FvH4_2g15930

f-box protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
13947768 .. 13952053
4286 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g15930.t2

Sequence Viewer

Length: 1290 bp
ATGGTAACAAAAAAGAAGAAGAACATATTAATAGGGGGGGCCCGAACTACATATATTTGTGGCGTTTGTGGCCAAATTGTTTCCCGGCAAACTGCCATGGCGGAGTGGTCTCTACTCCCTAAAGAGCTCCTGGAGGACATCGCCAAACGCCTCGGCAGCCCATTCTACCTCCTCCGTCTCCGATCCGTCTGCTCCTCCTGGCGCTCCTCATTCCCTCCCAGACCTCGCCGCTTCCCCTTCCTCACCAACTACGGCATCTCCGACTCCACCCTCGGCTTCCACCTCTCCAAACGCACCGTCTTCCTCCTCGCCTCTCCCAAATCCCCCGATCGCTGGCTCCTCAAGATCGAGGAGGACGTCCCCGGCCGATCGCACCTCCTCAACCCTCTCTCTCGCTCCTCCCCCTATCCTCTGCCGGAGACTTTCCCCAAGGTACTGGATTTGTCTAGGTTTAGGGTTTTCGATTTGGGAGAGGAGTATGTTCTGCATCATGTGAATTTCAGGCCGTTGGTTAATGCTTTGGGCGGTGCTGCCAATTTGTATAGGGAGAAAGTTGTGTTCATGTGTTTGGGAGATGAGAGCAGTGATTACGTGTTGCTTACGATTCATGTGTCTGGGGAATTGGCTTTGTTTAACTCTGTGGAGAAGAGGTGGACTATAATTCATGAAATGCCGTCACCTTATGATGATGTTATATTGTTTAGGGGTCAGTTTTATGCTGTTGATGGCACAGGGAGGACTGTGAGGGTTGGATTGGACTCGAGGAGCCCCAGTTTGGCTGCCAATCCGGTGTATGGCGGCGACAAGAAGTTTTTGGTGGAGTCGAGTGGGGAGCTGTTGGTGGTGGATATGTACTTGAGTGATGATCAGGTGGATTGGGACGCGGAGGATGAAGTGTCTCAGGTGCAGTTGAATGGGTGCATTTACGAGAGGACGGTGAGGTTTAAGGTTTATAAGGTGGATGAAGGAGGGCAGAAGTTGGCGAGGATGAAGAGCTTGGGGGATAGGGTGTTGTTTTTGGGGGATGACTGCACCTTTTCTGCCTCGGCTTCGGAGTTGGCTGGTTGTAAAGGGAATTGTATATTTTTTATGGATAATTTCTTCTATACGAGTGGGGAAGAAGAAGGGACGTACAAGGGTCGTGATATAGGTGTGTTTGACTTGGATAGGGGTGCTATTACCCCCTTATCTGATTATCCAGAGGCTGCAAAGCTATTTTGGCCACCCCCTGAGTGGGTTTCACAGACAACATCTCAGGTGCAAACCGAGTTTGAAGGGCTAGCTTTGTGA

Protein Analysis

430

Amino Acids

48.25

Weight (kDa)

5.69

Isoelectric Point (pI)

