FvH4_2g14220

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
12497855 .. 12499977
2123 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g14220.t2

Sequence Viewer

Length: 1251 bp
ATGGGGAAAATGGGGACCTCTCTAGTTTTCAGTCTTCTAGTGGCATTAGTCGCTTTTGCCTCGCAAACCTCCGCAAACTACCCTTACTCCTCTCCTCCACCACCTGCTTCTCCTCCTTACCACTACAAGTCACCACCGCCGCCTCCGCCACCAGTGCACTACGCACCACCCCATCATCCTTACTATCCTCCCAAGTCACCGCCTAAGCCTCCGGTGTACTCTCCACCAAAGCATCCTCATTACCCACCAAAGTCACCACCCTCACCCACACCACCGGTGTACTCGCCGCCTAAGCATCCCCATTACCCACCAAAGTCACCACCTAAGCCTCCGGTGTACTCTCCTCCTAAGCACCCACATTACCCTCCCAAGTCACCTCCCAAGCCTCCGGTGTACCCGCCACCAAAGACACCTGTCTACCACTACAAATCTCCACCACCTCCGTCACCACCACCACCAAAGGTGCCATACCACTACAAGTCTCCTCCTCCTCCATCACCACCACCACCTAAGGTCCCTTACCATTACAAGTCTCCTCCACCACCCCCACCACACAAGAAGCCCTACCATCCACACCACTCACCACCACCACCAAAGAAGCCATACCACTACAAGTCTCCACCACCTCCACCACCACCGAAGAAGCCTTACCACTACAAGTCTCCACCACCCCCGCCACCACACAAGAAGCCCTACCACCCACATCACTCACCACCACCACCAAAGAAGCCATACCACTACAAGTCTCCTCCACCACCAACGCCAGTCTACTCACCACCTCACCACCCCTACTACCCCCCCAAGTCACCACCTAAGACACCGGTCTACTCACCACCCAAGCACCCTCATTACCCTCCCAAGTCACCACCCTCACCAACACCACCAGTGTACTCACCACCCAAGCATCCTCACTACCCTCCCAAGTCACCACCCTCTCCAACACCACCCAAGTACTCACCACCCAAGCACCCCCATTACCCTCCTAAGCCACCACCATCCCCAACACCACCAGTGTACTCACCACCTAAGCACCCCCACTACCCTCCCAAGTCACCGCCTTACCACTACAAGTCTCCACCACCGCCTTCTCCTCCTCCTCCAGTCTACTCTCCACCCCACATTCCATACCACTACAAGTCACCACCACCACCACCACCACCACCAACGAAGCCTTACAAGCCTCCTACTCCTCCCGTTCACACTCCACCGGCTTACATCTACTCCTCACCTCCTCCTCCTCACCACTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

417

Amino Acids

46.31

Weight (kDa)

9.96

Isoelectric Point (pI)

