pycom05g07340

VID27 cytoplasmic protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0013857
Physical Location & Seq
Forward (+)
10347408 .. 10351342
3935 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g07340.2

Sequence Viewer

Length: 2202 bp
ATGGTATATATCAGCACTCAAAAGAAAACAACTTTGAACATAGACGTGGCATGTGTCTCACGAAATGAGAGATGGACGACACCACAGCCAATTCTTTCCTTACCCAAGAAGCAATCGCCACGTGAAATCAACGCCACCATACAACTCTGCACTCACTCCCACAAAATCATAGCCTCTAAAAGCTTTCGCATTTCTCCATTTCTCGATCTCTCCGACAAAAATCGGATTTCGAATTTCCAAAAATCCATGGGAACCGCTCAGAGCCGGGAGGATCACATCACCGACTCCGACGACTACGAGTCGGAGGAGGAGGAGGAACAGAAATCGGAGGACGAAGACCAATACGACGACGCAGAGGACAACTACAAGCCACCGCAAACCGCTTCTTCCAACCCCAACTCCAAAACCCTAGAGTCCTCCGTCGACGACGTCGATGCCAGGCTCAAGGCCCTCAAGCTTAAGTACGGCTCTTCTTCCTCCTCTTCCTCCGCCTCCGCCGCTCAAGGCCAGAACGCCGTCAAGCTCTACCTCCATGTCGGTGGCAACACTCCCAAGGCCAAGTGGATCGTCTCCGAGAAGACGGCCTACTCCTTCATCAAGACCTCTAATGTCGACGGCGACGGTGATTACGACGACGACGGAAGGATGGACCGCGAGGGGGAGTGGGTTCTGAAAGTCGGGTCGAAAGTCCGAGCTAGGGTTTCCACCGACCTGCAATTGAAGATGTTCGGCGATCAGCGCCGTGTCGATTTCGTGTCCAAGGGCGTCTGGGCTCTGAAATTTTACACCGACGAGCAGTACCGGAGGTTCGTGACGGAGTTTCAGGACTACTTGTTCGAGAACGTGTACGGAGTCAAGGCCACGGAGGAGAACAAGGTCAAGGTCTACGGCAAGGAGTTTCTCGGGTGGGTTAAGCCAGAGGTGGCGGATGATTCGGCCTGGGACTATGAGGATTCCGAGAAAAGCCCAAAGTCGGCCACGCCGGTGCGGCCCAGCCACGACTTGATGGAGGAGTTCGAGGAGGCCGCCAATGGAGGGGTCCAGAGCTTAACTCTGGGCGCATTAGACAATAGCTACTTGGTGAACGAGAATGGTGTTCAGTTTTACCGGAATTTCAACCATGGGATTCATGGGAAGGGAGTGTGTGCGAAATTTGATACCGGAGGTTCAAGTTTGGGGAAATCGACACCCAAGAAGGCTTTGTTAATGAGGGCTGAGACTAATATGCTACTTATGAGTCCATTTAAGGAAGGCAAGCCTCAAGCTAATGGGCTTCAGCAGCTCGATATTGAGACGGGCAAGATTGTCACTGAATGGAAGTTTCAAAAGGATGGAACAGATATTACAATGAGGGATATCACTAATGACACTAAAGGGTCGCAATTGGATCCTTCTGAATCGACCTTTTTGGGTTTGGATGATAACAGGCTTTGTCAGTGGGATATGCGTGACCGTGCTGGAATGGTTCAGAACATTGCTAATGCGAATTCCCCGGTCCTGCATTGGACTCAGGGGCATCAGTTTTCTCGAGGGACCAATTTTCAGTGCTTTGCTACTACTGGAGATGGGTCTATTGTTGTTGGGGGTCTGGAAGGGAAGATAAGGTTATATTCCAAGACCTCCATGAGGCAGGCAAAGACTGCTTTTCCGGGGCTCGGTTCTCCCATTACGCATATTGATGTAACTTATGATGGGAAGTGGGTGTTAGGTACCACTGATACTTATTTGGTACTTATTTGCACTCTGTTCACTGACAAAGATGGAACGACCAAGACTGGATTTAGTGGTAGAGCTGGAAACAAGATACCAGCTCCCAGGCTGTTGAAGCTCACCCCTTTGGACTCACATTTGGCTGGCACAGACAATACATTTCAACGGGGCCATTTCTCATGGGTCACGGAGAACGGTAAACAAGAGCGCCACCTAGTCGCAACAGTCGGAAAATTCAGTGTGGTATGGGATTTCCAGCAGGTGAAGAACAGTGCTCATGATTGTTACAGGAATCAGCAAGGCCTCAAGAGTTGTTACTGTTACAAGATTCTGTTGAAGGATGAATCCATCGTTGAGAGTCGCTTTATGCACGACAATTATGGTACCAACTCCCCCGAAGCTCCACTGGTGGTGGCAACCCCGATGAAAGTGAGCTCGATCAGTCTCTCCGGCAAACGATCGATCTTCGCCACCCCCCACCTTTGTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VID27

Protein Analysis

734

Amino Acids

81.84

Weight (kDa)

6.2

Isoelectric Point (pI)

34.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013857)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19240
fragaria_vesca FvH4_2g06100
malus_domestica MD05G1080700.v1.1
prunus_persica Prupe.8G124300_v2.0.a1
pyrus_communis pycom05g07340
rosa_chinensis RchiOBHm_Chr6g0257121
rosa_laevigata RLG00000014677
rosa_multiflora Rmu_co8449469.1_g000001 Rmu_sc0000659.1_g000002
rosa_roxburghii Rroxscaffold_7G00208510
rosa_rugosa Rorug05G0575200
rosa_samantha Rh2BG009300 Rh6AG093100 Rh6BG084000 Rh6CG080400 Rh6DG075800
rosa_wichuraiana Rw6G008010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1960
AatII GACGTC 1 cut(s) 432
Acc36I ACCTGC 2 cut(s) 720, 1960
Acc65I GGTACC 2 cut(s) 1709, 2093
AccB1I GGYRCC 2 cut(s) 1709, 2093
AccBSI CCGCTC 2 cut(s) 257, 500
AccI GTMKAC 3 cut(s) 423, 612, 885
AccII CGCG 1 cut(s) 654
AclWI GGATC 4 cut(s) 279, 572, 1382, 1395
AcoI YGGCCR 1 cut(s) 975
AcsI RAATTY 6 cut(s) 232, 779, 1111, 1151, 1486, 1943
AcuI CTGAAG 1 cut(s) 1259
AcvI CACGTG 1 cut(s) 122
AcyI GRCGYC 2 cut(s) 429, 765
AfaI GTAC 6 cut(s) 464, 800, 848, 1711, 1731, 2095
AfiI CCNNNNNNNGG 6 cut(s) 658, 697, 973, 1035, 1626, 1655
AflII CTTAAG 1 cut(s) 458
AflIII ACRYGT 1 cut(s) 843
AgsI TTSAA 8 cut(s) 37, 721, 1117, 1170, 1325, 1825, 1874, 2047
AhdI GACNNNNNGTC 1 cut(s) 298
AjiI CACGTC 1 cut(s) 46
AjnI CCWGG 3 cut(s) 437, 938, 1814
AleI CACNNNNGTG 1 cut(s) 983
AloI GAACNNNNNNTCC 2 cut(s) 818, 850
Alw21I GWGCWC 2 cut(s) 1987, 2147
Alw26I GTCTC 5 cut(s) 61, 574, 1211, 1286, 2159
AlwI GGATC 4 cut(s) 279, 572, 1382, 1395
Ama87I CYCGRG 2 cut(s) 902, 1527
ApeKI GCWGC 1 cut(s) 1279
ApoI RAATTY 6 cut(s) 232, 779, 1111, 1151, 1486, 1943
ArsI GACNNNNNNTTYG 2 cut(s) 818, 850
Asp700I GAANNNNTTC 1 cut(s) 725
Asp718I GGTACC 2 cut(s) 1709, 2093
