No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g14220 FvH4_2g14220 |
| malus_domestica | MD05G1021100.v1.1 |
| pyrus_communis | pycom05g01220 pycom10g01500 |
| rosa_chinensis | RchiOBHm_Chr6g0249201 |
| rosa_laevigata | RLG00000013398 |
| rosa_multiflora | Rmu_sc0004126.1_g000021 |
| rosa_roxburghii | Rroxscaffold_3G00218170 Rroxscaffold_7G00192280 Rroxscaffold_7G00192300 |
| rosa_rugosa | Rorug05G0498700 Rorug06G0101100 |
| rosa_samantha | Rh6AG000100 Rh6AG211800 Rh6BG216000 Rh6CG218300 |
| rosa_wichuraiana | Rw6G018490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 103 |
| Acc36I | ACCTGC | 1 cut(s) | 103 |
| AccI | GTMKAC | 2 cut(s) | 661, 717 |
| AfaI | GTAC | 5 cut(s) | 221, 278, 335, 468, 845 |
| Alw21I | GWGCWC | 2 cut(s) | 162, 405 |
| Alw26I | GTCTC | 3 cut(s) | 541, 643, 906 |
| Alw44I | GTGCAC | 2 cut(s) | 158, 401 |
| ApaLI | GTGCAC | 2 cut(s) | 158, 401 |
| AspS9I | GGNCC | 1 cut(s) | 456 |
| AvaII | GGWCC | 1 cut(s) | 456 |
| BaeGI | GKGCMC | 2 cut(s) | 162, 405 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 510, 542 |
| BbsI | GAAGAC | 1 cut(s) | 17 |
| Bbv12I | GWGCWC | 2 cut(s) | 162, 405 |
| BccI | CCATC | 4 cut(s) | 183, 506, 614, 832 |
| BcoDI | GTCTC | 3 cut(s) | 541, 643, 906 |
| BfaI | CTAG | 3 cut(s) | 14, 29, 1006 |
| BfuAI | ACCTGC | 1 cut(s) | 103 |
| BisI | GCNGC | 8 cut(s) | 131, 134, 137, 140, 143, 146, 149, 152 |
| BlsI | GCNGC | 8 cut(s) | 132, 135, 138, 141, 144, 147, 150, 153 |
| Bme18I | GGWCC | 1 cut(s) | 456 |
| BmgT120I | GGNCC | 1 cut(s) | 456 |
| BmsI | GCATC | 2 cut(s) | 244, 301 |
| BpiI | GAAGAC | 1 cut(s) | 17 |
| Bpu10I | CCTNAGC | 9 cut(s) | 207, 264, 321, 345, 390, 413, 446, 705, 855 |
| BsaJI | CCNNGG | 1 cut(s) | 60 |
| BsaWI | WCCGGW | 6 cut(s) | 214, 271, 328, 397, 453, 461 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 62, 92, 962, 992 |
| Bse118I | RCCGGY | 1 cut(s) | 964 |
| Bse1I | ACTGG | 5 cut(s) | 155, 657, 713, 776, 839 |
| BseDI | CCNNGG | 1 cut(s) | 60 |
| BseGI | GGATG | 4 cut(s) | 178, 235, 292, 824 |
| BseNI | ACTGG | 5 cut(s) | 155, 657, 713, 776, 839 |
| BseSI | GKGCMC | 2 cut(s) | 162, 405 |
| BsiHKAI | GWGCWC | 2 cut(s) | 162, 405 |
| BsiSI | CCGG | 7 cut(s) | 215, 272, 329, 398, 454, 462, 965 |
| BslFI | GGGAC | 1 cut(s) | 19 |
| BsmAI | GTCTC | 3 cut(s) | 541, 643, 906 |
| BsmFI | GGGAC | 1 cut(s) | 19 |
| Bsp1286I | GDGCHC | 2 cut(s) | 162, 405 |
| BspMI | ACCTGC | 1 cut(s) | 103 |
| BsrFI | RCCGGY | 1 cut(s) | 964 |
| BsrI | ACTGG | 5 cut(s) | 155, 657, 713, 776, 839 |
| BssAI | RCCGGY | 1 cut(s) | 964 |
| BssECI | CCNNGG | 1 cut(s) | 60 |
| BstDEI | CTNAG | 9 cut(s) | 207, 264, 321, 345, 390, 413, 446, 705, 855 |
| BstF5I | GGATG | 4 cut(s) | 178, 235, 292, 824 |