49.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 108 - 387 6.9e-49 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 954
AatII GACGTC 1 cut(s) 360
AccII CGCG 1 cut(s) 884
AciI CCGC 5 cut(s) 101, 229, 525, 798, 884
AclWI GGATC 1 cut(s) 177
AcoI YGGCCR 3 cut(s) 70, 364, 1220
AcsI RAATTY 1 cut(s) 496
AcyI GRCGYC 1 cut(s) 357
AfaI GTAC 3 cut(s) 435, 854, 1133
AfiI CCNNNNNNNGG 5 cut(s) 333, 775, 794, 1233, 1234
AflIII ACRYGT 1 cut(s) 591
AgsI TTSAA 2 cut(s) 913, 1274
AjnI CCWGG 2 cut(s) 129, 197
AluBI AGCT 5 cut(s) 127, 835, 996, 1213, 1283
AluI AGCT 5 cut(s) 127, 835, 996, 1213, 1283
Alw21I GWGCWC 1 cut(s) 129
Alw26I GTCTC 4 cut(s) 114, 182, 413, 903
AlwI GGATC 1 cut(s) 177
AlwNI CAGNNNCTG 1 cut(s) 1205
Ama87I CYCGRG 1 cut(s) 760
AoxI GGCC 5 cut(s) 39, 70, 364, 503, 1220
ApaI GGGCCC 1 cut(s) 43
ApeKI GCWGC 4 cut(s) 156, 530, 779, 1205
ApoI RAATTY 1 cut(s) 496
ArsI GACNNNNNNTTYG 2 cut(s) 282, 314
AseI ATTAAT 1 cut(s) 29
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 2 cut(s) 39, 40
AsuC2I CCSGG 2 cut(s) 85, 363
AsuHPI GGTGA 3 cut(s) 235, 669, 949
AsuNHI GCTAGC 1 cut(s) 1279
AvaI CYCGRG 1 cut(s) 760
BaeGI GKGCMC 1 cut(s) 43
BalI TGGCCA 2 cut(s) 72, 1222
BanII GRGCYC 3 cut(s) 43, 129, 770
BbsI GAAGAC 1 cut(s) 292
Bbv12I GWGCWC 1 cut(s) 129
BbvI GCAGC 4 cut(s) 168, 517, 766, 1192
BccI CCATC 1 cut(s) 719
BceAI ACGGC 3 cut(s) 268, 490, 658
BcgI CGANNNNNNTGC 2 cut(s) 171, 205
BciT130I CCWGG 2 cut(s) 131, 199
BclI TGATCA 1 cut(s) 865
BcnI CCSGG 2 cut(s) 85, 363
BcoDI GTCTC 4 cut(s) 114, 182, 413, 903
BfaI CTAG 2 cut(s) 447, 1280
BfoI RGCGCY 1 cut(s) 205
BisI GCNGC 6 cut(s) 157, 229, 531, 780, 799, 1206
BlsI GCNGC 6 cut(s) 158, 230, 532, 781, 800, 1207
Bme1390I CCNGG 4 cut(s) 85, 131, 199, 363
BmeT110I CYCGRG 1 cut(s) 760
BmgT120I GGNCC 2 cut(s) 39, 40
BmiI GGNNCC 4 cut(s) 40, 41, 338, 767
BmrFI CCNGG 4 cut(s) 85, 131, 199, 363
BmrI ACTGGG 1 cut(s) 765
BmsI GCATC 2 cut(s) 264, 496
BmtI GCTAGC 1 cut(s) 1283
BmuI ACTGGG 1 cut(s) 765
BpiI GAAGAC 1 cut(s) 292
BpmI CTGGAG 1 cut(s) 152
BpuEI CTTGAG 2 cut(s) 326, 877
BpuMI CCSGG 2 cut(s) 85, 363
BsaAI YACGTR 1 cut(s) 592
BsaHI GRCGYC 1 cut(s) 357
BsaI GGTCTC 1 cut(s) 114