AspLEI GCGC 3 cut(s) 741, 1061, 1920
AspS9I GGNCC 7 cut(s) 448, 649, 990, 1039, 1495, 1533, 1879
AsuC2I CCSGG 3 cut(s) 266, 1493, 1650
AsuHPI GGTGA 5 cut(s) 271, 635, 1093, 1822, 1984
AsuII TTCGAA 1 cut(s) 230
AvaI CYCGRG 2 cut(s) 902, 1527
AvaII GGWCC 4 cut(s) 649, 1039, 1495, 1533
BamHI GGATCC 1 cut(s) 1387
BanI GGYRCC 2 cut(s) 1709, 2093
BanII GRGCYC 3 cut(s) 775, 1656, 2147
BarI GAAGNNNNNNTAC 2 cut(s) 569, 601
BbrPI CACGTG 1 cut(s) 122
BbsI GAAGAC 2 cut(s) 342, 584
Bbv12I GWGCWC 2 cut(s) 1987, 2147
BbvI GCAGC 1 cut(s) 1291
BccI CCATC 8 cut(s) 66, 640, 1000, 1325, 1559, 1685, 1754, 2066
BceAI ACGGC 6 cut(s) 481, 500, 597, 631, 726, 904
BcgI CGANNNNNNTGC 2 cut(s) 416, 450
BciT130I CCWGG 3 cut(s) 439, 940, 1816
BcnI CCSGG 3 cut(s) 266, 1493, 1650
BcoDI GTCTC 5 cut(s) 61, 574, 1211, 1286, 2159
BfaI CTAG 3 cut(s) 410, 696, 1925
BfoI RGCGCY 2 cut(s) 742, 1921
BfrI CTTAAG 1 cut(s) 458
BfuAI ACCTGC 2 cut(s) 720, 1960
BglI GCCNNNNNGGC 1 cut(s) 988
BisI GCNGC 4 cut(s) 498, 989, 1026, 1280
BlsI GCNGC 4 cut(s) 499, 990, 1027, 1281
Bme1390I CCNGG 6 cut(s) 266, 439, 940, 1493, 1650, 1816
Bme18I GGWCC 4 cut(s) 649, 1039, 1495, 1533
BmeRI GACNNNNNGTC 1 cut(s) 298
BmeT110I CYCGRG 2 cut(s) 902, 1527
BmgBI CACGTC 1 cut(s) 46
BmgT120I GGNCC 7 cut(s) 448, 649, 990, 1039, 1495, 1533, 1879
BmiI GGNNCC 7 cut(s) 253, 1040, 1389, 1534, 1711, 1880, 2095
BmrFI CCNGG 6 cut(s) 266, 439, 940, 1493, 1650, 1816
BmsI GCATC 2 cut(s) 424, 1525
BpiI GAAGAC 2 cut(s) 342, 584
BplI GAGNNNNNCTC 2 cut(s) 1036, 1068
BpmI CTGGAG 1 cut(s) 1581
Bpu14I TTCGAA 1 cut(s) 230
BpuEI CTTGAG 5 cut(s) 428, 437, 486, 1245, 2000
BpuMI CCSGG 3 cut(s) 266, 1493, 1650
Bsa29I ATCGAT 1 cut(s) 2171
BsaAI YACGTR 1 cut(s) 122
BsaHI GRCGYC 2 cut(s) 429, 765
BsaJI CCNNGG 9 cut(s) 246, 552, 759, 861, 939, 1120, 1491, 1649, 1814
BsaWI WCCGGW 3 cut(s) 801, 1107, 1160
BsaXI ACNNNNNCTCC 2 cut(s) 383, 413
Bsc4I CCNNNNNNNGG 6 cut(s) 658, 697, 973, 1035, 1626, 1655
Bse118I RCCGGY 1 cut(s) 982
Bse1I ACTGG 3 cut(s) 1564, 1780, 2121
Bse3DI GCAATG 1 cut(s) 1473
BseBI CCWGG 3 cut(s) 439, 940, 1816
BseCI ATCGAT 1 cut(s) 2171
BseDI CCNNGG 9 cut(s) 246, 552, 759, 861, 939, 1120, 1491, 1649, 1814
BseGI GGATG 5 cut(s) 651, 934, 1336, 1423, 2056
