Rh6CG218300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
36296419 .. 36298203
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG218300.1

Sequence Viewer

Length: 1302 bp
ATGGGGAAAATGGGGACCTCTCTAGTTTTTAGTCTTCTAGTGGCAATACTCGCCTTCGCCTCGCAAACCTCGGCAAACTACCCTTACTCCTCTCCTCCACCACCTGCTTCTCCTCCTTACCACTACAAGTCACCACCGCCGCCGCCGCCGCCAGTGCACTACGCACCACCCCATCATCCTTACTATCCTCCCAAGTCACCGCCTAAGCCTCCGGTGTACTCTCCACCAAAGCATCCTTATTACCCTCCCAAGTCACCGCCTAAGCCTCCGGTGTACTCCCCTCCTAAGCACCCCCATTACCCTCCTCATTACCCTCCCAAGTCACCACCTAAGCCTCCGGTGTACTCCCCTCCTAAGCACCCCCATTACCCTCCCCACTACCCTCCCAAGTCACCACCTAAGCCTCCGGTGTACTCCCCTCCTAAGCACCCCCATTACCCTCCTCATTACCCTCCCAAGTCACCACCTAAGCCTCCGGTGTACTCCCCTCCTAAGCACCCCCATTACCCTCCCCACTACCCTCCCAAGTCACCACCTAAGCCTCCGGTGTACTCCCCTCCTAAGCACCCCCATTACCCTCCCCACTACCCTCCCAAGTCACCACCTAAGCCTCCGGTGTACCACTACAAATCTCCACCACCTCCACCTCCATCACCACCACCACCAAAGGTGCCTTACCACTACAAGTCTCCTCCACCACCACCACCACACAAGAAGCCCTACCACCCACACCATTCACCACCACCACCCAAGAAGCCATACCACTACTCATCTCCTCCACCACCACCACCAAAGAAGCCATACTACTACAAGTCTCCACCACCACCACCACCACACAAGAAGCCCTACCACCCACACCACTCACCACCACCACCACCAACCCCATCACCACCAAAGAAGCCATACCACTACAAGTCTCCTCCACCACCAACACCAGTCTACTCACCACCTCACCACCCCTACTTCCCCCCCAAGTCACCACCTAAGCCACCAGTCTACTCACCACCCAAGCACCCCCATTACCCTCCCAAGTCGCCACCCTCACCAACTCCACCAGTGTACTCACCACCCAAGCACCCTCACTACCCTCCCAAGTCACCACCTTCCCCAACACCACCAGTGTACTCTCCACCTAAGCACCCCCACTACCCTCCCAAGTCACCACCTTACCACTACAAGTCTCCTCCACCTCCTTCTCCTCCTCCACCACCACCACACAAGCCTTACAAGCCTCCTACTCCTCCCGTTCACACTCCACCGGCTTACATCTACTCCTCACCTCCTCCTCCTCACCACTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

433

Amino Acids

48.51

Weight (kDa)

9.95

Isoelectric Point (pI)