134.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 112
Acc36I ACCTGC 1 cut(s) 112
AccB1I GGYRCC 1 cut(s) 463
AccI GTMKAC 4 cut(s) 417, 768, 825, 1104
AfaI GTAC 7 cut(s) 218, 281, 338, 395, 890, 953, 1016
AgeI ACCGGT 2 cut(s) 274, 820
Alw21I GWGCWC 1 cut(s) 159
Alw26I GTCTC 6 cut(s) 486, 537, 621, 666, 750, 1077
Alw44I GTGCAC 1 cut(s) 155
ApaLI GTGCAC 1 cut(s) 155
AsiGI ACCGGT 2 cut(s) 274, 820
AspS9I GGNCC 2 cut(s) 15, 514
AvaII GGWCC 2 cut(s) 15, 514
AxyI CCTNAGG 1 cut(s) 510
BaeGI GKGCMC 1 cut(s) 159
BanI GGYRCC 1 cut(s) 463
BarI GAAGNNNNNNTAC 2 cut(s) 632, 664
BbsI GAAGAC 1 cut(s) 26
Bbv12I GWGCWC 1 cut(s) 159
BccI CCATC 4 cut(s) 180, 502, 576, 1003
BcoDI GTCTC 6 cut(s) 486, 537, 621, 666, 750, 1077
BfaI CTAG 3 cut(s) 23, 38, 1249
BfuAI ACCTGC 1 cut(s) 112
BisI GCNGC 2 cut(s) 140, 287
BlsI GCNGC 2 cut(s) 141, 288
BmcAI AGTACT 1 cut(s) 953
Bme18I GGWCC 2 cut(s) 15, 514
BmgT120I GGNCC 2 cut(s) 15, 514
BmiI GGNNCC 3 cut(s) 16, 465, 516
BmsI GCATC 3 cut(s) 241, 304, 913
BoxI GACNNNNGTC 2 cut(s) 413, 821
BpiI GAAGAC 1 cut(s) 26
BpmI CTGGAG 1 cut(s) 1083
Bpu10I CCTNAGC 6 cut(s) 204, 291, 324, 348, 984, 1026
BsaWI WCCGGW 5 cut(s) 211, 274, 331, 388, 820
BsaXI ACNNNNNCTCC 4 cut(s) 71, 101, 1205, 1235
Bse118I RCCGGY 3 cut(s) 274, 820, 1207
Bse1I ACTGG 5 cut(s) 152, 764, 884, 1010, 1100
Bse21I CCTNAGG 1 cut(s) 510
BseGI GGATG 6 cut(s) 175, 232, 295, 568, 904, 995
BseNI ACTGG 5 cut(s) 152, 764, 884, 1010, 1100
BseSI GKGCMC 1 cut(s) 159
BshNI GGYRCC 1 cut(s) 463
BshTI ACCGGT 2 cut(s) 274, 820
BsiHKAI GWGCWC 1 cut(s) 159
BsiSI CCGG 6 cut(s) 212, 275, 332, 389, 821, 1208
BslFI GGGAC 2 cut(s) 28, 500
BsmAI GTCTC 6 cut(s) 486, 537, 621, 666, 750, 1077
BsmFI GGGAC 2 cut(s) 28, 500
Bsp1286I GDGCHC 1 cut(s) 159
BspLI GGNNCC 3 cut(s) 16, 465, 516
BspMI ACCTGC 1 cut(s) 112
BspT107I GGYRCC 1 cut(s) 463
BsrFI RCCGGY 3 cut(s) 274, 820, 1207
BsrI ACTGG 5 cut(s) 152, 764, 884, 1010, 1100
BssAI RCCGGY 3 cut(s) 274, 820, 1207
BstDEI CTNAG 8 cut(s) 204, 291, 324, 348, 510, 813, 984, 1026
BstF5I GGATG 6 cut(s) 175, 232, 295, 568, 904, 995
BstMAI GTCTC 6 cut(s) 486, 537, 621, 666, 750, 1077
BstMWI GCNNNNNNNGC 5 cut(s) 50, 145, 154, 292, 1177
BstPAI GACNNNNGTC 2 cut(s) 413, 821
BstSLI GKGCMC 1 cut(s) 159
BstV2I GAAGAC 1 cut(s) 26
Bsu36I CCTNAGG 1 cut(s) 510
BtsCI GGATG 6 cut(s) 175, 232, 295, 568, 904, 995
BtsIMutI CAGTG 3 cut(s) 159, 891, 1017
BveI ACCTGC 1 cut(s) 112
Cfr10I RCCGGY 3 cut(s) 274, 820, 1207
Cfr13I GGNCC 2 cut(s) 15, 514
Csp6I GTAC 7 cut(s) 217, 280, 337, 394, 889, 952, 1015
CspAI ACCGGT 2 cut(s) 274, 820
CviQI GTAC 7 cut(s) 217, 280, 337, 394, 889, 952, 1015
DdeI CTNAG 8 cut(s) 204, 291, 324, 348, 510, 813, 984, 1026
EciI GGCGGA 1 cut(s) 135
Eco47I GGWCC 2 cut(s) 15, 514
Eco81I CCTNAGG 1 cut(s) 510
EcoO109I RGGNCCY 2 cut(s) 15, 514
FaiI YATR 4 cut(s) 469, 604, 733, 1126
FaqI GGGAC 2 cut(s) 28, 500
FauI CCCGC 2 cut(s) 405, 681
FblI GTMKAC 4 cut(s) 417, 768, 825, 1104
Fnu4HI GCNGC 2 cut(s) 140, 287
FokI GGATG 6 cut(s) 162, 219, 282, 555, 891, 982
Fsp4HI GCNGC 2 cut(s) 140, 287
FspBI CTAG 3 cut(s) 23, 38, 1249
GluI GCNGC 2 cut(s) 140, 287
GsuI CTGGAG 1 cut(s) 1083
HapII CCGG 6 cut(s) 212, 275, 332, 389, 821, 1208
HpaII CCGG 6 cut(s) 212, 275, 332, 389, 821, 1208
HpyAV CCTTC 1 cut(s) 1095
HpyCH4V TGCA 1 cut(s) 157
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 145, 154, 292, 1177
HpyF3I CTNAG 8 cut(s) 204, 291, 324, 348, 510, 813, 984, 1026
LweI GCATC 3 cut(s) 241, 304, 913
MaeI CTAG 3 cut(s) 23, 38, 1249
MboII GAAGA 2 cut(s) 26, 652
MhlI GDGCHC 1 cut(s) 159
MmeI TCCRAC 1 cut(s) 962
MspI CCGG 6 cut(s) 212, 275, 332, 389, 821, 1208
MwoI GCNNNNNNNGC 5 cut(s) 50, 145, 154, 292, 1177
NlaIV GGNNCC 3 cut(s) 16, 465, 516
PaqCI CACCTGC 1 cut(s) 112
PinAI ACCGGT 2 cut(s) 274, 820
PkrI GCNGC 2 cut(s) 141, 288
PpuMI RGGWCCY 2 cut(s) 15, 514
PshAI GACNNNNGTC 2 cut(s) 413, 821
Psp5II RGGWCCY 2 cut(s) 15, 514
PspN4I GGNNCC 3 cut(s) 16, 465, 516
PspPI GGNCC 2 cut(s) 15, 514
PspPPI RGGWCCY 2 cut(s) 15, 514
RsaI GTAC 7 cut(s) 218, 281, 338, 395, 890, 953, 1016
RsaNI GTAC 7 cut(s) 217, 280, 337, 394, 889, 952, 1015
SatI GCNGC 2 cut(s) 140, 287
Sau96I GGNCC 2 cut(s) 15, 514
ScaI AGTACT 1 cut(s) 953
SduI GDGCHC 1 cut(s) 159
SfaNI GCATC 3 cut(s) 241, 304, 913
SgrAI CRCCGGYG 1 cut(s) 274
SinI GGWCC 2 cut(s) 15, 514
SspMI CTAG 3 cut(s) 23, 38, 1249
TatI WGTACW 6 cut(s) 216, 279, 336, 888, 951, 1014
TauI GCSGC 2 cut(s) 142, 289
TscAI CASTG 3 cut(s) 159, 891, 1017
TspGWI ACGGA 1 cut(s) 432
TspRI CASTG 3 cut(s) 159, 891, 1017
VneI GTGCAC 1 cut(s) 155
VpaK11BI GGWCC 2 cut(s) 15, 514
XmiI GTMKAC 4 cut(s) 417, 768, 825, 1104
XspI CTAG 3 cut(s) 23, 38, 1249
ZrmI AGTACT 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.