BseLI CCNNNNNNNGG 6 cut(s) 658, 697, 973, 1035, 1626, 1655
BseMI GCAATG 1 cut(s) 1473
BseMII CTCAG 3 cut(s) 272, 1206, 1523
BseNI ACTGG 3 cut(s) 1564, 1780, 2121
BseRI GAGGAG 7 cut(s) 320, 323, 326, 469, 881, 1025, 1034
BseXI GCAGC 1 cut(s) 1291
BseYI CCCAGC 1 cut(s) 992
BsgI GTGCAG 1 cut(s) 133
Bsh1236I CGCG 1 cut(s) 654
Bsh1285I CGRYCG 1 cut(s) 2171
BshNI GGYRCC 2 cut(s) 1709, 2093
BshVI ATCGAT 1 cut(s) 2171
BsiEI CGRYCG 1 cut(s) 2171
BsiHKAI GWGCWC 2 cut(s) 1987, 2147
BsiHKCI CYCGRG 2 cut(s) 902, 1527
BsiSI CCGG 8 cut(s) 265, 802, 983, 1108, 1161, 1493, 1649, 2160
BslFI GGGAC 2 cut(s) 956, 1546
BslI CCNNNNNNNGG 6 cut(s) 658, 697, 973, 1035, 1626, 1655
BsmAI GTCTC 5 cut(s) 61, 574, 1211, 1286, 2159
BsmBI CGTCTC 2 cut(s) 574, 1286
BsmFI GGGAC 2 cut(s) 956, 1546
BsoBI CYCGRG 2 cut(s) 902, 1527
Bsp119I TTCGAA 1 cut(s) 230
Bsp1286I GDGCHC 4 cut(s) 775, 1656, 1987, 2147
Bsp143I GATC 8 cut(s) 205, 271, 564, 733, 1387, 2148, 2168, 2172
Bsp19I CCATGG 2 cut(s) 246, 1120
BspCNI CTCAG 3 cut(s) 271, 1207, 1522
BspDI ATCGAT 1 cut(s) 2171
BspFNI CGCG 1 cut(s) 654
BspHI TCATGA 1 cut(s) 1987
BspLI GGNNCC 7 cut(s) 253, 1040, 1389, 1534, 1711, 1880, 2095
BspMI ACCTGC 2 cut(s) 720, 1960
BspPI GGATC 4 cut(s) 279, 572, 1382, 1395
BspQI GCTCTTC 1 cut(s) 475
BspT104I TTCGAA 1 cut(s) 230
BspT107I GGYRCC 2 cut(s) 1709, 2093
BspTI CTTAAG 1 cut(s) 458
BsrBI CCGCTC 2 cut(s) 257, 500
BsrDI GCAATG 1 cut(s) 1473
BsrFI RCCGGY 1 cut(s) 982
BsrI ACTGG 3 cut(s) 1564, 1780, 2121
BssAI RCCGGY 1 cut(s) 982
BssECI CCNNGG 9 cut(s) 246, 552, 759, 861, 939, 1120, 1491, 1649, 1814
BssMI GATC 8 cut(s) 205, 271, 564, 733, 1387, 2148, 2168, 2172
BssNI GRCGYC 2 cut(s) 429, 765
BssT1I CCWWGG 4 cut(s) 246, 552, 759, 1120
Bst2UI CCWGG 3 cut(s) 439, 940, 1816
Bst4CI ACNGT 6 cut(s) 623, 1454, 1907, 1936, 1982, 2030
Bst6I CTCTTC 2 cut(s) 475, 487
BstACI GRCGYC 2 cut(s) 429, 765
BstAFI CTTAAG 1 cut(s) 458
BstAPI GCANNNNNTGC 1 cut(s) 1640
BstBAI YACGTR 1 cut(s) 122
BstBI TTCGAA 1 cut(s) 230
BstC8I GCNNGC 3 cut(s) 1256, 1632, 1855
BstDEI CTNAG 3 cut(s) 258, 1215, 1509
BstDSI CCRYGG 3 cut(s) 246, 861, 1120
BstENI CCTNNNNNAGG 1 cut(s) 1624
BstF5I GGATG 5 cut(s) 651, 934, 1336, 1423, 2056
