Sfr274I CTCGAG 2 cut(s) 108, 1257
SfuI TTCGAA 1 cut(s) 908
SgrDI CGTCGACG 1 cut(s) 326
SinI GGWCC 3 cut(s) 412, 721, 1459
SlaI CTCGAG 2 cut(s) 108, 1257
SmiMI CAYNNNNRTG 3 cut(s) 434, 1407, 2297
SmlI CTYRAG 6 cut(s) 108, 167, 395, 578, 1257, 1944
SmoI CTYRAG 6 cut(s) 108, 167, 395, 578, 1257, 1944
SseBI AGGCCT 1 cut(s) 1764
SspMI CTAG 4 cut(s) 420, 483, 1209, 2231
StuI AGGCCT 1 cut(s) 1764
StyD4I CCNGG 5 cut(s) 695, 1378, 1544, 2043, 2198
TaaI ACNGT 5 cut(s) 387, 896, 1335, 1666, 1835
TaiI ACGT 6 cut(s) 327, 469, 570, 1730, 1857, 2149
TaqI TCGA 8 cut(s) 109, 141, 327, 891, 908, 914, 1130, 1258
TauI GCSGC 5 cut(s) 21, 255, 650, 695, 1972
TfiI GAWTC 5 cut(s) 391, 531, 824, 862, 2109
Tru1I TTAA 3 cut(s) 579, 1730, 1800
Tru9I TTAA 3 cut(s) 579, 1730, 1800
TseFI GTSAC 9 cut(s) 535, 712, 1036, 1411, 1624, 1649, 1835, 1901, 2194
TseI GCWGC 5 cut(s) 761, 1228, 2004, 2027, 2165
Tsp45I GTSAC 9 cut(s) 535, 712, 1036, 1411, 1624, 1649, 1835, 1901, 2194
TspDTI ATGAA 4 cut(s) 81, 854, 1592, 1772
TspGWI ACGGA 3 cut(s) 189, 602, 1055
Vha464I CTTAAG 1 cut(s) 578
VpaK11BI GGWCC 3 cut(s) 412, 721, 1459
XagI CCTNNNNNAGG 1 cut(s) 1354
XapI RAATTY 7 cut(s) 503, 542, 847, 887, 1216, 1267, 1844
XbaI TCTAGA 1 cut(s) 482
XceI RCATGY 2 cut(s) 439, 1772
XcmI CCANNNNNNNNNTGG 1 cut(s) 1230
XhoI CTCGAG 2 cut(s) 108, 1257
XmiI GTMKAC 2 cut(s) 327, 1130
XmnI GAANNNNTTC 4 cut(s) 181, 449, 506, 2148
XspI CTAG 4 cut(s) 420, 483, 1209, 2231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.