BsaJI CCNNGG 6 cut(s) 96, 151, 271, 361, 429, 1044
BsaWI WCCGGW 1 cut(s) 787
BsaXI ACNNNNNCTCC 6 cut(s) 242, 272, 635, 665, 757, 787
Bsc4I CCNNNNNNNGG 5 cut(s) 333, 775, 794, 1233, 1234
Bse1I ACTGG 2 cut(s) 441, 771
BseBI CCWGG 2 cut(s) 131, 199
BseDI CCNNGG 6 cut(s) 96, 151, 271, 361, 429, 1044
BseGI GGATG 4 cut(s) 895, 967, 993, 1030
BseLI CCNNNNNNNGG 5 cut(s) 333, 775, 794, 1233, 1234
BseMII CTCAG 3 cut(s) 914, 1221, 1268
BseNI ACTGG 2 cut(s) 441, 771
BseSI GKGCMC 1 cut(s) 43
BseX3I CGGCCG 1 cut(s) 364
BseXI GCAGC 4 cut(s) 168, 517, 766, 1192
BsgI GTGCAG 2 cut(s) 926, 1015
Bsh1236I CGCG 1 cut(s) 884
Bsh1285I CGRYCG 3 cut(s) 331, 367, 371
BshFI GGCC 5 cut(s) 41, 72, 366, 505, 1222
BsiEI CGRYCG 3 cut(s) 331, 367, 371
BsiHKAI GWGCWC 1 cut(s) 129
BsiHKCI CYCGRG 1 cut(s) 760
BsiSI CCGG 4 cut(s) 85, 363, 416, 788
BslFI GGGAC 3 cut(s) 344, 893, 1141
BslI CCNNNNNNNGG 5 cut(s) 333, 775, 794, 1233, 1234
BsmAI GTCTC 4 cut(s) 114, 182, 413, 903
BsmBI CGTCTC 1 cut(s) 182
BsmFI GGGAC 3 cut(s) 344, 893, 1141
BsnI GGCC 5 cut(s) 41, 72, 366, 505, 1222
Bso31I GGTCTC 1 cut(s) 114
BsoBI CYCGRG 1 cut(s) 760
Bsp120I GGGCCC 1 cut(s) 39
Bsp1286I GDGCHC 3 cut(s) 43, 129, 770
Bsp143I GATC 5 cut(s) 182, 328, 345, 368, 865
Bsp19I CCATGG 1 cut(s) 96
BspACI CCGC 5 cut(s) 101, 229, 525, 798, 884
BspANI GGCC 5 cut(s) 41, 72, 366, 505, 1222
BspCNI CTCAG 3 cut(s) 913, 1222, 1267
BspFNI CGCG 1 cut(s) 884
BspHI TCATGA 1 cut(s) 664
BspLI GGNNCC 4 cut(s) 40, 41, 338, 767
BspOI GCTAGC 1 cut(s) 1283
BspPI GGATC 1 cut(s) 177
BspQI GCTCTTC 1 cut(s) 986
BspTNI GGTCTC 1 cut(s) 114
BsrI ACTGG 2 cut(s) 441, 771
BssECI CCNNGG 6 cut(s) 96, 151, 271, 361, 429, 1044
BssMI GATC 5 cut(s) 182, 328, 345, 368, 865
BssNI GRCGYC 1 cut(s) 357
BssT1I CCWWGG 2 cut(s) 96, 429
Bst2UI CCWGG 2 cut(s) 131, 199
Bst4CI ACNGT 3 cut(s) 298, 742, 937
Bst6I CTCTTC 2 cut(s) 641, 986
BstACI GRCGYC 1 cut(s) 357
BstBAI YACGTR 1 cut(s) 592
BstC8I GCNNGC 2 cut(s) 335, 1281
BstDEI CTNAG 3 cut(s) 900, 1230, 1254
BstDSI CCRYGG 1 cut(s) 96
BstF5I GGATG 4 cut(s) 895, 967, 993, 1030
BstFNI CGCG 1 cut(s) 884
BstH2I RGCGCY 1 cut(s) 205
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 5 cut(s) 185, 331, 348, 371, 868