BstFNI CGCG 1 cut(s) 654
BstH2I RGCGCY 2 cut(s) 742, 1921
BstHHI GCGC 3 cut(s) 741, 1061, 1920
BstKTI GATC 8 cut(s) 208, 274, 567, 736, 1390, 2151, 2171, 2175
BstMAI GTCTC 5 cut(s) 61, 574, 1211, 1286, 2159
BstMBI GATC 8 cut(s) 205, 271, 564, 733, 1387, 2148, 2168, 2172
BstMCI CGRYCG 1 cut(s) 2171
BstMWI GCNNNNNNNGC 6 cut(s) 497, 738, 988, 1279, 1640, 1825
BstNI CCWGG 3 cut(s) 439, 940, 1816
BstNSI RCATGY 1 cut(s) 54
BstSCI CCNGG 6 cut(s) 264, 437, 938, 1491, 1648, 1814
BstUI CGCG 1 cut(s) 654
BstV1I GCAGC 1 cut(s) 1291
BstV2I GAAGAC 2 cut(s) 342, 584
BstX2I RGATCY 1 cut(s) 1387
BstXI CCANNNNNNTGG 1 cut(s) 539
BstYI RGATCY 1 cut(s) 1387
Bsu15I ATCGAT 1 cut(s) 2171
BsuTUI ATCGAT 1 cut(s) 2171
BtgI CCRYGG 3 cut(s) 246, 861, 1120
BtrI CACGTC 1 cut(s) 46
BtsCI GGATG 5 cut(s) 651, 934, 1336, 1423, 2056
BtsIMutI CAGTG 8 cut(s) 1308, 1442, 1550, 1713, 1749, 1954, 1987, 2114
BveI ACCTGC 2 cut(s) 720, 1960
Cac8I GCNNGC 3 cut(s) 1256, 1632, 1855
CciI TCATGA 1 cut(s) 1987
CfoI GCGC 3 cut(s) 741, 1061, 1920
Cfr10I RCCGGY 1 cut(s) 982
Cfr13I GGNCC 7 cut(s) 448, 649, 990, 1039, 1495, 1533, 1879
ClaI ATCGAT 1 cut(s) 2171
CseI GACGC 2 cut(s) 359, 754
Csp6I GTAC 6 cut(s) 463, 799, 847, 1710, 1730, 2094
CviAII CATG 8 cut(s) 51, 247, 533, 1121, 1130, 1624, 1890, 1988
CviQI GTAC 6 cut(s) 463, 799, 847, 1710, 1730, 2094
DdeI CTNAG 3 cut(s) 258, 1215, 1509
DpnI GATC 8 cut(s) 207, 273, 566, 735, 1389, 2150, 2170, 2174
DpnII GATC 8 cut(s) 205, 271, 564, 733, 1387, 2148, 2168, 2172
DriI GACNNNNNGTC 1 cut(s) 298
EaeI YGGCCR 1 cut(s) 975
Eam1104I CTCTTC 2 cut(s) 475, 487
Eam1105I GACNNNNNGTC 1 cut(s) 298
EarI CTCTTC 2 cut(s) 475, 487
EciI GGCGGA 3 cut(s) 478, 484, 941
Ecl136II GAGCTC 1 cut(s) 2145
Eco130I CCWWGG 4 cut(s) 246, 552, 759, 1120
Eco147I AGGCCT 1 cut(s) 2013
Eco24I GRGCYC 3 cut(s) 775, 1656, 2147
Eco32I GATATC 1 cut(s) 1357
Eco47I GGWCC 4 cut(s) 649, 1039, 1495, 1533
Eco53kI GAGCTC 1 cut(s) 2145
Eco57I CTGAAG 1 cut(s) 1259
Eco72I CACGTG 1 cut(s) 122
Eco88I CYCGRG 2 cut(s) 902, 1527
EcoICRI GAGCTC 1 cut(s) 2145
EcoNI CCTNNNNNAGG 1 cut(s) 1624
EcoO109I RGGNCCY 1 cut(s) 448
EcoRI GAATTC 1 cut(s) 1486
EcoRII CCWGG 3 cut(s) 437, 938, 1814
EcoRV GATATC 1 cut(s) 1357