| BstMAI | GTCTC | 3 cut(s) | 541, 643, 906 |
| BstSLI | GKGCMC | 2 cut(s) | 162, 405 |
| BstV2I | GAAGAC | 1 cut(s) | 17 |
| BtsCI | GGATG | 4 cut(s) | 178, 235, 292, 824 |
| BtsIMutI | CAGTG | 3 cut(s) | 162, 783, 846 |
| BveI | ACCTGC | 1 cut(s) | 103 |
| Cfr10I | RCCGGY | 1 cut(s) | 964 |
| Cfr13I | GGNCC | 1 cut(s) | 456 |
| Csp6I | GTAC | 5 cut(s) | 220, 277, 334, 467, 844 |
| CviQI | GTAC | 5 cut(s) | 220, 277, 334, 467, 844 |
| DdeI | CTNAG | 9 cut(s) | 207, 264, 321, 345, 390, 413, 446, 705, 855 |
| Eco47I | GGWCC | 1 cut(s) | 456 |
| FaiI | YATR | 2 cut(s) | 524, 626 |
| FaqI | GGGAC | 1 cut(s) | 19 |
| FblI | GTMKAC | 2 cut(s) | 661, 717 |
| Fnu4HI | GCNGC | 8 cut(s) | 131, 134, 137, 140, 143, 146, 149, 152 |
| FokI | GGATG | 4 cut(s) | 165, 222, 279, 811 |
| Fsp4HI | GCNGC | 8 cut(s) | 131, 134, 137, 140, 143, 146, 149, 152 |
| FspBI | CTAG | 3 cut(s) | 14, 29, 1006 |
| GluI | GCNGC | 8 cut(s) | 131, 134, 137, 140, 143, 146, 149, 152 |
| HapII | CCGG | 7 cut(s) | 215, 272, 329, 398, 454, 462, 965 |
| HpaII | CCGG | 7 cut(s) | 215, 272, 329, 398, 454, 462, 965 |
| HpyAV | CCTTC | 1 cut(s) | 55 |
| HpyCH4V | TGCA | 2 cut(s) | 160, 403 |
| HpyF3I | CTNAG | 9 cut(s) | 207, 264, 321, 345, 390, 413, 446, 705, 855 |
| LweI | GCATC | 2 cut(s) | 244, 301 |
| MaeI | CTAG | 3 cut(s) | 14, 29, 1006 |
| MaeIII | GTNAC | 9 cut(s) | 120, 198, 255, 312, 381, 437, 696, 816, 879 |
| MboII | GAAGA | 1 cut(s) | 17 |
| MhlI | GDGCHC | 2 cut(s) | 162, 405 |
| MspI | CCGG | 7 cut(s) | 215, 272, 329, 398, 454, 462, 965 |
| NmeAIII | GCCGAG | 1 cut(s) | 41 |
| NmuCI | GTSAC | 9 cut(s) | 120, 198, 255, 312, 381, 437, 696, 816, 879 |
| PaqCI | CACCTGC | 1 cut(s) | 103 |
| PkrI | GCNGC | 8 cut(s) | 132, 135, 138, 141, 144, 147, 150, 153 |
| PspPI | GGNCC | 1 cut(s) | 456 |
| RsaI | GTAC | 5 cut(s) | 221, 278, 335, 468, 845 |
| RsaNI | GTAC | 5 cut(s) | 220, 277, 334, 467, 844 |
| SatI | GCNGC | 8 cut(s) | 131, 134, 137, 140, 143, 146, 149, 152 |
| Sau96I | GGNCC | 1 cut(s) | 456 |
| SduI | GDGCHC | 2 cut(s) | 162, 405 |
| SetI | ASST | 9 cut(s) | 62, 97, 491, 497, 674, 706, 856, 889, 988 |
| SfaNI | GCATC | 2 cut(s) | 244, 301 |
| SinI | GGWCC | 1 cut(s) | 456 |
| SspMI | CTAG | 3 cut(s) | 14, 29, 1006 |
| TatI | WGTACW | 4 cut(s) | 219, 276, 333, 843 |
| TauI | GCSGC | 8 cut(s) | 133, 136, 139, 142, 145, 148, 151, 154 |
| TscAI | CASTG | 3 cut(s) | 162, 783, 846 |
| TseFI | GTSAC | 9 cut(s) | 120, 198, 255, 312, 381, 437, 696, 816, 879 |
| Tsp45I | GTSAC | 9 cut(s) | 120, 198, 255, 312, 381, 437, 696, 816, 879 |
| TspRI | CASTG | 3 cut(s) | 162, 783, 846 |
| VneI | GTGCAC | 2 cut(s) | 158, 401 |
| VpaK11BI | GGWCC | 1 cut(s) | 456 |
| XmiI | GTMKAC | 2 cut(s) | 661, 717 |
| XspI | CTAG | 3 cut(s) | 14, 29, 1006 |