BstMAI GTCTC 4 cut(s) 114, 182, 413, 903
BstMBI GATC 5 cut(s) 182, 328, 345, 368, 865
BstMCI CGRYCG 3 cut(s) 331, 367, 371
BstMWI GCNNNNNNNGC 3 cut(s) 69, 156, 1219
BstNI CCWGG 2 cut(s) 131, 199
BstSCI CCNGG 4 cut(s) 83, 129, 197, 361
BstSLI GKGCMC 1 cut(s) 43
BstUI CGCG 1 cut(s) 884
BstV1I GCAGC 4 cut(s) 168, 517, 766, 1192
BstV2I GAAGAC 1 cut(s) 292
BstXI CCANNNNNNTGG 1 cut(s) 436
BstZI CGGCCG 1 cut(s) 364
BsuRI GGCC 5 cut(s) 41, 72, 366, 505, 1222
BtgI CCRYGG 1 cut(s) 96
BtgZI GCGATG 1 cut(s) 124
BtsCI GGATG 4 cut(s) 895, 967, 993, 1030
BtsI GCAGTG 1 cut(s) 589
BtsIMutI CAGTG 1 cut(s) 589
Cac8I GCNNGC 2 cut(s) 335, 1281
CaiI CAGNNNCTG 1 cut(s) 1205
CciI TCATGA 1 cut(s) 664
CfoI GCGC 1 cut(s) 204
Cfr13I GGNCC 2 cut(s) 39, 40
CseI GACGC 1 cut(s) 890
Csp6I GTAC 3 cut(s) 434, 853, 1132
CviAII CATG 5 cut(s) 97, 491, 562, 608, 665
CviQI GTAC 3 cut(s) 434, 853, 1132
DdeI CTNAG 3 cut(s) 900, 1230, 1254
DpnI GATC 5 cut(s) 184, 330, 347, 370, 867
DpnII GATC 5 cut(s) 182, 328, 345, 368, 865
EaeI YGGCCR 3 cut(s) 70, 364, 1220
EagI CGGCCG 1 cut(s) 364
Eam1104I CTCTTC 2 cut(s) 641, 986
EarI CTCTTC 2 cut(s) 641, 986
EciI GGCGGA 1 cut(s) 116
Ecl136II GAGCTC 1 cut(s) 127
EclXI CGGCCG 1 cut(s) 364
Eco130I CCWWGG 2 cut(s) 96, 429
Eco24I GRGCYC 3 cut(s) 43, 129, 770
Eco31I GGTCTC 1 cut(s) 114
Eco52I CGGCCG 1 cut(s) 364
Eco53kI GAGCTC 1 cut(s) 127
Eco88I CYCGRG 1 cut(s) 760
EcoICRI GAGCTC 1 cut(s) 127
EcoO109I RGGNCCY 1 cut(s) 39
EcoRII CCWGG 2 cut(s) 129, 197
EcoT14I CCWWGG 2 cut(s) 96, 429
EcoT38I GRGCYC 3 cut(s) 43, 129, 770
ErhI CCWWGG 2 cut(s) 96, 429
Esp3I CGTCTC 1 cut(s) 182
FaeI CATG 5 cut(s) 100, 494, 565, 611, 668
FaqI GGGAC 3 cut(s) 344, 893, 1141
FatI CATG 5 cut(s) 96, 490, 561, 607, 664
FbaI TGATCA 1 cut(s) 865
Fnu4HI GCNGC 6 cut(s) 157, 229, 531, 780, 799, 1206
FokI GGATG 4 cut(s) 902, 974, 1000, 1037
FriOI GRGCYC 3 cut(s) 43, 129, 770
Fsp4HI GCNGC 6 cut(s) 157, 229, 531, 780, 799, 1206
FspBI CTAG 2 cut(s) 447, 1280
GlaI GCGC 1 cut(s) 203
GluI GCNGC 6 cut(s) 157, 229, 531, 780, 799, 1206
GsuI CTGGAG 1 cut(s) 152
HaeII RGCGCY 1 cut(s) 205
HaeIII GGCC 5 cut(s) 41, 72, 366, 505, 1222