EcoT14I CCWWGG 4 cut(s) 246, 552, 759, 1120
EcoT38I GRGCYC 3 cut(s) 775, 1656, 2147
ErhI CCWWGG 4 cut(s) 246, 552, 759, 1120
Esp3I CGTCTC 2 cut(s) 574, 1286
FaeI CATG 8 cut(s) 54, 250, 536, 1124, 1133, 1627, 1893, 1991
FaqI GGGAC 2 cut(s) 956, 1546
FatI CATG 8 cut(s) 50, 246, 532, 1120, 1129, 1623, 1889, 1987
FblI GTMKAC 3 cut(s) 423, 612, 885
Fnu4HI GCNGC 4 cut(s) 498, 989, 1026, 1280
FokI GGATG 5 cut(s) 658, 941, 1343, 1430, 2063
FriOI GRGCYC 3 cut(s) 775, 1656, 2147
Fsp4HI GCNGC 4 cut(s) 498, 989, 1026, 1280
FspBI CTAG 3 cut(s) 410, 696, 1925
GlaI GCGC 3 cut(s) 740, 1060, 1919
GluI GCNGC 4 cut(s) 498, 989, 1026, 1280
GsaI CCCAGC 1 cut(s) 996
GsuI CTGGAG 1 cut(s) 1581
HaeII RGCGCY 2 cut(s) 742, 1921
HapII CCGG 8 cut(s) 265, 802, 983, 1108, 1161, 1493, 1649, 2160
HgaI GACGC 2 cut(s) 359, 754
HhaI GCGC 3 cut(s) 741, 1061, 1920
Hin1I GRCGYC 2 cut(s) 429, 765
Hin1II CATG 8 cut(s) 54, 250, 536, 1124, 1133, 1627, 1893, 1991
Hin6I GCGC 3 cut(s) 739, 1059, 1918
HinP1I GCGC 3 cut(s) 739, 1059, 1918
HincII GTYRAC 2 cut(s) 424, 613
HindII GTYRAC 2 cut(s) 424, 613
HindIII AAGCTT 2 cut(s) 181, 455
HpaII CCGG 8 cut(s) 265, 802, 983, 1108, 1161, 1493, 1649, 2160
HphI GGTGA 5 cut(s) 271, 635, 1093, 1822, 1984
Hpy166II GTNNAC 7 cut(s) 424, 613, 847, 886, 1084, 1749, 1910
Hpy8I GTNNAC 7 cut(s) 424, 613, 847, 886, 1084, 1749, 1910
HpyAV CCTTC 8 cut(s) 601, 636, 1129, 1189, 1244, 1401, 1586, 2041
HpyCH4III ACNGT 6 cut(s) 623, 1454, 1907, 1936, 1982, 2030
HpyCH4IV ACGT 4 cut(s) 45, 121, 429, 843
HpyCH4V TGCA 5 cut(s) 150, 715, 1501, 1740, 2080
HpyF10VI GCNNNNNNNGC 6 cut(s) 497, 738, 988, 1279, 1640, 1825
HpyF3I CTNAG 3 cut(s) 258, 1215, 1509
HpySE526I ACGT 4 cut(s) 45, 121, 429, 843
Hsp92I GRCGYC 2 cut(s) 429, 765
Hsp92II CATG 8 cut(s) 54, 250, 536, 1124, 1133, 1627, 1893, 1991
HspAI GCGC 3 cut(s) 739, 1059, 1918
KpnI GGTACC 2 cut(s) 1713, 2097
Kzo9I GATC 8 cut(s) 205, 271, 564, 733, 1387, 2148, 2168, 2172
LguI GCTCTTC 1 cut(s) 475
LmnI GCTCC 2 cut(s) 1816, 2116
Lsp1109I GCAGC 1 cut(s) 1291
LweI GCATC 2 cut(s) 424, 1525
MaeI CTAG 3 cut(s) 410, 696, 1925
MaeII ACGT 4 cut(s) 45, 121, 429, 843
MaeIII GTNAC 8 cut(s) 811, 1306, 1448, 1681, 1894, 1994, 2024, 2030