134.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 112
Acc36I ACCTGC 1 cut(s) 112
AccB1I GGYRCC 1 cut(s) 670
AccI GTMKAC 2 cut(s) 939, 996
AciI CCGC 7 cut(s) 137, 140, 143, 146, 149, 200, 257
AfaI GTAC 9 cut(s) 218, 275, 344, 413, 482, 551, 620, 1061, 1124
Alw21I GWGCWC 1 cut(s) 159
Alw26I GTCTC 4 cut(s) 693, 819, 921, 1185
Alw44I GTGCAC 1 cut(s) 155
ApaLI GTGCAC 1 cut(s) 155
AspS9I GGNCC 1 cut(s) 15
AvaII GGWCC 1 cut(s) 15
BaeGI GKGCMC 1 cut(s) 159
BanI GGYRCC 1 cut(s) 670
BarI GAAGNNNNNNTAC 2 cut(s) 788, 820
BbsI GAAGAC 1 cut(s) 26
Bbv12I GWGCWC 1 cut(s) 159
BccI CCATC 3 cut(s) 180, 658, 892
BcoDI GTCTC 4 cut(s) 693, 819, 921, 1185
BfaI CTAG 3 cut(s) 23, 38, 1300
BfuAI ACCTGC 1 cut(s) 112
BisI GCNGC 4 cut(s) 140, 143, 146, 149
BlsI GCNGC 4 cut(s) 141, 144, 147, 150
Bme18I GGWCC 1 cut(s) 15
BmgT120I GGNCC 1 cut(s) 15
BmiI GGNNCC 2 cut(s) 16, 672
BmsI GCATC 1 cut(s) 241
BpiI GAAGAC 1 cut(s) 26
BsaJI CCNNGG 1 cut(s) 69
BsaWI WCCGGW 7 cut(s) 211, 268, 337, 406, 475, 544, 613
BsaXI ACNNNNNCTCC 4 cut(s) 71, 101, 1256, 1286
Bse118I RCCGGY 1 cut(s) 1258
Bse1I ACTGG 5 cut(s) 152, 935, 992, 1055, 1118
BseDI CCNNGG 1 cut(s) 69
BseGI GGATG 2 cut(s) 175, 232
BseNI ACTGG 5 cut(s) 152, 935, 992, 1055, 1118
BseSI GKGCMC 1 cut(s) 159
BshNI GGYRCC 1 cut(s) 670
BsiHKAI GWGCWC 1 cut(s) 159
BsiSI CCGG 8 cut(s) 212, 269, 338, 407, 476, 545, 614, 1259
BslFI GGGAC 1 cut(s) 28
BsmAI GTCTC 4 cut(s) 693, 819, 921, 1185
BsmFI GGGAC 1 cut(s) 28
Bsp1286I GDGCHC 1 cut(s) 159
BspACI CCGC 7 cut(s) 137, 140, 143, 146, 149, 200, 257
BspLI GGNNCC 2 cut(s) 16, 672
BspMI ACCTGC 1 cut(s) 112
BspT107I GGYRCC 1 cut(s) 670
BsrFI RCCGGY 1 cut(s) 1258
BsrI ACTGG 5 cut(s) 152, 935, 992, 1055, 1118
BssAI RCCGGY 1 cut(s) 1258
BssECI CCNNGG 1 cut(s) 69
BstF5I GGATG 2 cut(s) 175, 232
BstMAI GTCTC 4 cut(s) 693, 819, 921, 1185
BstMWI GCNNNNNNNGC 5 cut(s) 50, 145, 148, 154, 1228
BstSLI GKGCMC 1 cut(s) 159
BstV2I GAAGAC 1 cut(s) 26
BtsCI GGATG 2 cut(s) 175, 232
BtsIMutI CAGTG 3 cut(s) 159, 1062, 1125
BveI ACCTGC 1 cut(s) 112
Cfr10I RCCGGY 1 cut(s) 1258
Cfr13I GGNCC 1 cut(s) 15
Csp6I GTAC 9 cut(s) 217, 274, 343, 412, 481, 550, 619, 1060, 1123
CviQI GTAC 9 cut(s) 217, 274, 343, 412, 481, 550, 619, 1060, 1123
Eco47I GGWCC 1 cut(s) 15
EcoO109I RGGNCCY 1 cut(s) 15
FaiI YATR 3 cut(s) 760, 802, 904
FaqI GGGAC 1 cut(s) 28
FblI GTMKAC 2 cut(s) 939, 996
Fnu4HI GCNGC 4 cut(s) 140, 143, 146, 149
FokI GGATG 2 cut(s) 162, 219
Fsp4HI GCNGC 4 cut(s) 140, 143, 146, 149
FspBI CTAG 3 cut(s) 23, 38, 1300
GluI GCNGC 4 cut(s) 140, 143, 146, 149
HapII CCGG 8 cut(s) 212, 269, 338, 407, 476, 545, 614, 1259
HpaII CCGG 8 cut(s) 212, 269, 338, 407, 476, 545, 614, 1259
HpyAV CCTTC 3 cut(s) 64, 1113, 1203
HpyCH4V TGCA 1 cut(s) 157
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 145, 148, 154, 1228
LweI GCATC 1 cut(s) 241
MaeI CTAG 3 cut(s) 23, 38, 1300
MboII GAAGA 1 cut(s) 26
MhlI GDGCHC 1 cut(s) 159
MspI CCGG 8 cut(s) 212, 269, 338, 407, 476, 545, 614, 1259
MwoI GCNNNNNNNGC 5 cut(s) 50, 145, 148, 154, 1228
NlaIV GGNNCC 2 cut(s) 16, 672
NmeAIII GCCGAG 1 cut(s) 50
PaqCI CACCTGC 1 cut(s) 112
PkrI GCNGC 4 cut(s) 141, 144, 147, 150
PpuMI RGGWCCY 1 cut(s) 15
Psp5II RGGWCCY 1 cut(s) 15
PspN4I GGNNCC 2 cut(s) 16, 672
PspPI GGNCC 1 cut(s) 15
PspPPI RGGWCCY 1 cut(s) 15
RsaI GTAC 9 cut(s) 218, 275, 344, 413, 482, 551, 620, 1061, 1124
RsaNI GTAC 9 cut(s) 217, 274, 343, 412, 481, 550, 619, 1060, 1123
SatI GCNGC 4 cut(s) 140, 143, 146, 149
Sau96I GGNCC 1 cut(s) 15
SduI GDGCHC 1 cut(s) 159
SfaNI GCATC 1 cut(s) 241
SinI GGWCC 1 cut(s) 15
SsiI CCGC 7 cut(s) 137, 140, 143, 146, 149, 200, 257
SspMI CTAG 3 cut(s) 23, 38, 1300
TatI WGTACW 8 cut(s) 216, 273, 342, 411, 480, 549, 1059, 1122
TauI GCSGC 4 cut(s) 142, 145, 148, 151
TscAI CASTG 3 cut(s) 159, 1062, 1125
TspRI CASTG 3 cut(s) 159, 1062, 1125
VneI GTGCAC 1 cut(s) 155
VpaK11BI GGWCC 1 cut(s) 15
XmiI GTMKAC 2 cut(s) 939, 996
XspI CTAG 3 cut(s) 23, 38, 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.