HapII CCGG 4 cut(s) 85, 363, 416, 788
HgaI GACGC 1 cut(s) 890
HhaI GCGC 1 cut(s) 204
Hin1I GRCGYC 1 cut(s) 357
Hin1II CATG 5 cut(s) 100, 494, 565, 611, 668
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HinfI GANTC 4 cut(s) 263, 604, 758, 821
HpaII CCGG 4 cut(s) 85, 363, 416, 788
HphI GGTGA 3 cut(s) 235, 669, 949
Hpy166II GTNNAC 1 cut(s) 654
Hpy188I TCNGA 4 cut(s) 182, 262, 1054, 1192
Hpy188III TCNNGA 4 cut(s) 343, 665, 1142, 1199
Hpy8I GTNNAC 1 cut(s) 654
HpyAV CCTTC 4 cut(s) 247, 959, 1118, 1268
HpyCH4III ACNGT 3 cut(s) 298, 742, 937
HpyCH4IV ACGT 3 cut(s) 357, 591, 1130
HpyCH4V TGCA 6 cut(s) 487, 907, 921, 1032, 1208, 1261
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 156, 1219
HpyF3I CTNAG 3 cut(s) 900, 1230, 1254
HpySE526I ACGT 3 cut(s) 357, 591, 1130
Hsp92I GRCGYC 1 cut(s) 357
Hsp92II CATG 5 cut(s) 100, 494, 565, 611, 668
HspAI GCGC 1 cut(s) 202
Ksp22I TGATCA 1 cut(s) 865
Kzo9I GATC 5 cut(s) 182, 328, 345, 368, 865
LguI GCTCTTC 1 cut(s) 986
LmnI GCTCC 7 cut(s) 132, 197, 209, 342, 401, 765, 832
Lsp1109I GCAGC 4 cut(s) 168, 517, 766, 1192
LweI GCATC 2 cut(s) 264, 496
MaeI CTAG 2 cut(s) 447, 1280
MaeII ACGT 3 cut(s) 357, 591, 1130
MaeIII GTNAC 2 cut(s) 4, 675
MalI GATC 5 cut(s) 184, 330, 347, 370, 867
MboI GATC 5 cut(s) 182, 328, 345, 368, 865
MboII GAAGA 8 cut(s) 28, 31, 292, 658, 1003, 1093, 1130, 1133
MhlI GDGCHC 3 cut(s) 43, 129, 770
MlsI TGGCCA 2 cut(s) 72, 1222
MluCI AATT 7 cut(s) 75, 496, 535, 620, 660, 1075, 1096
MluNI TGGCCA 2 cut(s) 72, 1222
MlyI GAGTC 3 cut(s) 257, 752, 830
MmeI TCCRAC 2 cut(s) 285, 730
Mox20I TGGCCA 2 cut(s) 72, 1222
MscI TGGCCA 2 cut(s) 72, 1222
MseI TTAA 4 cut(s) 29, 513, 633, 945
Msp20I TGGCCA 2 cut(s) 72, 1222
MspI CCGG 4 cut(s) 85, 363, 416, 788
MspR9I CCNGG 4 cut(s) 85, 131, 199, 363
MvaI CCWGG 2 cut(s) 131, 199
MvnI CGCG 1 cut(s) 884
MwoI GCNNNNNNNGC 3 cut(s) 69, 156, 1219
NciI CCSGG 2 cut(s) 85, 363
NcoI CCATGG 1 cut(s) 96
NdeII GATC 5 cut(s) 182, 328, 345, 368, 865
NheI GCTAGC 1 cut(s) 1279
NlaIII CATG 5 cut(s) 100, 494, 565, 611, 668
NlaIV GGNNCC 4 cut(s) 40, 41, 338, 767
NmeAIII GCCGAG 3 cut(s) 132, 252, 1025
NmuCI GTSAC 1 cut(s) 675
PaeR7I CTCGAG 1 cut(s) 760