MalI GATC 8 cut(s) 207, 273, 566, 735, 1389, 2150, 2170, 2174
MbiI CCGCTC 2 cut(s) 257, 500
MboI GATC 8 cut(s) 205, 271, 564, 733, 1387, 2148, 2168, 2172
MfeI CAATTG 2 cut(s) 716, 1382
MflI RGATCY 1 cut(s) 1387
MhlI GDGCHC 4 cut(s) 775, 1656, 1987, 2147
MlyI GAGTC 8 cut(s) 278, 308, 422, 861, 1246, 1501, 1835, 2077
MmeI TCCRAC 5 cut(s) 237, 282, 312, 414, 1918
MroXI GAANNNNTTC 1 cut(s) 725
MseI TTAA 5 cut(s) 459, 912, 1049, 1205, 1245
MslI CAYNNNNRTG 4 cut(s) 44, 537, 983, 1677
MspCI CTTAAG 1 cut(s) 458
MspI CCGG 8 cut(s) 265, 802, 983, 1108, 1161, 1493, 1649, 2160
MspR9I CCNGG 6 cut(s) 266, 439, 940, 1493, 1650, 1816
MunI CAATTG 2 cut(s) 716, 1382
MvaI CCWGG 3 cut(s) 439, 940, 1816
MvnI CGCG 1 cut(s) 654
MwoI GCNNNNNNNGC 6 cut(s) 497, 738, 988, 1279, 1640, 1825
NciI CCSGG 3 cut(s) 266, 1493, 1650
NcoI CCATGG 2 cut(s) 246, 1120
NdeII GATC 8 cut(s) 205, 271, 564, 733, 1387, 2148, 2168, 2172
NlaIII CATG 8 cut(s) 54, 250, 536, 1124, 1133, 1627, 1893, 1991
NlaIV GGNNCC 7 cut(s) 253, 1040, 1389, 1534, 1711, 1880, 2095
NmuCI GTSAC 4 cut(s) 811, 1306, 1448, 1894
NspI RCATGY 1 cut(s) 54
NspV TTCGAA 1 cut(s) 230
OliI CACNNNNGTG 1 cut(s) 983
PaeR7I CTCGAG 1 cut(s) 1527
PagI TCATGA 1 cut(s) 1987
PaqCI CACCTGC 1 cut(s) 1960
PceI AGGCCT 1 cut(s) 2013
PciSI GCTCTTC 1 cut(s) 475
PcsI WCGNNNNNNNCGW 3 cut(s) 210, 429, 627
PdmI GAANNNNTTC 1 cut(s) 725
PfeI GAWTC 7 cut(s) 932, 953, 1126, 1397, 2002, 2038, 2054
PflFI GACNNNGTC 1 cut(s) 428
PkrI GCNGC 4 cut(s) 499, 990, 1027, 1281
Ple19I CGATCG 1 cut(s) 2171
PleI GAGTC 8 cut(s) 278, 307, 421, 860, 1245, 1501, 1835, 2076
PmaCI CACGTG 1 cut(s) 122
PmlI CACGTG 1 cut(s) 122
PpsI GAGTC 8 cut(s) 278, 307, 421, 860, 1245, 1501, 1835, 2076
Ppu21I YACGTR 1 cut(s) 122
Psp124BI GAGCTC 1 cut(s) 2147
Psp6I CCWGG 3 cut(s) 437, 938, 1814
PspCI CACGTG 1 cut(s) 122
PspFI CCCAGC 1 cut(s) 992
PspGI CCWGG 3 cut(s) 437, 938, 1814
PspN4I GGNNCC 7 cut(s) 253, 1040, 1389, 1534, 1711, 1880, 2095
PspPI GGNCC 7 cut(s) 448, 649, 990, 1039, 1495, 1533, 1879
PsrI GAACNNNNNNTAC 4 cut(s) 791, 823, 1327, 1359
PsuI RGATCY 1 cut(s) 1387
PsyI GACNNNGTC 1 cut(s) 428
PvuI CGATCG 1 cut(s) 2171
RsaI GTAC 6 cut(s) 464, 800, 848, 1711, 1731, 2095