PagI TCATGA 1 cut(s) 664
PciSI GCTCTTC 1 cut(s) 986
PcsI WCGNNNNNNNCGW 2 cut(s) 258, 354
PfeI GAWTC 1 cut(s) 604
PfoI TCCNGGA 1 cut(s) 129
PkrI GCNGC 6 cut(s) 158, 230, 532, 781, 800, 1207
Ple19I CGATCG 2 cut(s) 331, 371
PleI GAGTC 3 cut(s) 257, 752, 829
PpsI GAGTC 3 cut(s) 257, 752, 829
Ppu21I YACGTR 1 cut(s) 592
PshBI ATTAAT 1 cut(s) 29
PsiI TTATAA 1 cut(s) 954
Psp124BI GAGCTC 1 cut(s) 129
Psp6I CCWGG 2 cut(s) 129, 197
PspGI CCWGG 2 cut(s) 129, 197
PspN4I GGNNCC 4 cut(s) 40, 41, 338, 767
PspOMI GGGCCC 1 cut(s) 39
PspPI GGNCC 2 cut(s) 39, 40
PspXI VCTCGAGB 1 cut(s) 760
PstNI CAGNNNCTG 1 cut(s) 1205
PvuI CGATCG 2 cut(s) 331, 371
RsaI GTAC 3 cut(s) 435, 854, 1133
RsaNI GTAC 3 cut(s) 434, 853, 1132
SacI GAGCTC 1 cut(s) 129
SapI GCTCTTC 1 cut(s) 986
SaqAI TTAA 4 cut(s) 29, 513, 633, 945
SatI GCNGC 6 cut(s) 157, 229, 531, 780, 799, 1206
Sau3AI GATC 5 cut(s) 182, 328, 345, 368, 865
Sau96I GGNCC 2 cut(s) 39, 40
SchI GAGTC 3 cut(s) 257, 752, 830
ScrFI CCNGG 4 cut(s) 85, 131, 199, 363
SduI GDGCHC 3 cut(s) 43, 129, 770
SfaNI GCATC 2 cut(s) 264, 496
Sfr274I CTCGAG 1 cut(s) 760
SlaI CTCGAG 1 cut(s) 760
SmlI CTYRAG 3 cut(s) 341, 760, 856
SmoI CTYRAG 3 cut(s) 341, 760, 856
Sse9I AATT 7 cut(s) 75, 496, 535, 620, 660, 1075, 1096
SsiI CCGC 5 cut(s) 101, 229, 525, 798, 884
SspMI CTAG 2 cut(s) 447, 1280
SstI GAGCTC 1 cut(s) 129
StyD4I CCNGG 4 cut(s) 83, 129, 197, 361
StyI CCWWGG 2 cut(s) 96, 429
TaaI ACNGT 3 cut(s) 298, 742, 937
TaiI ACGT 3 cut(s) 360, 594, 1133
TaqI TCGA 4 cut(s) 348, 462, 761, 824
TasI AATT 7 cut(s) 75, 496, 535, 620, 660, 1075, 1096
TatI WGTACW 1 cut(s) 852
TauI GCSGC 2 cut(s) 231, 801
TfiI GAWTC 1 cut(s) 604
Tru1I TTAA 4 cut(s) 29, 513, 633, 945
Tru9I TTAA 4 cut(s) 29, 513, 633, 945
TscAI CASTG 1 cut(s) 589
TseFI GTSAC 1 cut(s) 675
TseI GCWGC 4 cut(s) 156, 530, 779, 1205
Tsp45I GTSAC 1 cut(s) 675
TspDTI ATGAA 7 cut(s) 550, 596, 653, 681, 906, 978, 1004
TspGWI ACGGA 2 cut(s) 164, 175
TspRI CASTG 1 cut(s) 589
VspI ATTAAT 1 cut(s) 29
XapI RAATTY 1 cut(s) 496
XcmI CCANNNNNNNNNTGG 1 cut(s) 1230
XhoI CTCGAG 1 cut(s) 760
XspI CTAG 2 cut(s) 447, 1280
ZraI GACGTC 1 cut(s) 358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.