RsaNI GTAC 6 cut(s) 463, 799, 847, 1710, 1730, 2094
RseI CAYNNNNRTG 4 cut(s) 44, 537, 983, 1677
SacI GAGCTC 1 cut(s) 2147
SalI GTCGAC 2 cut(s) 422, 611
SapI GCTCTTC 1 cut(s) 475
SaqAI TTAA 5 cut(s) 459, 912, 1049, 1205, 1245
SatI GCNGC 4 cut(s) 498, 989, 1026, 1280
Sau3AI GATC 8 cut(s) 205, 271, 564, 733, 1387, 2148, 2168, 2172
Sau96I GGNCC 7 cut(s) 448, 649, 990, 1039, 1495, 1533, 1879
SchI GAGTC 8 cut(s) 278, 308, 422, 861, 1246, 1501, 1835, 2077
ScrFI CCNGG 6 cut(s) 266, 439, 940, 1493, 1650, 1816
SduI GDGCHC 4 cut(s) 775, 1656, 1987, 2147
SfaNI GCATC 2 cut(s) 424, 1525
Sfr274I CTCGAG 1 cut(s) 1527
SfuI TTCGAA 1 cut(s) 230
SgrAI CRCCGGYG 1 cut(s) 982
SgrDI CGTCGACG 1 cut(s) 422
SinI GGWCC 4 cut(s) 649, 1039, 1495, 1533
SlaI CTCGAG 1 cut(s) 1527
SmiMI CAYNNNNRTG 4 cut(s) 44, 537, 983, 1677
SmlI CTYRAG 7 cut(s) 443, 452, 458, 501, 1260, 1527, 2015
SmoI CTYRAG 7 cut(s) 443, 452, 458, 501, 1260, 1527, 2015
SseBI AGGCCT 1 cut(s) 2013
SspMI CTAG 3 cut(s) 410, 696, 1925
SstI GAGCTC 1 cut(s) 2147
StuI AGGCCT 1 cut(s) 2013
StyD4I CCNGG 6 cut(s) 264, 437, 938, 1491, 1648, 1814
StyI CCWWGG 4 cut(s) 246, 552, 759, 1120
TaaI ACNGT 6 cut(s) 623, 1454, 1907, 1936, 1982, 2030
TaiI ACGT 4 cut(s) 48, 124, 432, 846
TauI GCSGC 3 cut(s) 500, 991, 1028
TfiI GAWTC 7 cut(s) 932, 953, 1126, 1397, 2002, 2038, 2054
Tru1I TTAA 5 cut(s) 459, 912, 1049, 1205, 1245
Tru9I TTAA 5 cut(s) 459, 912, 1049, 1205, 1245
TscAI CASTG 8 cut(s) 1315, 1442, 1550, 1720, 1756, 1954, 1987, 2121
TseFI GTSAC 4 cut(s) 811, 1306, 1448, 1894
TseI GCWGC 1 cut(s) 1279
Tsp45I GTSAC 4 cut(s) 811, 1306, 1448, 1894
TspDTI ATGAA 4 cut(s) 583, 1118, 2067, 2150
TspGWI ACGGA 6 cut(s) 409, 654, 830, 864, 878, 1913
TspRI CASTG 8 cut(s) 1315, 1442, 1550, 1720, 1756, 1954, 1987, 2121
Tth111I GACNNNGTC 1 cut(s) 428
Vha464I CTTAAG 1 cut(s) 458
VpaK11BI GGWCC 4 cut(s) 649, 1039, 1495, 1533
XagI CCTNNNNNAGG 1 cut(s) 1624
XapI RAATTY 6 cut(s) 232, 779, 1111, 1151, 1486, 1943
XceI RCATGY 1 cut(s) 54
XcmI CCANNNNNNNNNTGG 1 cut(s) 1127
XhoI CTCGAG 1 cut(s) 1527
XmiI GTMKAC 3 cut(s) 423, 612, 885
XmnI GAANNNNTTC 1 cut(s) 725
XspI CTAG 3 cut(s) 410, 696, 1925
ZraI GACGTC 1 cut(s) 430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.